Felix Hoffstaedter
bfeb35ef56
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs02 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIs02",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
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"bids_meta": {
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"FileSize": 0.005284051410853863,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1,
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"acquisition": "r10x10x10",
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"dataset": "<unset>",
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"datatype": "anat",
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"extension": ".nii.gz",
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"modality": "T1w",
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"session": "s1Ax1",
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"subject": "cIIs02",
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"suffix": "T1w"
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},
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"cjv": 0.5768425824175824,
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"cnr": 1.3680644327866245,
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"efc": 0.655,
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"fber": -1.0,
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"fwhm_avg": 3.73392,
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"fwhm_x": 3.58448,
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"fwhm_y": 3.7047,
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"fwhm_z": 3.91258,
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"icvs_csf": 0.2863015097440025,
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"icvs_gm": 0.3683439600590946,
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"icvs_wm": 0.345354530196903,
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"inu_med": 0.8841119408607483,
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"inu_range": 0.19240929484367353,
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"provenance": {
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"md5sum": "ae8a079cd9e3536507696184964cd072",
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"settings": {
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826",
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"warnings": {
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"large_rot_frame": true,
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"small_air_mask": false
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}
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},
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"qi_1": 0.0,
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"qi_2": 0.0034705314097732212,
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"rpve_csf": 7.446568323048006,
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"rpve_gm": 7.342090545218961,
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"rpve_wm": 7.47405340936435,
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"size_x": 256,
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"size_y": 256,
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"size_z": 150,
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"snr_csf": 1.2958572644835493,
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"snr_gm": 2.686404524099882,
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"snr_total": 3.774883188180437,
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"snr_wm": 7.342387775957878,
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"snrd_csf": 1.819243790282857,
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"snrd_gm": 4.165490742036542,
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"snrd_total": 4.259340620106689,
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"snrd_wm": 6.793287328000669,
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"spacing_x": 1.0,
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"spacing_y": 1.0,
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"spacing_z": 1.0,
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"summary_bg_k": 456.0179,
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"summary_bg_mad": 0.0,
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"summary_bg_mean": 5.6112,
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"summary_bg_median": 0.0,
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"summary_bg_n": 4031986.0,
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"summary_bg_p05": 0.0,
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"summary_bg_p95": 0.0,
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"summary_bg_stdv": 90.7489,
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"summary_csf_k": -0.4067,
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"summary_csf_mad": 166.8181,
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"summary_csf_mean": 278.522,
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"summary_csf_median": 252.0,
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"summary_csf_n": 371081.97167517274,
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"summary_csf_p05": 13.0,
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"summary_csf_p95": 608.0,
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"summary_csf_stdv": 194.4656,
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"summary_gm_k": 19.7303,
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"summary_gm_mad": 114.6651,
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"summary_gm_mean": 583.4395,
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"summary_gm_median": 577.0,
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"summary_gm_n": 477419.07849381585,
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"summary_gm_p05": 207.0,
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"summary_gm_p95": 963.0,
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"summary_gm_stdv": 214.785,
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"summary_wm_k": 4.4856,
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"summary_wm_mad": 95.3056,
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"summary_wm_mean": 913.8733,
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"summary_wm_median": 941.0,
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"summary_wm_n": 447621.9496956542,
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"summary_wm_p05": 668.0,
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"summary_wm_p95": 1079.0,
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"summary_wm_stdv": 128.1598,
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"tpm_overlap_csf": 0.19468874159325655,
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"tpm_overlap_gm": 0.5424687084678611,
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"tpm_overlap_wm": 0.5395405972045387,
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"wm2max": 0.30108513285339805
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}
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