ds003416-mriqc/logs/sub-cIVs066_10066403.out
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_2917413/ds (dataset)
install(ok): /var/lib/condor/execute/dir_2917413/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_2917413/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2917413/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:57:37 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:57:37 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:37 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:57:37 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:57:37 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:37 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215735_4f0ff533-1ddd-45b2-8e03-825858cda3ff.toml.
2025-10-09 21:57:40 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:57:41 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:57:42 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:57:42 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:57:46 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:57:49 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/f83423fe28bf2998a9b67a078e675d05021ee07d/conform".
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.260969s.
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/load_bmat".
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.155321s.
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/sanitize".
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.571945s.
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b11e90e85c6d501b2e36123427f61f385161ff77/provenance".
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.015988s.
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/load_bmat".
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020337s.
2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/sanitize".
2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.576854s.
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/provenance".
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.015975s.
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/load_bmat".
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021927s.
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/sanitize".
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.750368s.
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/f0cd51d349e063f4a76aec20b6bed5be11acdb97/provenance".
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.02044s.
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/load_bmat".
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020913s.
2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/sanitize".
2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.74518s.
2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/78f42bb8d1fe1f92048140c9acf197b3a583a92b/provenance".
2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020284s.
2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/pre_clip".
2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 6.881069s.
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/f83423fe28bf2998a9b67a078e675d05021ee07d/RotationMask".
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.666998s.
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotMosaicNoise".
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.876724s.
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/shells".
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000623s.
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/piesno".
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.703s.
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/shells".
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000598s.
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/piesno".
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.676965s.
2025-10-09 21:58:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/shells".
2025-10-09 21:58:30 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:30 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000622s.
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/piesno".
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.868242s.
2025-10-09 21:58:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/shells".
2025-10-09 21:58:34 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:34 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000613s.
2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/piesno".
2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.891145s.
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/pre_n4".
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 109.76733s.
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_background".
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007059s.
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/dwi_ref".
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.377924s.
2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/get_lowb".
2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.236176s.
2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/dwi_ref".
2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.38323s.
2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/get_lowb".
2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.240989s.
2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/dwi_ref".
2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.496294s.
2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/get_lowb".
2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.322285s.
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/dwi_ref".
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.490453s.
2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/get_lowb".
2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.322213s.
2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/synthstrip".
2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 58.365065s.
2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/pre_clip".
2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.462386s.
2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/SharpenEPI".
2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.203412s.
2025-10-09 22:01:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/hmc_b0".
2025-10-09 22:01:56 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:09 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 13.691959s.
2025-10-09 22:02:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/pre_clip".
2025-10-09 22:02:10 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:10 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.4745s.
2025-10-09 22:02:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/SharpenEPI".
2025-10-09 22:02:12 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.222651s.
2025-10-09 22:02:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/hmc_b0".
2025-10-09 22:02:20 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:33 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 13.66115s.
2025-10-09 22:02:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/pre_clip".
2025-10-09 22:02:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.475883s.
2025-10-09 22:02:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/SharpenEPI".
2025-10-09 22:02:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:42 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.203458s.
2025-10-09 22:02:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/hmc_b0".
2025-10-09 22:02:44 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:01 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 17.099519s.
2025-10-09 22:03:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/pre_clip".
2025-10-09 22:03:02 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:02 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.477352s.
2025-10-09 22:03:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/SharpenEPI".
2025-10-09 22:03:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:10 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.205731s.
2025-10-09 22:03:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/hmc_b0".
2025-10-09 22:03:12 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 17.347665s.
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/post_n4".
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:51 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 21.346385s.
2025-10-09 22:03:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f83423fe28bf2998a9b67a078e675d05021ee07d/smoothness".
2025-10-09 22:03:52 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:03:55 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.292767s.
2025-10-09 22:03:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotMosaicZoomed".
2025-10-09 22:03:56 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:04:00 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.841863s.
2025-10-09 22:04:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotBrainmask".
2025-10-09 22:04:00 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.49584s.
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/pre_n4".
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.203588s.
2025-10-09 22:04:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/pre_n4".
2025-10-09 22:04:12 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.229096s.
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/pre_n4".
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:26 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.220816s.
2025-10-09 22:04:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/pre_n4".
2025-10-09 22:04:28 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:34 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.220883s.
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/final_masked".
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.217766s.
2025-10-09 22:04:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization".
2025-10-09 22:04:38 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:04:38 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:05:26 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:05:26 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:05:38 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:05:39 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:05:39 | INFO | niworkflows | Generating visual report
2025-10-09 22:05:50 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 72.589962s.
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_zoomed".
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004068s.
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_bmask".
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003805s.
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/synthstrip".
2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:06:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.349119s.
2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/synthstrip".
2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:06:58 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.377015s.
2025-10-09 22:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/synthstrip".
2025-10-09 22:07:00 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:07:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.363777s.
2025-10-09 22:07:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/synthstrip".
2025-10-09 22:07:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:08:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.35673s.
2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_norm".
2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003836s.
2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/post_n4".
2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:08:10 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.9094950000000002s.
2025-10-09 22:08:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/sp_mask".
2025-10-09 22:08:12 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:08:12 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.442886s.
2025-10-09 22:08:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/drift".
2025-10-09 22:08:14 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:08:14 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9926, 0.9878, 0.9878, 0.9894, 0.9806, 0.9897.
2025-10-09 22:08:15 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.105983s.
2025-10-09 22:08:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/EPI2MNI".
2025-10-09 22:08:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:08:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:08:37 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/EPI2MNI/stderr.nipype-init).
2025-10-09 22:08:37 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:08:37 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:09:36 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:09:36 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:09:36 | INFO | niworkflows | Generating visual report
2025-10-09 22:09:47 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.616889s.
2025-10-09 22:09:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/post_n4".
2025-10-09 22:09:48 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:09:50 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.933807s.
2025-10-09 22:09:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/sp_mask".
2025-10-09 22:09:52 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:09:52 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.443099s.
2025-10-09 22:09:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/drift".
2025-10-09 22:09:54 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:09:54 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0036, 0.9857, 1.0019, 0.9988, 0.9913, 0.9515.
2025-10-09 22:09:55 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.110701s.
2025-10-09 22:09:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/EPI2MNI".
2025-10-09 22:09:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:09:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:10:18 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/EPI2MNI/stderr.nipype-init).
2025-10-09 22:10:18 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:10:18 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:11:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:11:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:11:17 | INFO | niworkflows | Generating visual report
2025-10-09 22:11:28 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 92.597628s.
2025-10-09 22:11:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/post_n4".
2025-10-09 22:11:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:11:32 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.965188s.
2025-10-09 22:11:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/sp_mask".
2025-10-09 22:11:34 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:11:35 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.620229s.
2025-10-09 22:11:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/drift".
2025-10-09 22:11:36 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:11:36 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0004, 0.9977, 1.0005, 0.9968, 0.9887, 0.9816, 0.9809, 0.9963.
2025-10-09 22:11:37 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.404438s.
2025-10-09 22:11:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/EPI2MNI".
2025-10-09 22:11:38 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:11:38 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:12:00 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/EPI2MNI/stderr.nipype-init).
2025-10-09 22:12:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:12:00 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:13:02 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:13:02 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:13:02 | INFO | niworkflows | Generating visual report
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 95.414574s.
2025-10-09 22:13:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/post_n4".
2025-10-09 22:13:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:13:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.938796s.
2025-10-09 22:13:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/sp_mask".
2025-10-09 22:13:18 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.619843s.
2025-10-09 22:13:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/drift".
2025-10-09 22:13:20 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:13:20 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0273, 1.0201, 1.0229, 1.0197, 1.0108, 1.005, 1.0003, 0.9971.
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.403869s.
2025-10-09 22:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/EPI2MNI".
2025-10-09 22:13:22 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:13:22 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:13:44 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:13:44 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/SharpenEPI/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:14:41 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:14:41 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:14:41 | INFO | niworkflows | Generating visual report
2025-10-09 22:14:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.111057s.
2025-10-09 22:14:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b11e90e85c6d501b2e36123427f61f385161ff77/final_masked".
2025-10-09 22:14:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:14:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025083s.
2025-10-09 22:14:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/dwidenoise".
2025-10-09 22:14:56 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:15:11 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 15.337329s.
2025-10-09 22:15:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b11e90e85c6d501b2e36123427f61f385161ff77/ResampleSegmentation".
2025-10-09 22:15:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:15:15 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.855759s.
2025-10-09 22:15:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/final_masked".
2025-10-09 22:15:16 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:15:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.026134s.
2025-10-09 22:15:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/dwidenoise".
2025-10-09 22:15:18 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:15:33 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 15.480141s.
2025-10-09 22:15:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ResampleSegmentation".
2025-10-09 22:15:34 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:15:37 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.187216s.
2025-10-09 22:15:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/final_masked".
2025-10-09 22:15:38 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:15:38 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025425s.
2025-10-09 22:15:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/dwidenoise".
2025-10-09 22:15:40 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:16:08 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 27.510084s.
2025-10-09 22:16:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ResampleSegmentation".
2025-10-09 22:16:08 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:16:11 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.900404s.
2025-10-09 22:16:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/final_masked".
2025-10-09 22:16:12 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:16:12 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025295s.
2025-10-09 22:16:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/dwidenoise".
2025-10-09 22:16:14 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:16:42 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 27.497202s.
2025-10-09 22:16:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ResampleSegmentation".
2025-10-09 22:16:42 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:16:45 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.926737s.
2025-10-09 22:16:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/dwimodel".
2025-10-09 22:16:46 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:16:49 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.790887s.
2025-10-09 22:16:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b11e90e85c6d501b2e36123427f61f385161ff77/estimate_sigma".
2025-10-09 22:16:50 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:16:50 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.0295s.
2025-10-09 22:16:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/get_wm".
2025-10-09 22:16:52 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:16:52 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.028391s.
2025-10-09 22:16:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/dwimodel".
2025-10-09 22:16:54 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:16:57 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.769923s.
2025-10-09 22:16:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/estimate_sigma".
2025-10-09 22:16:58 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:16:58 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.029242s.
2025-10-09 22:17:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/get_wm".
2025-10-09 22:17:00 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:00 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.028119s.
2025-10-09 22:17:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/dwimodel".
2025-10-09 22:17:02 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:17:05 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.112485s.
2025-10-09 22:17:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/f0cd51d349e063f4a76aec20b6bed5be11acdb97/estimate_sigma".
2025-10-09 22:17:06 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:06 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.028994s.
2025-10-09 22:17:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/get_wm".
2025-10-09 22:17:08 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:08 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.028049s.
2025-10-09 22:17:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/dwimodel".
2025-10-09 22:17:10 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:17:13 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.122107s.
2025-10-09 22:17:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/78f42bb8d1fe1f92048140c9acf197b3a583a92b/estimate_sigma".
2025-10-09 22:17:14 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:14 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.029158s.
2025-10-09 22:17:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/get_wm".
2025-10-09 22:17:16 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:17:16 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.02842s.
2025-10-09 22:17:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/cc_mask".
2025-10-09 22:17:18 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:17:18 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.39598s.
2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_fa".
2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:21 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.113483s.
2025-10-09 22:17:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_md".
2025-10-09 22:17:22 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:23 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.316709s.
2025-10-09 22:17:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/plot_heatmap".
2025-10-09 22:17:24 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:17:25 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.818717s.
2025-10-09 22:17:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/cc_mask".
2025-10-09 22:17:26 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:17:26 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.406696s.
2025-10-09 22:17:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_fa".
2025-10-09 22:17:28 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:29 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.176795s.
2025-10-09 22:17:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_md".
2025-10-09 22:17:30 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:31 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.3438189999999999s.
2025-10-09 22:17:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/plot_heatmap".
2025-10-09 22:17:32 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:17:33 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.789038s.
2025-10-09 22:17:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/cc_mask".
2025-10-09 22:17:34 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:17:34 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.409374s.
2025-10-09 22:17:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_fa".
2025-10-09 22:17:36 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:37 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.211464s.
2025-10-09 22:17:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_md".
2025-10-09 22:17:38 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:39 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.333184s.
2025-10-09 22:17:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/plot_heatmap".
2025-10-09 22:17:40 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:17:41 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.831269s.
2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/cc_mask".
2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.391789s.
2025-10-09 22:17:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_fa".
2025-10-09 22:17:44 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:45 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.182919s.
2025-10-09 22:17:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_md".
2025-10-09 22:17:46 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:17:47 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.167936s.
2025-10-09 22:17:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/plot_heatmap".
2025-10-09 22:17:48 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:17:49 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.013452s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_fa".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004069s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_md".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003928s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_hm".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003935s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_fa".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.00405s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_md".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004001s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_hm".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003871s.
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_fa".
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:50 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004092s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_md".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.00403s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_hm".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003868s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_fa".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004231s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_md".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003879s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_hm".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004017s.
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:17:51 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:17:58 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 6.6726659999999995s.
2025-10-09 22:17:58 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:17:58 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:18:05 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 6.739348s.
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:18:13 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 6.747634s.
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/f83423fe28bf2998a9b67a078e675d05021ee07d/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:18:14 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:18:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f83423fe28bf2998a9b67a078e675d05021ee07d/Enhance".
2025-10-09 22:18:16 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:16 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.455557s.
2025-10-09 22:18:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/f83423fe28bf2998a9b67a078e675d05021ee07d/format_tpm_names".
2025-10-09 22:18:18 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:19 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.398498s.
2025-10-09 22:18:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f83423fe28bf2998a9b67a078e675d05021ee07d/Grad".
2025-10-09 22:18:20 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:22 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 2.026551s.
2025-10-09 22:18:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f83423fe28bf2998a9b67a078e675d05021ee07d/apply_mask".
2025-10-09 22:18:24 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:18:24 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.215135s.
2025-10-09 22:18:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/f83423fe28bf2998a9b67a078e675d05021ee07d/GradientThreshold".
2025-10-09 22:18:26 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:18:37 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 10.688293s.
2025-10-09 22:18:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/f83423fe28bf2998a9b67a078e675d05021ee07d/segmentation".
2025-10-09 22:18:38 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:19:46 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 68.430548s.
2025-10-09 22:19:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/f83423fe28bf2998a9b67a078e675d05021ee07d/ArtifactMask".
2025-10-09 22:19:48 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:19:51 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 2.5038489999999998s.
2025-10-09 22:19:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotHeadmask".
2025-10-09 22:19:52 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:19:54 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.079833s.
2025-10-09 22:19:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f83423fe28bf2998a9b67a078e675d05021ee07d/harmonize".
2025-10-09 22:19:56 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:19:57 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.587213s.
2025-10-09 22:19:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotSegmentation".
2025-10-09 22:19:58 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:20:00 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.307919s.
2025-10-09 22:20:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f83423fe28bf2998a9b67a078e675d05021ee07d/provenance".
2025-10-09 22:20:02 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:20:02 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.047293s.
2025-10-09 22:20:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f83423fe28bf2998a9b67a078e675d05021ee07d/ComputeQI2".
2025-10-09 22:20:02 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:20:10 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 7.827527s.
2025-10-09 22:20:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotAirmask".
2025-10-09 22:20:12 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:20:14 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.073968s.
2025-10-09 22:20:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/PlotArtmask".
2025-10-09 22:20:16 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:20:18 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.060476s.
2025-10-09 22:20:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_headmask".
2025-10-09 22:20:20 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:20:20 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003823s.
2025-10-09 22:20:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f83423fe28bf2998a9b67a078e675d05021ee07d/measures".
2025-10-09 22:20:20 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:20:23 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1394)
2025-10-09 22:20:23 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1394)
2025-10-09 22:20:23 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1394)
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.682508s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_segm".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003892s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_noisefit".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003886s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_airmask".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003733s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/f83423fe28bf2998a9b67a078e675d05021ee07d/ds_report_artmask".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003998s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/f83423fe28bf2998a9b67a078e675d05021ee07d/datasink".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000524s.
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/averages/mapflow/_averages0".
2025-10-09 22:20:26 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:20:27 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.233592s.
2025-10-09 22:20:28 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/averages/mapflow/_averages1".
2025-10-09 22:20:28 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:20:28 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.214793s.
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/averages/mapflow/_averages0".
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/averages/mapflow/_averages1".
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:20:30 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:20:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b11e90e85c6d501b2e36123427f61f385161ff77/motion_correct".
2025-10-09 22:20:32 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:22:24 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 112.380814s.
2025-10-09 22:22:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b11e90e85c6d501b2e36123427f61f385161ff77/ComputeFD".
2025-10-09 22:22:26 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:22:26 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.000983s.
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b11e90e85c6d501b2e36123427f61f385161ff77/bvec_rot".
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.012816s.
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/stddev/mapflow/_stddev0".
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.295272s.
2025-10-09 22:22:32 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/stddev/mapflow/_stddev1".
2025-10-09 22:22:32 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:22:32 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.313688s.
2025-10-09 22:22:34 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/stddev/mapflow/_stddev0".
2025-10-09 22:22:34 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:22:34 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:22:34 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/stddev/mapflow/_stddev1".
2025-10-09 22:22:34 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:22:34 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/averages/mapflow/_averages0".
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.235684s.
2025-10-09 22:22:38 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/averages/mapflow/_averages1".
2025-10-09 22:22:38 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:22:38 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.235947s.
2025-10-09 22:22:40 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/averages/mapflow/_averages0".
2025-10-09 22:22:40 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:22:40 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:22:40 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/averages/mapflow/_averages1".
2025-10-09 22:22:40 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:22:40 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:22:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/motion_correct".
2025-10-09 22:22:42 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 122.827283s.
2025-10-09 22:24:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ComputeFD".
2025-10-09 22:24:46 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:24:46 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004989s.
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/bvec_rot".
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020195s.
2025-10-09 22:24:50 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/stddev/mapflow/_stddev0".
2025-10-09 22:24:50 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:24:50 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.315223s.
2025-10-09 22:24:52 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/stddev/mapflow/_stddev1".
2025-10-09 22:24:52 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:24:52 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.315619s.
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/stddev/mapflow/_stddev0".
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/stddev/mapflow/_stddev1".
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:24:56 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/averages/mapflow/_averages0".
2025-10-09 22:24:56 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:24:56 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.290957s.
2025-10-09 22:24:58 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/averages/mapflow/_averages1".
2025-10-09 22:24:58 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:24:58 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.269048s.
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/averages/mapflow/_averages0".
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/averages/mapflow/_averages1".
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/motion_correct".
2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:27:28 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 145.828349s.
2025-10-09 22:27:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ComputeFD".
2025-10-09 22:27:28 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:27:28 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001065s.
2025-10-09 22:27:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/bvec_rot".
2025-10-09 22:27:30 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:27:30 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.023109s.
2025-10-09 22:27:32 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/stddev/mapflow/_stddev0".
2025-10-09 22:27:32 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:27:33 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.398018s.
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/stddev/mapflow/_stddev1".
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:27:35 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.398609s.
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/stddev/mapflow/_stddev0".
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/stddev/mapflow/_stddev1".
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/averages/mapflow/_averages0".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:27:39 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.290256s.
2025-10-09 22:27:40 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/averages/mapflow/_averages1".
2025-10-09 22:27:40 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.269414s.
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/averages/mapflow/_averages0".
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/averages/mapflow/_averages1".
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:27:42 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:27:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/motion_correct".
2025-10-09 22:27:44 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 146.026672s.
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ComputeFD".
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001051s.
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/bvec_rot".
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.014374s.
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/stddev/mapflow/_stddev0".
2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.40849s.
2025-10-09 22:30:18 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/stddev/mapflow/_stddev1".
2025-10-09 22:30:18 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.398515s.
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/stddev/mapflow/_stddev0".
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/stddev/mapflow/_stddev1".
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:30:22 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:30:22 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.072025s.
2025-10-09 22:30:24 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:30:24 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:30:25 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.138766s.
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:30:28 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:30:28 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 0.803247s.
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:30:33 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 2.478773s.
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:30:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b11e90e85c6d501b2e36123427f61f385161ff77/measures".
2025-10-09 22:30:36 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:30:39 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 2.550552s.
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b11e90e85c6d501b2e36123427f61f385161ff77/datasink".
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000447s.
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:30:40 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/stddev/mapflow/_stddev0/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/averages/mapflow/_averages0/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:30:40 | INFO | nipype.interface | Generating visual report
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 11.919874s.
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:30:54 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/stddev/mapflow/_stddev1/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b11e90e85c6d501b2e36123427f61f385161ff77/averages/mapflow/_averages1/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:30:54 | INFO | nipype.interface | Generating visual report
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.854885s.
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:31:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:31:08 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:31:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.079465s.
2025-10-09 22:31:10 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:31:10 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:31:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.126311s.
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:31:14 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:31:14 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:31:15 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 0.801736s.
2025-10-09 22:31:16 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:31:16 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:31:19 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 2.483484s.
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:31:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/measures".
2025-10-09 22:31:22 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:31:25 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 2.5019590000000003s.
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/datasink".
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000371s.
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:31:26 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/stddev/mapflow/_stddev0/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/averages/mapflow/_averages0/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:31:26 | INFO | nipype.interface | Generating visual report
2025-10-09 22:31:38 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 11.96449s.
2025-10-09 22:31:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:31:40 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:31:40 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/stddev/mapflow/_stddev1/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/averages/mapflow/_averages1/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:31:40 | INFO | nipype.interface | Generating visual report
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.885946s.
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:31:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.083742s.
2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:31:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.131216s.
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:32:00 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:32:00 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:32:01 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.0587010000000001s.
2025-10-09 22:32:02 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:32:02 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.430507s.
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:32:06 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:32:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/f0cd51d349e063f4a76aec20b6bed5be11acdb97/measures".
2025-10-09 22:32:08 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:32:12 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.509591s.
2025-10-09 22:32:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/f0cd51d349e063f4a76aec20b6bed5be11acdb97/datasink".
2025-10-09 22:32:12 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:32:12 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000464s.
2025-10-09 22:32:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:32:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:32:12 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/stddev/mapflow/_stddev0/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/averages/mapflow/_averages0/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:32:12 | INFO | nipype.interface | Generating visual report
2025-10-09 22:32:23 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 10.534394s.
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:32:24 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:32:24 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/stddev/mapflow/_stddev1/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/f0cd51d349e063f4a76aec20b6bed5be11acdb97/averages/mapflow/_averages1/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:32:24 | INFO | nipype.interface | Generating visual report
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.897687s.
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:32:36 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:32:38 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:32:39 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.08031s.
2025-10-09 22:32:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:32:40 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:32:41 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.130226s.
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:32:42 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:32:44 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:32:45 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.053854s.
2025-10-09 22:32:46 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:32:46 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.433779s.
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:32:50 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:32:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/78f42bb8d1fe1f92048140c9acf197b3a583a92b/measures".
2025-10-09 22:32:52 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.488611s.
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/78f42bb8d1fe1f92048140c9acf197b3a583a92b/datasink".
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000359s.
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:32:56 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:32:56 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/stddev/mapflow/_stddev0/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/averages/mapflow/_averages0/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:32:56 | INFO | nipype.interface | Generating visual report
2025-10-09 22:33:08 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 11.937288s.
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:33:10 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:33:10 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/stddev/mapflow/_stddev1/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/78f42bb8d1fe1f92048140c9acf197b3a583a92b/averages/mapflow/_averages1/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:33:10 | INFO | nipype.interface | Generating visual report
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 11.881313s.
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:33:22 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004046s.
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.00411s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004111s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004046s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004093s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003959s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004076s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004009s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004077s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004037s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004026s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004032s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003992s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004137s.
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003832s.
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003625s.
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003814s.
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b11e90e85c6d501b2e36123427f61f385161ff77/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003662s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003801s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003679s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003874s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2b8492b98080212ef38f37ed1ca8fcf76e4b9253/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003797s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003848s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003607s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003828s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f0cd51d349e063f4a76aec20b6bed5be11acdb97/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003672s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003838s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003653s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004065s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004036s.
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00398s.
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/78f42bb8d1fe1f92048140c9acf197b3a583a92b/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003675s.
2025-10-09 22:33:30 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:33:31 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:33:31 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 07min 11s per subject.
2025-10-09 22:33:31 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 35min 55s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/anat/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-108_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-211_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs066 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_2917413/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215735_4f0ff533-1ddd-45b2-8e03-825858cda3ff.toml (file)
add(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_info.json (file)
add(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_stderr (file)
add(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_stdout (file)
add(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_usage.json (file)
add(ok): logs/mriqc-20251009-215735_4f0ff533-1ddd-45b2-8e03-825858cda3ff.log (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-fa_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-md_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-fa_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-md_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-fa_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_desc-md_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-fa_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_desc-md_dwi.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs066/ses-s1Bx1/anat/sub-cIVs066_ses-s1Bx1_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi.json (file)
add(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi.json (file)
add(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi.json (file)
add(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi.json (file)
add(ok): sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi.html (file)
add(ok): sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi.html (file)
add(ok): sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi.html (file)
add(ok): sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi.html (file)
add(ok): sub-cIVs066_ses-s1Bx1_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215735_4f0ff533-1ddd-45b2-8e03-825858cda3ff.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs066_2025.10.09T23.57.35-2927773_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215735_4f0ff533-1ddd-45b2-8e03-825858cda3ff.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs066/figures/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi.json (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi.json (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi.json (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066/ses-s1Bx1/dwi/sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi.json (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-109_dwi.html (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-212_dwi.html (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-107_dwi.html (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-210_dwi.html (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs066_ses-s1Bx1_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000839 seconds
flock: executing git
SUCCESS