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ds003416-mriqc/logs/sub-cIVs086_10066438.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_470396/ds (dataset)
install(ok): /var/lib/condor/execute/dir_470396/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_470396/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_470396/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:57:18 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:57:18 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:18 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:57:19 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:57:19 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:19 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215716_076308d4-440f-4536-adcd-e5422b367098.toml.
2025-10-09 21:57:23 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:57:25 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:57:25 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:57:26 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:57:30 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:57:35 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:57:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/864b668dd04594af2b8c1f4be5ca4649277018bc/conform".
2025-10-09 21:57:35 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:57:36 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.747793s.
2025-10-09 21:57:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/load_bmat".
2025-10-09 21:57:37 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:37 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.184481s.
2025-10-09 21:57:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/sanitize".
2025-10-09 21:57:39 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:40 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.823882s.
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/provenance".
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.019563s.
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/load_bmat".
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023717s.
2025-10-09 21:57:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/sanitize".
2025-10-09 21:57:43 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:44 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.833448s.
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/provenance".
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.02013s.
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/load_bmat".
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.025215s.
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/sanitize".
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:48 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.083203s.
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3391dbd736552e6bef56e0eb345064d14b3723a4/provenance".
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.048285s.
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/load_bmat".
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023028s.
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/sanitize".
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.103694s.
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/provenance".
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.027553s.
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/pre_clip".
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:05 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.637406s.
2025-10-09 21:58:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/864b668dd04594af2b8c1f4be5ca4649277018bc/RotationMask".
2025-10-09 21:58:05 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.099298s.
2025-10-09 21:58:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotMosaicNoise".
2025-10-09 21:58:07 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.291665s.
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/shells".
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:13 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000727s.
2025-10-09 21:58:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/piesno".
2025-10-09 21:58:15 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.957729s.
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/shells".
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000662s.
2025-10-09 21:58:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/piesno".
2025-10-09 21:58:19 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.003656s.
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/shells".
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000705s.
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/piesno".
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 5.013719s.
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/shells".
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000692s.
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/piesno".
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.366222s.
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/pre_n4".
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:48 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 134.382584s.
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_background".
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009137s.
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/dwi_ref".
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:50 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.569526s.
2025-10-09 22:00:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/get_lowb".
2025-10-09 22:00:51 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:52 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.343348s.
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/dwi_ref".
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:54 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.591827s.
2025-10-09 22:00:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/get_lowb".
2025-10-09 22:00:55 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:56 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.34243s.
2025-10-09 22:00:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/dwi_ref".
2025-10-09 22:00:57 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:58 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.730652s.
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/get_lowb".
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:00 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.444116s.
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/dwi_ref".
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:02 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.699519s.
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/get_lowb".
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:04 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 1.168175s.
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/synthstrip".
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:02:50 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 105.134377s.
2025-10-09 22:02:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/pre_clip".
2025-10-09 22:02:51 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:52 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.726237s.
2025-10-09 22:02:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/SharpenEPI".
2025-10-09 22:02:53 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:01 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.090693s.
2025-10-09 22:03:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/hmc_b0".
2025-10-09 22:03:03 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:25 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.015676s.
2025-10-09 22:03:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/pre_clip".
2025-10-09 22:03:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.660612s.
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/SharpenEPI".
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:37 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.9689309999999995s.
2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/hmc_b0".
2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:01 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.911965s.
2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/pre_clip".
2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.6867s.
2025-10-09 22:04:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/SharpenEPI".
2025-10-09 22:04:05 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:13 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.051312s.
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/hmc_b0".
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:43 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.031502s.
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/pre_clip".
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:46 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.716242s.
2025-10-09 22:04:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/SharpenEPI".
2025-10-09 22:04:47 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:55 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.921309s.
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/hmc_b0".
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:25 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.468015s.
2025-10-09 22:05:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/post_n4".
2025-10-09 22:05:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:55 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 29.516127s.
2025-10-09 22:05:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/864b668dd04594af2b8c1f4be5ca4649277018bc/smoothness".
2025-10-09 22:05:55 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:06:01 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.767593s.
2025-10-09 22:06:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotMosaicZoomed".
2025-10-09 22:06:01 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:06:07 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.624497s.
2025-10-09 22:06:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotBrainmask".
2025-10-09 22:06:07 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:06:12 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.263813s.
2025-10-09 22:06:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/pre_n4".
2025-10-09 22:06:13 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:22 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.081234s.
2025-10-09 22:06:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/pre_n4".
2025-10-09 22:06:23 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:31 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.919595s.
2025-10-09 22:06:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/pre_n4".
2025-10-09 22:06:33 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:41 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.818023s.
2025-10-09 22:06:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/pre_n4".
2025-10-09 22:06:41 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.971924s.
2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/final_masked".
2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:06:52 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.32774s.
2025-10-09 22:06:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization".
2025-10-09 22:06:53 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:06:54 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:08:18 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:08:18 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:08:18 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:08:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:08:39 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:08:39 | INFO | niworkflows | Generating visual report
2025-10-09 22:09:00 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 126.784656s.
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_zoomed".
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005327s.
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_bmask".
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005248s.
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/synthstrip".
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 67.351148s.
2025-10-09 22:10:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/synthstrip".
2025-10-09 22:10:10 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:16 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 66.357076s.
2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/synthstrip".
2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:12:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 66.073503s.
2025-10-09 22:12:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/synthstrip".
2025-10-09 22:12:26 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:13:29 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 63.572016s.
2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_norm".
2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005116s.
2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/post_n4".
2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.604138s.
2025-10-09 22:13:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/sp_mask".
2025-10-09 22:13:34 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:13:34 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.663252s.
2025-10-09 22:13:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/drift".
2025-10-09 22:13:36 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:13:36 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9942, 0.9954, 0.9977, 1.0002, 0.9966, 1.0047.
2025-10-09 22:13:37 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.691783s.
2025-10-09 22:13:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/EPI2MNI".
2025-10-09 22:13:38 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:13:38 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:14:11 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/EPI2MNI/stderr.nipype-init).
2025-10-09 22:14:11 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:14:11 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:15:27 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:15:27 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:15:27 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:45 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 127.477703s.
2025-10-09 22:15:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/post_n4".
2025-10-09 22:15:46 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:15:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.598569s.
2025-10-09 22:15:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/sp_mask".
2025-10-09 22:15:50 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:15:50 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.652365s.
2025-10-09 22:15:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/drift".
2025-10-09 22:15:52 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:15:52 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0009, 0.9968, 1.0035, 1.0026, 0.999, 1.0016.
2025-10-09 22:15:53 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.685702s.
2025-10-09 22:15:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/EPI2MNI".
2025-10-09 22:15:54 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:15:54 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:16:27 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/EPI2MNI/stderr.nipype-init).
2025-10-09 22:16:27 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:16:27 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:17:41 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:17:41 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:17:41 | INFO | niworkflows | Generating visual report
2025-10-09 22:18:00 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.105186s.
2025-10-09 22:18:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/post_n4".
2025-10-09 22:18:02 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:18:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.748082s.
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/sp_mask".
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:18:07 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.963976s.
2025-10-09 22:18:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/drift".
2025-10-09 22:18:08 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:18:08 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.999, 0.9957, 1.0027, 0.9995, 1.0002, 0.9945, 0.9946, 0.9995.
2025-10-09 22:18:10 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.147719s.
2025-10-09 22:18:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/EPI2MNI".
2025-10-09 22:18:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:18:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:18:48 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/EPI2MNI/stderr.nipype-init).
2025-10-09 22:18:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:18:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:20:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:20:06 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:20:06 | INFO | niworkflows | Generating visual report
2025-10-09 22:20:25 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 133.364937s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/post_n4".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:20:29 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.744646s.
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/sp_mask".
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:20:31 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.014765s.
2025-10-09 22:20:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/drift".
2025-10-09 22:20:32 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:20:32 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9925, 0.9945, 1.0008, 0.9972, 0.993, 0.986, 0.9932, 1.0015.
2025-10-09 22:20:34 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.187777s.
2025-10-09 22:20:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/EPI2MNI".
2025-10-09 22:20:36 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:20:36 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:21:10 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/EPI2MNI/stderr.nipype-init).
2025-10-09 22:21:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:21:10 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/SharpenEPI/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:22:29 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:22:29 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:22:29 | INFO | niworkflows | Generating visual report
2025-10-09 22:22:49 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 132.761941s.
2025-10-09 22:22:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/final_masked".
2025-10-09 22:22:50 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038734s.
2025-10-09 22:22:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/dwidenoise".
2025-10-09 22:22:52 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:16 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 23.829468s.
2025-10-09 22:23:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ResampleSegmentation".
2025-10-09 22:23:16 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:20 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.138437s.
2025-10-09 22:23:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/final_masked".
2025-10-09 22:23:22 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:22 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037176s.
2025-10-09 22:23:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/dwidenoise".
2025-10-09 22:23:24 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 23.779379s.
2025-10-09 22:23:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ResampleSegmentation".
2025-10-09 22:23:48 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:52 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.938108s.
2025-10-09 22:23:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/final_masked".
2025-10-09 22:23:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.057183s.
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/dwidenoise".
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.286169s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3391dbd736552e6bef56e0eb345064d14b3723a4/ResampleSegmentation".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.911674s.
2025-10-09 22:24:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/final_masked".
2025-10-09 22:24:46 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:46 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038601s.
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/dwidenoise".
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:25:31 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 42.643015s.
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ResampleSegmentation".
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:25:36 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.848145s.
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/dwimodel".
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:42 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.309502s.
2025-10-09 22:25:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/estimate_sigma".
2025-10-09 22:25:44 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:44 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.041432s.
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/get_wm".
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.03933s.
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/dwimodel".
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:52 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.224214s.
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/estimate_sigma".
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.041493s.
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/get_wm".
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039453s.
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/dwimodel".
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.697105s.
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3391dbd736552e6bef56e0eb345064d14b3723a4/estimate_sigma".
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042362s.
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/get_wm".
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038214s.
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/dwimodel".
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.737126s.
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/estimate_sigma".
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043153s.
2025-10-09 22:26:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/get_wm".
2025-10-09 22:26:16 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:16 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039117s.
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/cc_mask".
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.581703s.
2025-10-09 22:26:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_fa".
2025-10-09 22:26:20 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.475932s.
2025-10-09 22:26:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_md".
2025-10-09 22:26:22 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.904231s.
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/plot_heatmap".
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:27 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.3684180000000001s.
2025-10-09 22:26:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/cc_mask".
2025-10-09 22:26:28 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:29 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.603661s.
2025-10-09 22:26:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_fa".
2025-10-09 22:26:30 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:32 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.759551s.
2025-10-09 22:26:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_md".
2025-10-09 22:26:32 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:34 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.9458600000000001s.
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/plot_heatmap".
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:37 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.2848220000000001s.
2025-10-09 22:26:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/cc_mask".
2025-10-09 22:26:38 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.582545s.
2025-10-09 22:26:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_fa".
2025-10-09 22:26:40 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:42 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.9104860000000001s.
2025-10-09 22:26:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_md".
2025-10-09 22:26:44 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.960388s.
2025-10-09 22:26:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/plot_heatmap".
2025-10-09 22:26:48 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:49 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.3472819999999999s.
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/cc_mask".
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.569863s.
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_fa".
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.5881210000000001s.
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_md".
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.736159s.
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/plot_heatmap".
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.35483s.
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_fa".
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005416s.
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_md".
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005384s.
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_hm".
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005078s.
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_fa".
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005317s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_md".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005298s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_hm".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.0052s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_fa".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005378s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_md".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005272s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_hm".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005214s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_fa".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005193s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_md".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005387s.
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_hm".
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005313s.
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 10.132926s.
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:27:20 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 10.061151s.
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:27:32 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 9.911822s.
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/864b668dd04594af2b8c1f4be5ca4649277018bc/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/864b668dd04594af2b8c1f4be5ca4649277018bc/Enhance".
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.717296s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/864b668dd04594af2b8c1f4be5ca4649277018bc/format_tpm_names".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:40 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.070758s.
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/864b668dd04594af2b8c1f4be5ca4649277018bc/Grad".
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:49 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.302112s.
2025-10-09 22:27:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/864b668dd04594af2b8c1f4be5ca4649277018bc/apply_mask".
2025-10-09 22:27:50 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:27:50 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.314596s.
2025-10-09 22:27:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/864b668dd04594af2b8c1f4be5ca4649277018bc/GradientThreshold".
2025-10-09 22:27:52 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:28:08 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.984021s.
2025-10-09 22:28:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/864b668dd04594af2b8c1f4be5ca4649277018bc/segmentation".
2025-10-09 22:28:10 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 104.924418s.
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/864b668dd04594af2b8c1f4be5ca4649277018bc/ArtifactMask".
2025-10-09 22:29:56 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:30:03 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.867708s.
2025-10-09 22:30:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotHeadmask".
2025-10-09 22:30:04 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.707391s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/864b668dd04594af2b8c1f4be5ca4649277018bc/harmonize".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.32951s.
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotSegmentation".
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.921084s.
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/864b668dd04594af2b8c1f4be5ca4649277018bc/provenance".
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.071824s.
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/864b668dd04594af2b8c1f4be5ca4649277018bc/ComputeQI2".
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 12.592676s.
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotAirmask".
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:30:33 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.3674939999999998s.
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/PlotArtmask".
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:30:37 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.321538s.
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_headmask".
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004929s.
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/864b668dd04594af2b8c1f4be5ca4649277018bc/measures".
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:30:42 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.3386)
2025-10-09 22:30:42 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.3386)
2025-10-09 22:30:42 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.3386)
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.37459s.
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_segm".
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.005107s.
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_noisefit".
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004962s.
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_airmask".
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.005211s.
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/864b668dd04594af2b8c1f4be5ca4649277018bc/ds_report_artmask".
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.005023s.
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/864b668dd04594af2b8c1f4be5ca4649277018bc/datasink".
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000607s.
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/averages/mapflow/_averages0".
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.310702s.
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/averages/mapflow/_averages1".
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.307992s.
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/averages/mapflow/_averages0".
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/averages/mapflow/_averages1".
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:30:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/motion_correct".
2025-10-09 22:30:56 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 180.060345s.
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ComputeFD".
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001268s.
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/bvec_rot".
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.01839s.
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/stddev/mapflow/_stddev0".
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:03 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.511267s.
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/stddev/mapflow/_stddev1".
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:05 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.443656s.
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/stddev/mapflow/_stddev0".
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/stddev/mapflow/_stddev1".
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/averages/mapflow/_averages0".
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:09 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.319636s.
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/averages/mapflow/_averages1".
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:11 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.387432s.
2025-10-09 22:34:12 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/averages/mapflow/_averages0".
2025-10-09 22:34:12 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:34:12 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:34:12 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/averages/mapflow/_averages1".
2025-10-09 22:34:12 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:34:12 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/motion_correct".
2025-10-09 22:34:14 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 183.935066s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ComputeFD".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00621s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/bvec_rot".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018578s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/stddev/mapflow/_stddev0".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.507963s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/stddev/mapflow/_stddev1".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.44392s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/stddev/mapflow/_stddev0".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/stddev/mapflow/_stddev1".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/averages/mapflow/_averages0".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.390111s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/averages/mapflow/_averages1".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.430182s.
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/averages/mapflow/_averages0".
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/averages/mapflow/_averages1".
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3391dbd736552e6bef56e0eb345064d14b3723a4/motion_correct".
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:10 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 276.160305s.
2025-10-09 22:42:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3391dbd736552e6bef56e0eb345064d14b3723a4/ComputeFD".
2025-10-09 22:42:12 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:42:12 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001451s.
2025-10-09 22:42:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3391dbd736552e6bef56e0eb345064d14b3723a4/bvec_rot".
2025-10-09 22:42:14 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:42:14 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.021238s.
2025-10-09 22:42:16 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/stddev/mapflow/_stddev0".
2025-10-09 22:42:16 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.592467s.
2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/stddev/mapflow/_stddev1".
2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.600517s.
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/stddev/mapflow/_stddev0".
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/stddev/mapflow/_stddev1".
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:42:22 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/averages/mapflow/_averages0".
2025-10-09 22:42:22 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:23 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.396177s.
2025-10-09 22:42:24 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/averages/mapflow/_averages1".
2025-10-09 22:42:24 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:25 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.392042s.
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/averages/mapflow/_averages0".
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/averages/mapflow/_averages1".
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/motion_correct".
2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 276.001667s.
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ComputeFD".
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001321s.
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/bvec_rot".
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.035683s.
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/stddev/mapflow/_stddev0".
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.67258s.
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/stddev/mapflow/_stddev1".
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.586216s.
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/stddev/mapflow/_stddev0".
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/stddev/mapflow/_stddev1".
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.535841s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.7305540000000001s.
2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.154681s.
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:28 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.529088s.
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/measures".
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.305985s.
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/datasink".
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000596s.
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:37 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/stddev/mapflow/_stddev0/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/averages/mapflow/_averages0/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:37 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:56 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.408866s.
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:57 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/stddev/mapflow/_stddev1/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/averages/mapflow/_averages1/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:57 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.847833s.
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:19 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:19 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:20 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.455147s.
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:22 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.5478969999999999s.
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.147597s.
2025-10-09 22:48:27 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:27 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:30 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.335712s.
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/measures".
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.007105s.
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/datasink".
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000509s.
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:39 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/stddev/mapflow/_stddev0/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/averages/mapflow/_averages0/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:39 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.064588s.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:57 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/stddev/mapflow/_stddev1/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/averages/mapflow/_averages1/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:57 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.829911s.
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:49:19 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:49:19 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.404635s.
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:22 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.512615s.
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.417335s.
2025-10-09 22:49:27 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:27 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:31 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.685194s.
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3391dbd736552e6bef56e0eb345064d14b3723a4/measures".
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.310843s.
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3391dbd736552e6bef56e0eb345064d14b3723a4/datasink".
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000454s.
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:41 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/stddev/mapflow/_stddev0/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/averages/mapflow/_averages0/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:41 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 18.031065s.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:50:01 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/stddev/mapflow/_stddev1/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/3391dbd736552e6bef56e0eb345064d14b3723a4/averages/mapflow/_averages1/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:50:01 | INFO | nipype.interface | Generating visual report
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.15887s.
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:50:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:50:23 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:50:24 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.482694s.
2025-10-09 22:50:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:50:25 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:50:26 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.589935s.
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.385459s.
2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:50:35 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.587444s.
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/measures".
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:50:44 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.391351s.
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/datasink".
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000472s.
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:50:45 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/stddev/mapflow/_stddev0/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/averages/mapflow/_averages0/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:50:45 | INFO | nipype.interface | Generating visual report
2025-10-09 22:51:04 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 18.794853s.
2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:51:05 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/stddev/mapflow/_stddev1/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/averages/mapflow/_averages1/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:51:05 | INFO | nipype.interface | Generating visual report
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.412321s.
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004999s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005015s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004818s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004888s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004804s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004788s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00475s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004928s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005376s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004972s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005095s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005248s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00503s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004959s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004545s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004305s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005081s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0bf51a90837b32d6bfe5c21104c1cb2a776c5d39/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00448s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004708s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004636s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004754s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c8e2e3694f6dacdb76b6b763daf39fe2fd03725/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004411s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004613s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004495s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004609s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3391dbd736552e6bef56e0eb345064d14b3723a4/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004345s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004715s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004406s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004891s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004894s.
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004876s.
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b90361b4010d0d2fa7eb730853fdaee1f5913ab6/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004756s.
2025-10-09 22:51:33 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:51:34 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:51:34 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 51s per subject.
2025-10-09 22:51:34 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 54min 17s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/anat/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-107_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-210_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs086 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_470396/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215716_076308d4-440f-4536-adcd-e5422b367098.toml (file)
add(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_info.json (file)
add(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_stderr (file)
add(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_stdout (file)
add(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_usage.json (file)
add(ok): logs/mriqc-20251009-215716_076308d4-440f-4536-adcd-e5422b367098.log (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-fa_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-md_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-fa_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_desc-md_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-fa_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_desc-md_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-fa_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_desc-md_dwi.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs086/ses-s1Bx1/anat/sub-cIVs086_ses-s1Bx1_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi.json (file)
add(ok): sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi.json (file)
add(ok): sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi.json (file)
add(ok): sub-cIVs086/ses-s1Bx1/dwi/sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi.json (file)
add(ok): sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_dwi.html (file)
add(ok): sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-211_dwi.html (file)
add(ok): sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-106_dwi.html (file)
add(ok): sub-cIVs086_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-209_dwi.html (file)
add(ok): sub-cIVs086_ses-s1Bx1_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215716_076308d4-440f-4536-adcd-e5422b367098.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs086_2025.10.09T23.57.16-592404_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215716_076308d4-440f-4536-adcd-e5422b367098.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs086/figures/sub-cIVs086_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-108_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
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action summary:
copy (ok: 53)
flock: getting lock took 41.472039 seconds
flock: executing git
SUCCESS
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