install(ok): /var/lib/condor/execute/dir_1233926/ds (dataset)
install(ok): /var/lib/condor/execute/dir_1233926/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1233926/ds/sourcedata/raw]
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 00:40:29 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 00:40:30 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1233926/ds/sub-122916/sub-122916_acq-standard_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-122916/sub-122916_acq-standard_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 57s
Affine preprocessing (APP)
Initialize 8s
Estimate background 7s
Initial correction 6s
Refine background 4s
Final correction 5s
Final scaling 6s
41s
Correct center-of-mass 6s
Affine registration 8s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
7s
Use initial fine affine registration. 4s
Use previous fine affine registration. 63s
SPM preprocessing 1 (estimate 2): 56s
SPM preprocessing 2 (write)
Write Segmentation 19s
Update Segmentation 14s
Update Skull-Stripping 42s
Update probability maps 8s
84s
Global intensity correction 16s
SANLM denoising after intensity normalization (medium) 17s
Fast Optimized Shooting registration 3s
98s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 3s
Prepare partitions 4s
Prepare segments (LASmod = 1.03) 13s
Estimate local tissue thresholds (WM) 20s
Estimate local tissue thresholds (GM) 23s
Intensity transformation 0s
SANLM denoising after LAS (medium) 25s
91s
ROI segmentation (partitioning)
Atlas -> subject space 8s
Major structures 16s
Ventricle detection 15s
Blood vessel detection 8s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.01) 57s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 4s
Final corrections 3s
111s
No enhanced blood vessel correction is required 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 28s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.07,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 4s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 2s
11s
3s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 2s
ROI estimation of 'cobra' atlas 9s
ROI estimation of 'neuromorphometrics' atlas 35s
ROI estimation of 'lpba40' atlas 10s
ROI estimation of 'hammers' atlas 26s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 6s
ROI estimation of 'ibsr' atlas 10s
ROI estimation of 'aal3' atlas 17s
ROI estimation of 'mori' atlas 32s
ROI estimation of 'anatomy3' atlas 50s
ROI estimation of 'julichbrain' atlas 77s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 11s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 32s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 63s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 106s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 100s
Write results 102s
590s
Quality check 13s
/var/lib/condor/execute/dir_1233926/ds/sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 25 minute(s) and 20 second(s).
Image Quality Rating (IQR): 87.71% (B+)
GM volume (GMV): 47.49% (638.10 / 1343.56 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/mri
Reports are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/report
Labels are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/label
------------------------------------------------------------------------
22-Oct-2025 01:05:52 - Done 'CAT12: Segmentation'
22-Oct-2025 01:05:52 - Done
Bye for now...
get(ok): sourcedata/raw/sub-122916/anat/sub-122916_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...]
install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1233926/ds/code/cat12]
get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...]
run(ok): /var/lib/condor/execute/dir_1233926/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.mat (file)
add(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.xml (file)
add(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/m0wp1sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/mwp1sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/p0sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/wp0sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.mat (file)
add(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.xml (file)
add(ok): sub-122916/report/catlog_sub-122916_acq-standard_T1w.txt (file)
add(ok): sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 14)
get (notneeded: 2, ok: 2)
install (ok: 1)
run (ok: 1)
save (ok: 1)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:06:46 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:06:46 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1233926/ds/sub-122916/sub-122916_acq-headmotion1_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-122916/sub-122916_acq-headmotion1_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 58s
Affine preprocessing (APP)
Initialize 8s
Estimate background 7s
Initial correction 6s
Refine background 4s
Final correction 5s
Final scaling 5s
40s
Correct center-of-mass 5s
Affine registration 7s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
8s
Use initial fine affine registration. 67s
SPM preprocessing 1 (estimate 2): 59s
SPM preprocessing 2 (write)
Write Segmentation 20s
Update Segmentation 14s
Update Skull-Stripping 41s
Update probability maps 8s
83s
Global intensity correction 16s
SANLM denoising after intensity normalization (medium) 16s
Fast Optimized Shooting registration 5s
100s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 3s
Prepare partitions 2s
Prepare segments (LASmod = 1.07) 13s
Estimate local tissue thresholds (WM) 20s
Estimate local tissue thresholds (GM) 23s
Intensity transformation 0s
SANLM denoising after LAS (medium) 24s
88s
ROI segmentation (partitioning)
Atlas -> subject space 7s
Major structures 16s
Ventricle detection 14s
Blood vessel detection 8s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.01) 56s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 4s
Final corrections 3s
108s
No enhanced blood vessel correction is required 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 28s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 4s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 2s
11s
5s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 3s
ROI estimation of 'cobra' atlas 10s
ROI estimation of 'neuromorphometrics' atlas 36s
ROI estimation of 'lpba40' atlas 11s
ROI estimation of 'hammers' atlas 27s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 6s
ROI estimation of 'ibsr' atlas 10s
ROI estimation of 'aal3' atlas 17s
ROI estimation of 'mori' atlas 25s
ROI estimation of 'anatomy3' atlas 34s
ROI estimation of 'julichbrain' atlas 42s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 21s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 32s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 70s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 106s
Write results 108s
460s
Quality check 13s
/var/lib/condor/execute/dir_1233926/ds/sub-122916/report/catreport_sub-122916_acq-headmotion1_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 23 minute(s) and 17 second(s).
Image Quality Rating (IQR): 84.25% (B)
GM volume (GMV): 46.61% (618.93 / 1327.86 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/mri
Reports are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/report
Labels are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/label
------------------------------------------------------------------------
22-Oct-2025 01:30:06 - Done 'CAT12: Segmentation'
22-Oct-2025 01:30:06 - Done
Bye for now...
get(ok): sourcedata/raw/sub-122916/anat/sub-122916_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.mat (file)
unlock(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-122916/mri/m0wp1sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/mwp1sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/p0sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-122916/mri/wp0sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.mat (file)
unlock(ok): sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_1233926/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-122916/label/catROI_sub-122916_acq-headmotion1_T1w.mat (file)
add(ok): sub-122916/label/catROI_sub-122916_acq-headmotion1_T1w.xml (file)
add(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/m0wp1sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/mwp1sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/p0sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/wp0sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/report/cat_sub-122916_acq-headmotion1_T1w.mat (file)
add(ok): sub-122916/report/cat_sub-122916_acq-headmotion1_T1w.xml (file)
add(ok): sub-122916/report/catlog_sub-122916_acq-headmotion1_T1w.txt (file)
add(ok): sub-122916/report/catreport_sub-122916_acq-headmotion1_T1w.pdf (file)
add(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/m0wp1sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/mwp1sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/p0sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/wp0sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.mat (file)
add(ok): sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 25)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 11)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:31:01 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:31:01 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1233926/ds/sub-122916/sub-122916_acq-headmotion2_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-122916/sub-122916_acq-headmotion2_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 59s
Affine preprocessing (APP)
Initialize 8s
Estimate background 7s
Initial correction 6s
Refine background 4s
Final correction 6s
Final scaling 7s
44s
Correct center-of-mass 5s
Affine registration 8s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
7s
Use initial fine affine registration. 68s
SPM preprocessing 1 (estimate 2): 67s
SPM preprocessing 2 (write)
Write Segmentation 19s
Update Segmentation 14s
Update Skull-Stripping 40s
Update probability maps 8s
82s
Global intensity correction 16s
SANLM denoising after intensity normalization (medium) 15s
Fast Optimized Shooting registration 3s
95s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 3s
Prepare partitions 3s
Prepare segments (LASmod = 1.04) 12s
Estimate local tissue thresholds (WM) 19s
Estimate local tissue thresholds (GM) 22s
Intensity transformation 0s
SANLM denoising after LAS (medium) 25s
88s
ROI segmentation (partitioning)
Atlas -> subject space 7s
Major structures 15s
Ventricle detection 12s
Blood vessel detection 8s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.04) 64s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 4s
Final corrections 3s
114s
Apply enhanced blood vessel correction 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 28s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 4s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 2s
11s
10s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 3s
ROI estimation of 'cobra' atlas 9s
ROI estimation of 'neuromorphometrics' atlas 35s
ROI estimation of 'lpba40' atlas 10s
ROI estimation of 'hammers' atlas 22s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 5s
ROI estimation of 'ibsr' atlas 8s
ROI estimation of 'aal3' atlas 12s
ROI estimation of 'mori' atlas 17s
ROI estimation of 'anatomy3' atlas 24s
ROI estimation of 'julichbrain' atlas 30s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 13s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 24s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 53s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 72s
Write results 73s
346s
Quality check 12s
/var/lib/condor/execute/dir_1233926/ds/sub-122916/report/catreport_sub-122916_acq-headmotion2_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 21 minute(s) and 36 second(s).
Image Quality Rating (IQR): 86.17% (B)
GM volume (GMV): 45.54% (587.42 / 1289.97 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/mri
Reports are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/report
Labels are saved in /var/lib/condor/execute/dir_1233926/ds/sub-122916/label
------------------------------------------------------------------------
22-Oct-2025 01:52:40 - Done 'CAT12: Segmentation'
22-Oct-2025 01:52:40 - Done
Bye for now...
get(ok): sourcedata/raw/sub-122916/anat/sub-122916_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-122916/label/catROI_sub-122916_acq-headmotion1_T1w.mat (file)
unlock(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.mat (file)
unlock(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file)
unlock(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file)
unlock(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-122916/mri/m0wp1sub-122916_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/m0wp1sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/mwp1sub-122916_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/mwp1sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/p0sub-122916_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/p0sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file)
unlock(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file)
unlock(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-122916/mri/wp0sub-122916_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-122916/mri/wp0sub-122916_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-122916/report/cat_sub-122916_acq-headmotion1_T1w.mat (file)
unlock(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.mat (file)
unlock(ok): sub-122916/report/catreport_sub-122916_acq-headmotion1_T1w.pdf (file)
unlock(ok): sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_1233926/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-122916/label/catROI_sub-122916_acq-headmotion2_T1w.mat (file)
add(ok): sub-122916/label/catROI_sub-122916_acq-headmotion2_T1w.xml (file)
add(ok): sub-122916/mri/it_sub-122916_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/m0wp1sub-122916_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-122916/mri/mwp1sub-122916_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-122916/mri/p0sub-122916_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-122916/mri/t_sub-122916_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/wp0sub-122916_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-122916/report/cat_sub-122916_acq-headmotion2_T1w.mat (file)
add(ok): sub-122916/report/cat_sub-122916_acq-headmotion2_T1w.xml (file)
add(ok): sub-122916/report/catlog_sub-122916_acq-headmotion2_T1w.txt (file)
add(ok): sub-122916/report/catreport_sub-122916_acq-headmotion2_T1w.pdf (file)
add(ok): sub-122916/label/catROI_sub-122916_acq-headmotion1_T1w.mat (file)
add(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/m0wp1sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/m0wp1sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/mwp1sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/mwp1sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/p0sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/p0sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-122916/mri/wp0sub-122916_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-122916/mri/wp0sub-122916_acq-standard_T1w.nii.gz (file)
add(ok): sub-122916/report/cat_sub-122916_acq-headmotion1_T1w.mat (file)
add(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.mat (file)
add(ok): sub-122916/report/catreport_sub-122916_acq-headmotion1_T1w.pdf (file)
add(ok): sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 36)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 22)
copy(ok): sub-122916/label/catROI_sub-122916_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/label/catROI_sub-122916_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/label/catROI_sub-122916_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/it_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/it_sub-122916_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/it_sub-122916_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/it_sub-122916_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/m0wp1sub-122916_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/m0wp1sub-122916_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/m0wp1sub-122916_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/mwp1sub-122916_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/mwp1sub-122916_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/mwp1sub-122916_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/p0sub-122916_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/p0sub-122916_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/p0sub-122916_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/t_sub-122916_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/t_sub-122916_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/t_sub-122916_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/t_sub-122916_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/wp0sub-122916_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/wp0sub-122916_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/mri/wp0sub-122916_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-122916/report/cat_sub-122916_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/report/cat_sub-122916_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/report/cat_sub-122916_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-122916/report/catreport_sub-122916_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-122916/report/catreport_sub-122916_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-122916/report/catreport_sub-122916_acq-standard_T1w.pdf (file) [to catqc_out-storage...]
action summary:
copy (ok: 33)
flock: getting lock took 0.001303 seconds
flock: executing git
SUCCESS