install(ok): /var/lib/condor/execute/dir_1886988/ds (dataset)
install(ok): /var/lib/condor/execute/dir_1886988/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1886988/ds/sourcedata/raw]
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 00:40:42 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 00:40:42 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1886988/ds/sub-149050/sub-149050_acq-headmotion2_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-149050/sub-149050_acq-headmotion2_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 63s
Affine preprocessing (APP)
Initialize 8s
Estimate background 8s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 8s
48s
Correct center-of-mass 6s
Affine registration 13s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
84s
SPM preprocessing 1 (estimate 2): 85s
SPM preprocessing 2 (write)
Write Segmentation 22s
Update Segmentation 16s
Update Skull-Stripping 44s
Update probability maps 9s
90s
Global intensity correction 16s
SANLM denoising after intensity normalization (medium) 17s
Fast Optimized Shooting registration 6s
105s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.08) 14s
Estimate local tissue thresholds (WM) 20s
Estimate local tissue thresholds (GM) 24s
Intensity transformation 0s
SANLM denoising after LAS (medium) 30s
98s
ROI segmentation (partitioning)
Atlas -> subject space 8s
Major structures 18s
Ventricle detection 13s
Blood vessel detection 8s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 70s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 4s
Final corrections 3s
126s
Apply enhanced blood vessel correction 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.07) 32s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.690.08,0.980.06]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 4s
Level 1 cleanup (brain masking) 3s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
12s
7s
Write result maps 2s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 4s
ROI estimation of 'cobra' atlas 13s
ROI estimation of 'neuromorphometrics' atlas 48s
ROI estimation of 'lpba40' atlas 14s
ROI estimation of 'hammers' atlas 34s
ROI estimation of 'thalamus' atlas 3s
ROI estimation of 'suit' atlas 8s
ROI estimation of 'ibsr' atlas 13s
ROI estimation of 'aal3' atlas 21s
ROI estimation of 'mori' atlas 31s
ROI estimation of 'anatomy3' atlas 44s
ROI estimation of 'julichbrain' atlas 55s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 7s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 24s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 40s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 75s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 92s
Write results 94s
529s
Quality check 14s
/var/lib/condor/execute/dir_1886988/ds/sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 28 minute(s) and 1 second(s).
Image Quality Rating (IQR): 83.26% (B-)
GM volume (GMV): 47.02% (671.54 / 1428.05 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/mri
Reports are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/report
Labels are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/label
------------------------------------------------------------------------
22-Oct-2025 01:08:45 - Done 'CAT12: Segmentation'
22-Oct-2025 01:08:45 - Done
Bye for now...
get(ok): sourcedata/raw/sub-149050/anat/sub-149050_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...]
install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1886988/ds/code/cat12]
get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...]
run(ok): /var/lib/condor/execute/dir_1886988/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.mat (file)
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.xml (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/p0sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/wp0sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.mat (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.xml (file)
add(ok): sub-149050/report/catlog_sub-149050_acq-headmotion2_T1w.txt (file)
add(ok): sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 14)
get (notneeded: 2, ok: 2)
install (ok: 1)
run (ok: 1)
save (ok: 1)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:09:27 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:09:28 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1886988/ds/sub-149050/sub-149050_acq-headmotion1_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-149050/sub-149050_acq-headmotion1_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 63s
Affine preprocessing (APP)
Initialize 8s
Estimate background 8s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 7s
46s
Correct center-of-mass 5s
Affine registration 11s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
86s
SPM preprocessing 1 (estimate 2): 74s
SPM preprocessing 2 (write)
Write Segmentation 21s
Update Segmentation 16s
Update Skull-Stripping 45s
Update probability maps 9s
91s
Global intensity correction 16s
SANLM denoising after intensity normalization (medium) 18s
Fast Optimized Shooting registration 10s
108s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 2s
Prepare segments (LASmod = 1.00) 14s
Estimate local tissue thresholds (WM) 21s
Estimate local tissue thresholds (GM) 24s
Intensity transformation 0s
SANLM denoising after LAS (medium) 30s
98s
ROI segmentation (partitioning)
Atlas -> subject space 8s
Major structures 18s
Ventricle detection 17s
Blood vessel detection 9s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 77s
Manual stroke lesion detection 0s
Closing of deep structures 1s
Side alignment 4s
Final corrections 3s
138s
Apply enhanced blood vessel correction 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 33s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 4s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
13s
3s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 3s
ROI estimation of 'cobra' atlas 11s
ROI estimation of 'neuromorphometrics' atlas 37s
ROI estimation of 'lpba40' atlas 11s
ROI estimation of 'hammers' atlas 27s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 6s
ROI estimation of 'ibsr' atlas 10s
ROI estimation of 'aal3' atlas 16s
ROI estimation of 'mori' atlas 23s
ROI estimation of 'anatomy3' atlas 36s
ROI estimation of 'julichbrain' atlas 48s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 6s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 17s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 36s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 61s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 89s
Write results 90s
441s
Quality check 14s
/var/lib/condor/execute/dir_1886988/ds/sub-149050/report/catreport_sub-149050_acq-headmotion1_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 25 minute(s) and 45 second(s).
Image Quality Rating (IQR): 84.25% (B)
GM volume (GMV): 46.69% (674.90 / 1445.39 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/mri
Reports are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/report
Labels are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/label
------------------------------------------------------------------------
22-Oct-2025 01:35:16 - Done 'CAT12: Segmentation'
22-Oct-2025 01:35:16 - Done
Bye for now...
get(ok): sourcedata/raw/sub-149050/anat/sub-149050_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/p0sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-149050/mri/wp0sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_1886988/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion1_T1w.mat (file)
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion1_T1w.xml (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/p0sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/wp0sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion1_T1w.mat (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion1_T1w.xml (file)
add(ok): sub-149050/report/catlog_sub-149050_acq-headmotion1_T1w.txt (file)
add(ok): sub-149050/report/catreport_sub-149050_acq-headmotion1_T1w.pdf (file)
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/p0sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/wp0sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.mat (file)
add(ok): sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 25)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 11)
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64
SPM25, version 25.01.02 (standalone)
MATLAB, version 23.2.0.2859533 (R2023b) Update 10
___ ____ __ __
/ __)( _ \( \/ )
\__ \ )___/ ) ( Statistical Parametric Mapping
(___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/
Item opts: No field(s) named
ngaus
warpreg
bias
acc
redspmres
Item registration: No field(s) named
T1
brainmask
cat12atlas
darteltpm
shootingtpm
regstr
Item atlas: No field(s) named
warped
dartel
------------------------------------------------------------------------
22-Oct-2025 01:35:59 - Running job #1
------------------------------------------------------------------------
22-Oct-2025 01:35:59 - Running 'CAT12: Segmentation'
--------------------------------------------
No commercial use of LPBA40 atlas!
Permission is granted to use this atlas without charge for non-commercial research purposes only:
https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf
--------------------------------------------
--------------------------------------------
No commercial use of SUIT cerebellar atlas!
Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use.
--------------------------------------------
Uncompress /var/lib/condor/execute/dir_1886988/ds/sub-149050/sub-149050_acq-standard_T1w.nii
------------------------------------------------------------------------
CAT12.9 r2665: 1/1: ./ds/sub-149050/sub-149050_acq-standard_T1w.n
------------------------------------------------------------------------
SANLM denoising (medium) 65s
Affine preprocessing (APP)
Initialize 8s
Estimate background 7s
Initial correction 7s
Refine background 4s
Final correction 6s
Final scaling 6s
44s
Correct center-of-mass 6s
Affine registration 9s
SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file
Fontconfig error: Cannot load default config file
81s
SPM preprocessing 1 (estimate 2): 61s
SPM preprocessing 2 (write)
Write Segmentation 21s
Update Segmentation 16s
Update Skull-Stripping 44s
Update probability maps 9s
89s
Global intensity correction 16s
SANLM denoising after intensity normalization (medium) 20s
Fast Optimized Shooting registration 6s
103s
Local adaptive segmentation (LASstr=0.50)
Prepare maps 4s
Prepare partitions 4s
Prepare segments (LASmod = 1.00) 15s
Estimate local tissue thresholds (WM) 22s
Estimate local tissue thresholds (GM) 26s
Intensity transformation 0s
SANLM denoising after LAS (medium) 30s
103s
ROI segmentation (partitioning)
Atlas -> subject space 9s
Major structures 19s
Ventricle detection 20s
Blood vessel detection 10s
WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 71s
Manual stroke lesion detection 0s
Closing of deep structures 2s
Side alignment 4s
Final corrections 3s
137s
Apply enhanced blood vessel correction 1s
Amap using initial SPM12 segmentations (MRF filter strength 0.06) 32s
AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05]
Final cleanup (gcutstr=0.25)
Level 1 cleanup (ROI estimation) 5s
Level 1 cleanup (brain masking) 4s
Level 2 cleanup (CSF correction) 2s
Level 3 cleanup (CSF/WM PVE) 3s
13s
7s
Write result maps 1s
ROI estimation in native space
ROI estimation of 'thalamic_nuclei' atlas 2s
ROI estimation of 'cobra' atlas 8s
ROI estimation of 'neuromorphometrics' atlas 29s
ROI estimation of 'lpba40' atlas 8s
ROI estimation of 'hammers' atlas 22s
ROI estimation of 'thalamus' atlas 2s
ROI estimation of 'suit' atlas 5s
ROI estimation of 'ibsr' atlas 9s
ROI estimation of 'aal3' atlas 14s
ROI estimation of 'mori' atlas 19s
ROI estimation of 'anatomy3' atlas 25s
ROI estimation of 'julichbrain' atlas 35s
ROI estimation of 'Tian_Subcortex_S4_7T' atlas 5s
ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 13s
ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 26s
ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 57s
ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 83s
Write results 85s
363s
Quality check 14s
/var/lib/condor/execute/dir_1886988/ds/sub-149050/report/catreport_sub-149050_acq-standard_T1w.pdf
------------------------------------------------------------------------
CAT preprocessing takes 23 minute(s) and 29 second(s).
Image Quality Rating (IQR): 87.96% (B+)
GM volume (GMV): 50.27% (741.93 / 1475.75 ml)
Segmentations are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/mri
Reports are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/report
Labels are saved in /var/lib/condor/execute/dir_1886988/ds/sub-149050/label
------------------------------------------------------------------------
22-Oct-2025 01:59:31 - Done 'CAT12: Segmentation'
22-Oct-2025 01:59:31 - Done
Bye for now...
get(ok): sourcedata/raw/sub-149050/anat/sub-149050_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...]
unlock(ok): sub-149050/label/catROI_sub-149050_acq-headmotion1_T1w.mat (file)
unlock(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file)
unlock(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file)
unlock(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/p0sub-149050_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/p0sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file)
unlock(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file)
unlock(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
unlock(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
unlock(ok): sub-149050/mri/wp0sub-149050_acq-headmotion1_T1w.nii.gz (file)
unlock(ok): sub-149050/mri/wp0sub-149050_acq-headmotion2_T1w.nii.gz (file)
unlock(ok): sub-149050/report/cat_sub-149050_acq-headmotion1_T1w.mat (file)
unlock(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.mat (file)
unlock(ok): sub-149050/report/catreport_sub-149050_acq-headmotion1_T1w.pdf (file)
unlock(ok): sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf (file)
run(ok): /var/lib/condor/execute/dir_1886988/ds (dataset) [singularity exec -B /var/lib/condor/exec...]
add(ok): sub-149050/label/catROI_sub-149050_acq-standard_T1w.mat (file)
add(ok): sub-149050/label/catROI_sub-149050_acq-standard_T1w.xml (file)
add(ok): sub-149050/mri/it_sub-149050_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/m0wp1sub-149050_acq-standard_T1w.nii.gz (file)
add(ok): sub-149050/mri/mwp1sub-149050_acq-standard_T1w.nii.gz (file)
add(ok): sub-149050/mri/p0sub-149050_acq-standard_T1w.nii.gz (file)
add(ok): sub-149050/mri/t_sub-149050_acq-standard_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-standard_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/wp0sub-149050_acq-standard_T1w.nii.gz (file)
add(ok): sub-149050/report/cat_sub-149050_acq-standard_T1w.mat (file)
add(ok): sub-149050/report/cat_sub-149050_acq-standard_T1w.xml (file)
add(ok): sub-149050/report/catlog_sub-149050_acq-standard_T1w.txt (file)
add(ok): sub-149050/report/catreport_sub-149050_acq-standard_T1w.pdf (file)
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion1_T1w.mat (file)
add(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/p0sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/p0sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file)
add(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file)
add(ok): sub-149050/mri/wp0sub-149050_acq-headmotion1_T1w.nii.gz (file)
add(ok): sub-149050/mri/wp0sub-149050_acq-headmotion2_T1w.nii.gz (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion1_T1w.mat (file)
add(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.mat (file)
add(ok): sub-149050/report/catreport_sub-149050_acq-headmotion1_T1w.pdf (file)
add(ok): sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf (file)
save(ok): . (dataset)
action summary:
add (ok: 36)
get (notneeded: 4, ok: 1)
run (ok: 1)
save (ok: 1)
unlock (ok: 22)
copy(ok): sub-149050/label/catROI_sub-149050_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/label/catROI_sub-149050_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/label/catROI_sub-149050_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/it_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/it_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/it_sub-149050_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/it_sub-149050_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/m0wp1sub-149050_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/m0wp1sub-149050_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/mwp1sub-149050_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/mwp1sub-149050_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/p0sub-149050_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/p0sub-149050_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/p0sub-149050_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/t_sub-149050_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/t_sub-149050_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/t_sub-149050_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/t_sub-149050_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/wp0sub-149050_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/wp0sub-149050_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/mri/wp0sub-149050_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...]
copy(ok): sub-149050/report/cat_sub-149050_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/report/cat_sub-149050_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/report/cat_sub-149050_acq-standard_T1w.mat (file) [to catqc_out-storage...]
copy(ok): sub-149050/report/catreport_sub-149050_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-149050/report/catreport_sub-149050_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...]
copy(ok): sub-149050/report/catreport_sub-149050_acq-standard_T1w.pdf (file) [to catqc_out-storage...]
action summary:
copy (ok: 33)
flock: getting lock took 0.000882 seconds
flock: executing git
SUCCESS