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ds003416-mriqc/logs/sub-cIVs049_10066443.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_470423/ds (dataset)
install(ok): /var/lib/condor/execute/dir_470423/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_470423/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_470423/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:57:22 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:57:22 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:22 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:57:22 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:57:22 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:22 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215720_032c126d-96d2-4c7d-a874-2a600dfb7560.toml.
2025-10-09 21:57:27 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:57:29 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:57:29 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:57:30 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:57:34 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:57:39 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:57:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/conform".
2025-10-09 21:57:39 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:57:40 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.728583s.
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/load_bmat".
2025-10-09 21:57:41 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:42 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.204036s.
2025-10-09 21:57:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/sanitize".
2025-10-09 21:57:43 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:44 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.829077s.
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/provenance".
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.02028s.
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/load_bmat".
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:45 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02646s.
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/sanitize".
2025-10-09 21:57:47 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:48 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.833611s.
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/77091c892aec8511b766a807e9cf2eef88b21f8e/provenance".
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020184s.
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/load_bmat".
2025-10-09 21:57:49 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:50 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.036124s.
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/sanitize".
2025-10-09 21:57:51 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.076644s.
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a199e12e6adca80c5cd2810113ffc81f9c73a30f/provenance".
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025781s.
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/load_bmat".
2025-10-09 21:57:53 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02807s.
2025-10-09 21:57:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/sanitize".
2025-10-09 21:57:55 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.048854s.
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/01b2e5542da77e5ec09c41330b250afb9ed5be86/provenance".
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.024644s.
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/pre_clip".
2025-10-09 21:57:57 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.230189s.
2025-10-09 21:58:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/RotationMask".
2025-10-09 21:58:09 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.852802s.
2025-10-09 21:58:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotMosaicNoise".
2025-10-09 21:58:11 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.119679s.
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/shells".
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:17 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000705s.
2025-10-09 21:58:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/piesno".
2025-10-09 21:58:19 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.017967s.
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/shells".
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:21 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000679s.
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/piesno".
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 4.296085s.
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/shells".
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:29 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000711s.
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/piesno".
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.28963s.
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/shells".
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00071s.
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/piesno".
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.5672519999999999s.
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/pre_n4".
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 134.812164s.
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_background".
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:00:53 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009562s.
2025-10-09 22:00:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/dwi_ref".
2025-10-09 22:00:54 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:54 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.567693s.
2025-10-09 22:00:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/get_lowb".
2025-10-09 22:00:55 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:00:56 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.385646s.
2025-10-09 22:00:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/dwi_ref".
2025-10-09 22:00:57 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:00:58 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.595719s.
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/get_lowb".
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:00 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.353558s.
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/dwi_ref".
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:02 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.757791s.
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/get_lowb".
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:04 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 1.086755s.
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/dwi_ref".
2025-10-09 22:01:05 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:06 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.691088s.
2025-10-09 22:01:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/get_lowb".
2025-10-09 22:01:07 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:09 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 1.286568s.
2025-10-09 22:01:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/synthstrip".
2025-10-09 22:01:09 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 104.367283s.
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/pre_clip".
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.657294s.
2025-10-09 22:02:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/SharpenEPI".
2025-10-09 22:02:57 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.07517s.
2025-10-09 22:03:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/hmc_b0".
2025-10-09 22:03:07 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.467176s.
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/pre_clip".
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.667201s.
2025-10-09 22:03:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/SharpenEPI".
2025-10-09 22:03:31 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.898912s.
2025-10-09 22:03:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/hmc_b0".
2025-10-09 22:03:41 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.768309s.
2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/pre_clip".
2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.644534s.
2025-10-09 22:04:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/SharpenEPI".
2025-10-09 22:04:05 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:13 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.020467s.
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/hmc_b0".
2025-10-09 22:04:15 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:44 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.243498s.
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/pre_clip".
2025-10-09 22:04:45 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:46 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.689163s.
2025-10-09 22:04:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/SharpenEPI".
2025-10-09 22:04:47 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:55 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.956208s.
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/hmc_b0".
2025-10-09 22:04:57 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:25 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.482143s.
2025-10-09 22:05:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/post_n4".
2025-10-09 22:05:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 30.213937s.
2025-10-09 22:05:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/smoothness".
2025-10-09 22:05:57 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:06:03 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.7703050000000005s.
2025-10-09 22:06:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotMosaicZoomed".
2025-10-09 22:06:03 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:06:09 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.552283s.
2025-10-09 22:06:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotBrainmask".
2025-10-09 22:06:09 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:06:14 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.407051s.
2025-10-09 22:06:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/pre_n4".
2025-10-09 22:06:15 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:24 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.087735s.
2025-10-09 22:06:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/pre_n4".
2025-10-09 22:06:25 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:34 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.262648s.
2025-10-09 22:06:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/pre_n4".
2025-10-09 22:06:35 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.794839s.
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/pre_n4".
2025-10-09 22:06:43 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.938098s.
2025-10-09 22:06:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/final_masked".
2025-10-09 22:06:53 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:06:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.332366s.
2025-10-09 22:06:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization".
2025-10-09 22:06:56 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:06:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:08:20 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:08:20 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:08:20 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:08:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:08:41 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:08:41 | INFO | niworkflows | Generating visual report
2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 126.658781s.
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_zoomed".
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.008652s.
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_bmask".
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005266s.
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/synthstrip".
2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:58 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 53.589673s.
2025-10-09 22:10:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/synthstrip".
2025-10-09 22:10:00 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:56 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 56.102501s.
2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/synthstrip".
2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:52 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 54.460229s.
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/synthstrip".
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 53.183893s.
2025-10-09 22:12:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_norm".
2025-10-09 22:12:48 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:12:48 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005472s.
2025-10-09 22:12:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/post_n4".
2025-10-09 22:12:48 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:12:51 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.733911s.
2025-10-09 22:12:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/sp_mask".
2025-10-09 22:12:52 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:12:52 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.627692s.
2025-10-09 22:12:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/drift".
2025-10-09 22:12:54 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:12:54 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0037, 1.0014, 0.9965, 1.0045, 1.0007, 0.9929.
2025-10-09 22:12:55 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.7284950000000001s.
2025-10-09 22:12:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/EPI2MNI".
2025-10-09 22:12:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:12:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:13:29 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/EPI2MNI/stderr.nipype-init).
2025-10-09 22:13:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:13:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:14:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:14:43 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:14:43 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:01 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 125.811025s.
2025-10-09 22:15:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/post_n4".
2025-10-09 22:15:02 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:15:04 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.604773s.
2025-10-09 22:15:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/sp_mask".
2025-10-09 22:15:06 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:15:06 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.658469s.
2025-10-09 22:15:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/drift".
2025-10-09 22:15:08 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:15:08 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0016, 1.0009, 0.9985, 1.0014, 1.002, 0.9965.
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.6604079999999999s.
2025-10-09 22:15:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/EPI2MNI".
2025-10-09 22:15:10 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:15:10 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:15:43 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/EPI2MNI/stderr.nipype-init).
2025-10-09 22:15:43 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:15:43 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:16:54 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:16:54 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:16:54 | INFO | niworkflows | Generating visual report
2025-10-09 22:17:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 123.330969s.
2025-10-09 22:17:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/post_n4".
2025-10-09 22:17:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:17:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.6421900000000003s.
2025-10-09 22:17:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/sp_mask".
2025-10-09 22:17:18 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:17:19 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.925445s.
2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/drift".
2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:17:20 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.001, 1.0022, 1.0003, 1.0003, 0.9998, 1.0014, 0.994, 0.9949.
2025-10-09 22:17:22 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.136418s.
2025-10-09 22:17:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/EPI2MNI".
2025-10-09 22:17:24 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:17:24 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:17:58 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/EPI2MNI/stderr.nipype-init).
2025-10-09 22:17:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:17:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:19:15 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:19:15 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:19:15 | INFO | niworkflows | Generating visual report
2025-10-09 22:19:35 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 131.173282s.
2025-10-09 22:19:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/post_n4".
2025-10-09 22:19:36 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:19:39 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.814916s.
2025-10-09 22:19:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/sp_mask".
2025-10-09 22:19:40 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:19:41 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.983026s.
2025-10-09 22:19:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/drift".
2025-10-09 22:19:42 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:19:42 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0026, 1.003, 0.9969, 1.002, 1.0027, 0.9962, 0.992, 0.9965.
2025-10-09 22:19:44 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.2018240000000002s.
2025-10-09 22:19:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/EPI2MNI".
2025-10-09 22:19:46 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:19:46 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:20:22 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:20:22 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/SharpenEPI/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:21:41 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:21:41 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:21:41 | INFO | niworkflows | Generating visual report
2025-10-09 22:22:01 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 135.223106s.
2025-10-09 22:22:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/final_masked".
2025-10-09 22:22:02 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:02 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.04931s.
2025-10-09 22:22:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/dwidenoise".
2025-10-09 22:22:04 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:28 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.163266s.
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ResampleSegmentation".
2025-10-09 22:22:30 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:35 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.564874s.
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/final_masked".
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.070727s.
2025-10-09 22:22:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/dwidenoise".
2025-10-09 22:22:38 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:02 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.401465s.
2025-10-09 22:23:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/77091c892aec8511b766a807e9cf2eef88b21f8e/ResampleSegmentation".
2025-10-09 22:23:04 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:08 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.343389s.
2025-10-09 22:23:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/final_masked".
2025-10-09 22:23:10 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:10 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037821s.
2025-10-09 22:23:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/dwidenoise".
2025-10-09 22:23:12 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:55 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.510722s.
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ResampleSegmentation".
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:00 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.079486s.
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/final_masked".
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039464s.
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/dwidenoise".
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 43.608631s.
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/01b2e5542da77e5ec09c41330b250afb9ed5be86/ResampleSegmentation".
2025-10-09 22:24:48 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:52 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.28415s.
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/dwimodel".
2025-10-09 22:24:54 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:24:58 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.462962s.
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/estimate_sigma".
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043408s.
2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/get_wm".
2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041889s.
2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/dwimodel".
2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:08 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.416438s.
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/77091c892aec8511b766a807e9cf2eef88b21f8e/estimate_sigma".
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043847s.
2025-10-09 22:25:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/get_wm".
2025-10-09 22:25:12 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:12 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041824s.
2025-10-09 22:25:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/dwimodel".
2025-10-09 22:25:14 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.837573s.
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a199e12e6adca80c5cd2810113ffc81f9c73a30f/estimate_sigma".
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043078s.
2025-10-09 22:25:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/get_wm".
2025-10-09 22:25:22 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:22 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041585s.
2025-10-09 22:25:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/dwimodel".
2025-10-09 22:25:24 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:29 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.833318s.
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/01b2e5542da77e5ec09c41330b250afb9ed5be86/estimate_sigma".
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.04286s.
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/get_wm".
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.04074s.
2025-10-09 22:25:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/cc_mask".
2025-10-09 22:25:34 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.625292s.
2025-10-09 22:25:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_fa".
2025-10-09 22:25:36 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:37 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.470094s.
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_md".
2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:40 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.947184s.
2025-10-09 22:25:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/plot_heatmap".
2025-10-09 22:25:42 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.399724s.
2025-10-09 22:25:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/cc_mask".
2025-10-09 22:25:44 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:45 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.609373s.
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_fa".
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.7725360000000001s.
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_md".
2025-10-09 22:25:48 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:50 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.909128s.
2025-10-09 22:25:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/plot_heatmap".
2025-10-09 22:25:52 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.320843s.
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/cc_mask".
2025-10-09 22:25:54 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:55 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.593515s.
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_fa".
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.786759s.
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_md".
2025-10-09 22:25:58 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.7886069999999998s.
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/plot_heatmap".
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:01 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.406231s.
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/cc_mask".
2025-10-09 22:26:02 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.576729s.
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_fa".
2025-10-09 22:26:04 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.7248109999999999s.
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_md".
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.980021s.
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/plot_heatmap".
2025-10-09 22:26:10 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.39868s.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_fa".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005897s.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_md".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005457s.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_hm".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005588s.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_fa".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005463s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_md".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.00543s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_hm".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005368s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_fa".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.00536s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_md".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005414s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_hm".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005206s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_fa".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005193s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_md".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005203s.
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_hm".
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005406s.
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 10.685295s.
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:37 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 10.526507s.
2025-10-09 22:26:38 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:38 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:49 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 10.532993s.
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:26:50 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/Enhance".
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:53 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.69031s.
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/format_tpm_names".
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.143998s.
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/Grad".
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:05 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.289819s.
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/apply_mask".
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.332051s.
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/GradientThreshold".
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 15.863205s.
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/segmentation".
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:29:13 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 108.698131s.
2025-10-09 22:29:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ArtifactMask".
2025-10-09 22:29:14 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.953196s.
2025-10-09 22:29:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotHeadmask".
2025-10-09 22:29:22 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:26 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.481707s.
2025-10-09 22:29:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/harmonize".
2025-10-09 22:29:26 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:29:28 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.574408s.
2025-10-09 22:29:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotSegmentation".
2025-10-09 22:29:28 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:32 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.933933s.
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/provenance".
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.081663s.
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ComputeQI2".
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:29:45 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.974019s.
2025-10-09 22:29:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotAirmask".
2025-10-09 22:29:46 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:50 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.546633s.
2025-10-09 22:29:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/PlotArtmask".
2025-10-09 22:29:50 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:53 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.330462s.
2025-10-09 22:29:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_headmask".
2025-10-09 22:29:54 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:54 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.005195s.
2025-10-09 22:29:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/measures".
2025-10-09 22:29:54 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:29:58 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1404)
2025-10-09 22:29:58 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1404)
2025-10-09 22:29:58 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1404)
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.269899s.
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_segm".
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.00519s.
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_noisefit".
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004887s.
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_airmask".
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004733s.
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/ds_report_artmask".
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004931s.
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/90c34b3fcc02dfa49fa32e07ef8dd02ad8444416/datasink".
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000569s.
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/averages/mapflow/_averages0".
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.303134s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/averages/mapflow/_averages1".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.348204s.
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/averages/mapflow/_averages0".
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/averages/mapflow/_averages1".
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/motion_correct".
2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 221.857962s.
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ComputeFD".
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001359s.
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/bvec_rot".
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.01792s.
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/stddev/mapflow/_stddev0".
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.424877s.
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/stddev/mapflow/_stddev1".
2025-10-09 22:34:00 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:01 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.433955s.
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/stddev/mapflow/_stddev0".
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/stddev/mapflow/_stddev1".
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/averages/mapflow/_averages0".
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:05 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.320535s.
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/averages/mapflow/_averages1".
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:07 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.30608s.
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/averages/mapflow/_averages0".
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/averages/mapflow/_averages1".
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/77091c892aec8511b766a807e9cf2eef88b21f8e/motion_correct".
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:37:54 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 224.032736s.
2025-10-09 22:37:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/77091c892aec8511b766a807e9cf2eef88b21f8e/ComputeFD".
2025-10-09 22:37:56 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:37:56 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005317s.
2025-10-09 22:37:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/77091c892aec8511b766a807e9cf2eef88b21f8e/bvec_rot".
2025-10-09 22:37:58 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:37:58 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017552s.
2025-10-09 22:38:00 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/stddev/mapflow/_stddev0".
2025-10-09 22:38:00 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:01 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.436913s.
2025-10-09 22:38:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/stddev/mapflow/_stddev1".
2025-10-09 22:38:02 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:03 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.462379s.
2025-10-09 22:38:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/stddev/mapflow/_stddev0".
2025-10-09 22:38:04 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:38:04 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:38:04 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/stddev/mapflow/_stddev1".
2025-10-09 22:38:04 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:38:04 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:38:06 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/averages/mapflow/_averages0".
2025-10-09 22:38:06 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:07 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.430307s.
2025-10-09 22:38:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/averages/mapflow/_averages1".
2025-10-09 22:38:08 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:09 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.397438s.
2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/averages/mapflow/_averages0".
2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/averages/mapflow/_averages1".
2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:38:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/motion_correct".
2025-10-09 22:38:12 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 271.981711s.
2025-10-09 22:42:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ComputeFD".
2025-10-09 22:42:46 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:42:46 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005763s.
2025-10-09 22:42:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/bvec_rot".
2025-10-09 22:42:48 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020875s.
2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/stddev/mapflow/_stddev0".
2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:51 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.556703s.
2025-10-09 22:42:52 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/stddev/mapflow/_stddev1".
2025-10-09 22:42:52 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:53 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.549512s.
2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/stddev/mapflow/_stddev0".
2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/stddev/mapflow/_stddev1".
2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/averages/mapflow/_averages0".
2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.390502s.
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/averages/mapflow/_averages1".
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.420331s.
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/averages/mapflow/_averages0".
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/averages/mapflow/_averages1".
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/01b2e5542da77e5ec09c41330b250afb9ed5be86/motion_correct".
2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:26 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 263.624529s.
2025-10-09 22:47:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/01b2e5542da77e5ec09c41330b250afb9ed5be86/ComputeFD".
2025-10-09 22:47:27 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:47:27 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005557s.
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/01b2e5542da77e5ec09c41330b250afb9ed5be86/bvec_rot".
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020162s.
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/stddev/mapflow/_stddev0".
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.581387s.
2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/stddev/mapflow/_stddev1".
2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.607537s.
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/stddev/mapflow/_stddev0".
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/stddev/mapflow/_stddev1".
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:37 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:38 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.524365s.
2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:40 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.7050079999999999s.
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:44 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.093614s.
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.493137s.
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/measures".
2025-10-09 22:47:51 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:55 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.035234s.
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/datasink".
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000499s.
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:57 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/stddev/mapflow/_stddev0/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/averages/mapflow/_averages0/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:57 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:14 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.319726s.
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:15 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/stddev/mapflow/_stddev1/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/averages/mapflow/_averages1/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:15 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.777065s.
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:38 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.475103s.
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.501199s.
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:48:43 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:43 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:44 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.075806s.
2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.444857s.
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/77091c892aec8511b766a807e9cf2eef88b21f8e/measures".
2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.873362s.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/77091c892aec8511b766a807e9cf2eef88b21f8e/datasink".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000425s.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:57 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/stddev/mapflow/_stddev0/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/averages/mapflow/_averages0/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:57 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.434679s.
2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:15 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/stddev/mapflow/_stddev1/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/77091c892aec8511b766a807e9cf2eef88b21f8e/averages/mapflow/_averages1/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:15 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:31 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 16.022366s.
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.4536069999999999s.
2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.579513s.
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.419713s.
2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.532221s.
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:49:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a199e12e6adca80c5cd2810113ffc81f9c73a30f/measures".
2025-10-09 22:49:51 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.2832s.
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a199e12e6adca80c5cd2810113ffc81f9c73a30f/datasink".
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000458s.
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:57 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/stddev/mapflow/_stddev0/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/averages/mapflow/_averages0/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:57 | INFO | nipype.interface | Generating visual report
2025-10-09 22:50:15 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 18.659456s.
2025-10-09 22:50:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:50:17 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:50:17 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/stddev/mapflow/_stddev1/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/a199e12e6adca80c5cd2810113ffc81f9c73a30f/averages/mapflow/_averages1/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:50:17 | INFO | nipype.interface | Generating visual report
2025-10-09 22:50:35 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 17.98669s.
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.3764370000000001s.
2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:50:42 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.4261s.
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:50:46 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.405642s.
2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.447882s.
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/01b2e5542da77e5ec09c41330b250afb9ed5be86/measures".
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:51:00 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.258472s.
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/01b2e5542da77e5ec09c41330b250afb9ed5be86/datasink".
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000484s.
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:51:01 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/stddev/mapflow/_stddev0/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/averages/mapflow/_averages0/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:51:01 | INFO | nipype.interface | Generating visual report
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 15.550373s.
2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:51:17 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/stddev/mapflow/_stddev1/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/01b2e5542da77e5ec09c41330b250afb9ed5be86/averages/mapflow/_averages1/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:51:17 | INFO | nipype.interface | Generating visual report
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 17.747763s.
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005133s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005116s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005063s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005012s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004976s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004974s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004998s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005038s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00498s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005004s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004995s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005175s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00548s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004888s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004708s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004489s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004706s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/fa38d33ea15b7dd06b93ed53bf15fc9a78ea96da/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004504s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004838s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004853s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004777s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/77091c892aec8511b766a807e9cf2eef88b21f8e/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004586s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004744s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004453s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00482s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a199e12e6adca80c5cd2810113ffc81f9c73a30f/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004515s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004947s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004697s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005072s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005237s.
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004722s.
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/01b2e5542da77e5ec09c41330b250afb9ed5be86/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004554s.
2025-10-09 22:51:43 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:51:44 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:51:44 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 52s per subject.
2025-10-09 22:51:44 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 54min 23s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/anat/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-114_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs049 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_470423/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215720_032c126d-96d2-4c7d-a874-2a600dfb7560.toml (file)
add(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_info.json (file)
add(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_stderr (file)
add(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_stdout (file)
add(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_usage.json (file)
add(ok): logs/mriqc-20251009-215720_032c126d-96d2-4c7d-a874-2a600dfb7560.log (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-fa_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-md_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-fa_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-md_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-fa_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_desc-md_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-fa_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_desc-md_dwi.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs049/ses-s1Bx2/anat/sub-cIVs049_ses-s1Bx2_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi.json (file)
add(ok): sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi.json (file)
add(ok): sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi.json (file)
add(ok): sub-cIVs049/ses-s1Bx2/dwi/sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi.json (file)
add(ok): sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi.html (file)
add(ok): sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi.html (file)
add(ok): sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi.html (file)
add(ok): sub-cIVs049_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi.html (file)
add(ok): sub-cIVs049_ses-s1Bx2_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215720_032c126d-96d2-4c7d-a874-2a600dfb7560.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs049_2025.10.09T23.57.20-592613_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215720_032c126d-96d2-4c7d-a874-2a600dfb7560.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs049/figures/sub-cIVs049_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs049_ses-s1Bx2_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 56.576136 seconds
flock: executing git
SUCCESS
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