Felix Hoffstaedter
bfeb35ef56
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs02 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIs02",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
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"bids_meta": {
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"FileSize": 0.0054376935586333275,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1,
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"acquisition": "r10x10x10",
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"dataset": "<unset>",
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"datatype": "anat",
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"extension": ".nii.gz",
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"modality": "T1w",
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"session": "s1Ax2",
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"subject": "cIIs02",
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"suffix": "T1w"
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},
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"cjv": 0.5496275675675676,
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"cnr": 1.3234863544521411,
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"efc": 0.6523,
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"fber": -1.0,
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"fwhm_avg": 3.7871166666666665,
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"fwhm_x": 3.62962,
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"fwhm_y": 3.77613,
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"fwhm_z": 3.9556,
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"icvs_csf": 0.286757293590828,
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"icvs_gm": 0.3688990596526373,
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"icvs_wm": 0.34434364675653456,
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"inu_med": 0.941571831703186,
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"inu_range": 0.20427618026733407,
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"provenance": {
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"md5sum": "0c9232772872e5b9fc0fedbe5bcf1785",
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"settings": {
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826",
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"warnings": {
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"large_rot_frame": true,
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"small_air_mask": false
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}
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},
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"qi_1": 0.0,
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"qi_2": 0.0013162756579979881,
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"rpve_csf": 7.382921686061405,
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"rpve_gm": 7.280813541187398,
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"rpve_wm": 7.415533138577187,
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"size_x": 256,
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"size_y": 256,
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"size_z": 150,
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"snr_csf": 1.3715972038210746,
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"snr_gm": 2.671577872220739,
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"snr_total": 3.8545557457985016,
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"snr_wm": 7.520492161353691,
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"snrd_csf": 1.3686371064791094,
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"snrd_gm": 2.9974713814903686,
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"snrd_total": 3.096346305532586,
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"snrd_wm": 4.922930428628279,
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"spacing_x": 1.0,
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"spacing_y": 1.0,
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"spacing_z": 1.0,
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"summary_bg_k": 234.215,
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"summary_bg_mad": 0.0,
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"summary_bg_mean": 9.7901,
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"summary_bg_median": 0.0,
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"summary_bg_n": 3890471.0,
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"summary_bg_p05": 0.0,
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"summary_bg_p95": 0.0,
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"summary_bg_stdv": 125.8923,
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"summary_csf_k": -0.7707,
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"summary_csf_mad": 163.4778,
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"summary_csf_mean": 287.558,
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"summary_csf_median": 263.0,
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"summary_csf_n": 374687.9765753746,
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"summary_csf_p05": 26.0,
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"summary_csf_p95": 610.0,
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"summary_csf_stdv": 191.747,
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"summary_gm_k": 17.3114,
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"summary_gm_mad": 112.0749,
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"summary_gm_mean": 585.1335,
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"summary_gm_median": 576.0,
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"summary_gm_n": 482017.52949668,
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"summary_gm_p05": 205.0,
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"summary_gm_p95": 965.0,
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"summary_gm_stdv": 215.6027,
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"summary_wm_k": 0.3463,
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"summary_wm_mad": 91.2873,
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"summary_wm_mean": 918.9644,
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"summary_wm_median": 946.0,
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"summary_wm_n": 449932.4939015893,
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"summary_wm_p05": 679.0,
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"summary_wm_p95": 1084.0,
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"summary_wm_stdv": 125.7895,
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"tpm_overlap_csf": 0.19628044787976406,
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"tpm_overlap_gm": 0.5428549463561985,
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"tpm_overlap_wm": 0.539920203922149,
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"wm2max": 0.29650663015498585
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}
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