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ds003416-mriqc/logs/sub-cIVs074_10066466.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_3950116/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3950116/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3950116/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3950116/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:56:51 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:56:51 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:56:51 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:56:52 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:56:52 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:56:52 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215649_83716c29-3a32-4d53-9800-d8acdd221258.toml.
2025-10-09 21:56:56 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:56:57 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:56:58 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:56:59 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:57:03 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:57:08 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:57:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/f919540c8cbd7d553f69cd4ef8e1e303f753b148/conform".
2025-10-09 21:57:08 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:57:08 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.697971s.
2025-10-09 21:57:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/load_bmat".
2025-10-09 21:57:10 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:10 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.185698s.
2025-10-09 21:57:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/sanitize".
2025-10-09 21:57:12 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:13 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.773893s.
2025-10-09 21:57:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4ab85f3ae5fe28449242672f0326236c06faa381/provenance".
2025-10-09 21:57:14 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:14 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020832s.
2025-10-09 21:57:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/load_bmat".
2025-10-09 21:57:14 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:14 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.026867s.
2025-10-09 21:57:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/sanitize".
2025-10-09 21:57:16 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:17 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.854547s.
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/89d43c060e93ebab96b607890a60f0adda264fe4/provenance".
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.038735s.
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/load_bmat".
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.027585s.
2025-10-09 21:57:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/sanitize".
2025-10-09 21:57:20 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:21 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.079313s.
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/provenance".
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025077s.
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/load_bmat".
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.051469s.
2025-10-09 21:57:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/sanitize".
2025-10-09 21:57:24 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:25 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.025027s.
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/provenance".
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025027s.
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/pre_clip".
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:57:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 10.966939s.
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/f919540c8cbd7d553f69cd4ef8e1e303f753b148/RotationMask".
2025-10-09 21:57:38 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:57:39 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.082351s.
2025-10-09 21:57:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotMosaicNoise".
2025-10-09 21:57:40 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.376237s.
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/shells".
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:46 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000731s.
2025-10-09 21:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/piesno".
2025-10-09 21:57:48 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.075009s.
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/shells".
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00069s.
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/piesno".
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.152162s.
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/shells".
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000945s.
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/piesno".
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.485042s.
2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/shells".
2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00074s.
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/piesno".
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.818757s.
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/pre_n4".
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:14 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 132.060704s.
2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_background".
2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009907s.
2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/dwi_ref".
2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:18 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 2.347316s.
2025-10-09 22:00:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/get_lowb".
2025-10-09 22:00:20 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:22 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 2.066199s.
2025-10-09 22:00:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/dwi_ref".
2025-10-09 22:00:24 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:25 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.873945s.
2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/get_lowb".
2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.354908s.
2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/dwi_ref".
2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:29 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.74922s.
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/get_lowb".
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.460859s.
2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/dwi_ref".
2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:33 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.702049s.
2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/get_lowb".
2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.441804s.
2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/synthstrip".
2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:02:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 101.442314s.
2025-10-09 22:02:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/pre_clip".
2025-10-09 22:02:18 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:19 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.7199s.
2025-10-09 22:02:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/SharpenEPI".
2025-10-09 22:02:20 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.20379s.
2025-10-09 22:02:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/hmc_b0".
2025-10-09 22:02:30 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:53 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.995164s.
2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/pre_clip".
2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.673316s.
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/SharpenEPI".
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:04 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.109387s.
2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/hmc_b0".
2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.395909s.
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/pre_clip".
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:31 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.701275s.
2025-10-09 22:03:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/SharpenEPI".
2025-10-09 22:03:32 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.944428s.
2025-10-09 22:03:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/hmc_b0".
2025-10-09 22:03:42 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:09 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 26.588216s.
2025-10-09 22:04:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/pre_clip".
2025-10-09 22:04:10 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:11 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.682376s.
2025-10-09 22:04:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/SharpenEPI".
2025-10-09 22:04:12 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.82639s.
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/hmc_b0".
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:47 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.46348s.
2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/post_n4".
2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:17 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 28.593034s.
2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f919540c8cbd7d553f69cd4ef8e1e303f753b148/smoothness".
2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:05:24 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.713761s.
2025-10-09 22:05:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotMosaicZoomed".
2025-10-09 22:05:24 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.750545s.
2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotBrainmask".
2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:05:34 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.29997s.
2025-10-09 22:05:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/pre_n4".
2025-10-09 22:05:36 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.037167s.
2025-10-09 22:05:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/pre_n4".
2025-10-09 22:05:46 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:54 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.972275s.
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/pre_n4".
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.974096s.
2025-10-09 22:06:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/pre_n4".
2025-10-09 22:06:06 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:14 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.948916s.
2025-10-09 22:06:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/final_masked".
2025-10-09 22:06:16 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:06:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.325213s.
2025-10-09 22:06:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization".
2025-10-09 22:06:18 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:06:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:07:46 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:07:46 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:08:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:08:08 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:08:08 | INFO | niworkflows | Generating visual report
2025-10-09 22:08:29 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 130.862748s.
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_zoomed".
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005471s.
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_bmask".
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005683s.
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/synthstrip".
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:18 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.027167s.
2025-10-09 22:09:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/synthstrip".
2025-10-09 22:09:20 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 51.174311s.
2025-10-09 22:10:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/synthstrip".
2025-10-09 22:10:12 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:05 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 53.088307s.
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/synthstrip".
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.378158s.
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_norm".
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005658s.
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/post_n4".
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:11:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.816621s.
2025-10-09 22:11:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/sp_mask".
2025-10-09 22:11:58 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:11:59 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.680479s.
2025-10-09 22:12:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/drift".
2025-10-09 22:12:00 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:12:01 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9999, 0.9975, 1.0013, 0.9985, 0.9983, 0.9999.
2025-10-09 22:12:02 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.7998859999999999s.
2025-10-09 22:12:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/EPI2MNI".
2025-10-09 22:12:04 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:12:04 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:12:35 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/EPI2MNI/stderr.nipype-init).
2025-10-09 22:12:35 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:12:35 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:13:55 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:13:55 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:13:55 | INFO | niworkflows | Generating visual report
2025-10-09 22:14:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.92396s.
2025-10-09 22:14:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/post_n4".
2025-10-09 22:14:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:14:17 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.620858s.
2025-10-09 22:14:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/sp_mask".
2025-10-09 22:14:18 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:14:19 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.670779s.
2025-10-09 22:14:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/drift".
2025-10-09 22:14:20 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:14:20 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0005, 0.9932, 1.0015, 1.001, 0.9997, 1.0005.
2025-10-09 22:14:22 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.646302s.
2025-10-09 22:14:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/EPI2MNI".
2025-10-09 22:14:22 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:14:22 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:14:58 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/EPI2MNI/stderr.nipype-init).
2025-10-09 22:14:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:14:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:16:12 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:16:12 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:16:12 | INFO | niworkflows | Generating visual report
2025-10-09 22:16:31 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.530126s.
2025-10-09 22:16:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/post_n4".
2025-10-09 22:16:32 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:16:35 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.657266s.
2025-10-09 22:16:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/sp_mask".
2025-10-09 22:16:36 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:16:37 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.96696s.
2025-10-09 22:16:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/drift".
2025-10-09 22:16:38 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:16:39 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9982, 0.9968, 0.9982, 1.0006, 0.9972, 0.9934, 0.9964, 0.9977.
2025-10-09 22:16:40 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.109816s.
2025-10-09 22:16:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/EPI2MNI".
2025-10-09 22:16:42 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:16:42 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:17:16 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/EPI2MNI/stderr.nipype-init).
2025-10-09 22:17:16 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:17:16 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:18:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:18:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:18:30 | INFO | niworkflows | Generating visual report
2025-10-09 22:18:49 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.514447s.
2025-10-09 22:18:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/post_n4".
2025-10-09 22:18:50 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:18:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.629013s.
2025-10-09 22:18:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/sp_mask".
2025-10-09 22:18:54 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:18:55 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.921363s.
2025-10-09 22:18:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/drift".
2025-10-09 22:18:56 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:18:57 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9991, 0.9952, 0.9978, 0.9984, 0.9928, 0.9273, 0.9917, 0.9971.
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.150976s.
2025-10-09 22:19:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/EPI2MNI".
2025-10-09 22:19:00 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:19:00 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:19:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:19:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/SharpenEPI/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:20:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:20:50 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:20:50 | INFO | niworkflows | Generating visual report
2025-10-09 22:21:10 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 129.142676s.
2025-10-09 22:21:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4ab85f3ae5fe28449242672f0326236c06faa381/final_masked".
2025-10-09 22:21:10 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.041099s.
2025-10-09 22:21:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/dwidenoise".
2025-10-09 22:21:12 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:21:37 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.463701s.
2025-10-09 22:21:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4ab85f3ae5fe28449242672f0326236c06faa381/ResampleSegmentation".
2025-10-09 22:21:38 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:21:43 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.157036s.
2025-10-09 22:21:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/89d43c060e93ebab96b607890a60f0adda264fe4/final_masked".
2025-10-09 22:21:44 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:45 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.03869s.
2025-10-09 22:21:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/dwidenoise".
2025-10-09 22:21:46 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.409346s.
2025-10-09 22:22:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/89d43c060e93ebab96b607890a60f0adda264fe4/ResampleSegmentation".
2025-10-09 22:22:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.6642s.
2025-10-09 22:22:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/final_masked".
2025-10-09 22:22:18 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:19 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039759s.
2025-10-09 22:22:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/dwidenoise".
2025-10-09 22:22:20 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:04 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.954804s.
2025-10-09 22:23:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ResampleSegmentation".
2025-10-09 22:23:07 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.460727s.
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/final_masked".
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.040266s.
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/dwidenoise".
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:58 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.536376s.
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ResampleSegmentation".
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.247316s.
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/dwimodel".
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.402699s.
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4ab85f3ae5fe28449242672f0326236c06faa381/estimate_sigma".
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042168s.
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/get_wm".
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039434s.
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/dwimodel".
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.391314s.
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/89d43c060e93ebab96b607890a60f0adda264fe4/estimate_sigma".
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.04273s.
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/get_wm".
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041377s.
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/dwimodel".
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:29 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.850742s.
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/estimate_sigma".
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043675s.
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/get_wm".
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038626s.
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/dwimodel".
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.855723s.
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/estimate_sigma".
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042464s.
2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/get_wm".
2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.037951s.
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/cc_mask".
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.600035s.
2025-10-09 22:24:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_fa".
2025-10-09 22:24:47 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.580091s.
2025-10-09 22:24:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_md".
2025-10-09 22:24:49 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:50 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.925725s.
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/plot_heatmap".
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.341466s.
2025-10-09 22:24:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/cc_mask".
2025-10-09 22:24:55 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:55 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.606523s.
2025-10-09 22:24:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_fa".
2025-10-09 22:24:57 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:59 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 2.005367s.
2025-10-09 22:25:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_md".
2025-10-09 22:25:01 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:03 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.107082s.
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/plot_heatmap".
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:06 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.348964s.
2025-10-09 22:25:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/cc_mask".
2025-10-09 22:25:07 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:07 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.605903s.
2025-10-09 22:25:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_fa".
2025-10-09 22:25:09 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.818461s.
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_md".
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:13 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.981454s.
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/plot_heatmap".
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:16 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.377737s.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/cc_mask".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.57685s.
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_fa".
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 2.048708s.
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_md".
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:24 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.767514s.
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/plot_heatmap".
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.418316s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_fa".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005424s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_md".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.007481s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_hm".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005444s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_fa".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005518s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_md".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005645s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_hm".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005493s.
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_fa".
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005906s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_md".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005251s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_hm".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.010678s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_fa".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005401s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_md".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005338s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_hm".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005731s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 10.333344s.
2025-10-09 22:25:41 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:25:41 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:51 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 10.40701s.
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 10.405153s.
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f919540c8cbd7d553f69cd4ef8e1e303f753b148/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f919540c8cbd7d553f69cd4ef8e1e303f753b148/Enhance".
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.793471s.
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/f919540c8cbd7d553f69cd4ef8e1e303f753b148/format_tpm_names".
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.03371s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f919540c8cbd7d553f69cd4ef8e1e303f753b148/Grad".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:20 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.388152s.
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f919540c8cbd7d553f69cd4ef8e1e303f753b148/apply_mask".
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.355519s.
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f919540c8cbd7d553f69cd4ef8e1e303f753b148/GradientThreshold".
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 16.692785s.
2025-10-09 22:26:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/f919540c8cbd7d553f69cd4ef8e1e303f753b148/segmentation".
2025-10-09 22:26:41 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 104.668456s.
2025-10-09 22:28:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ArtifactMask".
2025-10-09 22:28:27 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:28:34 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.310967s.
2025-10-09 22:28:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotHeadmask".
2025-10-09 22:28:35 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.738343s.
2025-10-09 22:28:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f919540c8cbd7d553f69cd4ef8e1e303f753b148/harmonize".
2025-10-09 22:28:39 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:28:40 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.244199s.
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotSegmentation".
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:45 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 4.035254s.
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f919540c8cbd7d553f69cd4ef8e1e303f753b148/provenance".
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.08138s.
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ComputeQI2".
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:29:00 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.37197s.
2025-10-09 22:29:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotAirmask".
2025-10-09 22:29:01 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:04 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.654887s.
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/PlotArtmask".
2025-10-09 22:29:05 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:08 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.433427s.
2025-10-09 22:29:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_headmask".
2025-10-09 22:29:09 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:09 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.005398s.
2025-10-09 22:29:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f919540c8cbd7d553f69cd4ef8e1e303f753b148/measures".
2025-10-09 22:29:09 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:29:13 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.4064)
2025-10-09 22:29:13 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.4064)
2025-10-09 22:29:13 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.4064)
2025-10-09 22:29:20 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 10.948404s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_segm".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.005098s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_noisefit".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005158s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_airmask".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.005097s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f919540c8cbd7d553f69cd4ef8e1e303f753b148/ds_report_artmask".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004897s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f919540c8cbd7d553f69cd4ef8e1e303f753b148/datasink".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000664s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/averages/mapflow/_averages0".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:22 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.320915s.
2025-10-09 22:29:23 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/averages/mapflow/_averages1".
2025-10-09 22:29:23 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:29:23 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.342327s.
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/averages/mapflow/_averages0".
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/averages/mapflow/_averages1".
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:29:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/4ab85f3ae5fe28449242672f0326236c06faa381/motion_correct".
2025-10-09 22:29:27 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:32:40 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 193.460825s.
2025-10-09 22:32:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/4ab85f3ae5fe28449242672f0326236c06faa381/ComputeFD".
2025-10-09 22:32:41 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:32:41 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005506s.
2025-10-09 22:32:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/4ab85f3ae5fe28449242672f0326236c06faa381/bvec_rot".
2025-10-09 22:32:43 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:32:43 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018037s.
2025-10-09 22:32:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/stddev/mapflow/_stddev0".
2025-10-09 22:32:45 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:45 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.429874s.
2025-10-09 22:32:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/stddev/mapflow/_stddev1".
2025-10-09 22:32:47 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:47 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.43239s.
2025-10-09 22:32:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/stddev/mapflow/_stddev0".
2025-10-09 22:32:49 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:32:49 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:32:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/stddev/mapflow/_stddev1".
2025-10-09 22:32:49 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:32:49 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:32:51 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/averages/mapflow/_averages0".
2025-10-09 22:32:51 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:51 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.307061s.
2025-10-09 22:32:53 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/averages/mapflow/_averages1".
2025-10-09 22:32:53 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:32:53 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.316843s.
2025-10-09 22:32:55 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/averages/mapflow/_averages0".
2025-10-09 22:32:55 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:32:55 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:32:55 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/averages/mapflow/_averages1".
2025-10-09 22:32:55 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:32:55 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:32:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/89d43c060e93ebab96b607890a60f0adda264fe4/motion_correct".
2025-10-09 22:32:57 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:35:49 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 172.70401s.
2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/89d43c060e93ebab96b607890a60f0adda264fe4/ComputeFD".
2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004808s.
2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/89d43c060e93ebab96b607890a60f0adda264fe4/bvec_rot".
2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.01766s.
2025-10-09 22:35:55 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/stddev/mapflow/_stddev0".
2025-10-09 22:35:55 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:35:55 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.454371s.
2025-10-09 22:35:57 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/stddev/mapflow/_stddev1".
2025-10-09 22:35:57 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:35:57 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.42436s.
2025-10-09 22:35:59 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/stddev/mapflow/_stddev0".
2025-10-09 22:35:59 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:35:59 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:35:59 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/stddev/mapflow/_stddev1".
2025-10-09 22:35:59 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:35:59 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:36:01 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/averages/mapflow/_averages0".
2025-10-09 22:36:01 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:36:01 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.387209s.
2025-10-09 22:36:03 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/averages/mapflow/_averages1".
2025-10-09 22:36:03 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:36:03 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.378415s.
2025-10-09 22:36:05 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/averages/mapflow/_averages0".
2025-10-09 22:36:05 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:36:05 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:36:05 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/averages/mapflow/_averages1".
2025-10-09 22:36:05 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:36:05 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:36:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/motion_correct".
2025-10-09 22:36:07 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:17 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 249.904526s.
2025-10-09 22:40:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ComputeFD".
2025-10-09 22:40:17 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:40:17 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001413s.
2025-10-09 22:40:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/bvec_rot".
2025-10-09 22:40:19 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:40:19 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.036281s.
2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/stddev/mapflow/_stddev0".
2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:22 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.608104s.
2025-10-09 22:40:23 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/stddev/mapflow/_stddev1".
2025-10-09 22:40:23 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.611s.
2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/stddev/mapflow/_stddev0".
2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/stddev/mapflow/_stddev1".
2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/averages/mapflow/_averages0".
2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.420184s.
2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/averages/mapflow/_averages1".
2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.377265s.
2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/averages/mapflow/_averages0".
2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/averages/mapflow/_averages1".
2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:40:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/motion_correct".
2025-10-09 22:40:33 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:47 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 254.278459s.
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ComputeFD".
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001373s.
2025-10-09 22:44:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/bvec_rot".
2025-10-09 22:44:51 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:44:51 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020379s.
2025-10-09 22:44:53 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/stddev/mapflow/_stddev0".
2025-10-09 22:44:53 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.584321s.
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/stddev/mapflow/_stddev1".
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.575059s.
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/stddev/mapflow/_stddev0".
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/stddev/mapflow/_stddev1".
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.6230440000000002s.
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.7142089999999999s.
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.130527s.
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.5555250000000003s.
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4ab85f3ae5fe28449242672f0326236c06faa381/measures".
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:17 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.979437s.
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4ab85f3ae5fe28449242672f0326236c06faa381/datasink".
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000541s.
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:19 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:19 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/stddev/mapflow/_stddev0/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/averages/mapflow/_averages0/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:19 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.260107s.
2025-10-09 22:45:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:37 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:37 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/stddev/mapflow/_stddev1/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/4ab85f3ae5fe28449242672f0326236c06faa381/averages/mapflow/_averages1/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:37 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.686881s.
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:45:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:59 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:01 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.501125s.
2025-10-09 22:46:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:01 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.610406s.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.134578s.
2025-10-09 22:46:07 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:07 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.472982s.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/89d43c060e93ebab96b607890a60f0adda264fe4/measures".
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:17 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.097549s.
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/89d43c060e93ebab96b607890a60f0adda264fe4/datasink".
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000636s.
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:19 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/stddev/mapflow/_stddev0/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/averages/mapflow/_averages0/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:19 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.989975s.
2025-10-09 22:46:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:41 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:41 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/stddev/mapflow/_stddev1/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/89d43c060e93ebab96b607890a60f0adda264fe4/averages/mapflow/_averages1/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:41 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.470029s.
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.489971s.
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.51671s.
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.465998s.
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.648019s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/measures".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.499889s.
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/datasink".
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000577s.
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:25 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/stddev/mapflow/_stddev0/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/averages/mapflow/_averages0/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:25 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.643504s.
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:45 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/stddev/mapflow/_stddev1/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/averages/mapflow/_averages1/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:45 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.207924s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.400244s.
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.626588s.
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.425965s.
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:20 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.623329s.
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/measures".
2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.476147s.
2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/datasink".
2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000647s.
2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:29 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/stddev/mapflow/_stddev0/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/averages/mapflow/_averages0/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:29 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.563384s.
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:47 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/stddev/mapflow/_stddev1/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/averages/mapflow/_averages1/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:47 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.827928s.
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004924s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005001s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004963s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004881s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005154s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005116s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005075s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005095s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005029s.
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004932s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.0051s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004983s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004932s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005004s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004773s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004482s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.012484s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4ab85f3ae5fe28449242672f0326236c06faa381/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004944s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005133s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005054s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004815s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/89d43c060e93ebab96b607890a60f0adda264fe4/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004865s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004911s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004827s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005056s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/ae20057a768da2b7c43bbc16a6267ff3fc7170d4/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004913s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004925s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004624s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005145s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.008028s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004982s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/345dd98dd2d240a6d779baa6185e3f4d51c1ac33/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004904s.
2025-10-09 22:49:15 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:49:16 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:49:16 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 29s per subject.
2025-10-09 22:49:16 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 52min 27s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/anat/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs074 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_3950116/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215649_83716c29-3a32-4d53-9800-d8acdd221258.toml (file)
add(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_info.json (file)
add(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_stderr (file)
add(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_stdout (file)
add(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_usage.json (file)
add(ok): logs/mriqc-20251009-215649_83716c29-3a32-4d53-9800-d8acdd221258.log (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-md_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-fa_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-md_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-fa_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_desc-md_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-fa_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_desc-md_dwi.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs074/ses-s1Bx1/anat/sub-cIVs074_ses-s1Bx1_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi.json (file)
add(ok): sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi.json (file)
add(ok): sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.json (file)
add(ok): sub-cIVs074/ses-s1Bx1/dwi/sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi.json (file)
add(ok): sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_dwi.html (file)
add(ok): sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_dwi.html (file)
add(ok): sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-112_dwi.html (file)
add(ok): sub-cIVs074_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-215_dwi.html (file)
add(ok): sub-cIVs074_ses-s1Bx1_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215649_83716c29-3a32-4d53-9800-d8acdd221258.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs074_2025.10.09T23.56.48-4073270_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215649_83716c29-3a32-4d53-9800-d8acdd221258.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-114_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs074/figures/sub-cIVs074_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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action summary:
copy (ok: 53)
flock: getting lock took 0.001032 seconds
flock: executing git
SUCCESS
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