Felix Hoffstaedter
9d4cd44fac
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs01 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIs01",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
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"bids_meta": {
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"FileSize": 0.005597302690148354,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1,
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"acquisition": "r10x10x10",
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"dataset": "<unset>",
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"datatype": "anat",
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"extension": ".nii.gz",
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"modality": "T1w",
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"session": "s1Ax2",
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"subject": "cIIs01",
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"suffix": "T1w"
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},
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"cjv": 0.45681153846153844,
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"cnr": 1.9372740004398192,
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"efc": 0.7337,
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"fber": -1.0,
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"fwhm_avg": 4.0663100000000005,
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"fwhm_x": 3.87482,
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"fwhm_y": 4.05111,
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"fwhm_z": 4.273,
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"icvs_csf": 0.2910992504142659,
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"icvs_gm": 0.37244700424459737,
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"icvs_wm": 0.3364537453411368,
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"inu_med": 0.7562516927719116,
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"inu_range": 0.21910494565963745,
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"provenance": {
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"md5sum": "a3e5149bfdceda701e2c07a0d5e7dc20",
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"settings": {
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826",
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"warnings": {
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"large_rot_frame": true,
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"small_air_mask": false
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}
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},
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"qi_1": 0.0,
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"qi_2": 0.0010327359503662463,
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"rpve_csf": 5.440055213878013,
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"rpve_gm": 5.38231863284296,
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"rpve_wm": 5.534823260946747,
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"size_x": 256,
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"size_y": 256,
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"size_z": 150,
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"snr_csf": 1.4641805965710328,
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"snr_gm": 2.619501691778175,
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"snr_total": 4.496836762999062,
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"snr_wm": 9.406828000647977,
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"snrd_csf": 6.093102245256562,
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"snrd_gm": 12.279228952272767,
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"snrd_total": 13.643587724747519,
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"snrd_wm": 22.558431976713226,
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"spacing_x": 1.0,
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"spacing_y": 1.0,
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"spacing_z": 1.0,
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"summary_bg_k": 286.191,
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"summary_bg_mad": 0.0,
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"summary_bg_mean": 2.0962,
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"summary_bg_median": 0.0,
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"summary_bg_n": 4051988.0,
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"summary_bg_p05": 0.0,
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"summary_bg_p95": 0.0,
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"summary_bg_stdv": 28.1705,
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"summary_csf_k": -0.8036,
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"summary_csf_mad": 152.2984,
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"summary_csf_mean": 272.2334,
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"summary_csf_median": 262.0,
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"summary_csf_n": 511439.5510229441,
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"summary_csf_p05": 10.0,
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"summary_csf_p95": 572.0,
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"summary_csf_stdv": 178.9395,
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"summary_gm_k": 0.9734,
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"summary_gm_mad": 123.9716,
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"summary_gm_mean": 526.9924,
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"summary_gm_median": 528.0,
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"summary_gm_n": 654361.4535579113,
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"summary_gm_p05": 164.0,
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"summary_gm_p95": 875.0,
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"summary_gm_stdv": 201.5649,
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"summary_wm_k": 0.2534,
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"summary_wm_mad": 77.9391,
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"summary_wm_mean": 948.438,
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"summary_wm_median": 970.0,
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"summary_wm_n": 591123.9970985033,
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"summary_wm_p05": 743.0,
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"summary_wm_p95": 1081.0,
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"summary_wm_stdv": 103.1165,
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"tpm_overlap_csf": 0.2110203892850836,
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"tpm_overlap_gm": 0.5241555801316843,
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"tpm_overlap_wm": 0.5245060827324727,
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"wm2max": 0.40234197894693824
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}
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