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ds003416-mriqc/logs/sub-cIVs058_10066454.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_3950040/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3950040/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3950040/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3950040/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:56:21 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:56:21 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:56:21 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:56:21 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:56:21 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:56:21 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215619_6eda8c77-4902-4ec2-88be-5b2bb2235a3e.toml.
2025-10-09 21:56:26 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:56:27 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:56:27 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:56:28 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:56:32 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:56:37 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/9ebc2380c4797ae493204c8172d2071ed8fb9b04/conform".
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.716641s.
2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/load_bmat".
2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.198291s.
2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/sanitize".
2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.024908s.
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8ae57dba804bf805767ef86c4c90d09df7292595/provenance".
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.048981s.
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/load_bmat".
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.025471s.
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/sanitize".
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.024598s.
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/provenance".
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.029062s.
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/load_bmat".
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.040732s.
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/sanitize".
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023744s.
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/provenance".
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.038481s.
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/load_bmat".
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02615s.
2025-10-09 21:56:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/sanitize".
2025-10-09 21:56:54 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:54 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023027s.
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/provenance".
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.035928s.
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/pre_clip".
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:57:07 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.542469s.
2025-10-09 21:57:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/9ebc2380c4797ae493204c8172d2071ed8fb9b04/RotationMask".
2025-10-09 21:57:08 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:57:09 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.205385s.
2025-10-09 21:57:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotMosaicNoise".
2025-10-09 21:57:10 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:57:15 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.2326s.
2025-10-09 21:57:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/shells".
2025-10-09 21:57:16 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:16 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000744s.
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/piesno".
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:18 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.92791s.
2025-10-09 21:57:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/shells".
2025-10-09 21:57:20 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:20 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000664s.
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/piesno".
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:22 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.935845s.
2025-10-09 21:57:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/shells".
2025-10-09 21:57:24 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:24 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00071s.
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/piesno".
2025-10-09 21:57:26 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:27 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.71654s.
2025-10-09 21:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/shells".
2025-10-09 21:57:28 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:57:28 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000717s.
2025-10-09 21:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/piesno".
2025-10-09 21:57:30 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:57:31 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.3057940000000001s.
2025-10-09 21:57:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/pre_n4".
2025-10-09 21:57:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 21:59:42 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 129.485121s.
2025-10-09 21:59:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_background".
2025-10-09 21:59:44 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 21:59:44 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008898s.
2025-10-09 21:59:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/dwi_ref".
2025-10-09 21:59:44 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:44 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.574985s.
2025-10-09 21:59:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/get_lowb".
2025-10-09 21:59:46 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:46 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.364069s.
2025-10-09 21:59:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/dwi_ref".
2025-10-09 21:59:48 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:48 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.555925s.
2025-10-09 21:59:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/get_lowb".
2025-10-09 21:59:50 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:50 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.355984s.
2025-10-09 21:59:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/dwi_ref".
2025-10-09 21:59:52 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:52 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.705936s.
2025-10-09 21:59:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/get_lowb".
2025-10-09 21:59:54 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:54 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.459249s.
2025-10-09 21:59:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/dwi_ref".
2025-10-09 21:59:56 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:56 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.752282s.
2025-10-09 21:59:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/get_lowb".
2025-10-09 21:59:58 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:58 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.495173s.
2025-10-09 22:00:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/synthstrip".
2025-10-09 22:00:00 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 100.331188s.
2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/pre_clip".
2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.737922s.
2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/SharpenEPI".
2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:52 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.229788s.
2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/hmc_b0".
2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:17 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.813546s.
2025-10-09 22:02:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/pre_clip".
2025-10-09 22:02:18 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:18 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.73594s.
2025-10-09 22:02:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/SharpenEPI".
2025-10-09 22:02:20 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.227119s.
2025-10-09 22:02:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/hmc_b0".
2025-10-09 22:02:30 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:53 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 23.016623s.
2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/pre_clip".
2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.700974s.
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/SharpenEPI".
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:04 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.091684s.
2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/hmc_b0".
2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:33 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.673919s.
2025-10-09 22:03:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/pre_clip".
2025-10-09 22:03:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.733184s.
2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/SharpenEPI".
2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:44 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.058012s.
2025-10-09 22:03:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/hmc_b0".
2025-10-09 22:03:46 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:12 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 26.74775s.
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/post_n4".
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 28.703199s.
2025-10-09 22:04:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9ebc2380c4797ae493204c8172d2071ed8fb9b04/smoothness".
2025-10-09 22:04:44 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:04:49 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.6212029999999995s.
2025-10-09 22:04:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotMosaicZoomed".
2025-10-09 22:04:50 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:04:55 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.161709s.
2025-10-09 22:04:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotBrainmask".
2025-10-09 22:04:56 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.849559s.
2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/pre_n4".
2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.020964s.
2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/pre_n4".
2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.035415s.
2025-10-09 22:05:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/pre_n4".
2025-10-09 22:05:22 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.920187s.
2025-10-09 22:05:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/pre_n4".
2025-10-09 22:05:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.97193s.
2025-10-09 22:05:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/final_masked".
2025-10-09 22:05:42 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:05:42 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.330221s.
2025-10-09 22:05:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization".
2025-10-09 22:05:44 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:05:45 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:07:06 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:07:06 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:07:06 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:07:25 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:07:27 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:07:27 | INFO | niworkflows | Generating visual report
2025-10-09 22:07:47 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 123.493141s.
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_zoomed".
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.00535s.
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_bmask".
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005252s.
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/synthstrip".
2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:08:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 45.992928s.
2025-10-09 22:08:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/synthstrip".
2025-10-09 22:08:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:23 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.20637s.
2025-10-09 22:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/synthstrip".
2025-10-09 22:09:24 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:13 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 49.135866s.
2025-10-09 22:10:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/synthstrip".
2025-10-09 22:10:14 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 51.746124s.
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_norm".
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005842s.
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/post_n4".
2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:11:09 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.8096170000000003s.
2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/sp_mask".
2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:11:11 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.81475s.
2025-10-09 22:11:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/drift".
2025-10-09 22:11:13 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:11:13 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0018, 0.9953, 1.0053, 1.0012, 1.0013, 0.9906.
2025-10-09 22:11:15 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.819931s.
2025-10-09 22:11:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/EPI2MNI".
2025-10-09 22:11:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:11:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:11:50 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/EPI2MNI/stderr.nipype-init).
2025-10-09 22:11:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:11:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:13:12 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:13:12 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:13:12 | INFO | niworkflows | Generating visual report
2025-10-09 22:13:31 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 134.288191s.
2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/post_n4".
2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:13:35 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.66967s.
2025-10-09 22:13:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/sp_mask".
2025-10-09 22:13:36 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:13:37 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.646048s.
2025-10-09 22:13:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/drift".
2025-10-09 22:13:38 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:13:38 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0001, 0.9974, 1.0038, 1.0025, 1.0001, 0.9827.
2025-10-09 22:13:40 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.6991s.
2025-10-09 22:13:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/EPI2MNI".
2025-10-09 22:13:40 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:13:40 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:14:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:14:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:15:28 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:15:28 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:15:28 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:46 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 125.958859s.
2025-10-09 22:15:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/post_n4".
2025-10-09 22:15:48 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:15:51 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.562173s.
2025-10-09 22:15:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/sp_mask".
2025-10-09 22:15:52 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:15:53 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.918966s.
2025-10-09 22:15:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/drift".
2025-10-09 22:15:54 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:15:55 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0019, 0.9978, 1.0006, 1.002, 1.0019, 0.995, 0.9992, 0.9884.
2025-10-09 22:15:56 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.149266s.
2025-10-09 22:15:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/EPI2MNI".
2025-10-09 22:15:58 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:15:58 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:16:32 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:16:32 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:17:47 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:17:47 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:17:47 | INFO | niworkflows | Generating visual report
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 127.440736s.
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/post_n4".
2025-10-09 22:18:06 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:18:09 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.626666s.
2025-10-09 22:18:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/sp_mask".
2025-10-09 22:18:10 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:18:11 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.943868s.
2025-10-09 22:18:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/drift".
2025-10-09 22:18:12 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:18:13 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0014, 1.0004, 1.0063, 1.0029, 0.9985, 0.9973, 1.0016, 0.9897.
2025-10-09 22:18:15 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.219592s.
2025-10-09 22:18:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/EPI2MNI".
2025-10-09 22:18:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:18:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:18:50 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/EPI2MNI/stderr.nipype-init).
2025-10-09 22:18:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:18:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/SharpenEPI/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:20:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:20:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:20:08 | INFO | niworkflows | Generating visual report
2025-10-09 22:20:27 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 130.933762s.
2025-10-09 22:20:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8ae57dba804bf805767ef86c4c90d09df7292595/final_masked".
2025-10-09 22:20:29 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:20:29 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039702s.
2025-10-09 22:20:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/dwidenoise".
2025-10-09 22:20:31 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:20:54 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 23.734212s.
2025-10-09 22:20:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8ae57dba804bf805767ef86c4c90d09df7292595/ResampleSegmentation".
2025-10-09 22:20:55 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:20:59 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.347144s.
2025-10-09 22:21:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/final_masked".
2025-10-09 22:21:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039682s.
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/dwidenoise".
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:21:27 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.263185s.
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ResampleSegmentation".
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:21:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.43899s.
2025-10-09 22:21:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/final_masked".
2025-10-09 22:21:35 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:35 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038885s.
2025-10-09 22:21:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/dwidenoise".
2025-10-09 22:21:37 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:20 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.240987s.
2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ResampleSegmentation".
2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.414284s.
2025-10-09 22:22:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/final_masked".
2025-10-09 22:22:27 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:27 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.0376s.
2025-10-09 22:22:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/dwidenoise".
2025-10-09 22:22:29 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:12 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.260029s.
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ResampleSegmentation".
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.354698s.
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/dwimodel".
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:23 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.470835s.
2025-10-09 22:23:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8ae57dba804bf805767ef86c4c90d09df7292595/estimate_sigma".
2025-10-09 22:23:25 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:25 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042613s.
2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/get_wm".
2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041763s.
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/dwimodel".
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:33 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.465964s.
2025-10-09 22:23:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/estimate_sigma".
2025-10-09 22:23:35 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:35 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043366s.
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/get_wm".
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.04073s.
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/dwimodel".
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:43 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.85786s.
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/estimate_sigma".
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042963s.
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/get_wm".
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.03926s.
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/dwimodel".
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:53 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.704s.
2025-10-09 22:23:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/estimate_sigma".
2025-10-09 22:23:55 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:55 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042194s.
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/get_wm".
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038631s.
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/cc_mask".
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.705174s.
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_fa".
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.5642070000000001s.
2025-10-09 22:24:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_md".
2025-10-09 22:24:03 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.848954s.
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/plot_heatmap".
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:06 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.365038s.
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/cc_mask".
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.59483s.
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_fa".
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:10 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.818106s.
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_md".
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.996476s.
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/plot_heatmap".
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:16 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.409312s.
2025-10-09 22:24:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/cc_mask".
2025-10-09 22:24:17 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:17 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.615309s.
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_fa".
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 2.000796s.
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_md".
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.9282439999999998s.
2025-10-09 22:24:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/plot_heatmap".
2025-10-09 22:24:27 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:28 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.422228s.
2025-10-09 22:24:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/cc_mask".
2025-10-09 22:24:29 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:29 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.60401s.
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_fa".
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:32 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.798929s.
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_md".
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:34 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.877562s.
2025-10-09 22:24:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/plot_heatmap".
2025-10-09 22:24:37 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:38 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.508278s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_fa".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005634s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_md".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005668s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_hm".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005732s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_fa".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005582s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_md".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.006219s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_hm".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.006473s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_fa".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.006325s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_md".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.006287s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_hm".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.0056s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_fa".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.006811s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_md".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005971s.
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_hm".
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.006065s.
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:24:51 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 10.360257s.
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:03 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 10.430146s.
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 10.286712s.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/9ebc2380c4797ae493204c8172d2071ed8fb9b04/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9ebc2380c4797ae493204c8172d2071ed8fb9b04/Enhance".
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.77527s.
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/9ebc2380c4797ae493204c8172d2071ed8fb9b04/format_tpm_names".
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.081526s.
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9ebc2380c4797ae493204c8172d2071ed8fb9b04/Grad".
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.368214s.
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9ebc2380c4797ae493204c8172d2071ed8fb9b04/apply_mask".
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.341646s.
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/9ebc2380c4797ae493204c8172d2071ed8fb9b04/GradientThreshold".
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:51 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.838393s.
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/9ebc2380c4797ae493204c8172d2071ed8fb9b04/segmentation".
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 107.670174s.
2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ArtifactMask".
2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:27:48 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 7.347542s.
2025-10-09 22:27:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotHeadmask".
2025-10-09 22:27:49 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:27:53 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.546658s.
2025-10-09 22:27:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9ebc2380c4797ae493204c8172d2071ed8fb9b04/harmonize".
2025-10-09 22:27:53 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:27:54 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.394029s.
2025-10-09 22:27:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotSegmentation".
2025-10-09 22:27:55 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:27:59 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 4.082261s.
2025-10-09 22:28:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9ebc2380c4797ae493204c8172d2071ed8fb9b04/provenance".
2025-10-09 22:28:01 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:28:01 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.083682s.
2025-10-09 22:28:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ComputeQI2".
2025-10-09 22:28:01 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.704108s.
2025-10-09 22:28:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotAirmask".
2025-10-09 22:28:17 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:20 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.475084s.
2025-10-09 22:28:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/PlotArtmask".
2025-10-09 22:28:21 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:24 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.491922s.
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_headmask".
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.005188s.
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9ebc2380c4797ae493204c8172d2071ed8fb9b04/measures".
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:28:29 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=3.096)
2025-10-09 22:28:29 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=3.096)
2025-10-09 22:28:29 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=3.096)
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.503888s.
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_segm".
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.005352s.
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_noisefit".
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005101s.
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_airmask".
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:37 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.005213s.
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/9ebc2380c4797ae493204c8172d2071ed8fb9b04/ds_report_artmask".
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.005173s.
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/9ebc2380c4797ae493204c8172d2071ed8fb9b04/datasink".
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000777s.
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/averages/mapflow/_averages0".
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:28:38 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.366425s.
2025-10-09 22:28:39 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/averages/mapflow/_averages1".
2025-10-09 22:28:39 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:28:39 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.355103s.
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/averages/mapflow/_averages0".
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/averages/mapflow/_averages1".
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:28:41 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8ae57dba804bf805767ef86c4c90d09df7292595/motion_correct".
2025-10-09 22:28:43 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:31:34 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 170.905027s.
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8ae57dba804bf805767ef86c4c90d09df7292595/ComputeFD".
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001241s.
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/8ae57dba804bf805767ef86c4c90d09df7292595/bvec_rot".
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018488s.
2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/stddev/mapflow/_stddev0".
2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:40 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.440295s.
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/stddev/mapflow/_stddev1".
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:42 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.427842s.
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/stddev/mapflow/_stddev0".
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/stddev/mapflow/_stddev1".
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:31:45 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/averages/mapflow/_averages0".
2025-10-09 22:31:45 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:45 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.318344s.
2025-10-09 22:31:47 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/averages/mapflow/_averages1".
2025-10-09 22:31:47 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:47 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.323582s.
2025-10-09 22:31:49 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/averages/mapflow/_averages0".
2025-10-09 22:31:49 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:31:49 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:31:49 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/averages/mapflow/_averages1".
2025-10-09 22:31:49 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:31:49 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:31:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/motion_correct".
2025-10-09 22:31:51 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:34:38 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 167.188223s.
2025-10-09 22:34:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ComputeFD".
2025-10-09 22:34:39 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:34:39 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001187s.
2025-10-09 22:34:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/bvec_rot".
2025-10-09 22:34:41 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:34:41 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018487s.
2025-10-09 22:34:43 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/stddev/mapflow/_stddev0".
2025-10-09 22:34:43 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:44 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.442741s.
2025-10-09 22:34:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/stddev/mapflow/_stddev1".
2025-10-09 22:34:45 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:46 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.436691s.
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/stddev/mapflow/_stddev0".
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/stddev/mapflow/_stddev1".
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:34:47 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:34:49 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/averages/mapflow/_averages0".
2025-10-09 22:34:49 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:50 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.396532s.
2025-10-09 22:34:51 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/averages/mapflow/_averages1".
2025-10-09 22:34:51 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:52 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.429725s.
2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/averages/mapflow/_averages0".
2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/averages/mapflow/_averages1".
2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:34:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/motion_correct".
2025-10-09 22:34:55 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 221.288966s.
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ComputeFD".
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001364s.
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/bvec_rot".
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020958s.
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/stddev/mapflow/_stddev0".
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.575715s.
2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/stddev/mapflow/_stddev1".
2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.569664s.
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/stddev/mapflow/_stddev0".
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/stddev/mapflow/_stddev1".
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/averages/mapflow/_averages0".
2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.448612s.
2025-10-09 22:38:49 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/averages/mapflow/_averages1".
2025-10-09 22:38:49 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.439203s.
2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/averages/mapflow/_averages0".
2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/averages/mapflow/_averages1".
2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:38:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/motion_correct".
2025-10-09 22:38:53 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:40 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 226.927128s.
2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ComputeFD".
2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005401s.
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/bvec_rot".
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020972s.
2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/stddev/mapflow/_stddev0".
2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:46 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.599965s.
2025-10-09 22:42:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/stddev/mapflow/_stddev1".
2025-10-09 22:42:47 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:48 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.595922s.
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/stddev/mapflow/_stddev0".
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/stddev/mapflow/_stddev1".
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:42:51 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:42:51 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:42:53 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.5564390000000001s.
2025-10-09 22:42:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:42:53 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.561867s.
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.1691989999999999s.
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.628467s.
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:43:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8ae57dba804bf805767ef86c4c90d09df7292595/measures".
2025-10-09 22:43:05 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:43:09 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.054503s.
2025-10-09 22:43:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8ae57dba804bf805767ef86c4c90d09df7292595/datasink".
2025-10-09 22:43:11 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:43:11 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000722s.
2025-10-09 22:43:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:43:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:43:12 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/stddev/mapflow/_stddev0/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/averages/mapflow/_averages0/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:43:12 | INFO | nipype.interface | Generating visual report
2025-10-09 22:43:29 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.85865s.
2025-10-09 22:43:31 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:43:31 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:43:31 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/stddev/mapflow/_stddev1/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/8ae57dba804bf805767ef86c4c90d09df7292595/averages/mapflow/_averages1/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:43:31 | INFO | nipype.interface | Generating visual report
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 20.229791s.
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.558017s.
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.7419820000000001s.
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:44:01 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:01 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:03 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.176124s.
2025-10-09 22:44:03 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:03 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.591072s.
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:44:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/measures".
2025-10-09 22:44:09 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:44:13 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.018504s.
2025-10-09 22:44:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/datasink".
2025-10-09 22:44:15 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:44:15 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000477s.
2025-10-09 22:44:16 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:16 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:16 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/stddev/mapflow/_stddev0/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/averages/mapflow/_averages0/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:16 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:33 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.716177s.
2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:35 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/stddev/mapflow/_stddev1/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/averages/mapflow/_averages1/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:35 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.970184s.
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.588901s.
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.6860469999999999s.
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.509341s.
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:12 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 5.041746s.
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/measures".
2025-10-09 22:45:16 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:21 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.751583s.
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/datasink".
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000612s.
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:22 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/stddev/mapflow/_stddev0/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/averages/mapflow/_averages0/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:22 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:42 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 20.00679s.
2025-10-09 22:45:43 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:43 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:43 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/stddev/mapflow/_stddev1/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/averages/mapflow/_averages1/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:43 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:04 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 20.321047s.
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:46:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:08 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.6280160000000001s.
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.7329620000000001s.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:13 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.563316s.
2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:20 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.990052s.
2025-10-09 22:46:22 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:22 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:22 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:22 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:22 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:22 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/measures".
2025-10-09 22:46:24 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:29 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.72704s.
2025-10-09 22:46:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/datasink".
2025-10-09 22:46:30 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:30 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000618s.
2025-10-09 22:46:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:30 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:30 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/stddev/mapflow/_stddev0/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/averages/mapflow/_averages0/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:30 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:49 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.796265s.
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:51 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/stddev/mapflow/_stddev1/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/averages/mapflow/_averages1/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:51 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:12 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 20.293897s.
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.011667s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.0051s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005055s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005286s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005265s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005003s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005211s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005408s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005196s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005118s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005034s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005271s.
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005034s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004967s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005154s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005073s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005078s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8ae57dba804bf805767ef86c4c90d09df7292595/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005173s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005101s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004991s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005259s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/69cda2ccb40189e1846a45dff6e38b8b2ce7d351/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005002s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005243s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005143s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005289s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/c8a55f9480f0f0b8a19eb5e2ce191ccfa84d69e2/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005017s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004998s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004997s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005204s.
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005486s.
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004836s.
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5aff2ecebe6c621a4c7b7d9d3c4574e4416efbed/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004497s.
2025-10-09 22:47:22 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:47:23 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:47:23 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 12s per subject.
2025-10-09 22:47:23 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 51min 03s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/anat/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs058 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_3950040/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215619_6eda8c77-4902-4ec2-88be-5b2bb2235a3e.toml (file)
add(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_info.json (file)
add(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_stderr (file)
add(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_stdout (file)
add(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_usage.json (file)
add(ok): logs/mriqc-20251009-215619_6eda8c77-4902-4ec2-88be-5b2bb2235a3e.log (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-md_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-fa_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-md_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-fa_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-md_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-fa_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-md_dwi.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs058/ses-s1Bx2/anat/sub-cIVs058_ses-s1Bx2_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.json (file)
add(ok): sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.json (file)
add(ok): sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.json (file)
add(ok): sub-cIVs058/ses-s1Bx2/dwi/sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.json (file)
add(ok): sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.html (file)
add(ok): sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.html (file)
add(ok): sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.html (file)
add(ok): sub-cIVs058_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.html (file)
add(ok): sub-cIVs058_ses-s1Bx2_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215619_6eda8c77-4902-4ec2-88be-5b2bb2235a3e.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs058_2025.10.09T23.56.18-4072183_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215619_6eda8c77-4902-4ec2-88be-5b2bb2235a3e.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs058/figures/sub-cIVs058_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
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action summary:
copy (ok: 53)
flock: getting lock took 0.058287 seconds
flock: executing git
SUCCESS
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