Felix Hoffstaedter
4f19feb84a
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs03 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIs03",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
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"bids_meta": {
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"FileSize": 0.005850713700056076,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1,
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"acquisition": "r10x10x10",
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"dataset": "<unset>",
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"datatype": "anat",
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"extension": ".nii.gz",
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"modality": "T1w",
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"session": "s1Ax2",
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"subject": "cIIs03",
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"suffix": "T1w"
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},
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"cjv": 0.4874142857142857,
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"cnr": 1.535778049233102,
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"efc": 0.6542,
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"fber": -1.0,
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"fwhm_avg": 4.026613333333334,
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"fwhm_x": 3.79616,
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"fwhm_y": 3.99133,
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"fwhm_z": 4.29235,
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"icvs_csf": 0.2912312987942948,
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"icvs_gm": 0.3702991809278308,
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"icvs_wm": 0.33846952027787447,
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"inu_med": 0.8349130749702454,
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"inu_range": 0.18724220991134644,
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"provenance": {
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"md5sum": "3093fb5a0f8c3bd888e9deceba722524",
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"settings": {
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826",
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"warnings": {
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"large_rot_frame": true,
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"small_air_mask": false
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}
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},
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"qi_1": 0.0,
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"qi_2": 0.0017972078114263117,
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"rpve_csf": 6.155262231541339,
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"rpve_gm": 6.08260107832037,
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"rpve_wm": 6.221141014674286,
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"size_x": 256,
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"size_y": 256,
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"size_z": 150,
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"snr_csf": 1.3028668650022435,
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"snr_gm": 2.568539357016381,
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"snr_total": 4.159908187753737,
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"snr_wm": 8.608318341242587,
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"snrd_csf": 1.3468477049643017,
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"snrd_gm": 3.161667917585691,
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"snrd_total": 3.3423890079410707,
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"snrd_wm": 5.518651401273219,
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"spacing_x": 1.0,
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"spacing_y": 1.0,
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"spacing_z": 1.0,
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"summary_bg_k": 313.538,
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"summary_bg_mad": 0.0,
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"summary_bg_mean": 7.8141,
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"summary_bg_median": 0.0,
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"summary_bg_n": 3835599.0,
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"summary_bg_p05": 0.0,
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"summary_bg_p95": 0.0,
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"summary_bg_stdv": 114.7956,
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"summary_csf_k": -0.6314,
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"summary_csf_mad": 163.3172,
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"summary_csf_mean": 256.2768,
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"summary_csf_median": 236.0,
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"summary_csf_n": 454696.8060374237,
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"summary_csf_p05": 11.0,
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"summary_csf_p95": 573.0,
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"summary_csf_stdv": 181.1388,
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"summary_gm_k": 7.227,
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"summary_gm_mad": 123.1381,
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"summary_gm_mean": 549.1812,
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"summary_gm_median": 554.0,
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"summary_gm_n": 578144.7788861669,
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"summary_gm_p05": 163.0,
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"summary_gm_p95": 942.0,
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"summary_gm_stdv": 215.6866,
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"summary_wm_k": 1.8105,
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"summary_wm_mad": 78.164,
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"summary_wm_mean": 946.7951,
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"summary_wm_median": 967.0,
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"summary_wm_n": 528449.4161462822,
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"summary_wm_p05": 722.0,
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"summary_wm_p95": 1097.0,
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"summary_wm_stdv": 112.3331,
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"tpm_overlap_csf": 0.19114573427330733,
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"tpm_overlap_gm": 0.5239134082274055,
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"tpm_overlap_wm": 0.5290878361842155,
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"wm2max": 0.34669065008920497
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}
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