install(ok): /var/lib/condor/execute/dir_1149267/ds (dataset)
install(ok): /var/lib/condor/execute/dir_1149267/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1149267/ds/sourcedata/raw]
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 00:40:51 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 00:40:51 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1149267/ds/sub-848092/sub-848092_acq-standard_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-848092/sub-848092_acq-standard_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 49s
Affine preprocessing (APP)
Initialize 7s
Estimate background 6s
Initial correction 6s
Refine background 4s
Final correction 5s
Final scaling 6s
40s
Correct center-of-mass 6s
Affine registration 8s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
68s
SPM preprocessing 1 (estimate 2): 53s
SPM preprocessing 2 (write)
Write Segmentation 19s
Update Segmentation 13s
Update Skull-Stripping 39s
Update probability maps 8s
79s
Global intensity correction 15s
SANLM denoising after intensity normalization (medium) 14s
Fast Optimized Shooting registration 7s
98s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 3s
Prepare partitions 3s
Prepare segments (LASmod = 1.10) 11s
Estimate local tissue thresholds (WM) 18s
Estimate local tissue thresholds (GM) 21s
Intensity transformation 0s
SANLM denoising after LAS (medium) 22s
82s
ROI segmentation (partitioning)
Atlas -> subject space 7s
Major structures 14s
Ventricle detection 12s
Blood vessel detection 7s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.01) 59s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 3s
Final corrections 2s
106s
No enhanced blood vessel correction is required 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 26s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 3s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 1s
Level 3 cleanup (CSF/WM PVE) 2s
10s
7s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 2s
ROI estimation of 'cobra' atlas 8s
ROI estimation of 'neuromorphometrics' atlas 30s
ROI estimation of 'lpba40' atlas 9s
ROI estimation of 'hammers' atlas 24s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 6s
ROI estimation of 'ibsr' atlas 9s
ROI estimation of 'aal3' atlas 15s
ROI estimation of 'mori' atlas 21s
ROI estimation of 'anatomy3' atlas 37s
ROI estimation of 'julichbrain' atlas 56s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 8s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 23s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 45s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 92s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 114s
Write results 116s
505s
Quality check 12s
/var/lib/condor/execute/dir_1149267/ds/sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 23 minute(s) and 25 second(s).
Image Quality Rating (IQR): 85.38% (B)
GM volume (GMV): 46.79% (559.99 / 1196.80 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/mri
Reports are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/report
Labels are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/label
------------------------------------------------------------------------
22-Oct-2025 01:04:18 - Done 'CAT12: Segmentation'
22-Oct-2025 01:04:18 - Done
Bye for now...
get(ok): sourcedata/raw/sub-848092/anat/sub-848092_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...]
install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1149267/ds/code/cat12]
get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...]
run(ok): /var/lib/condor/execute/dir_1149267/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.mat (file)
add(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.xml (file)
add(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/m0wp1sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/mwp1sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/p0sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/wp0sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.mat (file)
add(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.xml (file)
add(ok): sub-848092/report/catlog_sub-848092_acq-standard_T1w.txt (file)
add(ok): sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 14)
get (notneeded: 2, ok: 2)
install (ok: 1)
run (ok: 1)
save (ok: 1)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:05:09 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:05:09 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1149267/ds/sub-848092/sub-848092_acq-headmotion2_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-848092/sub-848092_acq-headmotion2_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 50s
Affine preprocessing (APP)
Initialize 7s
Estimate background 7s
Initial correction 6s
Refine background 4s
Final correction 5s
Final scaling 5s
39s
Correct center-of-mass 4s
Affine registration 9s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
66s
SPM preprocessing 1 (estimate 2): 60s
SPM preprocessing 2 (write)
Write Segmentation 19s
Update Segmentation 13s
Update Skull-Stripping 38s
Update probability maps 8s
78s
Global intensity correction 15s
SANLM denoising after intensity normalization (medium) 13s
Fast Optimized Shooting registration 4s
94s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 3s
Prepare partitions 2s
Prepare segments (LASmod = 1.00) 11s
Estimate local tissue thresholds (WM) 18s
Estimate local tissue thresholds (GM) 20s
Intensity transformation 0s
SANLM denoising after LAS (medium) 23s
80s
ROI segmentation (partitioning)
Atlas -> subject space 7s
Major structures 13s
Ventricle detection 11s
Blood vessel detection 7s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 45s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 3s
Final corrections 2s
89s
No enhanced blood vessel correction is required 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 25s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 3s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 1s
Level 3 cleanup (CSF/WM PVE) 2s
10s
9s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 2s
ROI estimation of 'cobra' atlas 8s
ROI estimation of 'neuromorphometrics' atlas 29s
ROI estimation of 'lpba40' atlas 8s
ROI estimation of 'hammers' atlas 20s
ROI estimation of 'thalamus' atlas 1s
ROI estimation of 'suit' atlas 4s
ROI estimation of 'ibsr' atlas 7s
ROI estimation of 'aal3' atlas 12s
ROI estimation of 'mori' atlas 16s
ROI estimation of 'anatomy3' atlas 22s
ROI estimation of 'julichbrain' atlas 33s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 15s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 31s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 70s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 100s
Write results 102s
386s
Quality check 11s
/var/lib/condor/execute/dir_1149267/ds/sub-848092/report/catreport_sub-848092_acq-headmotion2_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 21 minute(s) and 8 second(s).
Image Quality Rating (IQR): 87.17% (B+)
GM volume (GMV): 45.30% (530.68 / 1171.47 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/mri
Reports are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/report
Labels are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/label
------------------------------------------------------------------------
22-Oct-2025 01:26:20 - Done 'CAT12: Segmentation'
22-Oct-2025 01:26:20 - Done
Bye for now...
get(ok): sourcedata/raw/sub-848092/anat/sub-848092_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.mat (file)
unlock(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-848092/mri/m0wp1sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/mwp1sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/p0sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-848092/mri/wp0sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.mat (file)
unlock(ok): sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_1149267/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-848092/label/catROI_sub-848092_acq-headmotion2_T1w.mat (file)
add(ok): sub-848092/label/catROI_sub-848092_acq-headmotion2_T1w.xml (file)
add(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/m0wp1sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/mwp1sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/p0sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/wp0sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/report/cat_sub-848092_acq-headmotion2_T1w.mat (file)
add(ok): sub-848092/report/cat_sub-848092_acq-headmotion2_T1w.xml (file)
add(ok): sub-848092/report/catlog_sub-848092_acq-headmotion2_T1w.txt (file)
add(ok): sub-848092/report/catreport_sub-848092_acq-headmotion2_T1w.pdf (file)
add(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/m0wp1sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/mwp1sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/p0sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/wp0sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.mat (file)
add(ok): sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 25)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 11)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:27:13 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:27:14 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1149267/ds/sub-848092/sub-848092_acq-headmotion1_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-848092/sub-848092_acq-headmotion1_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 50s
Affine preprocessing (APP)
Initialize 8s
Estimate background 7s
Initial correction 7s
Refine background 4s
Final correction 5s
Final scaling 6s
43s
Correct center-of-mass 6s
Affine registration 9s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
71s
SPM preprocessing 1 (estimate 2): 75s
SPM preprocessing 2 (write)
Write Segmentation 20s
Update Segmentation 13s
Update Skull-Stripping 39s
Update probability maps 8s
79s
Global intensity correction 15s
SANLM denoising after intensity normalization (medium) 13s
Fast Optimized Shooting registration 9s
99s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 3s
Prepare partitions 2s
Prepare segments (LASmod = 1.00) 11s
Estimate local tissue thresholds (WM) 19s
Estimate local tissue thresholds (GM) 21s
Intensity transformation 0s
SANLM denoising after LAS (medium) 23s
80s
ROI segmentation (partitioning)
Atlas -> subject space 7s
Major structures 13s
Ventricle detection 13s
Blood vessel detection 7s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 45s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 3s
Final corrections 2s
92s
No enhanced blood vessel correction is required 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 25s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 3s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 1s
Level 3 cleanup (CSF/WM PVE) 2s
10s
6s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 2s
ROI estimation of 'cobra' atlas 8s
ROI estimation of 'neuromorphometrics' atlas 29s
ROI estimation of 'lpba40' atlas 9s
ROI estimation of 'hammers' atlas 21s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 4s
ROI estimation of 'ibsr' atlas 7s
ROI estimation of 'aal3' atlas 11s
ROI estimation of 'mori' atlas 16s
ROI estimation of 'anatomy3' atlas 22s
ROI estimation of 'julichbrain' atlas 30s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 12s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 24s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 56s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 82s
Write results 84s
341s
Quality check 11s
/var/lib/condor/execute/dir_1149267/ds/sub-848092/report/catreport_sub-848092_acq-headmotion1_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 20 minute(s) and 54 second(s).
Image Quality Rating (IQR): 78.30% (C+)
GM volume (GMV): 45.09% (537.40 / 1191.90 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/mri
Reports are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/report
Labels are saved in /var/lib/condor/execute/dir_1149267/ds/sub-848092/label
------------------------------------------------------------------------
22-Oct-2025 01:48:11 - Done 'CAT12: Segmentation'
22-Oct-2025 01:48:11 - Done
Bye for now...
get(ok): sourcedata/raw/sub-848092/anat/sub-848092_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-848092/label/catROI_sub-848092_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.mat (file)
unlock(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-848092/mri/m0wp1sub-848092_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/m0wp1sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/mwp1sub-848092_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/mwp1sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/p0sub-848092_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/p0sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
unlock(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
unlock(ok): sub-848092/mri/wp0sub-848092_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-848092/mri/wp0sub-848092_acq-standard_T1w.nii.gz (file)
unlock(ok): sub-848092/report/cat_sub-848092_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.mat (file)
unlock(ok): sub-848092/report/catreport_sub-848092_acq-headmotion2_T1w.pdf (file)
unlock(ok): sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_1149267/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-848092/label/catROI_sub-848092_acq-headmotion1_T1w.mat (file)
add(ok): sub-848092/label/catROI_sub-848092_acq-headmotion1_T1w.xml (file)
add(ok): sub-848092/mri/it_sub-848092_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/m0wp1sub-848092_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-848092/mri/mwp1sub-848092_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-848092/mri/p0sub-848092_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-848092/mri/t_sub-848092_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/wp0sub-848092_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-848092/report/cat_sub-848092_acq-headmotion1_T1w.mat (file)
add(ok): sub-848092/report/cat_sub-848092_acq-headmotion1_T1w.xml (file)
add(ok): sub-848092/report/catlog_sub-848092_acq-headmotion1_T1w.txt (file)
add(ok): sub-848092/report/catreport_sub-848092_acq-headmotion1_T1w.pdf (file)
add(ok): sub-848092/label/catROI_sub-848092_acq-headmotion2_T1w.mat (file)
add(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/m0wp1sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/m0wp1sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/mwp1sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/mwp1sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/p0sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/p0sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-848092/mri/wp0sub-848092_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-848092/mri/wp0sub-848092_acq-standard_T1w.nii.gz (file)
add(ok): sub-848092/report/cat_sub-848092_acq-headmotion2_T1w.mat (file)
add(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.mat (file)
add(ok): sub-848092/report/catreport_sub-848092_acq-headmotion2_T1w.pdf (file)
add(ok): sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 36)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 22)
copy(ok): sub-848092/label/catROI_sub-848092_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/label/catROI_sub-848092_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/label/catROI_sub-848092_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/it_sub-848092_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/it_sub-848092_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/it_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/it_sub-848092_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/m0wp1sub-848092_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/m0wp1sub-848092_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/m0wp1sub-848092_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/mwp1sub-848092_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/mwp1sub-848092_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/mwp1sub-848092_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/p0sub-848092_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/p0sub-848092_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/p0sub-848092_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/t_sub-848092_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/t_sub-848092_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/t_sub-848092_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/t_sub-848092_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/wp0sub-848092_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/wp0sub-848092_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/mri/wp0sub-848092_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-848092/report/cat_sub-848092_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/report/cat_sub-848092_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/report/cat_sub-848092_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-848092/report/catreport_sub-848092_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-848092/report/catreport_sub-848092_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-848092/report/catreport_sub-848092_acq-standard_T1w.pdf (file) [to catqc_out-storage...]
action summary:
copy (ok: 33)
flock: getting lock took 0.001091 seconds
flock: executing git
SUCCESS