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ds003416-mriqc/logs/sub-cIVs108_10066419.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_470343/ds (dataset)
install(ok): /var/lib/condor/execute/dir_470343/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_470343/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_470343/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:57:26 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:57:26 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:26 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:57:26 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:57:26 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:26 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215725_067873ed-6bd6-42d3-8d78-c100079868b5.toml.
2025-10-09 21:57:31 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:57:32 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:57:33 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:57:33 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:57:38 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:57:43 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:57:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/03077eb7c902458333bb93660dcd9b4a2f2dcf14/conform".
2025-10-09 21:57:43 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:57:44 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.674656s.
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/load_bmat".
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.17854s.
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/sanitize".
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023555s.
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/682b19a85a79d9a8331de5d1a961eb312b3c1815/provenance".
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020356s.
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/load_bmat".
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.05234s.
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/sanitize".
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023173s.
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fac4474cb1812bfa17f5995bdea2af7988ecb903/provenance".
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020145s.
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/load_bmat".
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024274s.
2025-10-09 21:57:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/sanitize".
2025-10-09 21:57:55 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:55 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.02321s.
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/provenance".
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.026004s.
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/load_bmat".
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.0229s.
2025-10-09 21:57:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/sanitize".
2025-10-09 21:57:59 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:59 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023712s.
2025-10-09 21:58:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7e9cbe077498b6a9d360d798306d3d238430db00/provenance".
2025-10-09 21:58:01 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:01 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.026236s.
2025-10-09 21:58:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/pre_clip".
2025-10-09 21:58:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 10.97566s.
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/03077eb7c902458333bb93660dcd9b4a2f2dcf14/RotationMask".
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.355398s.
2025-10-09 21:58:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotMosaicNoise".
2025-10-09 21:58:15 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.195795s.
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/shells".
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000731s.
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/piesno".
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:27 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 4.395373s.
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/shells".
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000659s.
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/piesno".
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.009364s.
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/shells".
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000701s.
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/piesno".
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.644902s.
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/shells".
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000707s.
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/piesno".
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 2.747036s.
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/pre_n4".
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 135.288026s.
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_background".
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009159s.
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/dwi_ref".
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:00 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.567408s.
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/get_lowb".
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.340373s.
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/dwi_ref".
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:04 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.375877s.
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/get_lowb".
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.357753s.
2025-10-09 22:01:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/dwi_ref".
2025-10-09 22:01:07 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:09 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.646522s.
2025-10-09 22:01:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/get_lowb".
2025-10-09 22:01:09 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:10 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.514169s.
2025-10-09 22:01:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/dwi_ref".
2025-10-09 22:01:11 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:12 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.126237s.
2025-10-09 22:01:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/get_lowb".
2025-10-09 22:01:13 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:14 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.495902s.
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/synthstrip".
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:03:00 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 104.869574s.
2025-10-09 22:03:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/pre_clip".
2025-10-09 22:03:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:02 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.678454s.
2025-10-09 22:03:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/SharpenEPI".
2025-10-09 22:03:03 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:11 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.113127s.
2025-10-09 22:03:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/hmc_b0".
2025-10-09 22:03:13 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:35 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.011671s.
2025-10-09 22:03:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/pre_clip".
2025-10-09 22:03:37 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:38 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.678313s.
2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/SharpenEPI".
2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.006047s.
2025-10-09 22:03:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/hmc_b0".
2025-10-09 22:03:49 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:11 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.959341s.
2025-10-09 22:04:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/pre_clip".
2025-10-09 22:04:13 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.745157s.
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/SharpenEPI".
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:23 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.197494s.
2025-10-09 22:04:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/hmc_b0".
2025-10-09 22:04:25 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:54 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.310214s.
2025-10-09 22:04:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/pre_clip".
2025-10-09 22:04:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:56 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.670109s.
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/SharpenEPI".
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:05 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.898968s.
2025-10-09 22:05:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/hmc_b0".
2025-10-09 22:05:07 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:35 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.167385s.
2025-10-09 22:05:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/post_n4".
2025-10-09 22:05:37 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 27.966158s.
2025-10-09 22:06:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/03077eb7c902458333bb93660dcd9b4a2f2dcf14/smoothness".
2025-10-09 22:06:07 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:06:13 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.480015s.
2025-10-09 22:06:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotMosaicZoomed".
2025-10-09 22:06:13 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.783542s.
2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotBrainmask".
2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:06:24 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.242506s.
2025-10-09 22:06:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/pre_n4".
2025-10-09 22:06:25 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:33 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.848825s.
2025-10-09 22:06:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/pre_n4".
2025-10-09 22:06:35 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.823069s.
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/pre_n4".
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.939003s.
2025-10-09 22:06:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/pre_n4".
2025-10-09 22:06:53 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:01 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.945347s.
2025-10-09 22:07:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/final_masked".
2025-10-09 22:07:03 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.316746s.
2025-10-09 22:07:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization".
2025-10-09 22:07:05 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:07:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:08:29 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:08:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:08:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:08:48 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:08:50 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:08:50 | INFO | niworkflows | Generating visual report
2025-10-09 22:09:11 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 125.805756s.
2025-10-09 22:09:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_zoomed".
2025-10-09 22:09:11 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:11 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005891s.
2025-10-09 22:09:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_bmask".
2025-10-09 22:09:12 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:12 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.0057s.
2025-10-09 22:09:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/synthstrip".
2025-10-09 22:09:12 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 58.302313s.
2025-10-09 22:10:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/synthstrip".
2025-10-09 22:10:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 59.025897s.
2025-10-09 22:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/synthstrip".
2025-10-09 22:11:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:12:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 57.583402s.
2025-10-09 22:12:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/synthstrip".
2025-10-09 22:12:09 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:13:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 56.239564s.
2025-10-09 22:13:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_norm".
2025-10-09 22:13:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:13:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005334s.
2025-10-09 22:13:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/post_n4".
2025-10-09 22:13:08 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:13:10 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.538846s.
2025-10-09 22:13:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/sp_mask".
2025-10-09 22:13:11 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:13:12 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.692172s.
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/drift".
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:13:14 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0357, 1.0345, 1.0386, 1.0435, 1.0373, 0.9817.
2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.671737s.
2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/EPI2MNI".
2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:13:15 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:13:48 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/EPI2MNI/stderr.nipype-init).
2025-10-09 22:13:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:13:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:15:03 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:15:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:15:03 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:22 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.549572s.
2025-10-09 22:15:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/post_n4".
2025-10-09 22:15:24 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:15:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.51286s.
2025-10-09 22:15:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/sp_mask".
2025-10-09 22:15:28 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:15:28 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.657181s.
2025-10-09 22:15:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/drift".
2025-10-09 22:15:30 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:15:30 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0019, 0.9982, 1.0014, 0.9787, 0.9689, 0.9929.
2025-10-09 22:15:31 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.6409310000000001s.
2025-10-09 22:15:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/EPI2MNI".
2025-10-09 22:15:32 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:15:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:16:02 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/EPI2MNI/stderr.nipype-init).
2025-10-09 22:16:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:16:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:17:19 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:17:19 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:17:19 | INFO | niworkflows | Generating visual report
2025-10-09 22:17:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.921604s.
2025-10-09 22:17:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/post_n4".
2025-10-09 22:17:40 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.585092s.
2025-10-09 22:17:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/sp_mask".
2025-10-09 22:17:44 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:17:45 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.984716s.
2025-10-09 22:17:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/drift".
2025-10-09 22:17:46 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:17:46 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9969, 0.9969, 1.0031, 0.9933, 0.9865, 0.9982, 1.0001, 0.9872.
2025-10-09 22:17:48 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.190585s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/EPI2MNI".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:17:50 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:18:25 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/EPI2MNI/stderr.nipype-init).
2025-10-09 22:18:25 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:18:25 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:19:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:19:43 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:19:43 | INFO | niworkflows | Generating visual report
2025-10-09 22:20:03 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 133.029314s.
2025-10-09 22:20:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/post_n4".
2025-10-09 22:20:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:20:06 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.59255s.
2025-10-09 22:20:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/sp_mask".
2025-10-09 22:20:08 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:20:09 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.168693s.
2025-10-09 22:20:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/drift".
2025-10-09 22:20:10 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:20:10 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9992, 0.9987, 1.0048, 0.9886, 0.9979, 0.9776, 0.9982, 0.9806.
2025-10-09 22:20:12 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.245638s.
2025-10-09 22:20:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/EPI2MNI".
2025-10-09 22:20:14 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:20:14 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:20:47 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:20:47 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/SharpenEPI/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:22:07 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:22:07 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:22:07 | INFO | niworkflows | Generating visual report
2025-10-09 22:22:27 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 133.250889s.
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/final_masked".
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038823s.
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/dwidenoise".
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:53 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 22.868661s.
2025-10-09 22:22:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/682b19a85a79d9a8331de5d1a961eb312b3c1815/ResampleSegmentation".
2025-10-09 22:22:54 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:58 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.213199s.
2025-10-09 22:23:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/final_masked".
2025-10-09 22:23:00 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:00 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039284s.
2025-10-09 22:23:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/dwidenoise".
2025-10-09 22:23:02 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:24 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 22.402187s.
2025-10-09 22:23:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fac4474cb1812bfa17f5995bdea2af7988ecb903/ResampleSegmentation".
2025-10-09 22:23:26 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:30 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.037024s.
2025-10-09 22:23:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/final_masked".
2025-10-09 22:23:32 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:32 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039405s.
2025-10-09 22:23:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/dwidenoise".
2025-10-09 22:23:34 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:24:14 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 40.500543s.
2025-10-09 22:24:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ResampleSegmentation".
2025-10-09 22:24:16 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:20 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.33683s.
2025-10-09 22:24:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/7e9cbe077498b6a9d360d798306d3d238430db00/final_masked".
2025-10-09 22:24:22 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:22 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.048644s.
2025-10-09 22:24:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/dwidenoise".
2025-10-09 22:24:24 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 40.565386s.
2025-10-09 22:25:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/7e9cbe077498b6a9d360d798306d3d238430db00/ResampleSegmentation".
2025-10-09 22:25:06 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.069166s.
2025-10-09 22:25:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/dwimodel".
2025-10-09 22:25:12 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:16 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.133161s.
2025-10-09 22:25:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/682b19a85a79d9a8331de5d1a961eb312b3c1815/estimate_sigma".
2025-10-09 22:25:18 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:18 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.044166s.
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/get_wm".
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.04398s.
2025-10-09 22:25:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/dwimodel".
2025-10-09 22:25:22 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:26 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.111312s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fac4474cb1812bfa17f5995bdea2af7988ecb903/estimate_sigma".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.046375s.
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/get_wm".
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.040177s.
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/dwimodel".
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:36 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.503223s.
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/estimate_sigma".
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042287s.
2025-10-09 22:25:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/get_wm".
2025-10-09 22:25:40 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:40 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041948s.
2025-10-09 22:25:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/dwimodel".
2025-10-09 22:25:42 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.587686s.
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7e9cbe077498b6a9d360d798306d3d238430db00/estimate_sigma".
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.04413s.
2025-10-09 22:25:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/get_wm".
2025-10-09 22:25:50 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:50 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.040654s.
2025-10-09 22:25:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/cc_mask".
2025-10-09 22:25:52 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:52 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.584619s.
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_fa".
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:55 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.542936s.
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_md".
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.968524s.
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/plot_heatmap".
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:01 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.370214s.
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/cc_mask".
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.595677s.
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_fa".
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.845746s.
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_md".
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.01944s.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/plot_heatmap".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.290404s.
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/cc_mask".
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.579548s.
2025-10-09 22:26:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_fa".
2025-10-09 22:26:16 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.752556s.
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_md".
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:20 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.830028s.
2025-10-09 22:26:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/plot_heatmap".
2025-10-09 22:26:22 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.413282s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/cc_mask".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.603514s.
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_fa".
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:28 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 2.16176s.
2025-10-09 22:26:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_md".
2025-10-09 22:26:30 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:32 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.7164350000000002s.
2025-10-09 22:26:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/plot_heatmap".
2025-10-09 22:26:32 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:33 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.396587s.
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_fa".
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005763s.
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_md".
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005453s.
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_hm".
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005227s.
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_fa".
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005499s.
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_md".
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005188s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_hm".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005302s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_fa".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005152s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_md".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005235s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_hm".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005335s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_fa".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.0056s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_md".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005705s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_hm".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005248s.
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:45 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 9.535222s.
2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 9.376444s.
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:27:05 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 9.472547s.
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/03077eb7c902458333bb93660dcd9b4a2f2dcf14/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/03077eb7c902458333bb93660dcd9b4a2f2dcf14/Enhance".
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.668697s.
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/03077eb7c902458333bb93660dcd9b4a2f2dcf14/format_tpm_names".
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:12 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.9868839999999999s.
2025-10-09 22:27:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/03077eb7c902458333bb93660dcd9b4a2f2dcf14/Grad".
2025-10-09 22:27:14 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:21 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.274745s.
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/03077eb7c902458333bb93660dcd9b4a2f2dcf14/apply_mask".
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.317431s.
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/03077eb7c902458333bb93660dcd9b4a2f2dcf14/GradientThreshold".
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:40 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.750531s.
2025-10-09 22:27:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/03077eb7c902458333bb93660dcd9b4a2f2dcf14/segmentation".
2025-10-09 22:27:40 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 96.986779s.
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ArtifactMask".
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.655516s.
2025-10-09 22:29:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotHeadmask".
2025-10-09 22:29:26 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:29 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.396117s.
2025-10-09 22:29:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/03077eb7c902458333bb93660dcd9b4a2f2dcf14/harmonize".
2025-10-09 22:29:30 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:29:31 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.229187s.
2025-10-09 22:29:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotSegmentation".
2025-10-09 22:29:32 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.815432s.
2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/03077eb7c902458333bb93660dcd9b4a2f2dcf14/provenance".
2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.073474s.
2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ComputeQI2".
2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:29:47 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.622279s.
2025-10-09 22:29:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotAirmask".
2025-10-09 22:29:48 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:51 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.418109s.
2025-10-09 22:29:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/PlotArtmask".
2025-10-09 22:29:52 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.2568070000000002s.
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_headmask".
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.005103s.
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/03077eb7c902458333bb93660dcd9b4a2f2dcf14/measures".
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:30:00 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1918)
2025-10-09 22:30:00 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1918)
2025-10-09 22:30:00 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1918)
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.320916s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_segm".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004882s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_noisefit".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005865s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_airmask".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.005851s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/03077eb7c902458333bb93660dcd9b4a2f2dcf14/ds_report_artmask".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.005528s.
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/03077eb7c902458333bb93660dcd9b4a2f2dcf14/datasink".
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000693s.
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/averages/mapflow/_averages0".
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.291636s.
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/averages/mapflow/_averages1".
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.287025s.
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/averages/mapflow/_averages0".
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/averages/mapflow/_averages1".
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/682b19a85a79d9a8331de5d1a961eb312b3c1815/motion_correct".
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:32:59 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 165.183163s.
2025-10-09 22:33:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/682b19a85a79d9a8331de5d1a961eb312b3c1815/ComputeFD".
2025-10-09 22:33:00 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:33:00 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00132s.
2025-10-09 22:33:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/682b19a85a79d9a8331de5d1a961eb312b3c1815/bvec_rot".
2025-10-09 22:33:02 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:33:02 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017817s.
2025-10-09 22:33:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/stddev/mapflow/_stddev0".
2025-10-09 22:33:04 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:04 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.437608s.
2025-10-09 22:33:06 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/stddev/mapflow/_stddev1".
2025-10-09 22:33:06 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:06 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.425512s.
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/stddev/mapflow/_stddev0".
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/stddev/mapflow/_stddev1".
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/averages/mapflow/_averages0".
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.302828s.
2025-10-09 22:33:12 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/averages/mapflow/_averages1".
2025-10-09 22:33:12 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:12 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.300948s.
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/averages/mapflow/_averages0".
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/averages/mapflow/_averages1".
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:33:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/fac4474cb1812bfa17f5995bdea2af7988ecb903/motion_correct".
2025-10-09 22:33:16 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:35:56 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 159.942059s.
2025-10-09 22:35:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/fac4474cb1812bfa17f5995bdea2af7988ecb903/ComputeFD".
2025-10-09 22:35:56 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:35:56 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001231s.
2025-10-09 22:35:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/fac4474cb1812bfa17f5995bdea2af7988ecb903/bvec_rot".
2025-10-09 22:35:58 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:35:58 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.01764s.
2025-10-09 22:36:00 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/stddev/mapflow/_stddev0".
2025-10-09 22:36:00 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:36:00 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.430779s.
2025-10-09 22:36:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/stddev/mapflow/_stddev1".
2025-10-09 22:36:02 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:36:02 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.430867s.
2025-10-09 22:36:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/stddev/mapflow/_stddev0".
2025-10-09 22:36:04 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:36:04 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:36:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/stddev/mapflow/_stddev1".
2025-10-09 22:36:04 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:36:04 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:36:06 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/averages/mapflow/_averages0".
2025-10-09 22:36:06 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:36:06 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.389668s.
2025-10-09 22:36:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/averages/mapflow/_averages1".
2025-10-09 22:36:08 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:36:08 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.38368s.
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/averages/mapflow/_averages0".
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/averages/mapflow/_averages1".
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:36:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/motion_correct".
2025-10-09 22:36:12 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 249.145681s.
2025-10-09 22:40:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ComputeFD".
2025-10-09 22:40:22 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:40:22 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005473s.
2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/bvec_rot".
2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020235s.
2025-10-09 22:40:26 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/stddev/mapflow/_stddev0".
2025-10-09 22:40:26 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.563106s.
2025-10-09 22:40:28 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/stddev/mapflow/_stddev1".
2025-10-09 22:40:28 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.546939s.
2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/stddev/mapflow/_stddev0".
2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/stddev/mapflow/_stddev1".
2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:40:32 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/averages/mapflow/_averages0".
2025-10-09 22:40:32 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:33 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.386324s.
2025-10-09 22:40:34 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/averages/mapflow/_averages1".
2025-10-09 22:40:34 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:35 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.388704s.
2025-10-09 22:40:36 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/averages/mapflow/_averages0".
2025-10-09 22:40:36 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:40:36 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:40:36 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/averages/mapflow/_averages1".
2025-10-09 22:40:36 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:40:36 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:40:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/7e9cbe077498b6a9d360d798306d3d238430db00/motion_correct".
2025-10-09 22:40:38 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:47 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 249.2418s.
2025-10-09 22:44:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/7e9cbe077498b6a9d360d798306d3d238430db00/ComputeFD".
2025-10-09 22:44:48 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:44:48 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00137s.
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/7e9cbe077498b6a9d360d798306d3d238430db00/bvec_rot".
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020462s.
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/stddev/mapflow/_stddev0".
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:44:53 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.540415s.
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/stddev/mapflow/_stddev1".
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.541545s.
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/stddev/mapflow/_stddev0".
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/stddev/mapflow/_stddev1".
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.566198s.
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.607048s.
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.231619s.
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.643852s.
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/682b19a85a79d9a8331de5d1a961eb312b3c1815/measures".
2025-10-09 22:45:12 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:17 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.22234s.
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/682b19a85a79d9a8331de5d1a961eb312b3c1815/datasink".
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000537s.
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:19 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/stddev/mapflow/_stddev0/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/averages/mapflow/_averages0/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:19 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.470686s.
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:36 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/stddev/mapflow/_stddev1/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/682b19a85a79d9a8331de5d1a961eb312b3c1815/averages/mapflow/_averages1/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:36 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.663062s.
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.485533s.
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.668552s.
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:04 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.152893s.
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.526411s.
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fac4474cb1812bfa17f5995bdea2af7988ecb903/measures".
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:16 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.037155s.
2025-10-09 22:46:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fac4474cb1812bfa17f5995bdea2af7988ecb903/datasink".
2025-10-09 22:46:18 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:18 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000523s.
2025-10-09 22:46:18 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:18 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:18 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/stddev/mapflow/_stddev0/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/averages/mapflow/_averages0/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:18 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.250961s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:38 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/stddev/mapflow/_stddev1/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/fac4474cb1812bfa17f5995bdea2af7988ecb903/averages/mapflow/_averages1/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:38 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.115918s.
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.440752s.
2025-10-09 22:47:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:02 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.544537s.
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:08 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.474336s.
2025-10-09 22:47:08 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:08 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.825711s.
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/measures".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:22 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.56515s.
2025-10-09 22:47:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/datasink".
2025-10-09 22:47:22 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:22 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000524s.
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:23 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/stddev/mapflow/_stddev0/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/averages/mapflow/_averages0/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:23 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.19511s.
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:42 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/stddev/mapflow/_stddev1/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/averages/mapflow/_averages1/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:42 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:01 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.728616s.
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.447034s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.542008s.
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:48:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:10 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.4567269999999999s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.70244s.
2025-10-09 22:48:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:18 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:48:18 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:48:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:18 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:48:18 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:48:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7e9cbe077498b6a9d360d798306d3d238430db00/measures".
2025-10-09 22:48:20 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.317365s.
2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/7e9cbe077498b6a9d360d798306d3d238430db00/datasink".
2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000467s.
2025-10-09 22:48:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:27 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:27 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/stddev/mapflow/_stddev0/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/averages/mapflow/_averages0/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:27 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.03257s.
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:46 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/stddev/mapflow/_stddev1/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/7e9cbe077498b6a9d360d798306d3d238430db00/averages/mapflow/_averages1/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:46 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.803125s.
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005285s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005205s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005099s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005009s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005775s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005098s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005069s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00511s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004977s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.00489s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005014s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00503s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005012s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005036s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004822s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004648s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004714s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/682b19a85a79d9a8331de5d1a961eb312b3c1815/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004473s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004883s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004567s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004877s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fac4474cb1812bfa17f5995bdea2af7988ecb903/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005631s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004785s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004362s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004786s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fa0d73ca41a335780e69a6501f1ccf8f3030a20/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004513s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004686s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004371s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005052s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004867s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004781s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/7e9cbe077498b6a9d360d798306d3d238430db00/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004327s.
2025-10-09 22:49:15 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:49:16 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:49:16 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 22s per subject.
2025-10-09 22:49:16 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 51min 50s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/anat/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs108 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_470343/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215725_067873ed-6bd6-42d3-8d78-c100079868b5.toml (file)
add(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_info.json (file)
add(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_stderr (file)
add(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_stdout (file)
add(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_usage.json (file)
add(ok): logs/mriqc-20251009-215725_067873ed-6bd6-42d3-8d78-c100079868b5.log (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-md_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-fa_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-md_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-fa_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-md_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-fa_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-md_dwi.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs108/ses-s1Bx1/anat/sub-cIVs108_ses-s1Bx1_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi.json (file)
add(ok): sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi.json (file)
add(ok): sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.json (file)
add(ok): sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi.json (file)
add(ok): sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi.html (file)
add(ok): sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi.html (file)
add(ok): sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.html (file)
add(ok): sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi.html (file)
add(ok): sub-cIVs108_ses-s1Bx1_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215725_067873ed-6bd6-42d3-8d78-c100079868b5.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs108_2025.10.09T23.57.24-592804_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215725_067873ed-6bd6-42d3-8d78-c100079868b5.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs108/figures/sub-cIVs108_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs108/ses-s1Bx1/dwi/sub-cIVs108_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.json (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs108_ses-s1Bx1_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000921 seconds
flock: executing git
SUCCESS
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