install(ok): /var/lib/condor/execute/dir_3197442/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3197442/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3197442/ds/sourcedata/raw]
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 00:41:06 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 00:41:06 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_3197442/ds/sub-182744/sub-182744_acq-headmotion2_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-182744/sub-182744_acq-headmotion2_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 69s
Affine preprocessing (APP)
Initialize 9s
Estimate background 8s
Initial correction 8s
Refine background 4s
Final correction 6s
Final scaling 9s
52s
Correct center-of-mass 6s
Affine registration 12s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
96s
SPM preprocessing 1 (estimate 2): 77s
SPM preprocessing 2 (write)
Write Segmentation 24s
Update Segmentation 17s
Update Skull-Stripping 48s
Update probability maps 10s
100s
Global intensity correction 18s
SANLM denoising after intensity normalization (medium) 18s
Fast Optimized Shooting registration 4s
112s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.00) 15s
Estimate local tissue thresholds (WM) 22s
Estimate local tissue thresholds (GM) 26s
Intensity transformation 0s
SANLM denoising after LAS (medium) 33s
108s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 19s
Ventricle detection 16s
Blood vessel detection 9s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.08) 77s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 4s
Final corrections 3s
139s
Apply enhanced blood vessel correction 2s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 35s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.06]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
13s
7s
Write result maps 2s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 4s
ROI estimation of 'cobra' atlas 15s
ROI estimation of 'neuromorphometrics' atlas 56s
ROI estimation of 'lpba40' atlas 16s
ROI estimation of 'hammers' atlas 42s
ROI estimation of 'thalamus' atlas 4s
ROI estimation of 'suit' atlas 11s
ROI estimation of 'ibsr' atlas 18s
ROI estimation of 'aal3' atlas 29s
ROI estimation of 'mori' atlas 44s
ROI estimation of 'anatomy3' atlas 62s
ROI estimation of 'julichbrain' atlas 83s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 12s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 35s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 62s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 115s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 145s
Write results 148s
757s
Quality check 16s
/var/lib/condor/execute/dir_3197442/ds/sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 33 minute(s) and 6 second(s).
Image Quality Rating (IQR): 75.95% (C)
GM volume (GMV): 47.15% (682.08 / 1446.54 ml)
Segmentations are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/mri
Reports are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/report
Labels are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/label
------------------------------------------------------------------------
22-Oct-2025 01:14:15 - Done 'CAT12: Segmentation'
22-Oct-2025 01:14:15 - Done
Bye for now...
get(ok): sourcedata/raw/sub-182744/anat/sub-182744_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...]
install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3197442/ds/code/cat12]
get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...]
run(ok): /var/lib/condor/execute/dir_3197442/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.mat (file)
add(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.xml (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/p0sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/wp0sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.mat (file)
add(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.xml (file)
add(ok): sub-182744/report/catlog_sub-182744_acq-headmotion2_T1w.txt (file)
add(ok): sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 14)
get (notneeded: 2, ok: 2)
install (ok: 1)
run (ok: 1)
save (ok: 1)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:15:08 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:15:09 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_3197442/ds/sub-182744/sub-182744_acq-standard_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-182744/sub-182744_acq-standard_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 74s
Affine preprocessing (APP)
Initialize 9s
Estimate background 8s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 6s
47s
Correct center-of-mass 6s
Affine registration 9s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
82s
SPM preprocessing 1 (estimate 2): 69s
SPM preprocessing 2 (write)
Write Segmentation 24s
Update Segmentation 17s
Update Skull-Stripping 49s
Update probability maps 10s
100s
Global intensity correction 18s
SANLM denoising after intensity normalization (medium) 21s
Fast Optimized Shooting registration 4s
111s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.00) 16s
Estimate local tissue thresholds (WM) 23s
Estimate local tissue thresholds (GM) 28s
Intensity transformation 0s
SANLM denoising after LAS (medium) 34s
114s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 21s
Ventricle detection 20s
Blood vessel detection 10s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.05) 78s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 5s
Final corrections 3s
147s
Apply enhanced blood vessel correction 2s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 36s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
14s
8s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 4s
ROI estimation of 'cobra' atlas 12s
ROI estimation of 'neuromorphometrics' atlas 50s
ROI estimation of 'lpba40' atlas 14s
ROI estimation of 'hammers' atlas 32s
ROI estimation of 'thalamus' atlas 4s
ROI estimation of 'suit' atlas 9s
ROI estimation of 'ibsr' atlas 15s
ROI estimation of 'aal3' atlas 23s
ROI estimation of 'mori' atlas 32s
ROI estimation of 'anatomy3' atlas 47s
ROI estimation of 'julichbrain' atlas 64s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 9s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 26s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 54s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 117s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 136s
Write results 138s
652s
Quality check 16s
/var/lib/condor/execute/dir_3197442/ds/sub-182744/report/catreport_sub-182744_acq-standard_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 30 minute(s) and 45 second(s).
Image Quality Rating (IQR): 87.43% (B+)
GM volume (GMV): 50.04% (742.88 / 1484.66 ml)
Segmentations are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/mri
Reports are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/report
Labels are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/label
------------------------------------------------------------------------
22-Oct-2025 01:45:56 - Done 'CAT12: Segmentation'
22-Oct-2025 01:45:56 - Done
Bye for now...
get(ok): sourcedata/raw/sub-182744/anat/sub-182744_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/p0sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-182744/mri/wp0sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_3197442/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-182744/label/catROI_sub-182744_acq-standard_T1w.mat (file)
add(ok): sub-182744/label/catROI_sub-182744_acq-standard_T1w.xml (file)
add(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/m0wp1sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/mri/mwp1sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/mri/p0sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/wp0sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/report/cat_sub-182744_acq-standard_T1w.mat (file)
add(ok): sub-182744/report/cat_sub-182744_acq-standard_T1w.xml (file)
add(ok): sub-182744/report/catlog_sub-182744_acq-standard_T1w.txt (file)
add(ok): sub-182744/report/catreport_sub-182744_acq-standard_T1w.pdf (file)
add(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/p0sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/wp0sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.mat (file)
add(ok): sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 25)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 11)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:46:55 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:46:56 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_3197442/ds/sub-182744/sub-182744_acq-headmotion1_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-182744/sub-182744_acq-headmotion1_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 70s
Affine preprocessing (APP)
Initialize 9s
Estimate background 8s
Initial correction 8s
Refine background 4s
Final correction 6s
Final scaling 7s
49s
Correct center-of-mass 8s
Affine registration 12s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
96s
SPM preprocessing 1 (estimate 2): 80s
SPM preprocessing 2 (write)
Write Segmentation 24s
Update Segmentation 16s
Update Skull-Stripping 47s
Update probability maps 11s
97s
Global intensity correction 17s
SANLM denoising after intensity normalization (medium) 18s
Fast Optimized Shooting registration 11s
116s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.05) 15s
Estimate local tissue thresholds (WM) 22s
Estimate local tissue thresholds (GM) 25s
Intensity transformation 0s
SANLM denoising after LAS (medium) 33s
106s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 19s
Ventricle detection 14s
Blood vessel detection 9s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 98s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 5s
Final corrections 3s
158s
Apply enhanced blood vessel correction 2s
Amap using initial SPM12 segmentations (MRF filter strength 0.07) 35s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.690.08,0.970.06]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
13s
11s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 4s
ROI estimation of 'cobra' atlas 13s
ROI estimation of 'neuromorphometrics' atlas 49s
ROI estimation of 'lpba40' atlas 14s
ROI estimation of 'hammers' atlas 35s
ROI estimation of 'thalamus' atlas 3s
ROI estimation of 'suit' atlas 8s
ROI estimation of 'ibsr' atlas 13s
ROI estimation of 'aal3' atlas 22s
ROI estimation of 'mori' atlas 32s
ROI estimation of 'anatomy3' atlas 47s
ROI estimation of 'julichbrain' atlas 57s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 7s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 23s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 44s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 69s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 88s
Write results 90s
530s
Quality check 14s
/var/lib/condor/execute/dir_3197442/ds/sub-182744/report/catreport_sub-182744_acq-headmotion1_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 30 minute(s) and 15 second(s).
Image Quality Rating (IQR): 87.91% (B+)
GM volume (GMV): 47.90% (675.34 / 1409.83 ml)
Segmentations are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/mri
Reports are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/report
Labels are saved in /var/lib/condor/execute/dir_3197442/ds/sub-182744/label
------------------------------------------------------------------------
22-Oct-2025 02:17:13 - Done 'CAT12: Segmentation'
22-Oct-2025 02:17:13 - Done
Bye for now...
get(ok): sourcedata/raw/sub-182744/anat/sub-182744_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-182744/label/catROI_sub-182744_acq-standard_T1w.mat (file)
unlock(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/m0wp1sub-182744_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/mwp1sub-182744_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/p0sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/p0sub-182744_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-182744/mri/wp0sub-182744_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-182744/mri/wp0sub-182744_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-182744/report/cat_sub-182744_acq-standard_T1w.mat (file)
unlock(ok): sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf (file)
unlock(ok): sub-182744/report/catreport_sub-182744_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_3197442/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-182744/label/catROI_sub-182744_acq-headmotion1_T1w.mat (file)
add(ok): sub-182744/label/catROI_sub-182744_acq-headmotion1_T1w.xml (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-182744/mri/p0sub-182744_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/wp0sub-182744_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-182744/report/cat_sub-182744_acq-headmotion1_T1w.mat (file)
add(ok): sub-182744/report/cat_sub-182744_acq-headmotion1_T1w.xml (file)
add(ok): sub-182744/report/catlog_sub-182744_acq-headmotion1_T1w.txt (file)
add(ok): sub-182744/report/catreport_sub-182744_acq-headmotion1_T1w.pdf (file)
add(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.mat (file)
add(ok): sub-182744/label/catROI_sub-182744_acq-standard_T1w.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/m0wp1sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/mwp1sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/mri/p0sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/p0sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-182744/mri/wp0sub-182744_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-182744/mri/wp0sub-182744_acq-standard_T1w.nii.gz (file)
add(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.mat (file)
add(ok): sub-182744/report/cat_sub-182744_acq-standard_T1w.mat (file)
add(ok): sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf (file)
add(ok): sub-182744/report/catreport_sub-182744_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 36)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 22)
copy(ok): sub-182744/label/catROI_sub-182744_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/label/catROI_sub-182744_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/label/catROI_sub-182744_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/it_sub-182744_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/it_sub-182744_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/it_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/it_sub-182744_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/m0wp1sub-182744_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/m0wp1sub-182744_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/mwp1sub-182744_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/mwp1sub-182744_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/p0sub-182744_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/p0sub-182744_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/p0sub-182744_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/t_sub-182744_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/t_sub-182744_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/t_sub-182744_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/t_sub-182744_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/wp0sub-182744_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/wp0sub-182744_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/mri/wp0sub-182744_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-182744/report/cat_sub-182744_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/report/cat_sub-182744_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/report/cat_sub-182744_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-182744/report/catreport_sub-182744_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-182744/report/catreport_sub-182744_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-182744/report/catreport_sub-182744_acq-standard_T1w.pdf (file) [to catqc_out-storage...]
action summary:
copy (ok: 33)
flock: getting lock took 0.000034 seconds
flock: executing git
SUCCESS