Felix Hoffstaedter
b7e8344e9f
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIs1 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIs1",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
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"bids_meta": {
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"FileSize": 0.004658984020352364,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1,
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"acquisition": "r10x10x10",
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"dataset": "<unset>",
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"datatype": "anat",
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"extension": ".nii.gz",
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"modality": "T1w",
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"session": "s1Ax2",
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"subject": "cIs1",
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"suffix": "T1w"
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},
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"cjv": 0.464436127744511,
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"cnr": 1.8130400189738438,
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"efc": 0.6579,
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"fber": -1.0,
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"fwhm_avg": 2.8793933333333332,
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"fwhm_x": 2.88147,
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"fwhm_y": 3.0253,
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"fwhm_z": 2.73141,
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"icvs_csf": 0.2945126505276991,
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"icvs_gm": 0.3641333729075485,
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"icvs_wm": 0.34135397656475236,
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"inu_med": 1.0036861896514893,
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"inu_range": 0.1301509976387023,
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"provenance": {
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"md5sum": "587b447cf1f741d9f1427f5ae7d9ed1e",
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"settings": {
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826",
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"warnings": {
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"large_rot_frame": true,
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"small_air_mask": false
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}
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},
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"qi_1": 0.0,
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"qi_2": 0.0010390462498843958,
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"rpve_csf": 6.303282488297923,
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"rpve_gm": 6.224742922635784,
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"rpve_wm": 6.414677265216379,
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"size_x": 256,
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"size_y": 256,
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"size_z": 150,
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"snr_csf": 1.593591610122329,
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"snr_gm": 2.0638912827370377,
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"snr_total": 3.077125926524987,
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"snr_wm": 5.573894886715595,
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"snrd_csf": 11.059340173579079,
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"snrd_gm": 18.418529359715343,
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"snrd_total": 22.831302018813812,
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"snrd_wm": 39.016036523147015,
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"spacing_x": 1.0,
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"spacing_y": 1.0,
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"spacing_z": 1.0,
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"summary_bg_k": 3046.887,
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"summary_bg_mad": 0.0,
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"summary_bg_mean": 0.4585,
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"summary_bg_median": 0.0,
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"summary_bg_n": 4316344.0,
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"summary_bg_p05": 0.0,
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"summary_bg_p95": 0.0,
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"summary_bg_stdv": 15.9351,
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"summary_csf_k": 6.4449,
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"summary_csf_mad": 150.9345,
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"summary_csf_mean": 273.9656,
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"summary_csf_median": 269.0,
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"summary_csf_n": 445395.60459255375,
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"summary_csf_p05": 21.0,
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"summary_csf_p95": 545.0,
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"summary_csf_stdv": 168.8009,
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"summary_gm_k": 2.2731,
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"summary_gm_mad": 116.7343,
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"summary_gm_mean": 454.2286,
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"summary_gm_median": 448.0,
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"summary_gm_n": 550683.9977430102,
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"summary_gm_p05": 92.0,
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"summary_gm_p95": 838.0,
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"summary_gm_stdv": 217.0655,
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"summary_wm_k": 4.0999,
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"summary_wm_mad": 115.9482,
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"summary_wm_mean": 910.3015,
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"summary_wm_median": 949.0,
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"summary_wm_n": 516234.3977405176,
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"summary_wm_p05": 581.0,
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"summary_wm_p95": 1116.0,
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"summary_wm_stdv": 170.2578,
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"tpm_overlap_csf": 0.21397975035672068,
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"tpm_overlap_gm": 0.5258935964167863,
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"tpm_overlap_wm": 0.5144257874859134,
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"wm2max": 0.3477562696057995
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}
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