install(ok): /var/lib/condor/execute/dir_208971/ds (dataset) install(ok): /var/lib/condor/execute/dir_208971/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_208971/ds/sourcedata/raw] ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 00:38:53 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 00:38:53 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_208971/ds/sub-654178/sub-654178_acq-headmotion2_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-654178/sub-654178_acq-headmotion2_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 43s Affine preprocessing (APP) Initialize 6s Estimate background 6s Initial correction 5s Refine background 3s Final correction 4s Final scaling 5s 33s Correct center-of-mass 4s Affine registration 7s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 57s SPM preprocessing 1 (estimate 2): 38s SPM preprocessing 2 (write) Write Segmentation 15s Update Segmentation 12s Update Skull-Stripping 33s Update probability maps 7s 67s Global intensity correction 12s SANLM denoising after intensity normalization (medium) 14s Fast Optimized Shooting registration 8s 82s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 1s Prepare segments (LASmod = 1.09) 11s Estimate local tissue thresholds (WM) 16s Estimate local tissue thresholds (GM) 19s Intensity transformation 0s SANLM denoising after LAS (medium) 21s 74s ROI segmentation (partitioning) Atlas -> subject space 6s Major structures 14s Ventricle detection 13s Blood vessel detection 7s WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 58s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 2s 104s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 26s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 3s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 10s 8s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 2s ROI estimation of 'cobra' atlas 6s ROI estimation of 'neuromorphometrics' atlas 21s ROI estimation of 'lpba40' atlas 6s ROI estimation of 'hammers' atlas 14s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'suit' atlas 3s ROI estimation of 'ibsr' atlas 5s ROI estimation of 'aal3' atlas 9s ROI estimation of 'mori' atlas 11s ROI estimation of 'anatomy3' atlas 16s ROI estimation of 'julichbrain' atlas 21s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 3s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 9s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 17s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 39s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 52s Write results 54s 237s Quality check 11s /var/lib/condor/execute/dir_208971/ds/sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 16 minute(s) and 41 second(s). Image Quality Rating (IQR): 84.99% (B) GM volume (GMV): 47.82% (682.35 / 1426.87 ml) Segmentations are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/mri Reports are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/report Labels are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/label ------------------------------------------------------------------------ 22-Oct-2025 00:55:36 - Done 'CAT12: Segmentation' 22-Oct-2025 00:55:36 - Done Bye for now... get(ok): sourcedata/raw/sub-654178/anat/sub-654178_acq-headmotion2_T1w.nii.gz (file) [from s3-PUBLIC...] install(ok): code/cat12 (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_208971/ds/code/cat12] get(ok): code/cat12/cat12.9_r2665.simg (file) [from inm7-storage...] run(ok): /var/lib/condor/execute/dir_208971/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.mat (file) add(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.xml (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/p0sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/wp0sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.mat (file) add(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.xml (file) add(ok): sub-654178/report/catlog_sub-654178_acq-headmotion2_T1w.txt (file) add(ok): sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 14) get (notneeded: 2, ok: 2) install (ok: 1) run (ok: 1) save (ok: 1) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 00:56:08 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 00:56:08 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_208971/ds/sub-654178/sub-654178_acq-standard_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-654178/sub-654178_acq-standard_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 44s Affine preprocessing (APP) Initialize 6s Estimate background 5s Initial correction 5s Refine background 3s Final correction 4s Final scaling 4s 33s Correct center-of-mass 4s Affine registration 6s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 56s SPM preprocessing 1 (estimate 2): 40s SPM preprocessing 2 (write) Write Segmentation 16s Update Segmentation 12s Update Skull-Stripping 33s Update probability maps 7s 67s Global intensity correction 12s SANLM denoising after intensity normalization (medium) 16s Fast Optimized Shooting registration 5s 79s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 3s Prepare segments (LASmod = 1.11) 11s Estimate local tissue thresholds (WM) 16s Estimate local tissue thresholds (GM) 19s Intensity transformation 0s SANLM denoising after LAS (medium) 21s 76s ROI segmentation (partitioning) Atlas -> subject space 6s Major structures 14s Ventricle detection 11s Blood vessel detection 7s WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 54s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 2s 99s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.07) 26s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 3s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 10s 8s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 2s ROI estimation of 'cobra' atlas 6s ROI estimation of 'neuromorphometrics' atlas 22s ROI estimation of 'lpba40' atlas 6s ROI estimation of 'hammers' atlas 15s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'suit' atlas 3s ROI estimation of 'ibsr' atlas 5s ROI estimation of 'aal3' atlas 9s ROI estimation of 'mori' atlas 11s ROI estimation of 'anatomy3' atlas 16s ROI estimation of 'julichbrain' atlas 21s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 3s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 9s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 17s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 39s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 52s Write results 53s 238s Quality check 10s /var/lib/condor/execute/dir_208971/ds/sub-654178/report/catreport_sub-654178_acq-standard_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 16 minute(s) and 43 second(s). Image Quality Rating (IQR): 87.06% (B+) GM volume (GMV): 48.88% (694.73 / 1421.35 ml) Segmentations are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/mri Reports are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/report Labels are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/label ------------------------------------------------------------------------ 22-Oct-2025 01:12:53 - Done 'CAT12: Segmentation' 22-Oct-2025 01:12:53 - Done Bye for now... get(ok): sourcedata/raw/sub-654178/anat/sub-654178_acq-standard_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.mat (file) unlock(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/p0sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-654178/mri/wp0sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.mat (file) unlock(ok): sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_208971/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-654178/label/catROI_sub-654178_acq-standard_T1w.mat (file) add(ok): sub-654178/label/catROI_sub-654178_acq-standard_T1w.xml (file) add(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/m0wp1sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/mri/mwp1sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/mri/p0sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/wp0sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/report/cat_sub-654178_acq-standard_T1w.mat (file) add(ok): sub-654178/report/cat_sub-654178_acq-standard_T1w.xml (file) add(ok): sub-654178/report/catlog_sub-654178_acq-standard_T1w.txt (file) add(ok): sub-654178/report/catreport_sub-654178_acq-standard_T1w.pdf (file) add(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/p0sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/wp0sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.mat (file) add(ok): sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 25) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 11) ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/usr/local/MATLAB/MATLAB_Runtime/R2023b/runtime/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/bin/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/os/glnxa64:/usr/local/MATLAB/MATLAB_Runtime/R2023b/sys/opengl/lib/glnxa64 SPM25, version 25.01.02 (standalone) MATLAB, version 23.2.0.2859533 (R2023b) Update 10 ___ ____ __ __ / __)( _ \( \/ ) \__ \ )___/ ) ( Statistical Parametric Mapping (___/(__) (_/\/\_) SPM25 - https://www.fil.ion.ucl.ac.uk/spm/ Item opts: No field(s) named ngaus warpreg bias acc redspmres Item registration: No field(s) named T1 brainmask cat12atlas darteltpm shootingtpm regstr Item atlas: No field(s) named warped dartel ------------------------------------------------------------------------ 22-Oct-2025 01:13:26 - Running job #1 ------------------------------------------------------------------------ 22-Oct-2025 01:13:26 - Running 'CAT12: Segmentation' -------------------------------------------- No commercial use of LPBA40 atlas! Permission is granted to use this atlas without charge for non-commercial research purposes only: https://www.loni.usc.edu/docs/atlases_methods/Human_Atlas_Methods.pdf -------------------------------------------- -------------------------------------------- No commercial use of SUIT cerebellar atlas! Creative Commons Attribution-NonCommercial 3.0 Unported License does not allow commercial use. -------------------------------------------- Uncompress /var/lib/condor/execute/dir_208971/ds/sub-654178/sub-654178_acq-headmotion1_T1w.nii ------------------------------------------------------------------------ CAT12.9 r2665: 1/1: ./ds/sub-654178/sub-654178_acq-headmotion1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium) 43s Affine preprocessing (APP) Initialize 6s Estimate background 6s Initial correction 5s Refine background 3s Final correction 4s Final scaling 4s 32s Correct center-of-mass 3s Affine registration 6s SPM preprocessing 1 (estimate 1 - TPM registration): Fontconfig error: Cannot load default config file Fontconfig error: Cannot load default config file 56s SPM preprocessing 1 (estimate 2): 39s SPM preprocessing 2 (write) Write Segmentation 16s Update Segmentation 12s Update Skull-Stripping 34s Update probability maps 7s 68s Global intensity correction 12s SANLM denoising after intensity normalization (medium) 14s Fast Optimized Shooting registration 5s 79s Local adaptive segmentation (LASstr=0.50) Prepare maps 3s Prepare partitions 3s Prepare segments (LASmod = 1.03) 11s Estimate local tissue thresholds (WM) 16s Estimate local tissue thresholds (GM) 19s Intensity transformation 0s SANLM denoising after LAS (medium) 21s 75s ROI segmentation (partitioning) Atlas -> subject space 6s Major structures 14s Ventricle detection 11s Blood vessel detection 7s WMH detection (WMHCstr=0.50 > WMHCstr'=0.03) 48s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 2s 92s Apply enhanced blood vessel correction 1s Amap using initial SPM12 segmentations (MRF filter strength 0.06) 23s AMAP peaks: [CSF,GM,WM] = [0.360.06,0.680.08,0.980.05] Final cleanup (gcutstr=0.25) Level 1 cleanup (ROI estimation) 3s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 10s 8s Write result maps 1s ROI estimation in native space ROI estimation of 'thalamic_nuclei' atlas 2s ROI estimation of 'cobra' atlas 6s ROI estimation of 'neuromorphometrics' atlas 21s ROI estimation of 'lpba40' atlas 6s ROI estimation of 'hammers' atlas 14s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'suit' atlas 3s ROI estimation of 'ibsr' atlas 5s ROI estimation of 'aal3' atlas 9s ROI estimation of 'mori' atlas 11s ROI estimation of 'anatomy3' atlas 16s ROI estimation of 'julichbrain' atlas 21s ROI estimation of 'Tian_Subcortex_S4_7T' atlas 3s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 9s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 17s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 39s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 52s Write results 53s 238s Quality check 10s /var/lib/condor/execute/dir_208971/ds/sub-654178/report/catreport_sub-654178_acq-headmotion1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 16 minute(s) and 32 second(s). Image Quality Rating (IQR): 84.85% (B) GM volume (GMV): 47.80% (678.41 / 1419.35 ml) Segmentations are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/mri Reports are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/report Labels are saved in /var/lib/condor/execute/dir_208971/ds/sub-654178/label ------------------------------------------------------------------------ 22-Oct-2025 01:30:00 - Done 'CAT12: Segmentation' 22-Oct-2025 01:30:00 - Done Bye for now... get(ok): sourcedata/raw/sub-654178/anat/sub-654178_acq-headmotion1_T1w.nii.gz (file) [from s3-PUBLIC...] unlock(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.mat (file) unlock(ok): sub-654178/label/catROI_sub-654178_acq-standard_T1w.mat (file) unlock(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/m0wp1sub-654178_acq-standard_T1w.nii.gz (file) unlock(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/mwp1sub-654178_acq-standard_T1w.nii.gz (file) unlock(ok): sub-654178/mri/p0sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/p0sub-654178_acq-standard_T1w.nii.gz (file) unlock(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) unlock(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) unlock(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_affine_reorient.mat (file) unlock(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) unlock(ok): sub-654178/mri/wp0sub-654178_acq-headmotion2_T1w.nii.gz (file) unlock(ok): sub-654178/mri/wp0sub-654178_acq-standard_T1w.nii.gz (file) unlock(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.mat (file) unlock(ok): sub-654178/report/cat_sub-654178_acq-standard_T1w.mat (file) unlock(ok): sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf (file) unlock(ok): sub-654178/report/catreport_sub-654178_acq-standard_T1w.pdf (file) run(ok): /var/lib/condor/execute/dir_208971/ds (dataset) [singularity exec -B /var/lib/condor/exec...] add(ok): sub-654178/label/catROI_sub-654178_acq-headmotion1_T1w.mat (file) add(ok): sub-654178/label/catROI_sub-654178_acq-headmotion1_T1w.xml (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-654178/mri/p0sub-654178_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion1_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion1_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/wp0sub-654178_acq-headmotion1_T1w.nii.gz (file) add(ok): sub-654178/report/cat_sub-654178_acq-headmotion1_T1w.mat (file) add(ok): sub-654178/report/cat_sub-654178_acq-headmotion1_T1w.xml (file) add(ok): sub-654178/report/catlog_sub-654178_acq-headmotion1_T1w.txt (file) add(ok): sub-654178/report/catreport_sub-654178_acq-headmotion1_T1w.pdf (file) add(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.mat (file) add(ok): sub-654178/label/catROI_sub-654178_acq-standard_T1w.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/m0wp1sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/mwp1sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/mri/p0sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/p0sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_affine_reorient.mat (file) add(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) add(ok): sub-654178/mri/wp0sub-654178_acq-headmotion2_T1w.nii.gz (file) add(ok): sub-654178/mri/wp0sub-654178_acq-standard_T1w.nii.gz (file) add(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.mat (file) add(ok): sub-654178/report/cat_sub-654178_acq-standard_T1w.mat (file) add(ok): sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf (file) add(ok): sub-654178/report/catreport_sub-654178_acq-standard_T1w.pdf (file) save(ok): . (dataset) action summary: add (ok: 36) get (notneeded: 4, ok: 1) run (ok: 1) save (ok: 1) unlock (ok: 22) copy(ok): sub-654178/label/catROI_sub-654178_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/label/catROI_sub-654178_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/label/catROI_sub-654178_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/it_sub-654178_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/it_sub-654178_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/it_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/it_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/m0wp1sub-654178_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/m0wp1sub-654178_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/mwp1sub-654178_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/mwp1sub-654178_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/p0sub-654178_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/p0sub-654178_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/p0sub-654178_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/t_sub-654178_acq-headmotion1_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/t_sub-654178_acq-headmotion1_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/t_sub-654178_acq-headmotion2_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_affine_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/t_sub-654178_acq-standard_T1w_rigid_reorient.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/wp0sub-654178_acq-headmotion1_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/wp0sub-654178_acq-headmotion2_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/mri/wp0sub-654178_acq-standard_T1w.nii.gz (file) [to catqc_out-storage...] copy(ok): sub-654178/report/cat_sub-654178_acq-headmotion1_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/report/cat_sub-654178_acq-headmotion2_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/report/cat_sub-654178_acq-standard_T1w.mat (file) [to catqc_out-storage...] copy(ok): sub-654178/report/catreport_sub-654178_acq-headmotion1_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-654178/report/catreport_sub-654178_acq-headmotion2_T1w.pdf (file) [to catqc_out-storage...] copy(ok): sub-654178/report/catreport_sub-654178_acq-standard_T1w.pdf (file) [to catqc_out-storage...] action summary: copy (ok: 33) flock: getting lock took 0.000762 seconds flock: executing git SUCCESS