install(ok): /var/lib/condor/execute/dir_1149332/ds (dataset) install(ok): /var/lib/condor/execute/dir_1149332/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1149332/ds/sourcedata/raw] ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 00:40:26 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 00:40:26 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_1149332/ds/sub-228373/sub-228373_acq-headmotion2_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-228373/sub-228373_acq-headmotion2_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 63s Affine preprocessing (APP) Initialize 7s Estimate background 7s Initial correction 7s Refine background 4s Final correction 6s Final scaling 6s 44s Correct center-of-mass 5s Affine registration 7s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 77s SPM preprocessing 1 (estimate 2): 65s SPM preprocessing 2 (write) Write Segmentation 20s Update Segmentation 14s Update Skull-Stripping 40s Update probability maps 8s 82s Global intensity correction 15s SANLM denoising after intensity normalization (medium) 15s Fast Optimized Shooting registration 4s 95s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 3s Prepare segments (LASmod = 1.26) 13s Estimate local tissue thresholds (WM) 18s Estimate local tissue thresholds (GM) 21s Intensity transformation 0s SANLM denoising after LAS (medium) 26s 87s ROI segmentation (partitioning) Atlas -> subject space 7s Major structures 15s Ventricle detection 15s Blood vessel detection 8s WMH detection (WMHCstr=0.50 > WMHCstr'=0.07) 54s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 4s Final corrections 2s 106s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.07) 28s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 4s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 11s 6s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 3s ROI estimation of 'cobra' atlas 10s ROI estimation of 'neuromorphometrics' atlas 43s ROI estimation of 'lpba40' atlas 14s ROI estimation of 'hammers' atlas 35s ROI estimation of 'thalamus' atlas 3s ROI estimation of 'suit' atlas 8s ROI estimation of 'ibsr' atlas 13s ROI estimation of 'aal3' atlas 21s ROI estimation of 'mori' atlas 31s ROI estimation of 'anatomy3' atlas 46s ROI estimation of 'julichbrain' atlas 61s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 9s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 25s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 49s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 93s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 99s Write results 101s 567s Quality check 13s /var/lib/condor/execute/dir_1149332/ds/sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 25 minute(s) and 54 second(s). Image Quality Rating (IQR): 84.63% (B) GM volume (GMV): 45.65% (593.95 / 1301.08 ml) Segmentations are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/mri Reports are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/report Labels are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/label ------------------------------------------------------------------------ 22-Oct-2025 01:06:23 - Done 'CAT12: Segmentation' 22-Oct-2025 01:06:23 - Done Bye for now... get(ok): sourcedata/raw/sub-228373/anat/sub-228373_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...] install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1149332/ds/code/cat12] get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...] run(ok): /var/lib/condor/execute/dir_1149332/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.mat (file) add(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.xml (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/p0sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/wp0sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.mat (file) add(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.xml (file) add(ok): sub-228373/report/catlog_sub-228373_acq-headmotion2_T1w.txt (file) add(ok): sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 14) get (notneeded: 2, ok: 2) install (ok: 1) run (ok: 1) save (ok: 1) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:07:04 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:07:04 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_1149332/ds/sub-228373/sub-228373_acq-standard_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-228373/sub-228373_acq-standard_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 64s Affine preprocessing (APP) Initialize 7s Estimate background 7s Initial correction 7s Refine background 3s Final correction 5s Final scaling 5s 40s Correct center-of-mass 5s Affine registration 7s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 75s SPM preprocessing 1 (estimate 2): 60s SPM preprocessing 2 (write) Write Segmentation 19s Update Segmentation 14s Update Skull-Stripping 40s Update probability maps 10s 83s Global intensity correction 15s SANLM denoising after intensity normalization (medium) 15s Fast Optimized Shooting registration 10s 99s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 3s Prepare segments (LASmod = 1.15) 12s Estimate local tissue thresholds (WM) 19s Estimate local tissue thresholds (GM) 22s Intensity transformation 0s SANLM denoising after LAS (medium) 27s 89s ROI segmentation (partitioning) Atlas -> subject space 7s Major structures 15s Ventricle detection 16s Blood vessel detection 8s WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 55s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 4s Final corrections 2s 110s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 28s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 4s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 2s 11s 9s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 3s ROI estimation of 'cobra' atlas 9s ROI estimation of 'neuromorphometrics' atlas 34s ROI estimation of 'lpba40' atlas 11s ROI estimation of 'hammers' atlas 27s ROI estimation of 'thalamus' atlas 2s ROI estimation of 'suit' atlas 6s ROI estimation of 'ibsr' atlas 10s ROI estimation of 'aal3' atlas 15s ROI estimation of 'mori' atlas 29s ROI estimation of 'anatomy3' atlas 43s ROI estimation of 'julichbrain' atlas 55s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 8s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 24s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 37s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 71s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 90s Write results 92s 475s Quality check 13s /var/lib/condor/execute/dir_1149332/ds/sub-228373/report/catreport_sub-228373_acq-standard_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 24 minute(s) and 16 second(s). Image Quality Rating (IQR): 88.02% (B+) GM volume (GMV): 48.57% (637.23 / 1311.97 ml) Segmentations are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/mri Reports are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/report Labels are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/label ------------------------------------------------------------------------ 22-Oct-2025 01:31:22 - Done 'CAT12: Segmentation' 22-Oct-2025 01:31:22 - Done Bye for now... get(ok): sourcedata/raw/sub-228373/anat/sub-228373_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.mat (file) unlock(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/p0sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-228373/mri/wp0sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.mat (file) unlock(ok): sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_1149332/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-228373/label/catROI_sub-228373_acq-standard_T1w.mat (file) add(ok): sub-228373/label/catROI_sub-228373_acq-standard_T1w.xml (file) add(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/m0wp1sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/mri/mwp1sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/mri/p0sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/wp0sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/report/cat_sub-228373_acq-standard_T1w.mat (file) add(ok): sub-228373/report/cat_sub-228373_acq-standard_T1w.xml (file) add(ok): sub-228373/report/catlog_sub-228373_acq-standard_T1w.txt (file) add(ok): sub-228373/report/catreport_sub-228373_acq-standard_T1w.pdf (file) add(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/p0sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/wp0sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.mat (file) add(ok): sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 25) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 11) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:32:11 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:32:11 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_1149332/ds/sub-228373/sub-228373_acq-headmotion1_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-228373/sub-228373_acq-headmotion1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 63s Affine preprocessing (APP) Initialize 7s Estimate background 7s Initial correction 7s Refine background 3s Final correction 5s Final scaling 6s 40s Correct center-of-mass 6s Affine registration 7s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 76s SPM preprocessing 1 (estimate 2): 61s SPM preprocessing 2 (write) Write Segmentation 20s Update Segmentation 14s Update Skull-Stripping 40s Update probability maps 8s 81s Global intensity correction 15s SANLM denoising after intensity normalization (medium) 15s Fast Optimized Shooting registration 9s 100s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 3s Prepare segments (LASmod = 1.28) 12s Estimate local tissue thresholds (WM) 19s Estimate local tissue thresholds (GM) 22s Intensity transformation 0s SANLM denoising after LAS (medium) 26s 89s ROI segmentation (partitioning) Atlas -> subject space 7s Major structures 16s Ventricle detection 19s Blood vessel detection 8s WMH detection (WMHCstr=0.50 > WMHCstr'=0.04) 56s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 4s Final corrections 3s 113s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 28s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 4s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 2s 11s 10s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 3s ROI estimation of 'cobra' atlas 9s ROI estimation of 'neuromorphometrics' atlas 32s ROI estimation of 'lpba40' atlas 9s ROI estimation of 'hammers' atlas 22s ROI estimation of 'thalamus' atlas 2s ROI estimation of 'suit' atlas 6s ROI estimation of 'ibsr' atlas 9s ROI estimation of 'aal3' atlas 14s ROI estimation of 'mori' atlas 16s ROI estimation of 'anatomy3' atlas 28s ROI estimation of 'julichbrain' atlas 32s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 14s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 29s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 61s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 85s Write results 87s 380s Quality check 12s /var/lib/condor/execute/dir_1149332/ds/sub-228373/report/catreport_sub-228373_acq-headmotion1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 23 minute(s) and 0 second(s). Image Quality Rating (IQR): 86.75% (B+) GM volume (GMV): 47.38% (621.98 / 1312.69 ml) Segmentations are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/mri Reports are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/report Labels are saved in /var/lib/condor/execute/dir_1149332/ds/sub-228373/label ------------------------------------------------------------------------ 22-Oct-2025 01:55:13 - Done 'CAT12: Segmentation' 22-Oct-2025 01:55:13 - Done Bye for now... get(ok): sourcedata/raw/sub-228373/anat/sub-228373_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.mat (file) unlock(ok): sub-228373/label/catROI_sub-228373_acq-standard_T1w.mat (file) unlock(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/m0wp1sub-228373_acq-standard_T1w.nii.gz (file) unlock(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/mwp1sub-228373_acq-standard_T1w.nii.gz (file) unlock(ok): sub-228373/mri/p0sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/p0sub-228373_acq-standard_T1w.nii.gz (file) unlock(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-228373/mri/wp0sub-228373_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-228373/mri/wp0sub-228373_acq-standard_T1w.nii.gz (file) unlock(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.mat (file) unlock(ok): sub-228373/report/cat_sub-228373_acq-standard_T1w.mat (file) unlock(ok): sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf (file) unlock(ok): sub-228373/report/catreport_sub-228373_acq-standard_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_1149332/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-228373/label/catROI_sub-228373_acq-headmotion1_T1w.mat (file) add(ok): sub-228373/label/catROI_sub-228373_acq-headmotion1_T1w.xml (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-228373/mri/p0sub-228373_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/wp0sub-228373_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-228373/report/cat_sub-228373_acq-headmotion1_T1w.mat (file) add(ok): sub-228373/report/cat_sub-228373_acq-headmotion1_T1w.xml (file) add(ok): sub-228373/report/catlog_sub-228373_acq-headmotion1_T1w.txt (file) add(ok): sub-228373/report/catreport_sub-228373_acq-headmotion1_T1w.pdf (file) add(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.mat (file) add(ok): sub-228373/label/catROI_sub-228373_acq-standard_T1w.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/m0wp1sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/mwp1sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/mri/p0sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/p0sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-228373/mri/wp0sub-228373_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-228373/mri/wp0sub-228373_acq-standard_T1w.nii.gz (file) add(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.mat (file) add(ok): sub-228373/report/cat_sub-228373_acq-standard_T1w.mat (file) add(ok): sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf (file) add(ok): sub-228373/report/catreport_sub-228373_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 36) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 22) copy(ok): sub-228373/label/catROI_sub-228373_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/label/catROI_sub-228373_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/label/catROI_sub-228373_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/it_sub-228373_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/it_sub-228373_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/it_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/it_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/m0wp1sub-228373_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/m0wp1sub-228373_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/mwp1sub-228373_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/mwp1sub-228373_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/p0sub-228373_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/p0sub-228373_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/p0sub-228373_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/t_sub-228373_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/t_sub-228373_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/t_sub-228373_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/t_sub-228373_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/wp0sub-228373_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/wp0sub-228373_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/mri/wp0sub-228373_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-228373/report/cat_sub-228373_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/report/cat_sub-228373_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/report/cat_sub-228373_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-228373/report/catreport_sub-228373_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-228373/report/catreport_sub-228373_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-228373/report/catreport_sub-228373_acq-standard_T1w.pdf (file) [to catqc_out-storage...] action summary: copy (ok: 33) flock: getting lock took 0.001041 seconds flock: executing git SUCCESS