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ds003416-mriqc/logs/sub-cIVs089_10066460.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_3950077/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3950077/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3950077/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3950077/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:57:15 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:57:15 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:15 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:57:16 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:57:16 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:16 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215714_54bf6884-1fe8-430b-9ab7-e3599011aaed.toml.
2025-10-09 21:57:20 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:57:21 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:57:22 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:57:23 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:57:27 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:57:32 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:57:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/7209940975b0a939a83d3c1b237ee993d3c2d8d0/conform".
2025-10-09 21:57:32 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:57:33 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.715351s.
2025-10-09 21:57:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/load_bmat".
2025-10-09 21:57:34 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:34 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.227148s.
2025-10-09 21:57:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/sanitize".
2025-10-09 21:57:36 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:37 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.810262s.
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b453533e3db0433dd3cd8bfa5a477343dcf01028/provenance".
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.019729s.
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/load_bmat".
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023129s.
2025-10-09 21:57:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/sanitize".
2025-10-09 21:57:40 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.818306s.
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0fa3251e4610ac70664fd776af2b9f298b429a10/provenance".
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.019947s.
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/load_bmat".
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023831s.
2025-10-09 21:57:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/sanitize".
2025-10-09 21:57:44 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.061096s.
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3aed28124a56ae1d1b21574d3242208a1f285401/provenance".
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.026008s.
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/load_bmat".
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023547s.
2025-10-09 21:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/sanitize".
2025-10-09 21:57:48 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.160662s.
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/041b552f1fc03cddd14af2e0c110d1a8065e3076/provenance".
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025386s.
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/pre_clip".
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.291209s.
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/7209940975b0a939a83d3c1b237ee993d3c2d8d0/RotationMask".
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:58:03 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.072402s.
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotMosaicNoise".
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.518923s.
2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/shells".
2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000708s.
2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/piesno".
2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.050244s.
2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/shells".
2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000632s.
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/piesno".
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.992387s.
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/shells".
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000746s.
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/piesno".
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.325957s.
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/shells".
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000792s.
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/piesno".
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:25 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.315871s.
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/pre_n4".
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 133.417052s.
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_background".
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009157s.
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/dwi_ref".
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:43 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.622051s.
2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/get_lowb".
2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.356305s.
2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/dwi_ref".
2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:47 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.579337s.
2025-10-09 22:00:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/get_lowb".
2025-10-09 22:00:48 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.502347s.
2025-10-09 22:00:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/dwi_ref".
2025-10-09 22:00:50 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:51 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.2247s.
2025-10-09 22:00:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/get_lowb".
2025-10-09 22:00:52 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.45195s.
2025-10-09 22:00:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/dwi_ref".
2025-10-09 22:00:54 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:55 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.163725s.
2025-10-09 22:00:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/get_lowb".
2025-10-09 22:00:56 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:57 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.502957s.
2025-10-09 22:00:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/synthstrip".
2025-10-09 22:00:58 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:02:39 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 100.981905s.
2025-10-09 22:02:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/pre_clip".
2025-10-09 22:02:40 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:41 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.712065s.
2025-10-09 22:02:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/SharpenEPI".
2025-10-09 22:02:42 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:50 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.226739s.
2025-10-09 22:02:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/hmc_b0".
2025-10-09 22:02:52 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:15 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.898552s.
2025-10-09 22:03:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/pre_clip".
2025-10-09 22:03:16 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:17 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.677935s.
2025-10-09 22:03:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/SharpenEPI".
2025-10-09 22:03:18 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:26 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.113089s.
2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/hmc_b0".
2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:50 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.237766s.
2025-10-09 22:03:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/pre_clip".
2025-10-09 22:03:52 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:53 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.660538s.
2025-10-09 22:03:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/SharpenEPI".
2025-10-09 22:03:54 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.821014s.
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/hmc_b0".
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:30 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.9529s.
2025-10-09 22:04:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/pre_clip".
2025-10-09 22:04:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:33 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.697775s.
2025-10-09 22:04:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/SharpenEPI".
2025-10-09 22:04:34 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:42 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.866581s.
2025-10-09 22:04:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/hmc_b0".
2025-10-09 22:04:42 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:10 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.196433s.
2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/post_n4".
2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 28.604013s.
2025-10-09 22:05:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7209940975b0a939a83d3c1b237ee993d3c2d8d0/smoothness".
2025-10-09 22:05:42 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:05:48 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.5797989999999995s.
2025-10-09 22:05:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotMosaicZoomed".
2025-10-09 22:05:48 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:05:54 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.996009s.
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotBrainmask".
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:06:01 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.196223s.
2025-10-09 22:06:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/pre_n4".
2025-10-09 22:06:02 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.977362s.
2025-10-09 22:06:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/pre_n4".
2025-10-09 22:06:12 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.98831s.
2025-10-09 22:06:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/pre_n4".
2025-10-09 22:06:22 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:30 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.890503s.
2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/pre_n4".
2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.053648s.
2025-10-09 22:06:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/final_masked".
2025-10-09 22:06:42 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.357077s.
2025-10-09 22:06:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization".
2025-10-09 22:06:44 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:06:45 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:08:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:08:10 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:08:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:08:31 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:08:31 | INFO | niworkflows | Generating visual report
2025-10-09 22:08:52 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 127.619549s.
2025-10-09 22:08:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_zoomed".
2025-10-09 22:08:52 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:08:52 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005743s.
2025-10-09 22:08:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_bmask".
2025-10-09 22:08:53 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:08:53 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00575s.
2025-10-09 22:08:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/synthstrip".
2025-10-09 22:08:53 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:39 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.683218s.
2025-10-09 22:09:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/synthstrip".
2025-10-09 22:09:40 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 51.367966s.
2025-10-09 22:10:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/synthstrip".
2025-10-09 22:10:32 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.902519s.
2025-10-09 22:11:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/synthstrip".
2025-10-09 22:11:22 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:12:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.80014s.
2025-10-09 22:12:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_norm".
2025-10-09 22:12:10 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:12:10 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005552s.
2025-10-09 22:12:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/post_n4".
2025-10-09 22:12:11 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:12:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.736236s.
2025-10-09 22:12:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/sp_mask".
2025-10-09 22:12:14 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:12:15 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.753336s.
2025-10-09 22:12:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/drift".
2025-10-09 22:12:16 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:12:17 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.998, 0.9991, 1.0059, 1.0037, 1.0017, 0.9891.
2025-10-09 22:12:18 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.774086s.
2025-10-09 22:12:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/EPI2MNI".
2025-10-09 22:12:18 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:12:18 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:12:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:12:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:14:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:14:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:14:08 | INFO | niworkflows | Generating visual report
2025-10-09 22:14:27 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.104565s.
2025-10-09 22:14:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/post_n4".
2025-10-09 22:14:28 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:14:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.5634360000000003s.
2025-10-09 22:14:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/sp_mask".
2025-10-09 22:14:33 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:14:33 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.62096s.
2025-10-09 22:14:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/drift".
2025-10-09 22:14:34 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:14:35 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9985, 0.9957, 1.004, 0.9971, 0.9934, 0.995.
2025-10-09 22:14:36 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.654138s.
2025-10-09 22:14:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/EPI2MNI".
2025-10-09 22:14:36 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:14:36 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:15:06 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/EPI2MNI/stderr.nipype-init).
2025-10-09 22:15:06 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:15:06 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:16:21 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:16:21 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:16:21 | INFO | niworkflows | Generating visual report
2025-10-09 22:16:40 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 123.753697s.
2025-10-09 22:16:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/post_n4".
2025-10-09 22:16:41 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:16:43 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.61966s.
2025-10-09 22:16:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/sp_mask".
2025-10-09 22:16:45 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:16:46 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.970563s.
2025-10-09 22:16:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/drift".
2025-10-09 22:16:47 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:16:47 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9987, 0.9983, 1.0036, 1.0002, 1.0004, 0.9972, 1.0008, 0.9965.
2025-10-09 22:16:49 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.128398s.
2025-10-09 22:16:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/EPI2MNI".
2025-10-09 22:16:51 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:16:51 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:17:21 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/EPI2MNI/stderr.nipype-init).
2025-10-09 22:17:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:17:21 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:18:32 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:18:32 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:18:32 | INFO | niworkflows | Generating visual report
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 121.058579s.
2025-10-09 22:18:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/post_n4".
2025-10-09 22:18:53 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:18:55 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.605148s.
2025-10-09 22:18:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/sp_mask".
2025-10-09 22:18:57 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:18:58 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.949033s.
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/drift".
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:18:59 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0016, 0.9971, 0.9822, 1.0006, 0.9984, 0.9979, 0.9988, 0.9922.
2025-10-09 22:19:01 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.112182s.
2025-10-09 22:19:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/EPI2MNI".
2025-10-09 22:19:03 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:19:03 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:19:35 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:19:35 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/SharpenEPI/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:20:53 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:20:53 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:20:53 | INFO | niworkflows | Generating visual report
2025-10-09 22:21:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 130.771191s.
2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/final_masked".
2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.041185s.
2025-10-09 22:21:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/dwidenoise".
2025-10-09 22:21:17 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:21:41 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.162195s.
2025-10-09 22:21:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b453533e3db0433dd3cd8bfa5a477343dcf01028/ResampleSegmentation".
2025-10-09 22:21:43 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:21:47 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.503847s.
2025-10-09 22:21:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/final_masked".
2025-10-09 22:21:49 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:49 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.047275s.
2025-10-09 22:21:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/dwidenoise".
2025-10-09 22:21:51 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:15 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.108685s.
2025-10-09 22:22:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0fa3251e4610ac70664fd776af2b9f298b429a10/ResampleSegmentation".
2025-10-09 22:22:17 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.128108s.
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3aed28124a56ae1d1b21574d3242208a1f285401/final_masked".
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.03874s.
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/dwidenoise".
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:08 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.528706s.
2025-10-09 22:23:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3aed28124a56ae1d1b21574d3242208a1f285401/ResampleSegmentation".
2025-10-09 22:23:09 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.170043s.
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/final_masked".
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037229s.
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/dwidenoise".
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 42.551742s.
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/041b552f1fc03cddd14af2e0c110d1a8065e3076/ResampleSegmentation".
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.750921s.
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/dwimodel".
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.282992s.
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b453533e3db0433dd3cd8bfa5a477343dcf01028/estimate_sigma".
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.046524s.
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/get_wm".
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038719s.
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/dwimodel".
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.440458s.
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0fa3251e4610ac70664fd776af2b9f298b429a10/estimate_sigma".
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043692s.
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/get_wm".
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.040472s.
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/dwimodel".
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:30 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.857035s.
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3aed28124a56ae1d1b21574d3242208a1f285401/estimate_sigma".
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.044719s.
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/get_wm".
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039598s.
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/dwimodel".
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.83923s.
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/041b552f1fc03cddd14af2e0c110d1a8065e3076/estimate_sigma".
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.041548s.
2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/get_wm".
2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038273s.
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/cc_mask".
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.558077s.
2025-10-09 22:24:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_fa".
2025-10-09 22:24:47 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.498265s.
2025-10-09 22:24:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_md".
2025-10-09 22:24:49 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:51 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.954352s.
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/plot_heatmap".
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.46655s.
2025-10-09 22:24:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/cc_mask".
2025-10-09 22:24:55 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:55 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.591371s.
2025-10-09 22:24:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_fa".
2025-10-09 22:24:57 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:59 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.891007s.
2025-10-09 22:25:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_md".
2025-10-09 22:25:01 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:03 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.009094s.
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/plot_heatmap".
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:06 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.323506s.
2025-10-09 22:25:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/cc_mask".
2025-10-09 22:25:07 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:07 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.572175s.
2025-10-09 22:25:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_fa".
2025-10-09 22:25:09 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.739873s.
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_md".
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:13 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.238108s.
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/plot_heatmap".
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:16 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.415607s.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/cc_mask".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.572355s.
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_fa".
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.8587500000000001s.
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_md".
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.919065s.
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/plot_heatmap".
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.360254s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_fa".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.006794s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_md".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.006929s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_hm".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005992s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_fa".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.00545s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_md".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005401s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_hm".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005231s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_fa".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005477s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_md".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005174s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_hm".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005247s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_fa".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005137s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_md".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005178s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_hm".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005464s.
2025-10-09 22:25:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:25:29 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 10.005498s.
2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:49 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 10.068367s.
2025-10-09 22:25:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:25:51 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:01 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 10.010664s.
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7209940975b0a939a83d3c1b237ee993d3c2d8d0/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/7209940975b0a939a83d3c1b237ee993d3c2d8d0/Enhance".
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.723114s.
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/7209940975b0a939a83d3c1b237ee993d3c2d8d0/format_tpm_names".
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.014939s.
2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/7209940975b0a939a83d3c1b237ee993d3c2d8d0/Grad".
2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.310308s.
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/7209940975b0a939a83d3c1b237ee993d3c2d8d0/apply_mask".
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.331819s.
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/7209940975b0a939a83d3c1b237ee993d3c2d8d0/GradientThreshold".
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:37 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 16.694187s.
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/7209940975b0a939a83d3c1b237ee993d3c2d8d0/segmentation".
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:28:22 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 103.459025s.
2025-10-09 22:28:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ArtifactMask".
2025-10-09 22:28:23 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:28:30 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.805631s.
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotHeadmask".
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:34 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.651494s.
2025-10-09 22:28:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7209940975b0a939a83d3c1b237ee993d3c2d8d0/harmonize".
2025-10-09 22:28:35 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:28:36 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.197142s.
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotSegmentation".
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 4.016199s.
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7209940975b0a939a83d3c1b237ee993d3c2d8d0/provenance".
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.072756s.
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ComputeQI2".
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:28:56 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.16043s.
2025-10-09 22:28:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotAirmask".
2025-10-09 22:28:57 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:00 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.521787s.
2025-10-09 22:29:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/PlotArtmask".
2025-10-09 22:29:01 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.524197s.
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_headmask".
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.005369s.
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7209940975b0a939a83d3c1b237ee993d3c2d8d0/measures".
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:29:09 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1242)
2025-10-09 22:29:09 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1242)
2025-10-09 22:29:09 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1242)
2025-10-09 22:29:16 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.063811s.
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_segm".
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004985s.
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_noisefit".
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005172s.
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_airmask".
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004876s.
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7209940975b0a939a83d3c1b237ee993d3c2d8d0/ds_report_artmask".
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.005096s.
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7209940975b0a939a83d3c1b237ee993d3c2d8d0/datasink".
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:29:17 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000546s.
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/averages/mapflow/_averages0".
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.306022s.
2025-10-09 22:29:19 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/averages/mapflow/_averages1".
2025-10-09 22:29:19 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:19 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.31454s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/averages/mapflow/_averages0".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/averages/mapflow/_averages1".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:29:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b453533e3db0433dd3cd8bfa5a477343dcf01028/motion_correct".
2025-10-09 22:29:23 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:32:11 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 168.085684s.
2025-10-09 22:32:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b453533e3db0433dd3cd8bfa5a477343dcf01028/ComputeFD".
2025-10-09 22:32:13 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:32:13 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005468s.
2025-10-09 22:32:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b453533e3db0433dd3cd8bfa5a477343dcf01028/bvec_rot".
2025-10-09 22:32:15 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:32:15 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017324s.
2025-10-09 22:32:17 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/stddev/mapflow/_stddev0".
2025-10-09 22:32:17 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:17 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.428827s.
2025-10-09 22:32:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/stddev/mapflow/_stddev1".
2025-10-09 22:32:19 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:19 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.424898s.
2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/stddev/mapflow/_stddev0".
2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/stddev/mapflow/_stddev1".
2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:32:23 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/averages/mapflow/_averages0".
2025-10-09 22:32:23 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:23 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.303982s.
2025-10-09 22:32:25 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/averages/mapflow/_averages1".
2025-10-09 22:32:25 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:25 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.30088s.
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/averages/mapflow/_averages0".
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/averages/mapflow/_averages1".
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:32:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0fa3251e4610ac70664fd776af2b9f298b429a10/motion_correct".
2025-10-09 22:32:29 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:35:22 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 172.883905s.
2025-10-09 22:35:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0fa3251e4610ac70664fd776af2b9f298b429a10/ComputeFD".
2025-10-09 22:35:23 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:35:23 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001173s.
2025-10-09 22:35:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0fa3251e4610ac70664fd776af2b9f298b429a10/bvec_rot".
2025-10-09 22:35:25 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:35:25 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017918s.
2025-10-09 22:35:27 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/stddev/mapflow/_stddev0".
2025-10-09 22:35:27 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:35:27 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.464662s.
2025-10-09 22:35:29 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/stddev/mapflow/_stddev1".
2025-10-09 22:35:29 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:35:29 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.43065s.
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/stddev/mapflow/_stddev0".
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/stddev/mapflow/_stddev1".
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/averages/mapflow/_averages0".
2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.388411s.
2025-10-09 22:35:35 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/averages/mapflow/_averages1".
2025-10-09 22:35:35 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:35:35 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.377293s.
2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/averages/mapflow/_averages0".
2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/averages/mapflow/_averages1".
2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:35:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3aed28124a56ae1d1b21574d3242208a1f285401/motion_correct".
2025-10-09 22:35:39 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:39:37 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 238.309034s.
2025-10-09 22:39:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3aed28124a56ae1d1b21574d3242208a1f285401/ComputeFD".
2025-10-09 22:39:39 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:39:39 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005262s.
2025-10-09 22:39:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3aed28124a56ae1d1b21574d3242208a1f285401/bvec_rot".
2025-10-09 22:39:41 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:39:41 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020776s.
2025-10-09 22:39:43 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/stddev/mapflow/_stddev0".
2025-10-09 22:39:43 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:39:44 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.574421s.
2025-10-09 22:39:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/stddev/mapflow/_stddev1".
2025-10-09 22:39:45 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:39:46 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.557014s.
2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/stddev/mapflow/_stddev0".
2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/stddev/mapflow/_stddev1".
2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:39:49 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/averages/mapflow/_averages0".
2025-10-09 22:39:49 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:39:50 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.384487s.
2025-10-09 22:39:51 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/averages/mapflow/_averages1".
2025-10-09 22:39:51 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:39:52 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.384046s.
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/averages/mapflow/_averages0".
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/averages/mapflow/_averages1".
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:39:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/041b552f1fc03cddd14af2e0c110d1a8065e3076/motion_correct".
2025-10-09 22:39:55 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 241.660659s.
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/041b552f1fc03cddd14af2e0c110d1a8065e3076/ComputeFD".
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006432s.
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/041b552f1fc03cddd14af2e0c110d1a8065e3076/bvec_rot".
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.02046s.
2025-10-09 22:44:01 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/stddev/mapflow/_stddev0".
2025-10-09 22:44:01 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.58859s.
2025-10-09 22:44:03 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/stddev/mapflow/_stddev1".
2025-10-09 22:44:03 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.584985s.
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/stddev/mapflow/_stddev0".
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/stddev/mapflow/_stddev1".
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:44:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.476495s.
2025-10-09 22:44:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:44:09 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.5740669999999999s.
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:44:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:13 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:14 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.144993s.
2025-10-09 22:44:15 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:15 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.52409s.
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:44:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b453533e3db0433dd3cd8bfa5a477343dcf01028/measures".
2025-10-09 22:44:21 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.94698s.
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b453533e3db0433dd3cd8bfa5a477343dcf01028/datasink".
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000503s.
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:27 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/stddev/mapflow/_stddev0/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/averages/mapflow/_averages0/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:27 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:44 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.864338s.
2025-10-09 22:44:45 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:45 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:45 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/stddev/mapflow/_stddev1/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b453533e3db0433dd3cd8bfa5a477343dcf01028/averages/mapflow/_averages1/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:45 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.34626s.
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.459473s.
2025-10-09 22:45:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:09 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.582592s.
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.134835s.
2025-10-09 22:45:15 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:15 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.468803s.
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0fa3251e4610ac70664fd776af2b9f298b429a10/measures".
2025-10-09 22:45:21 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:25 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.150769s.
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0fa3251e4610ac70664fd776af2b9f298b429a10/datasink".
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000644s.
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:27 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/stddev/mapflow/_stddev0/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/averages/mapflow/_averages0/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:27 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.767663s.
2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:45 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/stddev/mapflow/_stddev1/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/0fa3251e4610ac70664fd776af2b9f298b429a10/averages/mapflow/_averages1/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:45 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 16.934521s.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:07 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.476171s.
2025-10-09 22:46:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:07 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.677216s.
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.455467s.
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:18 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.907183s.
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3aed28124a56ae1d1b21574d3242208a1f285401/measures".
2025-10-09 22:46:21 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:27 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.394899s.
2025-10-09 22:46:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3aed28124a56ae1d1b21574d3242208a1f285401/datasink".
2025-10-09 22:46:27 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:27 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000484s.
2025-10-09 22:46:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:27 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:27 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/stddev/mapflow/_stddev0/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/averages/mapflow/_averages0/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:27 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.102562s.
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:47 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/stddev/mapflow/_stddev1/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/3aed28124a56ae1d1b21574d3242208a1f285401/averages/mapflow/_averages1/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:47 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.038832s.
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.431734s.
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.4852750000000001s.
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.461894s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:22 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.654175s.
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/041b552f1fc03cddd14af2e0c110d1a8065e3076/measures".
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.499966s.
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/041b552f1fc03cddd14af2e0c110d1a8065e3076/datasink".
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000486s.
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:31 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/stddev/mapflow/_stddev0/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/averages/mapflow/_averages0/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:31 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.619634s.
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:49 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/stddev/mapflow/_stddev1/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/041b552f1fc03cddd14af2e0c110d1a8065e3076/averages/mapflow/_averages1/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:49 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.967093s.
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004952s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004921s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005037s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005113s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005053s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005323s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005387s.
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005358s.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005769s.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005354s.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004915s.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005037s.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004994s.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004992s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.007748s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004437s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004793s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b453533e3db0433dd3cd8bfa5a477343dcf01028/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00456s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004616s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004401s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004916s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0fa3251e4610ac70664fd776af2b9f298b429a10/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004739s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005679s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004774s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004718s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3aed28124a56ae1d1b21574d3242208a1f285401/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004436s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00519s.
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005196s.
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00516s.
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005043s.
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004852s.
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/041b552f1fc03cddd14af2e0c110d1a8065e3076/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004539s.
2025-10-09 22:48:17 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:48:19 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:48:19 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 12s per subject.
2025-10-09 22:48:19 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 51min 04s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/anat/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs089 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_3950077/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215714_54bf6884-1fe8-430b-9ab7-e3599011aaed.toml (file)
add(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_info.json (file)
add(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_stderr (file)
add(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_stdout (file)
add(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_usage.json (file)
add(ok): logs/mriqc-20251009-215714_54bf6884-1fe8-430b-9ab7-e3599011aaed.log (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-fa_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-md_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-fa_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-md_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-fa_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_desc-md_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-fa_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_desc-md_dwi.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs089/ses-s1Bx1/anat/sub-cIVs089_ses-s1Bx1_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi.json (file)
add(ok): sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi.json (file)
add(ok): sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.json (file)
add(ok): sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi.json (file)
add(ok): sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi.html (file)
add(ok): sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi.html (file)
add(ok): sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.html (file)
add(ok): sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi.html (file)
add(ok): sub-cIVs089_ses-s1Bx1_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215714_54bf6884-1fe8-430b-9ab7-e3599011aaed.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs089_2025.10.09T23.57.13-4074158_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215714_54bf6884-1fe8-430b-9ab7-e3599011aaed.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs089/figures/sub-cIVs089_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs089/ses-s1Bx1/dwi/sub-cIVs089_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.json (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs089_ses-s1Bx1_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000909 seconds
flock: executing git
SUCCESS
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