install(ok): /var/lib/condor/execute/dir_3197366/ds (dataset) install(ok): /var/lib/condor/execute/dir_3197366/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3197366/ds/sourcedata/raw] ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 00:41:08 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 00:41:08 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_3197366/ds/sub-337488/sub-337488_acq-standard_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-337488/sub-337488_acq-standard_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 71s Affine preprocessing (APP) Initialize 9s Estimate background 8s Initial correction 7s Refine background 4s Final correction 6s Final scaling 7s 47s Correct center-of-mass 6s Affine registration 9s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 88s SPM preprocessing 1 (estimate 2): 68s SPM preprocessing 2 (write) Write Segmentation 24s Update Segmentation 17s Update Skull-Stripping 49s Update probability maps 9s 99s Global intensity correction 18s SANLM denoising after intensity normalization (medium) 21s Fast Optimized Shooting registration 12s 120s Local adaptive segmentation (LASstr=0.50) Prepare maps 4s Prepare partitions 3s Prepare segments (LASmod = 1.08) 16s Estimate local tissue thresholds (WM) 23s Estimate local tissue thresholds (GM) 27s Intensity transformation 0s SANLM denoising after LAS (medium) 31s 107s ROI segmentation (partitioning) Atlas -> subject space 9s Major structures 19s Ventricle detection 19s Blood vessel detection 10s WMH detection (WMHCstr=0.50 > WMHCstr'=0.13) 76s Manual stroke lesion detection 0s Closing of deep structures 2s Side alignment 5s Final corrections 3s 143s Apply enhanced blood vessel correction 2s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 37s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 5s Level 1 cleanup (brain masking) 4s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 3s 14s 11s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 3s ROI estimation of 'cobra' atlas 11s ROI estimation of 'neuromorphometrics' atlas 40s ROI estimation of 'lpba40' atlas 16s ROI estimation of 'hammers' atlas 39s ROI estimation of 'thalamus' atlas 3s ROI estimation of 'suit' atlas 8s ROI estimation of 'ibsr' atlas 15s ROI estimation of 'aal3' atlas 23s ROI estimation of 'mori' atlas 33s ROI estimation of 'anatomy3' atlas 58s ROI estimation of 'julichbrain' atlas 82s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 11s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 34s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 69s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 134s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 202s Write results 208s 788s Quality check 19s /var/lib/condor/execute/dir_3197366/ds/sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 32 minute(s) and 46 second(s). Image Quality Rating (IQR): 87.91% (B+) GM volume (GMV): 45.79% (654.21 / 1428.57 ml) Segmentations are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/mri Reports are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/report Labels are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/label ------------------------------------------------------------------------ 22-Oct-2025 01:13:57 - Done 'CAT12: Segmentation' 22-Oct-2025 01:13:57 - Done Bye for now... get(ok): sourcedata/raw/sub-337488/anat/sub-337488_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...] install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3197366/ds/code/cat12] get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...] run(ok): /var/lib/condor/execute/dir_3197366/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.mat (file) add(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.xml (file) add(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/m0wp1sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/mwp1sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/p0sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/wp0sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.mat (file) add(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.xml (file) add(ok): sub-337488/report/catlog_sub-337488_acq-standard_T1w.txt (file) add(ok): sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 14) get (notneeded: 2, ok: 2) install (ok: 1) run (ok: 1) save (ok: 1) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:14:58 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:14:58 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_3197366/ds/sub-337488/sub-337488_acq-headmotion2_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-337488/sub-337488_acq-headmotion2_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 70s Affine preprocessing (APP) Initialize 8s Estimate background 8s Initial correction 7s Refine background 4s Final correction 6s Final scaling 6s 47s Correct center-of-mass 5s Affine registration 8s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 83s SPM preprocessing 1 (estimate 2): 71s SPM preprocessing 2 (write) Write Segmentation 24s Update Segmentation 16s Update Skull-Stripping 49s Update probability maps 10s 99s Global intensity correction 18s SANLM denoising after intensity normalization (medium) 19s Fast Optimized Shooting registration 7s 117s Local adaptive segmentation (LASstr=0.50) Prepare maps 4s Prepare partitions 4s Prepare segments (LASmod = 1.09) 16s Estimate local tissue thresholds (WM) 23s Estimate local tissue thresholds (GM) 26s Intensity transformation 0s SANLM denoising after LAS (medium) 30s 106s ROI segmentation (partitioning) Atlas -> subject space 9s Major structures 19s Ventricle detection 17s Blood vessel detection 9s WMH detection (WMHCstr=0.50 > WMHCstr'=0.13) 78s Manual stroke lesion detection 0s Closing of deep structures 2s Side alignment 4s Final corrections 3s 142s Apply enhanced blood vessel correction 2s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 36s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 5s Level 1 cleanup (brain masking) 4s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 3s 14s 11s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 3s ROI estimation of 'cobra' atlas 11s ROI estimation of 'neuromorphometrics' atlas 40s ROI estimation of 'lpba40' atlas 11s ROI estimation of 'hammers' atlas 30s ROI estimation of 'thalamus' atlas 2s ROI estimation of 'suit' atlas 7s ROI estimation of 'ibsr' atlas 11s ROI estimation of 'aal3' atlas 18s ROI estimation of 'mori' atlas 26s ROI estimation of 'anatomy3' atlas 38s ROI estimation of 'julichbrain' atlas 82s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 11s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 34s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 67s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 135s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 191s Write results 196s 723s Quality check 20s /var/lib/condor/execute/dir_3197366/ds/sub-337488/report/catreport_sub-337488_acq-headmotion2_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 31 minute(s) and 36 second(s). Image Quality Rating (IQR): 85.45% (B) GM volume (GMV): 44.65% (634.88 / 1421.87 ml) Segmentations are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/mri Reports are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/report Labels are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/label ------------------------------------------------------------------------ 22-Oct-2025 01:46:37 - Done 'CAT12: Segmentation' 22-Oct-2025 01:46:37 - Done Bye for now... get(ok): sourcedata/raw/sub-337488/anat/sub-337488_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.mat (file) unlock(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-337488/mri/m0wp1sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/mri/mwp1sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/mri/p0sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-337488/mri/wp0sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.mat (file) unlock(ok): sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_3197366/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-337488/label/catROI_sub-337488_acq-headmotion2_T1w.mat (file) add(ok): sub-337488/label/catROI_sub-337488_acq-headmotion2_T1w.xml (file) add(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/m0wp1sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/mwp1sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/p0sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/wp0sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/report/cat_sub-337488_acq-headmotion2_T1w.mat (file) add(ok): sub-337488/report/cat_sub-337488_acq-headmotion2_T1w.xml (file) add(ok): sub-337488/report/catlog_sub-337488_acq-headmotion2_T1w.txt (file) add(ok): sub-337488/report/catreport_sub-337488_acq-headmotion2_T1w.pdf (file) add(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/m0wp1sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/mwp1sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/p0sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/wp0sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.mat (file) add(ok): sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 25) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 11) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:47:44 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:47:44 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_3197366/ds/sub-337488/sub-337488_acq-headmotion1_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-337488/sub-337488_acq-headmotion1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 71s Affine preprocessing (APP) Initialize 8s Estimate background 8s Initial correction 7s Refine background 4s Final correction 6s Final scaling 6s 45s Correct center-of-mass 5s Affine registration 8s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 79s SPM preprocessing 1 (estimate 2): 64s SPM preprocessing 2 (write) Write Segmentation 23s Update Segmentation 16s Update Skull-Stripping 47s Update probability maps 9s 96s Global intensity correction 18s SANLM denoising after intensity normalization (medium) 19s Fast Optimized Shooting registration 11s 115s Local adaptive segmentation (LASstr=0.50) Prepare maps 4s Prepare partitions 2s Prepare segments (LASmod = 1.16) 15s Estimate local tissue thresholds (WM) 22s Estimate local tissue thresholds (GM) 26s Intensity transformation 0s SANLM denoising after LAS (medium) 30s 102s ROI segmentation (partitioning) Atlas -> subject space 9s Major structures 18s Ventricle detection 15s Blood vessel detection 9s WMH detection (WMHCstr=0.50 > WMHCstr'=0.13) 79s Manual stroke lesion detection 0s Closing of deep structures 2s Side alignment 5s Final corrections 3s 140s Apply enhanced blood vessel correction 2s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 35s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 5s Level 1 cleanup (brain masking) 4s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 3s 14s 11s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 3s ROI estimation of 'cobra' atlas 9s ROI estimation of 'neuromorphometrics' atlas 33s ROI estimation of 'lpba40' atlas 10s ROI estimation of 'hammers' atlas 23s ROI estimation of 'thalamus' atlas 2s ROI estimation of 'suit' atlas 5s ROI estimation of 'ibsr' atlas 10s ROI estimation of 'aal3' atlas 17s ROI estimation of 'mori' atlas 23s ROI estimation of 'anatomy3' atlas 34s ROI estimation of 'julichbrain' atlas 46s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 7s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 20s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 41s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 100s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 140s Write results 142s 524s Quality check 16s /var/lib/condor/execute/dir_3197366/ds/sub-337488/report/catreport_sub-337488_acq-headmotion1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 27 minute(s) and 37 second(s). Image Quality Rating (IQR): 87.01% (B+) GM volume (GMV): 44.43% (625.39 / 1407.57 ml) Segmentations are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/mri Reports are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/report Labels are saved in /var/lib/condor/execute/dir_3197366/ds/sub-337488/label ------------------------------------------------------------------------ 22-Oct-2025 02:15:25 - Done 'CAT12: Segmentation' 22-Oct-2025 02:15:25 - Done Bye for now... get(ok): sourcedata/raw/sub-337488/anat/sub-337488_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-337488/label/catROI_sub-337488_acq-headmotion2_T1w.mat (file) unlock(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.mat (file) unlock(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-337488/mri/m0wp1sub-337488_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-337488/mri/m0wp1sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/mri/mwp1sub-337488_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-337488/mri/mwp1sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/mri/p0sub-337488_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-337488/mri/p0sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-337488/mri/wp0sub-337488_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-337488/mri/wp0sub-337488_acq-standard_T1w.nii.gz (file) unlock(ok): sub-337488/report/cat_sub-337488_acq-headmotion2_T1w.mat (file) unlock(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.mat (file) unlock(ok): sub-337488/report/catreport_sub-337488_acq-headmotion2_T1w.pdf (file) unlock(ok): sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_3197366/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-337488/label/catROI_sub-337488_acq-headmotion1_T1w.mat (file) add(ok): sub-337488/label/catROI_sub-337488_acq-headmotion1_T1w.xml (file) add(ok): sub-337488/mri/it_sub-337488_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/m0wp1sub-337488_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-337488/mri/mwp1sub-337488_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-337488/mri/p0sub-337488_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-337488/mri/t_sub-337488_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/wp0sub-337488_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-337488/report/cat_sub-337488_acq-headmotion1_T1w.mat (file) add(ok): sub-337488/report/cat_sub-337488_acq-headmotion1_T1w.xml (file) add(ok): sub-337488/report/catlog_sub-337488_acq-headmotion1_T1w.txt (file) add(ok): sub-337488/report/catreport_sub-337488_acq-headmotion1_T1w.pdf (file) add(ok): sub-337488/label/catROI_sub-337488_acq-headmotion2_T1w.mat (file) add(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/m0wp1sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/m0wp1sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/mwp1sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/mwp1sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/p0sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/p0sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-337488/mri/wp0sub-337488_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-337488/mri/wp0sub-337488_acq-standard_T1w.nii.gz (file) add(ok): sub-337488/report/cat_sub-337488_acq-headmotion2_T1w.mat (file) add(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.mat (file) add(ok): sub-337488/report/catreport_sub-337488_acq-headmotion2_T1w.pdf (file) add(ok): sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 36) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 22) copy(ok): sub-337488/label/catROI_sub-337488_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/label/catROI_sub-337488_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/label/catROI_sub-337488_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/it_sub-337488_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/it_sub-337488_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/it_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/it_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/m0wp1sub-337488_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/m0wp1sub-337488_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/m0wp1sub-337488_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/mwp1sub-337488_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/mwp1sub-337488_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/mwp1sub-337488_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/p0sub-337488_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/p0sub-337488_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/p0sub-337488_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/t_sub-337488_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/t_sub-337488_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/t_sub-337488_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/t_sub-337488_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/wp0sub-337488_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/wp0sub-337488_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/mri/wp0sub-337488_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-337488/report/cat_sub-337488_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/report/cat_sub-337488_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/report/cat_sub-337488_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-337488/report/catreport_sub-337488_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-337488/report/catreport_sub-337488_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-337488/report/catreport_sub-337488_acq-standard_T1w.pdf (file) [to catqc_out-storage...] action summary: copy (ok: 33) flock: getting lock took 0.000057 seconds flock: executing git SUCCESS