Felix Hoffstaedter
373b7ea071
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs04 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIs04",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
|
|
"bids_meta": {
|
|
"FileSize": 0.005864426493644714,
|
|
"FileSizeUnits": "GB",
|
|
"NumberOfVolumes": 1,
|
|
"acquisition": "r10x10x10",
|
|
"dataset": "<unset>",
|
|
"datatype": "anat",
|
|
"extension": ".nii.gz",
|
|
"modality": "T1w",
|
|
"session": "s1Ax2",
|
|
"subject": "cIIs04",
|
|
"suffix": "T1w"
|
|
},
|
|
"cjv": 0.42657624434389135,
|
|
"cnr": 2.05482343912637,
|
|
"efc": 0.7435,
|
|
"fber": -1.0,
|
|
"fwhm_avg": 3.8956966666666673,
|
|
"fwhm_x": 3.73731,
|
|
"fwhm_y": 3.82917,
|
|
"fwhm_z": 4.12061,
|
|
"icvs_csf": 0.28673424130479624,
|
|
"icvs_gm": 0.3791784940781842,
|
|
"icvs_wm": 0.33408726461701954,
|
|
"inu_med": 0.7010551989078522,
|
|
"inu_range": 0.17732054293155664,
|
|
"provenance": {
|
|
"md5sum": "fe4dc1e9c504298e0e6562c56b0a85b0",
|
|
"settings": {
|
|
"testing": false
|
|
},
|
|
"software": "mriqc",
|
|
"version": "24.1.0.dev0+gd5b13cb5.d20240826",
|
|
"warnings": {
|
|
"large_rot_frame": true,
|
|
"small_air_mask": false
|
|
}
|
|
},
|
|
"qi_1": 0.0,
|
|
"qi_2": 0.0006588401470224249,
|
|
"rpve_csf": 5.643971409285373,
|
|
"rpve_gm": 5.6031738717236985,
|
|
"rpve_wm": 5.7622696820756385,
|
|
"size_x": 256,
|
|
"size_y": 256,
|
|
"size_z": 150,
|
|
"snr_csf": 1.6154018136266548,
|
|
"snr_gm": 2.87277835317854,
|
|
"snr_total": 5.433818264592237,
|
|
"snr_wm": 11.813274626971516,
|
|
"snrd_csf": 3.1141663216406408,
|
|
"snrd_gm": 5.467542825290897,
|
|
"snrd_total": 6.177613322081922,
|
|
"snrd_wm": 9.95113081931423,
|
|
"spacing_x": 1.0,
|
|
"spacing_y": 1.0,
|
|
"spacing_z": 1.0,
|
|
"summary_bg_k": 301.6218,
|
|
"summary_bg_mad": 0.0,
|
|
"summary_bg_mean": 5.1588,
|
|
"summary_bg_median": 0.0,
|
|
"summary_bg_n": 3764910.0,
|
|
"summary_bg_p05": 0.0,
|
|
"summary_bg_p95": 0.0,
|
|
"summary_bg_stdv": 64.5845,
|
|
"summary_csf_k": 1.2523,
|
|
"summary_csf_mad": 162.3059,
|
|
"summary_csf_mean": 305.6172,
|
|
"summary_csf_median": 307.0,
|
|
"summary_csf_n": 485500.71241798846,
|
|
"summary_csf_p05": 21.0,
|
|
"summary_csf_p95": 615.0,
|
|
"summary_csf_stdv": 190.0454,
|
|
"summary_gm_k": 4.9957,
|
|
"summary_gm_mad": 124.2876,
|
|
"summary_gm_mean": 544.6577,
|
|
"summary_gm_median": 539.0,
|
|
"summary_gm_n": 642028.0611440847,
|
|
"summary_gm_p05": 217.0,
|
|
"summary_gm_p95": 844.0,
|
|
"summary_gm_stdv": 187.6231,
|
|
"summary_wm_k": 7.6005,
|
|
"summary_wm_mad": 64.2591,
|
|
"summary_wm_mean": 966.8538,
|
|
"summary_wm_median": 981.0,
|
|
"summary_wm_n": 565679.23050712,
|
|
"summary_wm_p05": 804.0,
|
|
"summary_wm_p95": 1075.0,
|
|
"summary_wm_stdv": 83.0421,
|
|
"tpm_overlap_csf": 0.22216876210708306,
|
|
"tpm_overlap_gm": 0.5307777964018252,
|
|
"tpm_overlap_wm": 0.5354104400334876,
|
|
"wm2max": 0.4481415552233402
|
|
}
|