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ds003416-mriqc/logs/sub-cIVs009_10066467.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_3950121/ds (dataset)
install(ok): /var/lib/condor/execute/dir_3950121/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3950121/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3950121/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:55:50 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:55:50 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:55:50 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:55:50 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:55:50 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:55:50 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215548_61355234-9606-496c-a4bb-e08fe55448e6.toml.
2025-10-09 21:55:55 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:55:56 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:55:56 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:55:57 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:56:01 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:56:06 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:56:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/2321409af47587497f602fac5063a628fbbcb3b6/conform".
2025-10-09 21:56:06 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:56:07 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.729451s.
2025-10-09 21:56:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/load_bmat".
2025-10-09 21:56:08 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:08 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.205798s.
2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/sanitize".
2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023101s.
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/57df6e8431d73bb1baa5422221adb44b85b12a3e/provenance".
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021305s.
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/load_bmat".
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.022366s.
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/sanitize".
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.022827s.
2025-10-09 21:56:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/provenance".
2025-10-09 21:56:16 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:16 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021699s.
2025-10-09 21:56:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/load_bmat".
2025-10-09 21:56:16 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:16 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023655s.
2025-10-09 21:56:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/sanitize".
2025-10-09 21:56:18 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:18 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023196s.
2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/provenance".
2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.027395s.
2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/load_bmat".
2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.022909s.
2025-10-09 21:56:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/sanitize".
2025-10-09 21:56:22 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:22 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.022779s.
2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/provenance".
2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.027292s.
2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2321409af47587497f602fac5063a628fbbcb3b6/pre_clip".
2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:56:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.326652s.
2025-10-09 21:56:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/2321409af47587497f602fac5063a628fbbcb3b6/RotationMask".
2025-10-09 21:56:36 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:56:37 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.988281s.
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotMosaicNoise".
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:56:43 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.133629s.
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/shells".
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000717s.
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/piesno".
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:47 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.372574s.
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/shells".
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000657s.
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/piesno".
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:51 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.956755s.
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/shells".
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000721s.
2025-10-09 21:56:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/piesno".
2025-10-09 21:56:54 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:55 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.335715s.
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/shells".
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:56 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000913s.
2025-10-09 21:56:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/piesno".
2025-10-09 21:56:58 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:59 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.271212s.
2025-10-09 21:57:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2321409af47587497f602fac5063a628fbbcb3b6/pre_n4".
2025-10-09 21:57:00 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 126.990765s.
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_background".
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008847s.
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/dwi_ref".
2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:09 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.551102s.
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/get_lowb".
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.357486s.
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/dwi_ref".
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.550025s.
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/get_lowb".
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.340329s.
2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/dwi_ref".
2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:17 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.70096s.
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/get_lowb".
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.428033s.
2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/dwi_ref".
2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:21 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.690078s.
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/get_lowb".
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.435493s.
2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2321409af47587497f602fac5063a628fbbcb3b6/synthstrip".
2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:01:00 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 96.198348s.
2025-10-09 22:01:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/pre_clip".
2025-10-09 22:01:02 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:01:03 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.742491s.
2025-10-09 22:01:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/SharpenEPI".
2025-10-09 22:01:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:12 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.019173s.
2025-10-09 22:01:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/hmc_b0".
2025-10-09 22:01:14 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:01:37 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.698671s.
2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/pre_clip".
2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:01:39 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.702492s.
2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/SharpenEPI".
2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.192893s.
2025-10-09 22:01:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/hmc_b0".
2025-10-09 22:01:50 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:13 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.892168s.
2025-10-09 22:02:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/pre_clip".
2025-10-09 22:02:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.752607s.
2025-10-09 22:02:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/SharpenEPI".
2025-10-09 22:02:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:24 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.130713s.
2025-10-09 22:02:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/hmc_b0".
2025-10-09 22:02:26 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.65127s.
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/pre_clip".
2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.713762s.
2025-10-09 22:02:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/SharpenEPI".
2025-10-09 22:02:58 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.095759s.
2025-10-09 22:03:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/hmc_b0".
2025-10-09 22:03:08 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.734298s.
2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2321409af47587497f602fac5063a628fbbcb3b6/post_n4".
2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:07 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 30.696186s.
2025-10-09 22:04:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2321409af47587497f602fac5063a628fbbcb3b6/smoothness".
2025-10-09 22:04:08 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.85186s.
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotMosaicZoomed".
2025-10-09 22:04:14 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:04:19 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.351933s.
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotBrainmask".
2025-10-09 22:04:20 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:04:24 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.90869s.
2025-10-09 22:04:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/pre_n4".
2025-10-09 22:04:26 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:34 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.946138s.
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/pre_n4".
2025-10-09 22:04:36 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.856324s.
2025-10-09 22:04:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/pre_n4".
2025-10-09 22:04:44 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:52 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.838078s.
2025-10-09 22:04:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/pre_n4".
2025-10-09 22:04:52 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.774432s.
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2321409af47587497f602fac5063a628fbbcb3b6/final_masked".
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:05:00 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.355505s.
2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization".
2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:05:03 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:06:23 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:06:23 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:06:23 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:06:42 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:06:43 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:06:43 | INFO | niworkflows | Generating visual report
2025-10-09 22:07:03 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 120.965384s.
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_zoomed".
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005402s.
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_bmask".
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005399s.
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/synthstrip".
2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:07:56 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 51.571593s.
2025-10-09 22:07:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/synthstrip".
2025-10-09 22:07:56 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:08:49 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.753438s.
2025-10-09 22:08:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/synthstrip".
2025-10-09 22:08:50 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:46 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 55.258898s.
2025-10-09 22:09:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/synthstrip".
2025-10-09 22:09:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:48 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 62.041761s.
2025-10-09 22:10:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_norm".
2025-10-09 22:10:50 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:10:50 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005542s.
2025-10-09 22:10:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/post_n4".
2025-10-09 22:10:51 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:10:54 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 3.004943s.
2025-10-09 22:10:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/sp_mask".
2025-10-09 22:10:55 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:10:56 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.167005s.
2025-10-09 22:10:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/drift".
2025-10-09 22:10:57 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:10:57 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9975, 0.994, 1.003, 0.9999, 0.9975, 0.9939.
2025-10-09 22:10:59 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.093543s.
2025-10-09 22:11:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/EPI2MNI".
2025-10-09 22:11:00 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:11:00 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:11:42 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:11:42 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:12:59 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:12:59 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:12:59 | INFO | niworkflows | Generating visual report
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 138.124494s.
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/post_n4".
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:13:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.827261s.
2025-10-09 22:13:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/sp_mask".
2025-10-09 22:13:25 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:13:25 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.66414s.
2025-10-09 22:13:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/drift".
2025-10-09 22:13:27 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:13:27 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9995, 0.9971, 1.0039, 1.001, 0.9984, 0.9954.
2025-10-09 22:13:28 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.760647s.
2025-10-09 22:13:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/EPI2MNI".
2025-10-09 22:13:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:13:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:14:02 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/EPI2MNI/stderr.nipype-init).
2025-10-09 22:14:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:14:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:15:19 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:15:19 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:15:19 | INFO | niworkflows | Generating visual report
2025-10-09 22:15:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.784529s.
2025-10-09 22:15:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/post_n4".
2025-10-09 22:15:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:15:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.6885019999999997s.
2025-10-09 22:15:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/sp_mask".
2025-10-09 22:15:43 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:15:44 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.004772s.
2025-10-09 22:15:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/drift".
2025-10-09 22:15:45 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:15:45 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9969, 0.9934, 1.0007, 0.9985, 0.9945, 0.9915, 0.9961, 0.9955.
2025-10-09 22:15:47 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.19019s.
2025-10-09 22:15:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/EPI2MNI".
2025-10-09 22:15:49 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:15:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:16:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:16:21 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:17:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:17:37 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:17:37 | INFO | niworkflows | Generating visual report
2025-10-09 22:17:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.944955s.
2025-10-09 22:17:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/post_n4".
2025-10-09 22:17:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:17:59 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.727609s.
2025-10-09 22:18:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/sp_mask".
2025-10-09 22:18:01 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:18:02 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.971756s.
2025-10-09 22:18:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/drift".
2025-10-09 22:18:03 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:18:03 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9975, 0.9959, 1.0035, 1.0011, 0.9974, 0.9943, 0.9918, 0.996.
2025-10-09 22:18:05 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.179176s.
2025-10-09 22:18:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/EPI2MNI".
2025-10-09 22:18:07 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:18:07 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:18:42 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:18:42 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/SharpenEPI/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:20:00 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:20:00 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:20:00 | INFO | niworkflows | Generating visual report
2025-10-09 22:20:19 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 132.648377s.
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/final_masked".
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.043248s.
2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/dwidenoise".
2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:20:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 25.335036s.
2025-10-09 22:20:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/57df6e8431d73bb1baa5422221adb44b85b12a3e/ResampleSegmentation".
2025-10-09 22:20:49 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:20:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.561224s.
2025-10-09 22:20:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/final_masked".
2025-10-09 22:20:55 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:20:55 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.040373s.
2025-10-09 22:20:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/dwidenoise".
2025-10-09 22:20:57 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:21:22 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 25.692497s.
2025-10-09 22:21:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ResampleSegmentation".
2025-10-09 22:21:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:21:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.403718s.
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/final_masked".
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:29 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.042453s.
2025-10-09 22:21:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/dwidenoise".
2025-10-09 22:21:31 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:22:17 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 46.080525s.
2025-10-09 22:22:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ResampleSegmentation".
2025-10-09 22:22:19 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.206778s.
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/final_masked".
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.041818s.
2025-10-09 22:22:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/dwidenoise".
2025-10-09 22:22:27 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 46.063791s.
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ResampleSegmentation".
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.135466s.
2025-10-09 22:23:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/dwimodel".
2025-10-09 22:23:21 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:25 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.708586s.
2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/57df6e8431d73bb1baa5422221adb44b85b12a3e/estimate_sigma".
2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042442s.
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/get_wm".
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.039548s.
2025-10-09 22:23:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/dwimodel".
2025-10-09 22:23:31 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:35 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.648684s.
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/estimate_sigma".
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:37 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.044665s.
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/get_wm".
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.064353s.
2025-10-09 22:23:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/dwimodel".
2025-10-09 22:23:41 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:46 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 5.260854s.
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/estimate_sigma".
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.041485s.
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/get_wm".
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.038116s.
2025-10-09 22:23:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/dwimodel".
2025-10-09 22:23:51 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:23:56 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 5.090613s.
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/estimate_sigma".
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.040233s.
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/get_wm".
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:59 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.062205s.
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/cc_mask".
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.612985s.
2025-10-09 22:24:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_fa".
2025-10-09 22:24:03 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:04 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.494016s.
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_md".
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.8355320000000002s.
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/plot_heatmap".
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:08 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.35576s.
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/cc_mask".
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:09 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.58186s.
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_fa".
2025-10-09 22:24:11 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.742617s.
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_md".
2025-10-09 22:24:13 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:15 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.906262s.
2025-10-09 22:24:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/plot_heatmap".
2025-10-09 22:24:17 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:18 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.3068089999999999s.
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/cc_mask".
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:19 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.64114s.
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_fa".
2025-10-09 22:24:21 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:23 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.890188s.
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_md".
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:27 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.881069s.
2025-10-09 22:24:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/plot_heatmap".
2025-10-09 22:24:29 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:30 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.402206s.
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/cc_mask".
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:24:31 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.600232s.
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_fa".
2025-10-09 22:24:33 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.71318s.
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_md".
2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:24:37 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.799302s.
2025-10-09 22:24:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/plot_heatmap".
2025-10-09 22:24:37 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:24:38 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.450584s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_fa".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005726s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_md".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005379s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_hm".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005985s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_fa".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005267s.
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_md".
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:39 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005425s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_hm".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005376s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_fa".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005293s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_md".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005545s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_hm".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005276s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_fa".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005211s.
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_md".
2025-10-09 22:24:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005408s.
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_hm".
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005453s.
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:24:41 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:24:52 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 11.237577s.
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:24:53 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 11.244255s.
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:25:05 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:25:16 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 11.271431s.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2321409af47587497f602fac5063a628fbbcb3b6/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:25:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2321409af47587497f602fac5063a628fbbcb3b6/Enhance".
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:20 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.767344s.
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2321409af47587497f602fac5063a628fbbcb3b6/format_tpm_names".
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 2.248016s.
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2321409af47587497f602fac5063a628fbbcb3b6/Grad".
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.365461s.
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2321409af47587497f602fac5063a628fbbcb3b6/apply_mask".
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.350713s.
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2321409af47587497f602fac5063a628fbbcb3b6/GradientThreshold".
2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:25:51 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 16.523763s.
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2321409af47587497f602fac5063a628fbbcb3b6/segmentation".
2025-10-09 22:25:53 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:27:50 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 116.770784s.
2025-10-09 22:27:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/2321409af47587497f602fac5063a628fbbcb3b6/ArtifactMask".
2025-10-09 22:27:51 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:27:58 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.966889s.
2025-10-09 22:27:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotHeadmask".
2025-10-09 22:27:59 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:03 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.6866820000000002s.
2025-10-09 22:28:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2321409af47587497f602fac5063a628fbbcb3b6/harmonize".
2025-10-09 22:28:03 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:28:05 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.65712s.
2025-10-09 22:28:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotSegmentation".
2025-10-09 22:28:05 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:09 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 4.0799900000000004s.
2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2321409af47587497f602fac5063a628fbbcb3b6/provenance".
2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.078478s.
2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2321409af47587497f602fac5063a628fbbcb3b6/ComputeQI2".
2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:28:24 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.184141s.
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotAirmask".
2025-10-09 22:28:25 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:29 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.676341s.
2025-10-09 22:28:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/PlotArtmask".
2025-10-09 22:28:29 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.765554s.
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_headmask".
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.006277s.
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2321409af47587497f602fac5063a628fbbcb3b6/measures".
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:28:38 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1128)
2025-10-09 22:28:38 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1128)
2025-10-09 22:28:38 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1128)
2025-10-09 22:28:45 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 12.119956s.
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_segm".
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.005042s.
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_noisefit".
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.005s.
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_airmask".
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.00512s.
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2321409af47587497f602fac5063a628fbbcb3b6/ds_report_artmask".
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:28:47 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.005041s.
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2321409af47587497f602fac5063a628fbbcb3b6/datasink".
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000563s.
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/averages/mapflow/_averages0".
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.310679s.
2025-10-09 22:28:49 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/averages/mapflow/_averages1".
2025-10-09 22:28:49 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:28:49 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.326466s.
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/averages/mapflow/_averages0".
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/averages/mapflow/_averages1".
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:28:51 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:28:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/57df6e8431d73bb1baa5422221adb44b85b12a3e/motion_correct".
2025-10-09 22:28:53 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:31:27 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 153.488019s.
2025-10-09 22:31:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/57df6e8431d73bb1baa5422221adb44b85b12a3e/ComputeFD".
2025-10-09 22:31:27 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:31:27 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001246s.
2025-10-09 22:31:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/57df6e8431d73bb1baa5422221adb44b85b12a3e/bvec_rot".
2025-10-09 22:31:29 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:31:29 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018238s.
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/stddev/mapflow/_stddev0".
2025-10-09 22:31:31 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:32 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.473679s.
2025-10-09 22:31:33 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/stddev/mapflow/_stddev1".
2025-10-09 22:31:33 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:34 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.465969s.
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/stddev/mapflow/_stddev0".
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/stddev/mapflow/_stddev1".
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/averages/mapflow/_averages0".
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:37 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.308341s.
2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/averages/mapflow/_averages1".
2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.316496s.
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/averages/mapflow/_averages0".
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/averages/mapflow/_averages1".
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:31:41 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/motion_correct".
2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:34:16 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 152.957323s.
2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ComputeFD".
2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001224s.
2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/bvec_rot".
2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.018168s.
2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/stddev/mapflow/_stddev0".
2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:22 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.466755s.
2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/stddev/mapflow/_stddev1".
2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:24 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.435087s.
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/stddev/mapflow/_stddev0".
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/stddev/mapflow/_stddev1".
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:34:27 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/averages/mapflow/_averages0".
2025-10-09 22:34:27 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:28 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.395634s.
2025-10-09 22:34:29 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/averages/mapflow/_averages1".
2025-10-09 22:34:29 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:34:30 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.393499s.
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/averages/mapflow/_averages0".
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/averages/mapflow/_averages1".
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:34:31 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:34:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/motion_correct".
2025-10-09 22:34:33 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 217.769457s.
2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ComputeFD".
2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001569s.
2025-10-09 22:38:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/bvec_rot".
2025-10-09 22:38:13 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:38:13 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.021478s.
2025-10-09 22:38:15 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/stddev/mapflow/_stddev0".
2025-10-09 22:38:15 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:16 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.603083s.
2025-10-09 22:38:17 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/stddev/mapflow/_stddev1".
2025-10-09 22:38:17 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:18 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.601485s.
2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/stddev/mapflow/_stddev0".
2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/stddev/mapflow/_stddev1".
2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:38:21 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/averages/mapflow/_averages0".
2025-10-09 22:38:21 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.417451s.
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/averages/mapflow/_averages1".
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.396901s.
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/averages/mapflow/_averages0".
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/averages/mapflow/_averages1".
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/motion_correct".
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:12 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 224.714336s.
2025-10-09 22:42:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ComputeFD".
2025-10-09 22:42:13 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:42:13 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001386s.
2025-10-09 22:42:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/bvec_rot".
2025-10-09 22:42:15 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:42:15 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.021086s.
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/stddev/mapflow/_stddev0".
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.59898s.
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/stddev/mapflow/_stddev1".
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.592958s.
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/stddev/mapflow/_stddev0".
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/stddev/mapflow/_stddev1".
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:42:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:42:23 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:42:25 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.486235s.
2025-10-09 22:42:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:42:25 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.5946120000000001s.
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:42:29 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:42:29 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:42:31 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.190355s.
2025-10-09 22:42:31 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:42:31 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.6587490000000003s.
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:42:35 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:42:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/57df6e8431d73bb1baa5422221adb44b85b12a3e/measures".
2025-10-09 22:42:37 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:42:42 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.157839s.
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/57df6e8431d73bb1baa5422221adb44b85b12a3e/datasink".
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000536s.
2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:42:44 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/stddev/mapflow/_stddev0/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/averages/mapflow/_averages0/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:42:44 | INFO | nipype.interface | Generating visual report
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.622398s.
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:43:03 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:43:03 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/stddev/mapflow/_stddev1/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/57df6e8431d73bb1baa5422221adb44b85b12a3e/averages/mapflow/_averages1/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:43:03 | INFO | nipype.interface | Generating visual report
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 17.473636s.
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:43:21 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:43:23 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:43:23 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:43:25 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.5655139999999999s.
2025-10-09 22:43:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:43:25 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.662357s.
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:43:29 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:43:29 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:43:31 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.1931289999999999s.
2025-10-09 22:43:31 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:43:31 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.673358s.
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:43:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/measures".
2025-10-09 22:43:37 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.137173s.
2025-10-09 22:43:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/datasink".
2025-10-09 22:43:43 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:43:43 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00046s.
2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:43:44 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/stddev/mapflow/_stddev0/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/averages/mapflow/_averages0/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:43:44 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.952074s.
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:05 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/stddev/mapflow/_stddev1/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/averages/mapflow/_averages1/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:05 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.593618s.
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:44:29 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.571415s.
2025-10-09 22:44:29 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:44:29 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.6705290000000002s.
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:44:33 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:33 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.518996s.
2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:41 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 5.067154s.
2025-10-09 22:44:42 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:42 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:44:42 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:44:42 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:42 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:44:42 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:44:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/measures".
2025-10-09 22:44:43 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.626651s.
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/datasink".
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:44:49 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000503s.
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:50 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/stddev/mapflow/_stddev0/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/averages/mapflow/_averages0/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:50 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.446496s.
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:07 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/stddev/mapflow/_stddev1/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/averages/mapflow/_averages1/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:07 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.885587s.
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:45:32 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:32 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:33 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.499114s.
2025-10-09 22:45:33 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:34 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:35 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.566176s.
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:45:36 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:38 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:38 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:39 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.5456919999999998s.
2025-10-09 22:45:39 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:39 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.924717s.
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/measures".
2025-10-09 22:45:48 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:53 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.626927s.
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/datasink".
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000517s.
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:54 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/stddev/mapflow/_stddev0/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/averages/mapflow/_averages0/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:54 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.372351s.
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:12 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/stddev/mapflow/_stddev1/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/averages/mapflow/_averages1/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:12 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:31 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.96386s.
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005134s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005074s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005304s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005332s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005137s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005095s.
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005027s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005293s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005631s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005205s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00534s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005086s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005184s.
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005029s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004931s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004824s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004733s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/57df6e8431d73bb1baa5422221adb44b85b12a3e/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004746s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004831s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004587s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004894s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/08da5fc83b9c1c1ae2492200dedc6f8a0384cb91/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004644s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004902s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004565s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00486s.
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b8d7a9dd04793edbac9aefdcb9e5ab1348ba07ce/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004876s.
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004671s.
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004458s.
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005132s.
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004953s.
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004809s.
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/3eba190ea16283fbaa1b36a76325d7aa9ee87b4b/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004581s.
2025-10-09 22:46:42 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:46:43 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:46:43 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 11s per subject.
2025-10-09 22:46:43 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 50min 55s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/anat/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs009 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_3950121/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215548_61355234-9606-496c-a4bb-e08fe55448e6.toml (file)
add(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_info.json (file)
add(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_stderr (file)
add(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_stdout (file)
add(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_usage.json (file)
add(ok): logs/mriqc-20251009-215548_61355234-9606-496c-a4bb-e08fe55448e6.log (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-fa_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-md_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-fa_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-md_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-fa_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_desc-md_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-fa_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_desc-md_dwi.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs009/ses-s1Bx2/anat/sub-cIVs009_ses-s1Bx2_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi.json (file)
add(ok): sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi.json (file)
add(ok): sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi.json (file)
add(ok): sub-cIVs009/ses-s1Bx2/dwi/sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi.json (file)
add(ok): sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi.html (file)
add(ok): sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi.html (file)
add(ok): sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi.html (file)
add(ok): sub-cIVs009_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi.html (file)
add(ok): sub-cIVs009_ses-s1Bx2_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215548_61355234-9606-496c-a4bb-e08fe55448e6.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs009_2025.10.09T23.55.47-4071289_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215548_61355234-9606-496c-a4bb-e08fe55448e6.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs009/figures/sub-cIVs009_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs009_ses-s1Bx2_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000655 seconds
flock: executing git
SUCCESS
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