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ds003416-mriqc/logs/sub-cIVs088_10066402.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_3128607/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3128607/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3128607/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3128607/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:58:20 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:58:20 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:58:20 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:58:20 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:58:20 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:58:20 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215819_0dccad47-c96a-4124-a740-0ff844a89a18.toml.
2025-10-09 21:58:24 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:58:25 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:58:25 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:58:26 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:58:29 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:58:33 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/0a31a536e6bfffba7a408dff283df67371228595/conform".
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.342947s.
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/load_bmat".
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.152842s.
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/sanitize".
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018599s.
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/6100bc60c89f28674f57d8a94dd77d3b1f490dee/provenance".
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.01698s.
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/load_bmat".
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020417s.
2025-10-09 21:58:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/sanitize".
2025-10-09 21:58:41 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:41 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018152s.
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a9261950fdee4ec357f250f8a0556cd011c62087/provenance".
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.016921s.
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/load_bmat".
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021316s.
2025-10-09 21:58:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/sanitize".
2025-10-09 21:58:45 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:45 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.035369s.
2025-10-09 21:58:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/44da66c9ac249c3459723309291e53c2b13176a2/provenance".
2025-10-09 21:58:47 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:47 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021541s.
2025-10-09 21:58:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/load_bmat".
2025-10-09 21:58:47 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:47 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021001s.
2025-10-09 21:58:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/sanitize".
2025-10-09 21:58:49 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:49 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018254s.
2025-10-09 21:58:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1e37f4a7653a2707a784c94c906f974eb9056a5a/provenance".
2025-10-09 21:58:51 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:51 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021379s.
2025-10-09 21:58:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0a31a536e6bfffba7a408dff283df67371228595/pre_clip".
2025-10-09 21:58:51 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.6311029999999995s.
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/0a31a536e6bfffba7a408dff283df67371228595/RotationMask".
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.548036s.
2025-10-09 21:59:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotMosaicNoise".
2025-10-09 21:59:01 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:59:05 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.966466s.
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/shells".
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00063s.
2025-10-09 21:59:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/piesno".
2025-10-09 21:59:09 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.619913s.
2025-10-09 21:59:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/shells".
2025-10-09 21:59:11 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:11 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000698s.
2025-10-09 21:59:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/piesno".
2025-10-09 21:59:13 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.643715s.
2025-10-09 21:59:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/shells".
2025-10-09 21:59:15 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:15 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000636s.
2025-10-09 21:59:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/piesno".
2025-10-09 21:59:17 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.862313s.
2025-10-09 21:59:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/shells".
2025-10-09 21:59:19 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:19 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000618s.
2025-10-09 21:59:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/piesno".
2025-10-09 21:59:21 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.877761s.
2025-10-09 21:59:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0a31a536e6bfffba7a408dff283df67371228595/pre_n4".
2025-10-09 21:59:23 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:13 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 110.126047s.
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_background".
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007115s.
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/dwi_ref".
2025-10-09 22:01:15 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:16 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.41031s.
2025-10-09 22:01:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/get_lowb".
2025-10-09 22:01:17 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:17 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.241067s.
2025-10-09 22:01:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/dwi_ref".
2025-10-09 22:01:19 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:19 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.393707s.
2025-10-09 22:01:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/get_lowb".
2025-10-09 22:01:21 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:21 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.240626s.
2025-10-09 22:01:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/dwi_ref".
2025-10-09 22:01:23 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:24 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.503697s.
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/get_lowb".
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.310406s.
2025-10-09 22:01:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/dwi_ref".
2025-10-09 22:01:27 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.487612s.
2025-10-09 22:01:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/get_lowb".
2025-10-09 22:01:29 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:29 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.309914s.
2025-10-09 22:01:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0a31a536e6bfffba7a408dff283df67371228595/synthstrip".
2025-10-09 22:01:31 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:02:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 58.571895s.
2025-10-09 22:02:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/pre_clip".
2025-10-09 22:02:31 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:32 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.464237s.
2025-10-09 22:02:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/SharpenEPI".
2025-10-09 22:02:33 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:39 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.202289s.
2025-10-09 22:02:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/hmc_b0".
2025-10-09 22:02:41 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 13.614627s.
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/pre_clip".
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.464001s.
2025-10-09 22:02:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/SharpenEPI".
2025-10-09 22:02:57 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:03 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.221292s.
2025-10-09 22:03:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/hmc_b0".
2025-10-09 22:03:05 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:19 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 13.492248s.
2025-10-09 22:03:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/pre_clip".
2025-10-09 22:03:19 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:20 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.464335s.
2025-10-09 22:03:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/SharpenEPI".
2025-10-09 22:03:21 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:27 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.211667s.
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/hmc_b0".
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:47 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 17.46316s.
2025-10-09 22:03:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/pre_clip".
2025-10-09 22:03:47 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:48 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.458385s.
2025-10-09 22:03:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/SharpenEPI".
2025-10-09 22:03:49 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:55 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.206231s.
2025-10-09 22:03:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/hmc_b0".
2025-10-09 22:03:57 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 17.779773s.
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0a31a536e6bfffba7a408dff283df67371228595/post_n4".
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:37 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 21.426975s.
2025-10-09 22:04:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0a31a536e6bfffba7a408dff283df67371228595/smoothness".
2025-10-09 22:04:37 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:04:40 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.360817s.
2025-10-09 22:04:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotMosaicZoomed".
2025-10-09 22:04:41 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.8648379999999998s.
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotBrainmask".
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.443434s.
2025-10-09 22:04:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/pre_n4".
2025-10-09 22:04:49 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:55 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.220396s.
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/pre_n4".
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:03 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.217189s.
2025-10-09 22:05:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/pre_n4".
2025-10-09 22:05:05 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:11 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.212561s.
2025-10-09 22:05:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/pre_n4".
2025-10-09 22:05:13 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.218241s.
2025-10-09 22:05:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/0a31a536e6bfffba7a408dff283df67371228595/final_masked".
2025-10-09 22:05:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:05:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.251247s.
2025-10-09 22:05:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization".
2025-10-09 22:05:23 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:05:24 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:06:11 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:06:11 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:06:23 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:06:24 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:06:24 | INFO | niworkflows | Generating visual report
2025-10-09 22:06:35 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 72.010548s.
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_zoomed".
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004024s.
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_bmask".
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003912s.
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/synthstrip".
2025-10-09 22:06:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:07:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.589359s.
2025-10-09 22:07:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/synthstrip".
2025-10-09 22:07:17 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:07:57 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.521432s.
2025-10-09 22:07:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/synthstrip".
2025-10-09 22:07:57 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:08:37 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.548447s.
2025-10-09 22:08:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/synthstrip".
2025-10-09 22:08:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.578611s.
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_norm".
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003873s.
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/post_n4".
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:09:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.9118789999999999s.
2025-10-09 22:09:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/sp_mask".
2025-10-09 22:09:21 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:09:22 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.43837s.
2025-10-09 22:09:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/drift".
2025-10-09 22:09:23 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:09:23 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9942, 0.9912, 1.0006, 0.9811, 0.9893, 0.9882.
2025-10-09 22:09:24 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.114006s.
2025-10-09 22:09:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/EPI2MNI".
2025-10-09 22:09:25 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:09:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:09:46 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:09:46 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:10:45 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:10:45 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:10:45 | INFO | niworkflows | Generating visual report
2025-10-09 22:10:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.722927s.
2025-10-09 22:10:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/post_n4".
2025-10-09 22:10:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:10:59 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.914729s.
2025-10-09 22:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/sp_mask".
2025-10-09 22:11:01 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:11:02 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.43771s.
2025-10-09 22:11:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/drift".
2025-10-09 22:11:03 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:11:03 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0229, 1.0257, 1.0312, 1.0281, 1.0097, 0.9942.
2025-10-09 22:11:04 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.115794s.
2025-10-09 22:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/EPI2MNI".
2025-10-09 22:11:05 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:11:05 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:11:28 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:11:28 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:12:26 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:12:26 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:12:26 | INFO | niworkflows | Generating visual report
2025-10-09 22:12:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 92.485499s.
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/post_n4".
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:12:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.917842s.
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/sp_mask".
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:12:44 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.623101s.
2025-10-09 22:12:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/drift".
2025-10-09 22:12:45 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:12:45 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9985, 0.9947, 0.9993, 0.9978, 0.9913, 0.9896, 0.9934, 0.9882.
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.429487s.
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/EPI2MNI".
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:12:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:13:10 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/EPI2MNI/stderr.nipype-init).
2025-10-09 22:13:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:13:10 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:14:05 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:14:05 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:14:05 | INFO | niworkflows | Generating visual report
2025-10-09 22:14:17 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.29168s.
2025-10-09 22:14:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/post_n4".
2025-10-09 22:14:17 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:14:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.8981029999999999s.
2025-10-09 22:14:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/sp_mask".
2025-10-09 22:14:21 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:14:22 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.622439s.
2025-10-09 22:14:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/drift".
2025-10-09 22:14:23 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:14:23 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9912, 0.9922, 0.9981, 1.0025, 1.0059, 0.9976, 0.995, 0.9886.
2025-10-09 22:14:25 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.437965s.
2025-10-09 22:14:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/EPI2MNI".
2025-10-09 22:14:25 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:14:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:14:46 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/EPI2MNI/stderr.nipype-init).
2025-10-09 22:14:46 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:14:46 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/SharpenEPI/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:15:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:15:43 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:15:43 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:55 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.228731s.
2025-10-09 22:15:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/final_masked".
2025-10-09 22:15:55 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:15:55 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026395s.
2025-10-09 22:15:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/dwidenoise".
2025-10-09 22:15:57 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:16:13 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 15.596071s.
2025-10-09 22:16:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ResampleSegmentation".
2025-10-09 22:16:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:16:16 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.854778s.
2025-10-09 22:16:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a9261950fdee4ec357f250f8a0556cd011c62087/final_masked".
2025-10-09 22:16:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:16:17 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02591s.
2025-10-09 22:16:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/dwidenoise".
2025-10-09 22:16:19 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:16:35 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 15.183808s.
2025-10-09 22:16:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a9261950fdee4ec357f250f8a0556cd011c62087/ResampleSegmentation".
2025-10-09 22:16:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:16:38 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.794197s.
2025-10-09 22:16:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/44da66c9ac249c3459723309291e53c2b13176a2/final_masked".
2025-10-09 22:16:39 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:16:39 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.0263s.
2025-10-09 22:16:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/dwidenoise".
2025-10-09 22:16:41 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 27.211021s.
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/44da66c9ac249c3459723309291e53c2b13176a2/ResampleSegmentation".
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:17:12 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.878235s.
2025-10-09 22:17:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/final_masked".
2025-10-09 22:17:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:17:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025672s.
2025-10-09 22:17:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/dwidenoise".
2025-10-09 22:17:15 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 26.89008s.
2025-10-09 22:17:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1e37f4a7653a2707a784c94c906f974eb9056a5a/ResampleSegmentation".
2025-10-09 22:17:43 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:17:46 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.804315s.
2025-10-09 22:17:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/dwimodel".
2025-10-09 22:17:47 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.758797s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/6100bc60c89f28674f57d8a94dd77d3b1f490dee/estimate_sigma".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.029312s.
2025-10-09 22:17:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/get_wm".
2025-10-09 22:17:53 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:53 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.02885s.
2025-10-09 22:17:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/dwimodel".
2025-10-09 22:17:55 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:17:58 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.728681s.
2025-10-09 22:17:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a9261950fdee4ec357f250f8a0556cd011c62087/estimate_sigma".
2025-10-09 22:17:59 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:59 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.028542s.
2025-10-09 22:18:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/get_wm".
2025-10-09 22:18:01 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:01 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.028451s.
2025-10-09 22:18:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/dwimodel".
2025-10-09 22:18:03 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.08718s.
2025-10-09 22:18:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/44da66c9ac249c3459723309291e53c2b13176a2/estimate_sigma".
2025-10-09 22:18:07 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:07 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.029343s.
2025-10-09 22:18:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/get_wm".
2025-10-09 22:18:09 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:09 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.028527s.
2025-10-09 22:18:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/dwimodel".
2025-10-09 22:18:11 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.063597s.
2025-10-09 22:18:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1e37f4a7653a2707a784c94c906f974eb9056a5a/estimate_sigma".
2025-10-09 22:18:15 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:15 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.029541s.
2025-10-09 22:18:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/get_wm".
2025-10-09 22:18:17 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:17 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.028461s.
2025-10-09 22:18:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/cc_mask".
2025-10-09 22:18:19 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:18:20 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.393831s.
2025-10-09 22:18:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_fa".
2025-10-09 22:18:21 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:23 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.115042s.
2025-10-09 22:18:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_md".
2025-10-09 22:18:23 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:25 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.32067s.
2025-10-09 22:18:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/plot_heatmap".
2025-10-09 22:18:25 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:18:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.80047s.
2025-10-09 22:18:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/cc_mask".
2025-10-09 22:18:27 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:18:28 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.37912s.
2025-10-09 22:18:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_fa".
2025-10-09 22:18:29 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:31 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.206419s.
2025-10-09 22:18:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_md".
2025-10-09 22:18:31 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:33 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.338168s.
2025-10-09 22:18:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/plot_heatmap".
2025-10-09 22:18:33 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:18:34 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.789022s.
2025-10-09 22:18:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/cc_mask".
2025-10-09 22:18:35 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:18:36 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.398307s.
2025-10-09 22:18:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_fa".
2025-10-09 22:18:37 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:39 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.196189s.
2025-10-09 22:18:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_md".
2025-10-09 22:18:39 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:41 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.315093s.
2025-10-09 22:18:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/plot_heatmap".
2025-10-09 22:18:41 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:18:42 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.839059s.
2025-10-09 22:18:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/cc_mask".
2025-10-09 22:18:43 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:18:44 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.375855s.
2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_fa".
2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:47 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.218435s.
2025-10-09 22:18:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_md".
2025-10-09 22:18:47 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:18:49 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.31596s.
2025-10-09 22:18:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/plot_heatmap".
2025-10-09 22:18:49 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:18:50 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.838119s.
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_fa".
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.003943s.
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_md".
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003954s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_hm".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003896s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_fa".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.003955s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_md".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003832s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_hm".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004008s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_fa".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004014s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_md".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.00384s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_hm".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003806s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_fa".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005574s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_md".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003829s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_hm".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003811s.
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:18:52 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 6.789488s.
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:19:06 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 6.864267s.
2025-10-09 22:19:07 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:19:07 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:19:14 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 6.849121s.
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/0a31a536e6bfffba7a408dff283df67371228595/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:19:15 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:19:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0a31a536e6bfffba7a408dff283df67371228595/Enhance".
2025-10-09 22:19:17 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:19:18 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.493623s.
2025-10-09 22:19:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/0a31a536e6bfffba7a408dff283df67371228595/format_tpm_names".
2025-10-09 22:19:19 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:19:21 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.389944s.
2025-10-09 22:19:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0a31a536e6bfffba7a408dff283df67371228595/Grad".
2025-10-09 22:19:21 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:19:23 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 2.032852s.
2025-10-09 22:19:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0a31a536e6bfffba7a408dff283df67371228595/apply_mask".
2025-10-09 22:19:25 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:19:26 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.230342s.
2025-10-09 22:19:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/0a31a536e6bfffba7a408dff283df67371228595/GradientThreshold".
2025-10-09 22:19:27 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:19:38 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 10.794048s.
2025-10-09 22:19:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/0a31a536e6bfffba7a408dff283df67371228595/segmentation".
2025-10-09 22:19:39 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:20:47 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 67.991017s.
2025-10-09 22:20:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/0a31a536e6bfffba7a408dff283df67371228595/ArtifactMask".
2025-10-09 22:20:49 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:20:52 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 2.333732s.
2025-10-09 22:20:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotHeadmask".
2025-10-09 22:20:53 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:20:55 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.054702s.
2025-10-09 22:20:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0a31a536e6bfffba7a408dff283df67371228595/harmonize".
2025-10-09 22:20:57 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:20:58 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.630269s.
2025-10-09 22:20:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotSegmentation".
2025-10-09 22:20:59 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:21:02 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.311664s.
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0a31a536e6bfffba7a408dff283df67371228595/provenance".
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.050326s.
2025-10-09 22:21:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0a31a536e6bfffba7a408dff283df67371228595/ComputeQI2".
2025-10-09 22:21:04 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 7.511104s.
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotAirmask".
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:21:14 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.073418s.
2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/PlotArtmask".
2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:21:18 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.068149s.
2025-10-09 22:21:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_headmask".
2025-10-09 22:21:19 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:21:19 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.007827s.
2025-10-09 22:21:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0a31a536e6bfffba7a408dff283df67371228595/measures".
2025-10-09 22:21:20 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:21:22 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.4756)
2025-10-09 22:21:22 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.4756)
2025-10-09 22:21:22 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.4756)
2025-10-09 22:21:25 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.7465s.
2025-10-09 22:21:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_segm".
2025-10-09 22:21:25 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:21:25 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003757s.
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_noisefit".
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003689s.
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_airmask".
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003649s.
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/0a31a536e6bfffba7a408dff283df67371228595/ds_report_artmask".
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003928s.
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/0a31a536e6bfffba7a408dff283df67371228595/datasink".
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000535s.
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/averages/mapflow/_averages0".
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.215601s.
2025-10-09 22:21:27 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/averages/mapflow/_averages1".
2025-10-09 22:21:27 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:21:28 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.215125s.
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/averages/mapflow/_averages0".
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/averages/mapflow/_averages1".
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:21:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/motion_correct".
2025-10-09 22:21:31 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:23:31 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 119.706077s.
2025-10-09 22:23:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ComputeFD".
2025-10-09 22:23:32 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:23:32 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001009s.
2025-10-09 22:23:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/bvec_rot".
2025-10-09 22:23:33 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:23:33 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.012833s.
2025-10-09 22:23:35 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/stddev/mapflow/_stddev0".
2025-10-09 22:23:35 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:23:36 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.314416s.
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/stddev/mapflow/_stddev1".
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:23:38 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.31536s.
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/stddev/mapflow/_stddev0".
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/stddev/mapflow/_stddev1".
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:23:41 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/averages/mapflow/_averages0".
2025-10-09 22:23:41 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:23:42 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.214849s.
2025-10-09 22:23:43 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/averages/mapflow/_averages1".
2025-10-09 22:23:43 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:23:44 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.215229s.
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/averages/mapflow/_averages0".
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/averages/mapflow/_averages1".
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a9261950fdee4ec357f250f8a0556cd011c62087/motion_correct".
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 126.51753s.
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a9261950fdee4ec357f250f8a0556cd011c62087/ComputeFD".
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00094s.
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a9261950fdee4ec357f250f8a0556cd011c62087/bvec_rot".
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.012647s.
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/stddev/mapflow/_stddev0".
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.292651s.
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/stddev/mapflow/_stddev1".
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.293207s.
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/stddev/mapflow/_stddev0".
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/stddev/mapflow/_stddev1".
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/averages/mapflow/_averages0".
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.271362s.
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/averages/mapflow/_averages1".
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.271662s.
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/averages/mapflow/_averages0".
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/averages/mapflow/_averages1".
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/44da66c9ac249c3459723309291e53c2b13176a2/motion_correct".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:28:55 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 163.444379s.
2025-10-09 22:28:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/44da66c9ac249c3459723309291e53c2b13176a2/ComputeFD".
2025-10-09 22:28:56 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:28:56 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001056s.
2025-10-09 22:28:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/44da66c9ac249c3459723309291e53c2b13176a2/bvec_rot".
2025-10-09 22:28:58 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:28:58 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.015171s.
2025-10-09 22:29:00 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/stddev/mapflow/_stddev0".
2025-10-09 22:29:00 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:00 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.399601s.
2025-10-09 22:29:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/stddev/mapflow/_stddev1".
2025-10-09 22:29:02 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:02 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.401312s.
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/stddev/mapflow/_stddev0".
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/stddev/mapflow/_stddev1".
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:29:06 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/averages/mapflow/_averages0".
2025-10-09 22:29:06 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:06 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.292508s.
2025-10-09 22:29:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/averages/mapflow/_averages1".
2025-10-09 22:29:08 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:08 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.270519s.
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/averages/mapflow/_averages0".
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/averages/mapflow/_averages1".
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:29:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/1e37f4a7653a2707a784c94c906f974eb9056a5a/motion_correct".
2025-10-09 22:29:12 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:32:14 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 182.434822s.
2025-10-09 22:32:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/1e37f4a7653a2707a784c94c906f974eb9056a5a/ComputeFD".
2025-10-09 22:32:16 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:32:16 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001044s.
2025-10-09 22:32:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/1e37f4a7653a2707a784c94c906f974eb9056a5a/bvec_rot".
2025-10-09 22:32:18 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:32:18 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.014794s.
2025-10-09 22:32:20 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/stddev/mapflow/_stddev0".
2025-10-09 22:32:20 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:20 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.379629s.
2025-10-09 22:32:22 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/stddev/mapflow/_stddev1".
2025-10-09 22:32:22 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:22 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.378267s.
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/stddev/mapflow/_stddev0".
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/stddev/mapflow/_stddev1".
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:32:26 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:32:26 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.075864s.
2025-10-09 22:32:28 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:32:28 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:32:29 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.13547s.
2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:32:32 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:32:32 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:32:32 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 0.788781s.
2025-10-09 22:32:34 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:32:34 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 2.520632s.
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:32:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/6100bc60c89f28674f57d8a94dd77d3b1f490dee/measures".
2025-10-09 22:32:40 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 2.46624s.
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/6100bc60c89f28674f57d8a94dd77d3b1f490dee/datasink".
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00045s.
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:32:44 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/stddev/mapflow/_stddev0/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/averages/mapflow/_averages0/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:32:44 | INFO | nipype.interface | Generating visual report
2025-10-09 22:32:54 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 10.423287s.
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:32:56 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/stddev/mapflow/_stddev1/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/6100bc60c89f28674f57d8a94dd77d3b1f490dee/averages/mapflow/_averages1/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:32:56 | INFO | nipype.interface | Generating visual report
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.822707s.
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:33:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.082646s.
2025-10-09 22:33:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:33:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:33:13 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.126609s.
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:33:14 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:33:16 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:33:16 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:33:17 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 0.820213s.
2025-10-09 22:33:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:33:18 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:33:20 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 2.492847s.
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a9261950fdee4ec357f250f8a0556cd011c62087/measures".
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 2.430341s.
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a9261950fdee4ec357f250f8a0556cd011c62087/datasink".
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000359s.
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:33:28 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/stddev/mapflow/_stddev0/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/averages/mapflow/_averages0/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:33:28 | INFO | nipype.interface | Generating visual report
2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 11.741066s.
2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:33:40 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/stddev/mapflow/_stddev1/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/a9261950fdee4ec357f250f8a0556cd011c62087/averages/mapflow/_averages1/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:33:40 | INFO | nipype.interface | Generating visual report
2025-10-09 22:33:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.91365s.
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:33:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.101964s.
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.14057s.
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:34:03 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.063142s.
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:34:07 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.501689s.
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/44da66c9ac249c3459723309291e53c2b13176a2/measures".
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:34:13 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.529329s.
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/44da66c9ac249c3459723309291e53c2b13176a2/datasink".
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000367s.
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:34:14 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/stddev/mapflow/_stddev0/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/averages/mapflow/_averages0/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:34:14 | INFO | nipype.interface | Generating visual report
2025-10-09 22:34:26 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 11.987109s.
2025-10-09 22:34:28 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:34:28 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:34:28 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/stddev/mapflow/_stddev1/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/44da66c9ac249c3459723309291e53c2b13176a2/averages/mapflow/_averages1/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:34:28 | INFO | nipype.interface | Generating visual report
2025-10-09 22:34:40 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.97227s.
2025-10-09 22:34:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:34:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:34:42 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:34:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:34:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:34:42 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:34:44 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:34:44 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:34:45 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.105427s.
2025-10-09 22:34:46 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:34:46 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.152232s.
2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:34:50 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:34:50 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:34:51 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.097102s.
2025-10-09 22:34:52 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:34:52 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:34:55 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.502782s.
2025-10-09 22:34:56 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:34:56 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:34:56 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:34:56 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:34:56 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:34:56 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:34:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1e37f4a7653a2707a784c94c906f974eb9056a5a/measures".
2025-10-09 22:34:58 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:35:01 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.561778s.
2025-10-09 22:35:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1e37f4a7653a2707a784c94c906f974eb9056a5a/datasink".
2025-10-09 22:35:02 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:35:02 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000378s.
2025-10-09 22:35:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:35:02 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:35:02 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/stddev/mapflow/_stddev0/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/averages/mapflow/_averages0/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:35:02 | INFO | nipype.interface | Generating visual report
2025-10-09 22:35:13 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 10.752757s.
2025-10-09 22:35:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:35:14 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:35:14 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/stddev/mapflow/_stddev1/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/1e37f4a7653a2707a784c94c906f974eb9056a5a/averages/mapflow/_averages1/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:35:14 | INFO | nipype.interface | Generating visual report
2025-10-09 22:35:26 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.922148s.
2025-10-09 22:35:28 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:35:28 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:35:28 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:35:28 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:35:28 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:35:28 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00397s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004002s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003942s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003947s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00404s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004007s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004075s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004111s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004192s.
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004201s.
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004162s.
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003954s.
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003959s.
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003956s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003691s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003614s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003718s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/6100bc60c89f28674f57d8a94dd77d3b1f490dee/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003554s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003765s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003538s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003714s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a9261950fdee4ec357f250f8a0556cd011c62087/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003582s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003768s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003718s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003764s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/44da66c9ac249c3459723309291e53c2b13176a2/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003592s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003876s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003652s.
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005998s.
2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003994s.
2025-10-09 22:35:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:35:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00386s.
2025-10-09 22:35:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1e37f4a7653a2707a784c94c906f974eb9056a5a/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:35:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:35:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003684s.
2025-10-09 22:35:36 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:35:37 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:35:37 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 07min 27s per subject.
2025-10-09 22:35:37 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 37min 17s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/anat/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-106_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-209_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs088 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_3128607/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215819_0dccad47-c96a-4124-a740-0ff844a89a18.toml (file)
add(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_info.json (file)
add(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_stderr (file)
add(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_stdout (file)
add(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_usage.json (file)
add(ok): logs/mriqc-20251009-215819_0dccad47-c96a-4124-a740-0ff844a89a18.log (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-fa_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-md_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-fa_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-md_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-fa_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_desc-md_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-fa_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_desc-md_dwi.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs088/ses-s1Bx1/anat/sub-cIVs088_ses-s1Bx1_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi.json (file)
add(ok): sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi.json (file)
add(ok): sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi.json (file)
add(ok): sub-cIVs088/ses-s1Bx1/dwi/sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi.json (file)
add(ok): sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_dwi.html (file)
add(ok): sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_dwi.html (file)
add(ok): sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-105_dwi.html (file)
add(ok): sub-cIVs088_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-208_dwi.html (file)
add(ok): sub-cIVs088_ses-s1Bx1_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215819_0dccad47-c96a-4124-a740-0ff844a89a18.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs088_2025.10.09T23.58.18-3139641_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215819_0dccad47-c96a-4124-a740-0ff844a89a18.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-107_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs088/figures/sub-cIVs088_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-210_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs088_ses-s1Bx1_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000808 seconds
flock: executing git
SUCCESS
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