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ds003416-mriqc/logs/sub-cIVs041_10066450.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_3950021/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3950021/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3950021/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3950021/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:57:57 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:57:57 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:57 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:57:57 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:57:57 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:57:57 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215755_c4cf0f30-ae53-4e2b-af83-414c77957554.toml.
2025-10-09 21:58:02 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:58:03 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:58:03 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:58:04 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:58:09 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:58:14 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/bdf93a5605218d49d8d10da6b06a47713fcda49d/conform".
2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:58:15 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.763978s.
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/load_bmat".
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.192604s.
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/sanitize".
2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:19 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.851345s.
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/provenance".
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020281s.
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/load_bmat".
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02222s.
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/sanitize".
2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:23 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.808874s.
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/provenance".
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.019879s.
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/load_bmat".
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023537s.
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/sanitize".
2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:27 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.069467s.
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/38cdfee53c1b34c2613b38696a05c329cc6c46d2/provenance".
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.038049s.
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/load_bmat".
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.022812s.
2025-10-09 21:58:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/sanitize".
2025-10-09 21:58:30 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:31 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.09076s.
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/92fcff9bda81053c134a6e9f6c06b45040d35754/provenance".
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025792s.
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/pre_clip".
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:58:43 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.454815s.
2025-10-09 21:58:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/bdf93a5605218d49d8d10da6b06a47713fcda49d/RotationMask".
2025-10-09 21:58:44 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:58:45 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.101947s.
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotMosaicNoise".
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:58:51 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.268489s.
2025-10-09 21:58:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/shells".
2025-10-09 21:58:52 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:52 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000724s.
2025-10-09 21:58:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/piesno".
2025-10-09 21:58:54 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:55 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.1916120000000001s.
2025-10-09 21:58:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/shells".
2025-10-09 21:58:56 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:58:56 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000805s.
2025-10-09 21:58:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/piesno".
2025-10-09 21:58:58 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.687144s.
2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/shells".
2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000867s.
2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/piesno".
2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:03 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.39321s.
2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/shells".
2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000718s.
2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/piesno".
2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.310727s.
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/pre_n4".
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 137.076032s.
2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_background".
2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009314s.
2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/dwi_ref".
2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:27 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.640981s.
2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/get_lowb".
2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.448405s.
2025-10-09 22:01:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/dwi_ref".
2025-10-09 22:01:30 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:32 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.705555s.
2025-10-09 22:01:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/get_lowb".
2025-10-09 22:01:32 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:33 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.993168s.
2025-10-09 22:01:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/dwi_ref".
2025-10-09 22:01:34 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:36 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 2.152315s.
2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/get_lowb".
2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:39 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.703441s.
2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/dwi_ref".
2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:41 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.818776s.
2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/get_lowb".
2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.490344s.
2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/synthstrip".
2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:03:27 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 103.497534s.
2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/pre_clip".
2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.725264s.
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/SharpenEPI".
2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.040307s.
2025-10-09 22:03:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/hmc_b0".
2025-10-09 22:03:40 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.78842s.
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/pre_clip".
2025-10-09 22:04:02 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.683588s.
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/SharpenEPI".
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:12 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.876995s.
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/hmc_b0".
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.645595s.
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/pre_clip".
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.69943s.
2025-10-09 22:04:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/SharpenEPI".
2025-10-09 22:04:38 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:46 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.964682s.
2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/hmc_b0".
2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:16 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.57575s.
2025-10-09 22:05:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/pre_clip".
2025-10-09 22:05:16 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:05:17 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.741082s.
2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/SharpenEPI".
2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:26 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.9867799999999995s.
2025-10-09 22:05:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/hmc_b0".
2025-10-09 22:05:28 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.590026s.
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/post_n4".
2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:25 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 29.106533s.
2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bdf93a5605218d49d8d10da6b06a47713fcda49d/smoothness".
2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.610423s.
2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotMosaicZoomed".
2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:06:38 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.632973s.
2025-10-09 22:06:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotBrainmask".
2025-10-09 22:06:38 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:06:42 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.166079s.
2025-10-09 22:06:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/pre_n4".
2025-10-09 22:06:44 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:52 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.010158s.
2025-10-09 22:06:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/pre_n4".
2025-10-09 22:06:54 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.008975s.
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/pre_n4".
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:12 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.023011s.
2025-10-09 22:07:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/pre_n4".
2025-10-09 22:07:14 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:22 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.177491s.
2025-10-09 22:07:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/final_masked".
2025-10-09 22:07:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:07:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.369186s.
2025-10-09 22:07:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization".
2025-10-09 22:07:26 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:07:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:08:51 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:08:51 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:09:10 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:09:12 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:09:12 | INFO | niworkflows | Generating visual report
2025-10-09 22:09:33 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 127.144747s.
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_zoomed".
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005807s.
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_bmask".
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005943s.
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/synthstrip".
2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:46 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 71.409548s.
2025-10-09 22:10:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/synthstrip".
2025-10-09 22:10:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 66.73115s.
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/synthstrip".
2025-10-09 22:11:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:12:59 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 64.752963s.
2025-10-09 22:13:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/synthstrip".
2025-10-09 22:13:00 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:14:03 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 62.714914s.
2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_norm".
2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005219s.
2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/post_n4".
2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:14:07 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.6675269999999998s.
2025-10-09 22:14:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/sp_mask".
2025-10-09 22:14:08 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.672714s.
2025-10-09 22:14:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/drift".
2025-10-09 22:14:10 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:14:10 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9967, 0.996, 1.0014, 0.9985, 0.9914, 1.0015.
2025-10-09 22:14:12 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.6619410000000001s.
2025-10-09 22:14:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/EPI2MNI".
2025-10-09 22:14:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:14:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:14:43 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/EPI2MNI/stderr.nipype-init).
2025-10-09 22:14:43 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:14:43 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:16:00 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:16:00 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:16:00 | INFO | niworkflows | Generating visual report
2025-10-09 22:16:19 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.674534s.
2025-10-09 22:16:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/post_n4".
2025-10-09 22:16:20 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:16:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.628618s.
2025-10-09 22:16:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/sp_mask".
2025-10-09 22:16:24 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:16:25 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.663044s.
2025-10-09 22:16:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/drift".
2025-10-09 22:16:26 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:16:26 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0013, 1.0024, 1.0125, 1.006, 1.003, 0.9901.
2025-10-09 22:16:28 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.643723s.
2025-10-09 22:16:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/EPI2MNI".
2025-10-09 22:16:28 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:16:28 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:17:03 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:17:03 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:18:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:18:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:18:17 | INFO | niworkflows | Generating visual report
2025-10-09 22:18:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.674289s.
2025-10-09 22:18:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/post_n4".
2025-10-09 22:18:38 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:18:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.7696709999999998s.
2025-10-09 22:18:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/sp_mask".
2025-10-09 22:18:42 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:18:43 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.1243859999999999s.
2025-10-09 22:18:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/drift".
2025-10-09 22:18:44 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:18:45 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0009, 0.9973, 1.0018, 0.9976, 0.9951, 0.9897, 0.9945, 1.0039.
2025-10-09 22:18:46 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.149981s.
2025-10-09 22:18:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/EPI2MNI".
2025-10-09 22:18:48 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:18:48 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:19:25 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:19:25 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:20:45 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:20:45 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:20:45 | INFO | niworkflows | Generating visual report
2025-10-09 22:21:05 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 136.76377s.
2025-10-09 22:21:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/post_n4".
2025-10-09 22:21:06 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:21:09 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.788794s.
2025-10-09 22:21:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/sp_mask".
2025-10-09 22:21:10 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.027132s.
2025-10-09 22:21:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/drift".
2025-10-09 22:21:12 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:21:13 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0003, 0.9965, 0.9972, 0.9991, 0.9994, 0.9933, 0.9947, 1.0033.
2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.266899s.
2025-10-09 22:21:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/EPI2MNI".
2025-10-09 22:21:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:21:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:21:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:21:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/SharpenEPI/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:23:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:23:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:23:08 | INFO | niworkflows | Generating visual report
2025-10-09 22:23:28 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 131.672507s.
2025-10-09 22:23:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/final_masked".
2025-10-09 22:23:28 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:28 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.040392s.
2025-10-09 22:23:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/dwidenoise".
2025-10-09 22:23:30 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:55 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.309082s.
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ResampleSegmentation".
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.068777s.
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/final_masked".
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037011s.
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/dwidenoise".
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:24:28 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 23.571812s.
2025-10-09 22:24:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ResampleSegmentation".
2025-10-09 22:24:28 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.22581s.
2025-10-09 22:24:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/final_masked".
2025-10-09 22:24:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038137s.
2025-10-09 22:24:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/dwidenoise".
2025-10-09 22:24:36 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:25:18 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 41.927812s.
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ResampleSegmentation".
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:25:24 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.959324s.
2025-10-09 22:25:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/final_masked".
2025-10-09 22:25:26 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:25:26 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.036965s.
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/dwidenoise".
2025-10-09 22:25:28 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 42.71546s.
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/92fcff9bda81053c134a6e9f6c06b45040d35754/ResampleSegmentation".
2025-10-09 22:26:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:26:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.037737s.
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/dwimodel".
2025-10-09 22:26:18 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.245309s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/estimate_sigma".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.041547s.
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/get_wm".
2025-10-09 22:26:26 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:27 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.040412s.
2025-10-09 22:26:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/dwimodel".
2025-10-09 22:26:28 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:26:33 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.282053s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/estimate_sigma".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.044654s.
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/get_wm".
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:36 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.037622s.
2025-10-09 22:26:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/dwimodel".
2025-10-09 22:26:38 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:26:43 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.7155380000000005s.
2025-10-09 22:26:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/38cdfee53c1b34c2613b38696a05c329cc6c46d2/estimate_sigma".
2025-10-09 22:26:44 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:45 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.039812s.
2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/get_wm".
2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:47 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.042428s.
2025-10-09 22:26:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/dwimodel".
2025-10-09 22:26:48 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:26:53 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.820964s.
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/92fcff9bda81053c134a6e9f6c06b45040d35754/estimate_sigma".
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.06456s.
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/get_wm".
2025-10-09 22:26:56 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038865s.
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/cc_mask".
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.631002s.
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_fa".
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:02 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.5104410000000001s.
2025-10-09 22:27:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_md".
2025-10-09 22:27:02 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:05 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.113059s.
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/plot_heatmap".
2025-10-09 22:27:06 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.39471s.
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/cc_mask".
2025-10-09 22:27:08 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:27:09 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.582361s.
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_fa".
2025-10-09 22:27:10 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:12 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.7197s.
2025-10-09 22:27:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_md".
2025-10-09 22:27:13 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:15 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.9792070000000002s.
2025-10-09 22:27:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/plot_heatmap".
2025-10-09 22:27:16 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:27:18 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.366093s.
2025-10-09 22:27:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/cc_mask".
2025-10-09 22:27:18 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:27:19 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.611348s.
2025-10-09 22:27:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_fa".
2025-10-09 22:27:21 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.7614429999999999s.
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_md".
2025-10-09 22:27:22 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.756567s.
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/plot_heatmap".
2025-10-09 22:27:24 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:27:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.721359s.
2025-10-09 22:27:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/cc_mask".
2025-10-09 22:27:26 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:27:27 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.574842s.
2025-10-09 22:27:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_fa".
2025-10-09 22:27:28 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:30 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.593245s.
2025-10-09 22:27:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_md".
2025-10-09 22:27:31 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:27:32 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.9299819999999999s.
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/plot_heatmap".
2025-10-09 22:27:34 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.467694s.
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_fa".
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:36 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005715s.
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_md".
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.006146s.
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_hm".
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005871s.
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_fa".
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005796s.
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_md".
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005589s.
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_hm".
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005661s.
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_fa".
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005665s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_md".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005793s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_hm".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005349s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_fa".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.00548s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_md".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005329s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_hm".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005257s.
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:27:49 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 10.371537s.
2025-10-09 22:27:50 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:27:51 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:28:01 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 10.091739s.
2025-10-09 22:28:02 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:28:02 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:28:13 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 10.189638s.
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bdf93a5605218d49d8d10da6b06a47713fcda49d/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:28:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bdf93a5605218d49d8d10da6b06a47713fcda49d/Enhance".
2025-10-09 22:28:16 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:28:17 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.743622s.
2025-10-09 22:28:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/bdf93a5605218d49d8d10da6b06a47713fcda49d/format_tpm_names".
2025-10-09 22:28:19 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:28:21 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.117115s.
2025-10-09 22:28:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bdf93a5605218d49d8d10da6b06a47713fcda49d/Grad".
2025-10-09 22:28:22 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:28:30 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.47714s.
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bdf93a5605218d49d8d10da6b06a47713fcda49d/apply_mask".
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.36432s.
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bdf93a5605218d49d8d10da6b06a47713fcda49d/GradientThreshold".
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:28:49 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 16.210094s.
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/bdf93a5605218d49d8d10da6b06a47713fcda49d/segmentation".
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:30:37 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 106.289956s.
2025-10-09 22:30:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/bdf93a5605218d49d8d10da6b06a47713fcda49d/ArtifactMask".
2025-10-09 22:30:39 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:30:45 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.635825s.
2025-10-09 22:30:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotHeadmask".
2025-10-09 22:30:47 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:30:50 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.54306s.
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bdf93a5605218d49d8d10da6b06a47713fcda49d/harmonize".
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.418989s.
2025-10-09 22:30:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotSegmentation".
2025-10-09 22:30:53 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:30:56 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.839041s.
2025-10-09 22:30:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bdf93a5605218d49d8d10da6b06a47713fcda49d/provenance".
2025-10-09 22:30:57 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:30:57 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.070396s.
2025-10-09 22:30:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bdf93a5605218d49d8d10da6b06a47713fcda49d/ComputeQI2".
2025-10-09 22:30:57 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:31:10 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.038085s.
2025-10-09 22:31:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotAirmask".
2025-10-09 22:31:11 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:31:14 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.482871s.
2025-10-09 22:31:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/PlotArtmask".
2025-10-09 22:31:15 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:31:18 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.341987s.
2025-10-09 22:31:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_headmask".
2025-10-09 22:31:19 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:31:19 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.00541s.
2025-10-09 22:31:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bdf93a5605218d49d8d10da6b06a47713fcda49d/measures".
2025-10-09 22:31:19 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:31:23 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.8152)
2025-10-09 22:31:23 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.8152)
2025-10-09 22:31:23 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.8152)
2025-10-09 22:31:30 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.545599s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_segm".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.005273s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_noisefit".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005036s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_airmask".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.005045s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bdf93a5605218d49d8d10da6b06a47713fcda49d/ds_report_artmask".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004993s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bdf93a5605218d49d8d10da6b06a47713fcda49d/datasink".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000568s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/averages/mapflow/_averages0".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:32 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.317799s.
2025-10-09 22:31:33 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/averages/mapflow/_averages1".
2025-10-09 22:31:33 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:33 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.306462s.
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/averages/mapflow/_averages0".
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/averages/mapflow/_averages1".
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/motion_correct".
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:34:15 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 158.332245s.
2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ComputeFD".
2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004638s.
2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/bvec_rot".
2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017572s.
2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/stddev/mapflow/_stddev0".
2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.464023s.
2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/stddev/mapflow/_stddev1".
2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.425559s.
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/stddev/mapflow/_stddev0".
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/stddev/mapflow/_stddev1".
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:34:27 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/averages/mapflow/_averages0".
2025-10-09 22:34:27 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:27 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.305624s.
2025-10-09 22:34:29 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/averages/mapflow/_averages1".
2025-10-09 22:34:29 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:29 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.307028s.
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/averages/mapflow/_averages0".
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/averages/mapflow/_averages1".
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:34:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/motion_correct".
2025-10-09 22:34:33 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 168.890021s.
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ComputeFD".
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00123s.
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/bvec_rot".
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017467s.
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/stddev/mapflow/_stddev0".
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.425662s.
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/stddev/mapflow/_stddev1".
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.419383s.
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/stddev/mapflow/_stddev0".
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/stddev/mapflow/_stddev1".
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/averages/mapflow/_averages0".
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.395659s.
2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/averages/mapflow/_averages1".
2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.386939s.
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/averages/mapflow/_averages0".
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/averages/mapflow/_averages1".
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:37:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/motion_correct".
2025-10-09 22:37:39 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:36 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 236.967664s.
2025-10-09 22:41:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ComputeFD".
2025-10-09 22:41:37 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:41:37 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001407s.
2025-10-09 22:41:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/bvec_rot".
2025-10-09 22:41:39 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:41:39 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020494s.
2025-10-09 22:41:41 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/stddev/mapflow/_stddev0".
2025-10-09 22:41:41 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:41 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.59959s.
2025-10-09 22:41:43 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/stddev/mapflow/_stddev1".
2025-10-09 22:41:43 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:43 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.594415s.
2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/stddev/mapflow/_stddev0".
2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/stddev/mapflow/_stddev1".
2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:41:47 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/averages/mapflow/_averages0".
2025-10-09 22:41:47 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:47 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.39047s.
2025-10-09 22:41:49 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/averages/mapflow/_averages1".
2025-10-09 22:41:49 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:49 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.389844s.
2025-10-09 22:41:51 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/averages/mapflow/_averages0".
2025-10-09 22:41:51 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:41:51 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:41:51 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/averages/mapflow/_averages1".
2025-10-09 22:41:51 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:41:51 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:41:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/92fcff9bda81053c134a6e9f6c06b45040d35754/motion_correct".
2025-10-09 22:41:53 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:41 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 227.965466s.
2025-10-09 22:45:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/92fcff9bda81053c134a6e9f6c06b45040d35754/ComputeFD".
2025-10-09 22:45:41 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:45:41 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001374s.
2025-10-09 22:45:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/92fcff9bda81053c134a6e9f6c06b45040d35754/bvec_rot".
2025-10-09 22:45:43 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:45:43 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.02072s.
2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/stddev/mapflow/_stddev0".
2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.598494s.
2025-10-09 22:45:47 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/stddev/mapflow/_stddev1".
2025-10-09 22:45:47 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:45:48 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.590066s.
2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/stddev/mapflow/_stddev0".
2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/stddev/mapflow/_stddev1".
2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:45:51 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:51 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.5141339999999999s.
2025-10-09 22:45:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:53 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.608803s.
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.163557s.
2025-10-09 22:45:59 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:59 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.547371s.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/measures".
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:09 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.089007s.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/datasink".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000519s.
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:11 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/stddev/mapflow/_stddev0/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/averages/mapflow/_averages0/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:11 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:31 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.744252s.
2025-10-09 22:46:33 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:33 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:33 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/stddev/mapflow/_stddev1/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/averages/mapflow/_averages1/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:33 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 16.883683s.
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:46:51 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:46:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:53 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:54 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.443168s.
2025-10-09 22:46:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:55 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.653222s.
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:57 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.100992s.
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.534679s.
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/measures".
2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.080519s.
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/datasink".
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000486s.
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:13 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/stddev/mapflow/_stddev0/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/averages/mapflow/_averages0/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:13 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.577521s.
2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:33 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/stddev/mapflow/_stddev1/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/averages/mapflow/_averages1/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:33 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:52 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.055449s.
2025-10-09 22:47:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:53 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:47:53 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:47:53 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:53 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:47:53 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:55 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:55 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:56 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.452596s.
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.6265260000000001s.
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:48:01 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:01 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.408689s.
2025-10-09 22:48:03 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:03 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.6763580000000005s.
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/38cdfee53c1b34c2613b38696a05c329cc6c46d2/measures".
2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:48:16 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.341479s.
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/38cdfee53c1b34c2613b38696a05c329cc6c46d2/datasink".
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000524s.
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:17 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/stddev/mapflow/_stddev0/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/averages/mapflow/_averages0/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:17 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:36 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.055568s.
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:37 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/stddev/mapflow/_stddev1/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/38cdfee53c1b34c2613b38696a05c329cc6c46d2/averages/mapflow/_averages1/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:37 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.718412s.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:59 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:00 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.401623s.
2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.506853s.
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.410647s.
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.606988s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/92fcff9bda81053c134a6e9f6c06b45040d35754/measures".
2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.455039s.
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/92fcff9bda81053c134a6e9f6c06b45040d35754/datasink".
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000483s.
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:21 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/stddev/mapflow/_stddev0/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/averages/mapflow/_averages0/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:21 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.319219s.
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:39 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/stddev/mapflow/_stddev1/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/92fcff9bda81053c134a6e9f6c06b45040d35754/averages/mapflow/_averages1/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:39 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 18.085474s.
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004935s.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004991s.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005388s.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004817s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004853s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004832s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004849s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004849s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004785s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004882s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004945s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004812s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004806s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004666s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004465s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004573s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9ee889a4a1d0bdac744a0c16af0cfa67ea7349fc/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004316s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004599s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004279s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004638s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a6849d1fb09180d6ee43a071fed83bd70c7d64cb/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004364s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004735s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004369s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004659s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/38cdfee53c1b34c2613b38696a05c329cc6c46d2/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004303s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004699s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004484s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004958s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004818s.
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004604s.
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/92fcff9bda81053c134a6e9f6c06b45040d35754/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004334s.
2025-10-09 22:50:07 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:50:08 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:50:08 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 26s per subject.
2025-10-09 22:50:08 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 52min 13s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/anat/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-115_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-219_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs041 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_3950021/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215755_c4cf0f30-ae53-4e2b-af83-414c77957554.toml (file)
add(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_info.json (file)
add(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_stderr (file)
add(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_stdout (file)
add(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_usage.json (file)
add(ok): logs/mriqc-20251009-215755_c4cf0f30-ae53-4e2b-af83-414c77957554.log (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-fa_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-md_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-fa_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-md_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-fa_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_desc-md_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-fa_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_desc-md_dwi.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs041/ses-s1Bx2/anat/sub-cIVs041_ses-s1Bx2_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi.json (file)
add(ok): sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi.json (file)
add(ok): sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi.json (file)
add(ok): sub-cIVs041/ses-s1Bx2/dwi/sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi.json (file)
add(ok): sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_dwi.html (file)
add(ok): sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi.html (file)
add(ok): sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-114_dwi.html (file)
add(ok): sub-cIVs041_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-217_dwi.html (file)
add(ok): sub-cIVs041_ses-s1Bx2_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215755_c4cf0f30-ae53-4e2b-af83-414c77957554.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs041_2025.10.09T23.57.54-4076348_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215755_c4cf0f30-ae53-4e2b-af83-414c77957554.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-116_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs041/figures/sub-cIVs041_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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action summary:
copy (ok: 53)
flock: getting lock took 0.000981 seconds
flock: executing git
SUCCESS
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