Felix Hoffstaedter
fcc1b06ee4
=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIs00 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIs00",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
95 lines
2.5 KiB
(Stored with Git Annex)
JSON
{
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"bids_meta": {
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"FileSize": 0.006742347031831741,
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"FileSizeUnits": "GB",
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"NumberOfVolumes": 1,
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"acquisition": "r10x10x10",
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"dataset": "<unset>",
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"datatype": "anat",
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"extension": ".nii.gz",
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"modality": "T1w",
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"session": "s1Ax1",
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"subject": "cIIs00",
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"suffix": "T1w"
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},
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"cjv": 0.4279087682672234,
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"cnr": 1.928027256463419,
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"efc": 0.681,
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"fber": -1.0,
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"fwhm_avg": 3.8288966666666666,
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"fwhm_x": 3.67341,
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"fwhm_y": 3.70179,
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"fwhm_z": 4.11149,
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"icvs_csf": 0.2896229017074646,
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"icvs_gm": 0.3762095991378208,
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"icvs_wm": 0.3341674991547145,
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"inu_med": 0.824049174785614,
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"inu_range": 0.20450457334518424,
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"provenance": {
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"md5sum": "6eacf1271880544685b2a949394ee194",
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"settings": {
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"testing": false
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},
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"software": "mriqc",
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"version": "24.1.0.dev0+gd5b13cb5.d20240826",
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"warnings": {
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"large_rot_frame": true,
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"small_air_mask": false
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}
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},
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"qi_1": 0.0,
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"qi_2": 0.0004870433223549876,
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"rpve_csf": 5.626445218378296,
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"rpve_gm": 5.573486863282213,
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"rpve_wm": 5.74119719211294,
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"size_x": 256,
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"size_y": 256,
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"size_z": 150,
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"snr_csf": 1.5584718100342096,
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"snr_gm": 2.548559518850891,
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"snr_total": 4.2011760009843995,
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"snr_wm": 8.496496674068098,
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"snrd_csf": 1.6260596799592464,
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"snrd_gm": 2.9902445799999624,
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"snrd_total": 3.5079040286761276,
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"snrd_wm": 5.907407826069172,
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"spacing_x": 1.0,
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"spacing_y": 1.0,
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"spacing_z": 1.0,
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"summary_bg_k": 214.0808,
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"summary_bg_mad": 0.0,
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"summary_bg_mean": 10.0811,
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"summary_bg_median": 0.0,
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"summary_bg_n": 3429473.0,
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"summary_bg_p05": 0.0,
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"summary_bg_p95": 0.0,
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"summary_bg_stdv": 107.5738,
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"summary_csf_k": -0.321,
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"summary_csf_mad": 147.5003,
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"summary_csf_mean": 271.6963,
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"summary_csf_median": 267.0,
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"summary_csf_n": 491175.24422342674,
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"summary_csf_p05": 11.0,
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"summary_csf_p95": 551.0,
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"summary_csf_stdv": 171.3215,
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"summary_gm_k": -0.1877,
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"summary_gm_mad": 121.0782,
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"summary_gm_mean": 490.3438,
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"summary_gm_median": 491.0,
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"summary_gm_n": 638018.7500585148,
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"summary_gm_p05": 141.0,
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"summary_gm_p95": 807.0,
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"summary_gm_stdv": 192.6577,
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"summary_wm_k": 0.2569,
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"summary_wm_mad": 83.8901,
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"summary_wm_mean": 941.5615,
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"summary_wm_median": 970.0,
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"summary_wm_n": 566719.0061324433,
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"summary_wm_p05": 712.0,
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"summary_wm_p95": 1083.0,
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"summary_wm_stdv": 114.1646,
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"tpm_overlap_csf": 0.21596766625144898,
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"tpm_overlap_gm": 0.5290004730008051,
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"tpm_overlap_wm": 0.5201022476952905,
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"wm2max": 0.37170804068082736
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}
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