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ds003416-mriqc/logs/sub-cIVs020_10066433.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_470382/ds (dataset)
install(ok): /var/lib/condor/execute/dir_470382/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_470382/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_470382/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:58:15 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:58:15 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:58:15 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:58:15 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:58:15 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:58:15 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215813_a3186bc7-5bbe-456c-b749-efb7de56bbdf.toml.
2025-10-09 21:58:20 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:58:21 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:58:21 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:58:22 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:58:27 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:58:32 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/6a559f05814068777d0da1af3168b9bb3fff3fd5/conform".
2025-10-09 21:58:32 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:58:33 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.343232s.
2025-10-09 21:58:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/load_bmat".
2025-10-09 21:58:34 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.236415s.
2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/sanitize".
2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:37 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.877124s.
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/e47ba8387316b1586aa7f19fdeec108bb2ce3434/provenance".
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021027s.
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/load_bmat".
2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:39 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02429s.
2025-10-09 21:58:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/sanitize".
2025-10-09 21:58:40 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:41 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.091254s.
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d1c297b8e822837a72a631cefef97955f5b01050/provenance".
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020975s.
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/load_bmat".
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.027196s.
2025-10-09 21:58:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/sanitize".
2025-10-09 21:58:44 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:45 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.125526s.
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/20b500e2938f9693be857cb7b75e4745fb664de5/provenance".
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.027972s.
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/load_bmat".
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:58:46 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024269s.
2025-10-09 21:58:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/sanitize".
2025-10-09 21:58:48 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:58:49 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.097547s.
2025-10-09 21:58:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/603ac608a55afd1ae94a9afecda93653b4f0b199/provenance".
2025-10-09 21:58:50 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:58:50 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.028165s.
2025-10-09 21:58:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/pre_clip".
2025-10-09 21:58:50 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:59:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.011173s.
2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/6a559f05814068777d0da1af3168b9bb3fff3fd5/RotationMask".
2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:59:03 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.062029s.
2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotMosaicNoise".
2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.597945s.
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/shells".
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000821s.
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/piesno".
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:13 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.101272s.
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/shells".
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000721s.
2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/piesno".
2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:17 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.067848s.
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/shells".
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00099s.
2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/piesno".
2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.35159s.
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/shells".
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000762s.
2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/piesno".
2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.2655859999999999s.
2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/pre_n4".
2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:45 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 138.119798s.
2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_background".
2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009675s.
2025-10-09 22:01:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/dwi_ref".
2025-10-09 22:01:47 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:47 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.5771s.
2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/get_lowb".
2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:49 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.815492s.
2025-10-09 22:01:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/dwi_ref".
2025-10-09 22:01:50 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:51 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.81504s.
2025-10-09 22:01:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/get_lowb".
2025-10-09 22:01:52 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:53 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.839884s.
2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/dwi_ref".
2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:01:55 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.750499s.
2025-10-09 22:01:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/get_lowb".
2025-10-09 22:01:56 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:01:59 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 2.572248s.
2025-10-09 22:02:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/dwi_ref".
2025-10-09 22:02:00 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 22:02:01 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.016815s.
2025-10-09 22:02:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/get_lowb".
2025-10-09 22:02:02 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:02:03 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.464253s.
2025-10-09 22:02:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/synthstrip".
2025-10-09 22:02:04 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:03:48 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 103.433058s.
2025-10-09 22:03:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/pre_clip".
2025-10-09 22:03:48 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:03:49 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.671523s.
2025-10-09 22:03:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/SharpenEPI".
2025-10-09 22:03:50 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.94686s.
2025-10-09 22:04:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/hmc_b0".
2025-10-09 22:04:00 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:22 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.022737s.
2025-10-09 22:04:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/pre_clip".
2025-10-09 22:04:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.702504s.
2025-10-09 22:04:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/SharpenEPI".
2025-10-09 22:04:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:35 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.099051s.
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/hmc_b0".
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:04:58 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.715336s.
2025-10-09 22:04:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/pre_clip".
2025-10-09 22:04:58 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:04:59 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.684831s.
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/SharpenEPI".
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:08 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.851716s.
2025-10-09 22:05:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/hmc_b0".
2025-10-09 22:05:08 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:05:36 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.888518s.
2025-10-09 22:05:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/pre_clip".
2025-10-09 22:05:39 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:05:39 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.699643s.
2025-10-09 22:05:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/SharpenEPI".
2025-10-09 22:05:40 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:49 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.164329s.
2025-10-09 22:05:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/hmc_b0".
2025-10-09 22:05:50 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.165655s.
2025-10-09 22:06:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/post_n4".
2025-10-09 22:06:21 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:06:49 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 28.092776s.
2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6a559f05814068777d0da1af3168b9bb3fff3fd5/smoothness".
2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:06:56 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.404079s.
2025-10-09 22:06:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotMosaicZoomed".
2025-10-09 22:06:57 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:07:02 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.332253s.
2025-10-09 22:07:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotBrainmask".
2025-10-09 22:07:03 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:07:07 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.139754s.
2025-10-09 22:07:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/pre_n4".
2025-10-09 22:07:09 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:17 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.034913s.
2025-10-09 22:07:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/pre_n4".
2025-10-09 22:07:19 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:27 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.957461s.
2025-10-09 22:07:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/pre_n4".
2025-10-09 22:07:29 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:37 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.089139s.
2025-10-09 22:07:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/pre_n4".
2025-10-09 22:07:39 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:07:47 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.014195s.
2025-10-09 22:07:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/final_masked".
2025-10-09 22:07:49 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:07:49 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.318858s.
2025-10-09 22:07:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization".
2025-10-09 22:07:51 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:07:51 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:09:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:09:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:09:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:09:32 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:09:34 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:09:34 | INFO | niworkflows | Generating visual report
2025-10-09 22:09:56 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 125.507436s.
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_zoomed".
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005434s.
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_bmask".
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005223s.
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/synthstrip".
2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:45 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.933057s.
2025-10-09 22:10:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/synthstrip".
2025-10-09 22:10:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:11:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.412206s.
2025-10-09 22:11:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/synthstrip".
2025-10-09 22:11:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:12:25 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.940405s.
2025-10-09 22:12:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/synthstrip".
2025-10-09 22:12:27 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:13:12 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 45.634019s.
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_norm".
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005222s.
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/post_n4".
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:13:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.7290419999999997s.
2025-10-09 22:13:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/sp_mask".
2025-10-09 22:13:17 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:13:18 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.929101s.
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/drift".
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:13:19 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9994, 0.9979, 1.0014, 0.9999, 1.0014, 0.9983.
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.766975s.
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/EPI2MNI".
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:13:21 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:13:51 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:13:51 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:15:05 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:15:05 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:15:05 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:24 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 123.32362s.
2025-10-09 22:15:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/post_n4".
2025-10-09 22:15:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:15:27 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.659294s.
2025-10-09 22:15:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/sp_mask".
2025-10-09 22:15:29 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:15:30 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.680349s.
2025-10-09 22:15:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/drift".
2025-10-09 22:15:31 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:15:31 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9999, 0.9978, 1.0015, 0.9987, 0.9975, 0.9976.
2025-10-09 22:15:33 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.667471s.
2025-10-09 22:15:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/EPI2MNI".
2025-10-09 22:15:33 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:15:33 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:16:00 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/EPI2MNI/stderr.nipype-init).
2025-10-09 22:16:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:16:00 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:17:13 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:17:13 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:17:13 | INFO | niworkflows | Generating visual report
2025-10-09 22:17:32 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 119.181662s.
2025-10-09 22:17:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/post_n4".
2025-10-09 22:17:33 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:17:36 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.69482s.
2025-10-09 22:17:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/sp_mask".
2025-10-09 22:17:37 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:17:38 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.998589s.
2025-10-09 22:17:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/drift".
2025-10-09 22:17:39 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:17:39 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0012, 0.9964, 1.0044, 1.0023, 1.0008, 0.9995, 0.9995, 0.9981.
2025-10-09 22:17:41 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.149776s.
2025-10-09 22:17:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/EPI2MNI".
2025-10-09 22:17:43 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:17:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:18:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:18:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:19:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:19:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:19:30 | INFO | niworkflows | Generating visual report
2025-10-09 22:19:49 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.28237s.
2025-10-09 22:19:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/post_n4".
2025-10-09 22:19:51 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:19:54 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.849138s.
2025-10-09 22:19:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/sp_mask".
2025-10-09 22:19:55 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:19:56 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.014224s.
2025-10-09 22:19:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/drift".
2025-10-09 22:19:57 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:19:57 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9982, 0.9946, 1.0007, 1.0, 0.9985, 0.9963, 0.9967, 0.9999.
2025-10-09 22:19:59 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.179716s.
2025-10-09 22:20:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/EPI2MNI".
2025-10-09 22:20:01 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:20:01 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:20:30 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:20:30 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/SharpenEPI/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:21:48 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:21:48 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:21:48 | INFO | niworkflows | Generating visual report
2025-10-09 22:22:08 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.946699s.
2025-10-09 22:22:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/final_masked".
2025-10-09 22:22:09 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:09 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.03951s.
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/dwidenoise".
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.850516s.
2025-10-09 22:22:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ResampleSegmentation".
2025-10-09 22:22:37 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:41 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.287049s.
2025-10-09 22:22:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d1c297b8e822837a72a631cefef97955f5b01050/final_masked".
2025-10-09 22:22:43 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:43 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037917s.
2025-10-09 22:22:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/dwidenoise".
2025-10-09 22:22:45 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:10 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 25.346122s.
2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d1c297b8e822837a72a631cefef97955f5b01050/ResampleSegmentation".
2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.19714s.
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/20b500e2938f9693be857cb7b75e4745fb664de5/final_masked".
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.039139s.
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/dwidenoise".
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 44.609329s.
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/20b500e2938f9693be857cb7b75e4745fb664de5/ResampleSegmentation".
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.263237s.
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/final_masked".
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.03913s.
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/dwidenoise".
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:24:59 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 45.761173s.
2025-10-09 22:24:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/603ac608a55afd1ae94a9afecda93653b4f0b199/ResampleSegmentation".
2025-10-09 22:24:59 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:25:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.206043s.
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/dwimodel".
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:10 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.504459s.
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/e47ba8387316b1586aa7f19fdeec108bb2ce3434/estimate_sigma".
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:11 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.041329s.
2025-10-09 22:25:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/get_wm".
2025-10-09 22:25:13 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:13 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039386s.
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/dwimodel".
2025-10-09 22:25:15 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.51612s.
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d1c297b8e822837a72a631cefef97955f5b01050/estimate_sigma".
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.06589s.
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/get_wm".
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.04167s.
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/dwimodel".
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:30 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.950705s.
2025-10-09 22:25:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/20b500e2938f9693be857cb7b75e4745fb664de5/estimate_sigma".
2025-10-09 22:25:31 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:31 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.040761s.
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/get_wm".
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039304s.
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/dwimodel".
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:25:40 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 5.031154s.
2025-10-09 22:25:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/603ac608a55afd1ae94a9afecda93653b4f0b199/estimate_sigma".
2025-10-09 22:25:41 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:41 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.063094s.
2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/get_wm".
2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038916s.
2025-10-09 22:25:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/cc_mask".
2025-10-09 22:25:45 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.624551s.
2025-10-09 22:25:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_fa".
2025-10-09 22:25:47 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:49 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.5621070000000001s.
2025-10-09 22:25:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_md".
2025-10-09 22:25:49 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:51 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.879893s.
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/plot_heatmap".
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:25:55 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.409338s.
2025-10-09 22:25:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/cc_mask".
2025-10-09 22:25:55 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:25:56 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.579887s.
2025-10-09 22:25:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_fa".
2025-10-09 22:25:57 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:25:59 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.62833s.
2025-10-09 22:25:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_md".
2025-10-09 22:25:59 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:01 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.936498s.
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/plot_heatmap".
2025-10-09 22:26:03 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.343803s.
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/cc_mask".
2025-10-09 22:26:05 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.602323s.
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_fa".
2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.723904s.
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_md".
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.961723s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/plot_heatmap".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.388137s.
2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/cc_mask".
2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:26:16 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.565224s.
2025-10-09 22:26:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_fa".
2025-10-09 22:26:17 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.813599s.
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_md".
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.7561170000000002s.
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/plot_heatmap".
2025-10-09 22:26:21 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.3633410000000001s.
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_fa".
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005982s.
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_md".
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:23 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005082s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_hm".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005235s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_fa".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005401s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_md".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005351s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_hm".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.00578s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_fa".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005354s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_md".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.016557s.
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_hm".
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:24 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005305s.
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_fa".
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.006014s.
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_md".
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.006001s.
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_hm".
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.006023s.
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:25 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 9.529161s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:45 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 9.437285s.
2025-10-09 22:26:45 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:45 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 9.411162000000001s.
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6a559f05814068777d0da1af3168b9bb3fff3fd5/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6a559f05814068777d0da1af3168b9bb3fff3fd5/Enhance".
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:26:58 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.662327s.
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/6a559f05814068777d0da1af3168b9bb3fff3fd5/format_tpm_names".
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:01 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.087525s.
2025-10-09 22:27:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6a559f05814068777d0da1af3168b9bb3fff3fd5/Grad".
2025-10-09 22:27:03 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:11 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.279829s.
2025-10-09 22:27:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6a559f05814068777d0da1af3168b9bb3fff3fd5/apply_mask".
2025-10-09 22:27:11 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:27:12 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.301702s.
2025-10-09 22:27:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6a559f05814068777d0da1af3168b9bb3fff3fd5/GradientThreshold".
2025-10-09 22:27:13 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:27:30 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 16.293297s.
2025-10-09 22:27:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/6a559f05814068777d0da1af3168b9bb3fff3fd5/segmentation".
2025-10-09 22:27:31 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:29:12 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 100.984952s.
2025-10-09 22:29:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/6a559f05814068777d0da1af3168b9bb3fff3fd5/ArtifactMask".
2025-10-09 22:29:13 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:29:20 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.72018s.
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotHeadmask".
2025-10-09 22:29:21 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.447232s.
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6a559f05814068777d0da1af3168b9bb3fff3fd5/harmonize".
2025-10-09 22:29:25 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:29:27 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.274233s.
2025-10-09 22:29:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotSegmentation".
2025-10-09 22:29:27 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:31 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 4.025534s.
2025-10-09 22:29:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6a559f05814068777d0da1af3168b9bb3fff3fd5/provenance".
2025-10-09 22:29:33 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:29:33 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.072715s.
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6a559f05814068777d0da1af3168b9bb3fff3fd5/ComputeQI2".
2025-10-09 22:29:34 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:29:45 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 11.660401s.
2025-10-09 22:29:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotAirmask".
2025-10-09 22:29:47 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:51 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.419134s.
2025-10-09 22:29:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/PlotArtmask".
2025-10-09 22:29:51 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.241417s.
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_headmask".
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004935s.
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6a559f05814068777d0da1af3168b9bb3fff3fd5/measures".
2025-10-09 22:29:55 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:29:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.2512)
2025-10-09 22:29:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.2512)
2025-10-09 22:29:59 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.2512)
2025-10-09 22:30:06 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 10.744152s.
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_segm".
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:07 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.012675s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_noisefit".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004918s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_airmask".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004932s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6a559f05814068777d0da1af3168b9bb3fff3fd5/ds_report_artmask".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.005026s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6a559f05814068777d0da1af3168b9bb3fff3fd5/datasink".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000638s.
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/averages/mapflow/_averages0".
2025-10-09 22:30:08 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.354831s.
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/averages/mapflow/_averages1".
2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.327872s.
2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/averages/mapflow/_averages0".
2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/averages/mapflow/_averages1".
2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:30:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/motion_correct".
2025-10-09 22:30:13 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 190.589764s.
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ComputeFD".
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:33:25 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001273s.
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/bvec_rot".
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:33:27 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018093s.
2025-10-09 22:33:29 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/stddev/mapflow/_stddev0".
2025-10-09 22:33:29 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:30 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.430811s.
2025-10-09 22:33:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/stddev/mapflow/_stddev1".
2025-10-09 22:33:31 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:32 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.457687s.
2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/stddev/mapflow/_stddev0".
2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/stddev/mapflow/_stddev1".
2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:33:35 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/averages/mapflow/_averages0".
2025-10-09 22:33:35 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:36 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.337227s.
2025-10-09 22:33:37 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/averages/mapflow/_averages1".
2025-10-09 22:33:37 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.330944s.
2025-10-09 22:33:39 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/averages/mapflow/_averages0".
2025-10-09 22:33:39 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:33:39 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:33:39 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/averages/mapflow/_averages1".
2025-10-09 22:33:39 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:33:39 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:33:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/d1c297b8e822837a72a631cefef97955f5b01050/motion_correct".
2025-10-09 22:33:41 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 198.649358s.
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/d1c297b8e822837a72a631cefef97955f5b01050/ComputeFD".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004694s.
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/d1c297b8e822837a72a631cefef97955f5b01050/bvec_rot".
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018265s.
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/stddev/mapflow/_stddev0".
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.481979s.
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/stddev/mapflow/_stddev1".
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.517283s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/stddev/mapflow/_stddev0".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/stddev/mapflow/_stddev1".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/averages/mapflow/_averages0".
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.397508s.
2025-10-09 22:37:13 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/averages/mapflow/_averages1".
2025-10-09 22:37:13 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:37:14 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.466867s.
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/averages/mapflow/_averages0".
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/averages/mapflow/_averages1".
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/20b500e2938f9693be857cb7b75e4745fb664de5/motion_correct".
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 230.814784s.
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/20b500e2938f9693be857cb7b75e4745fb664de5/ComputeFD".
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001293s.
2025-10-09 22:41:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/20b500e2938f9693be857cb7b75e4745fb664de5/bvec_rot".
2025-10-09 22:41:12 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:41:12 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020443s.
2025-10-09 22:41:14 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/stddev/mapflow/_stddev0".
2025-10-09 22:41:14 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:14 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.582811s.
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/stddev/mapflow/_stddev1".
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.602855s.
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/stddev/mapflow/_stddev0".
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/stddev/mapflow/_stddev1".
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:41:20 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/averages/mapflow/_averages0".
2025-10-09 22:41:20 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:20 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.42684s.
2025-10-09 22:41:22 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/averages/mapflow/_averages1".
2025-10-09 22:41:22 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:41:22 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.396705s.
2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/averages/mapflow/_averages0".
2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/averages/mapflow/_averages1".
2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:41:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/603ac608a55afd1ae94a9afecda93653b4f0b199/motion_correct".
2025-10-09 22:41:26 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:20 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 234.180937s.
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/603ac608a55afd1ae94a9afecda93653b4f0b199/ComputeFD".
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:45:22 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004779s.
2025-10-09 22:45:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/603ac608a55afd1ae94a9afecda93653b4f0b199/bvec_rot".
2025-10-09 22:45:24 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:45:24 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.02033s.
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/stddev/mapflow/_stddev0".
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.558656s.
2025-10-09 22:45:28 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/stddev/mapflow/_stddev1".
2025-10-09 22:45:28 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:45:28 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.55357s.
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/stddev/mapflow/_stddev0".
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/stddev/mapflow/_stddev1".
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:45:32 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:32 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:33 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.481579s.
2025-10-09 22:45:34 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:34 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:35 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.713522s.
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:38 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:38 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:39 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.20173s.
2025-10-09 22:45:40 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:40 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:43 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.670848s.
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/e47ba8387316b1586aa7f19fdeec108bb2ce3434/measures".
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:50 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.146466s.
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/e47ba8387316b1586aa7f19fdeec108bb2ce3434/datasink".
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000499s.
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:52 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/stddev/mapflow/_stddev0/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/averages/mapflow/_averages0/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:52 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 20.499686s.
2025-10-09 22:46:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:14 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:14 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/stddev/mapflow/_stddev1/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/e47ba8387316b1586aa7f19fdeec108bb2ce3434/averages/mapflow/_averages1/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:14 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.916709s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.516114s.
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:41 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.7170269999999999s.
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.15807s.
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:49 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.557624s.
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d1c297b8e822837a72a631cefef97955f5b01050/measures".
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:56 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.08502s.
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d1c297b8e822837a72a631cefef97955f5b01050/datasink".
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000629s.
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:58 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/stddev/mapflow/_stddev0/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/averages/mapflow/_averages0/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:58 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 20.18812s.
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:20 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/stddev/mapflow/_stddev1/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/d1c297b8e822837a72a631cefef97955f5b01050/averages/mapflow/_averages1/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:20 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:40 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 20.390188s.
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:44 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:44 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.488254s.
2025-10-09 22:47:46 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:46 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:47 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.568919s.
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:48 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:50 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:50 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:51 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.450799s.
2025-10-09 22:47:52 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:52 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:56 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.668063s.
2025-10-09 22:47:58 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:58 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:58 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:58 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:58 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:58 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:48:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/20b500e2938f9693be857cb7b75e4745fb664de5/measures".
2025-10-09 22:48:00 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.826947s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/20b500e2938f9693be857cb7b75e4745fb664de5/datasink".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000567s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:06 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/stddev/mapflow/_stddev0/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/averages/mapflow/_averages0/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:06 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.729481s.
2025-10-09 22:48:28 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:28 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:48:28 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/stddev/mapflow/_stddev1/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/20b500e2938f9693be857cb7b75e4745fb664de5/averages/mapflow/_averages1/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:48:28 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.707997s.
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:48 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:50 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:50 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.506489s.
2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.6323050000000001s.
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.444404s.
2025-10-09 22:48:58 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:48:58 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.796061s.
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/603ac608a55afd1ae94a9afecda93653b4f0b199/measures".
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.481793s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/603ac608a55afd1ae94a9afecda93653b4f0b199/datasink".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000468s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:12 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/stddev/mapflow/_stddev0/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/averages/mapflow/_averages0/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:12 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:29 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 16.679212s.
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:49:30 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/stddev/mapflow/_stddev1/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/603ac608a55afd1ae94a9afecda93653b4f0b199/averages/mapflow/_averages1/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:49:30 | INFO | nipype.interface | Generating visual report
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.09392s.
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005012s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.006326s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004918s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005028s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004988s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005118s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004955s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00493s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004941s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004872s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004954s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004825s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004836s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.00482s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004707s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004495s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.006942s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e47ba8387316b1586aa7f19fdeec108bb2ce3434/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.006839s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00482s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004438s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.0047s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d1c297b8e822837a72a631cefef97955f5b01050/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004385s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004668s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004467s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004719s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/20b500e2938f9693be857cb7b75e4745fb664de5/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004316s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004777s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.00439s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004985s.
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004872s.
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004699s.
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/603ac608a55afd1ae94a9afecda93653b4f0b199/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004482s.
2025-10-09 22:49:58 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:49:59 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:49:59 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 21s per subject.
2025-10-09 22:49:59 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 51min 46s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/anat/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n3r21x21x22peAPA_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs020 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_470382/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215813_a3186bc7-5bbe-456c-b749-efb7de56bbdf.toml (file)
add(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_info.json (file)
add(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_stderr (file)
add(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_stdout (file)
add(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_usage.json (file)
add(ok): logs/mriqc-20251009-215813_a3186bc7-5bbe-456c-b749-efb7de56bbdf.log (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-fa_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-md_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-fa_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-md_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-fa_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_desc-md_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-fa_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_desc-md_dwi.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs020/ses-s1Bx3/anat/sub-cIVs020_ses-s1Bx3_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi.json (file)
add(ok): sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi.json (file)
add(ok): sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi.json (file)
add(ok): sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi.json (file)
add(ok): sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_dwi.html (file)
add(ok): sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi.html (file)
add(ok): sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi.html (file)
add(ok): sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi.html (file)
add(ok): sub-cIVs020_ses-s1Bx3_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215813_a3186bc7-5bbe-456c-b749-efb7de56bbdf.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs020_2025.10.09T23.58.12-595124_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215813_a3186bc7-5bbe-456c-b749-efb7de56bbdf.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-113_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/figures/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b1000n40r21x21x22peAPP_run-217_dwi.json (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020/ses-s1Bx3/dwi/sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-111_dwi.json (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs020_ses-s1Bx3_acq-b2000n56r21x21x22peAPP_run-215_dwi.html (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs020_ses-s1Bx3_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000488 seconds
flock: executing git
SUCCESS
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