ds003416-mriqc/sub-cIIs04/ses-s1Bx2/dwi/sub-cIIs04_ses-s1Bx2_acq-b2000n96r25x25x25peAPP_run-106_dwi.json
Felix Hoffstaedter 373b7ea071 [DATALAD RUNCMD] Compute MRIQC for sub-cIIs04
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs04 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-cIIs04",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 09:25:43 +02:00

80 lines
1.9 KiB (Stored with Git Annex)
JSON

{
"NumberOfShells": 1,
"bValues": [
0.0,
2000.0
],
"bValuesEstimation": [
2000.0
],
"bdiffs_max": 0.5274,
"bdiffs_mean": 0.3072,
"bdiffs_median": 0.3049,
"bdiffs_min": 0.0154,
"bids_meta": {
"FileSize": 0.01983635127544403,
"FileSizeUnits": "GB",
"NumberOfVolumes": 97,
"acquisition": "b2000n96r25x25x25peAPP",
"dataset": "<unset>",
"datatype": "dwi",
"extension": ".nii.gz",
"modality": "dwi",
"run": 106,
"session": "s1Bx2",
"subject": "cIIs04",
"suffix": "dwi"
},
"efc_shell01": 0.0681,
"efc_shell02": 0.1785,
"fa_degenerate": 0.0,
"fa_nans": 0.0,
"fber_shell01": 3063.8276,
"fber_shell02": 4656.7183,
"fd_mean": 50.1687,
"fd_num": 96,
"fd_perc": 98.96907216494846,
"ndc": 0.8228,
"provenance": {
"md5sum": "894a017733ba513b5c44c41e334e0fad",
"settings": {
"testing": false
},
"software": "mriqc",
"version": "24.1.0.dev0+gd5b13cb5.d20240826"
},
"sigma_cc": 0.0,
"sigma_pca": 1710.9338,
"sigma_piesno": 559.905,
"snr_cc_shell0": null,
"snr_cc_shell1_best": null,
"snr_cc_shell1_worst": null,
"spikes_global": 27.22,
"spikes_slice_i": 134.24,
"spikes_slice_j": 22.37,
"spikes_slice_k": 111.86,
"summary_bg_k": 8.3105,
"summary_bg_mad": 0.0,
"summary_bg_mean": 2279.1603,
"summary_bg_median": 0.0,
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"summary_bg_p95": 12693.0,
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"summary_wm_k": 23.9944,
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}