ds003416-mriqc/sub-cIIs03/ses-s1Bx1/dwi/sub-cIIs03_ses-s1Bx1_acq-b2500n96r25x25x25peAPP_run-105_dwi.json
Felix Hoffstaedter 4f19feb84a [DATALAD RUNCMD] Compute MRIQC for sub-cIIs03
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs03 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-cIIs03",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 05:00:44 +02:00

80 lines
1.9 KiB (Stored with Git Annex)
JSON

{
"NumberOfShells": 1,
"bValues": [
0.0,
2500.0
],
"bValuesEstimation": [
2500.0
],
"bdiffs_max": 0.067,
"bdiffs_mean": 0.018,
"bdiffs_median": 0.0162,
"bdiffs_min": 0.0014,
"bids_meta": {
"FileSize": 0.017367002554237843,
"FileSizeUnits": "GB",
"NumberOfVolumes": 97,
"acquisition": "b2500n96r25x25x25peAPP",
"dataset": "<unset>",
"datatype": "dwi",
"extension": ".nii.gz",
"modality": "dwi",
"run": 105,
"session": "s1Bx1",
"subject": "cIIs03",
"suffix": "dwi"
},
"efc_shell01": 0.3906,
"efc_shell02": 0.4572,
"fa_degenerate": 0.0,
"fa_nans": 0.0,
"fber_shell01": 696862.4375,
"fber_shell02": 479305.25,
"fd_mean": 3.9777,
"fd_num": 96,
"fd_perc": 98.96907216494846,
"ndc": 0.6357,
"provenance": {
"md5sum": "fc45074b964b8552822b792e4d4b1a8d",
"settings": {
"testing": false
},
"software": "mriqc",
"version": "24.1.0.dev0+gd5b13cb5.d20240826"
},
"sigma_cc": 1206.8382,
"sigma_pca": 451.609,
"sigma_piesno": 134.3629,
"snr_cc_shell0": 9.76,
"snr_cc_shell1_best": 6.35,
"snr_cc_shell1_worst": 6.35,
"spikes_global": 26.92,
"spikes_slice_i": 82.78,
"spikes_slice_j": 71.59,
"spikes_slice_k": 120.81,
"summary_bg_k": 125.2154,
"summary_bg_mad": 0.0,
"summary_bg_mean": 514.2834,
"summary_bg_median": 0.0,
"summary_bg_n": 348968.0,
"summary_bg_p05": 0.0,
"summary_bg_p95": 2524.0,
"summary_bg_stdv": 1363.1718,
"summary_fg_k": 0.3001,
"summary_fg_mad": 4345.5071,
"summary_fg_mean": 13466.1025,
"summary_fg_median": 12622.0,
"summary_fg_n": 93400.0,
"summary_fg_p05": 0.0,
"summary_fg_p95": 27200.0,
"summary_fg_stdv": 7111.0345,
"summary_wm_k": 14.4519,
"summary_wm_mad": 1326.929,
"summary_wm_mean": 12093.3407,
"summary_wm_median": 11890.0,
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"summary_wm_p05": 9446.0,
"summary_wm_p95": 15636.0,
"summary_wm_stdv": 2787.1699
}