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ds003416-mriqc/logs/sub-cIVs002_10066399.out
Felix Hoffstaedter bfde166847 add logs
2025-10-10 23:58:36 +02:00

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install(ok): /var/lib/condor/execute/dir_470336/ds (dataset)
install(ok): /var/lib/condor/execute/dir_470336/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_470336/ds/sourcedata/raw]
------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_470336/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 21:55:40 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 21:55:40 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:55:40 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
2025-10-09 21:55:41 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
2025-10-09 21:55:41 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
2025-10-09 21:55:41 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215538_4ec0d3a9-8264-440c-83e1-6f4c96023620.toml.
2025-10-09 21:55:45 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 21:55:46 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 21:55:47 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
2025-10-09 21:55:47 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 21:55:52 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 21:55:56 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 21:55:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/eb7ff43ae19c144f466990cad8c1f149757cdd08/conform".
2025-10-09 21:55:56 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 21:55:57 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.668248s.
2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/load_bmat".
2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:55:59 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.216584s.
2025-10-09 21:56:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/sanitize".
2025-10-09 21:56:00 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:01 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.767383s.
2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/provenance".
2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.017964s.
2025-10-09 21:56:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/load_bmat".
2025-10-09 21:56:03 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:03 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021969s.
2025-10-09 21:56:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/sanitize".
2025-10-09 21:56:04 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:05 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.771838s.
2025-10-09 21:56:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1811aed531a55468d10350d8f3a8217c627cd9f/provenance".
2025-10-09 21:56:06 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:06 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.018056s.
2025-10-09 21:56:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/load_bmat".
2025-10-09 21:56:07 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:07 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023686s.
2025-10-09 21:56:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/sanitize".
2025-10-09 21:56:08 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:09 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.988692s.
2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/485430fced5e1efcca74b5b6a38a43da65ade148/provenance".
2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.023326s.
2025-10-09 21:56:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/load_bmat".
2025-10-09 21:56:11 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
2025-10-09 21:56:11 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02358s.
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/sanitize".
2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.125259s.
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/955601fac91afb1044114e483cae3a8798be7fbb/provenance".
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 21:56:14 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.022956s.
2025-10-09 21:56:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/pre_clip".
2025-10-09 21:56:15 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 21:56:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 10.293635s.
2025-10-09 21:56:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/eb7ff43ae19c144f466990cad8c1f149757cdd08/RotationMask".
2025-10-09 21:56:26 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 21:56:28 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.111278s.
2025-10-09 21:56:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotMosaicNoise".
2025-10-09 21:56:28 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 21:56:33 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.030572s.
2025-10-09 21:56:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/shells".
2025-10-09 21:56:34 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:34 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000692s.
2025-10-09 21:56:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/piesno".
2025-10-09 21:56:36 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.961016s.
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/shells".
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000656s.
2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/piesno".
2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:41 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.960288s.
2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/shells".
2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000824s.
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/piesno".
2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.328148s.
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/shells".
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000717s.
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/piesno".
2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.288425s.
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/pre_n4".
2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 21:58:58 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 127.200474s.
2025-10-09 21:58:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_background".
2025-10-09 21:58:58 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009047s.
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/dwi_ref".
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:58:59 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.550419s.
2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/get_lowb".
2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:01 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.322625s.
2025-10-09 21:59:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/dwi_ref".
2025-10-09 21:59:03 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:03 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.507132s.
2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/get_lowb".
2025-10-09 21:59:05 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:05 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.465259s.
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/dwi_ref".
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:07 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.861043s.
2025-10-09 21:59:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/get_lowb".
2025-10-09 21:59:09 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:09 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.392415s.
2025-10-09 21:59:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/dwi_ref".
2025-10-09 21:59:11 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
2025-10-09 21:59:11 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.643122s.
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/get_lowb".
2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 21:59:13 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.509802s.
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/synthstrip".
2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:00:48 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 93.209712s.
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/pre_clip".
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.646071s.
2025-10-09 22:00:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/SharpenEPI".
2025-10-09 22:00:51 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:00:59 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.038938s.
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/hmc_b0".
2025-10-09 22:01:01 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:01:23 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.662856s.
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/pre_clip".
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:01:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.624824s.
2025-10-09 22:01:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/SharpenEPI".
2025-10-09 22:01:27 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:01:35 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.100725s.
2025-10-09 22:01:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/hmc_b0".
2025-10-09 22:01:37 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:01:59 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.483244s.
2025-10-09 22:02:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/pre_clip".
2025-10-09 22:02:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.62357s.
2025-10-09 22:02:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/SharpenEPI".
2025-10-09 22:02:03 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:11 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.996768s.
2025-10-09 22:02:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/hmc_b0".
2025-10-09 22:02:13 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:02:41 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.445907s.
2025-10-09 22:02:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/pre_clip".
2025-10-09 22:02:43 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:02:43 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.685903s.
2025-10-09 22:02:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/SharpenEPI".
2025-10-09 22:02:45 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:02:53 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.314671s.
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/hmc_b0".
2025-10-09 22:02:55 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:03:24 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 28.866952s.
2025-10-09 22:03:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/post_n4".
2025-10-09 22:03:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:03:51 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 26.368782s.
2025-10-09 22:03:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/eb7ff43ae19c144f466990cad8c1f149757cdd08/smoothness".
2025-10-09 22:03:53 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:03:57 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 4.7831399999999995s.
2025-10-09 22:03:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotMosaicZoomed".
2025-10-09 22:03:59 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:04:04 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.279721s.
2025-10-09 22:04:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotBrainmask".
2025-10-09 22:04:05 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:04:09 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.127059s.
2025-10-09 22:04:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/pre_n4".
2025-10-09 22:04:11 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.066642s.
2025-10-09 22:04:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/pre_n4".
2025-10-09 22:04:21 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:29 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.156762s.
2025-10-09 22:04:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/pre_n4".
2025-10-09 22:04:31 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:39 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.106311s.
2025-10-09 22:04:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/pre_n4".
2025-10-09 22:04:41 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:04:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.012267s.
2025-10-09 22:04:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/final_masked".
2025-10-09 22:04:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:04:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.307257s.
2025-10-09 22:04:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization".
2025-10-09 22:04:53 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:04:54 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:06:17 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:06:17 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:06:36 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:06:38 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:06:38 | INFO | niworkflows | Generating visual report
2025-10-09 22:06:57 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 124.601469s.
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_zoomed".
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005838s.
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_bmask".
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.006279s.
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/synthstrip".
2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:07:44 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 44.585805s.
2025-10-09 22:07:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/synthstrip".
2025-10-09 22:07:45 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:08:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 45.006558s.
2025-10-09 22:08:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/synthstrip".
2025-10-09 22:08:31 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:09:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.057715s.
2025-10-09 22:09:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/synthstrip".
2025-10-09 22:09:19 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:10:07 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.220935s.
2025-10-09 22:10:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_norm".
2025-10-09 22:10:09 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:10:09 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005533s.
2025-10-09 22:10:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/post_n4".
2025-10-09 22:10:09 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:10:12 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.5343809999999998s.
2025-10-09 22:10:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/sp_mask".
2025-10-09 22:10:13 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:10:14 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.716321s.
2025-10-09 22:10:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/drift".
2025-10-09 22:10:15 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:10:15 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0014, 1.0008, 1.001, 0.9992, 0.9947, 1.0025.
2025-10-09 22:10:17 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.748367s.
2025-10-09 22:10:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/EPI2MNI".
2025-10-09 22:10:17 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:10:17 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:10:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/EPI2MNI/stderr.nipype-init).
2025-10-09 22:10:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:10:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:12:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:12:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:12:08 | INFO | niworkflows | Generating visual report
2025-10-09 22:12:28 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 131.193603s.
2025-10-09 22:12:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/post_n4".
2025-10-09 22:12:29 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:12:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.511087s.
2025-10-09 22:12:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/sp_mask".
2025-10-09 22:12:33 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:12:34 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.743546s.
2025-10-09 22:12:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/drift".
2025-10-09 22:12:35 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:12:35 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0003, 0.9874, 1.0025, 1.0008, 0.9956, 1.0002.
2025-10-09 22:12:37 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.651814s.
2025-10-09 22:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/EPI2MNI".
2025-10-09 22:12:37 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:12:37 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:13:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:13:10 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:14:28 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:14:28 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:14:28 | INFO | niworkflows | Generating visual report
2025-10-09 22:14:46 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 129.073757s.
2025-10-09 22:14:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/post_n4".
2025-10-09 22:14:47 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:14:49 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.434585s.
2025-10-09 22:14:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/sp_mask".
2025-10-09 22:14:51 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:14:52 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.871121s.
2025-10-09 22:14:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/drift".
2025-10-09 22:14:53 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:14:53 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9986, 0.9978, 1.0036, 0.9991, 0.997, 0.9938, 0.9957, 1.0003.
2025-10-09 22:14:55 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.027088s.
2025-10-09 22:14:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/EPI2MNI".
2025-10-09 22:14:57 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:14:57 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:15:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:15:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:16:44 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:16:44 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:16:44 | INFO | niworkflows | Generating visual report
2025-10-09 22:17:03 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.132363s.
2025-10-09 22:17:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/post_n4".
2025-10-09 22:17:05 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:17:07 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.421397s.
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/sp_mask".
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
2025-10-09 22:17:10 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.896156s.
2025-10-09 22:17:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/drift".
2025-10-09 22:17:11 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
2025-10-09 22:17:11 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9943, 0.9912, 0.9946, 0.986, 0.9898, 0.9867, 0.9865, 0.9966.
2025-10-09 22:17:13 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.144029s.
2025-10-09 22:17:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/EPI2MNI".
2025-10-09 22:17:15 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:17:15 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:17:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:17:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/SharpenEPI/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:19:04 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:19:04 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:19:04 | INFO | niworkflows | Generating visual report
2025-10-09 22:19:24 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.633235s.
2025-10-09 22:19:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/final_masked".
2025-10-09 22:19:25 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:19:25 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.061978s.
2025-10-09 22:19:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/dwidenoise".
2025-10-09 22:19:27 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:19:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 20.940597s.
2025-10-09 22:19:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ResampleSegmentation".
2025-10-09 22:19:49 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:19:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.672962s.
2025-10-09 22:19:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/final_masked".
2025-10-09 22:19:53 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:19:53 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.03849s.
2025-10-09 22:19:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/dwidenoise".
2025-10-09 22:19:55 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:20:16 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 20.917207s.
2025-10-09 22:20:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b1811aed531a55468d10350d8f3a8217c627cd9f/ResampleSegmentation".
2025-10-09 22:20:17 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.753797s.
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/485430fced5e1efcca74b5b6a38a43da65ade148/final_masked".
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.036818s.
2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/dwidenoise".
2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:21:01 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 37.909608s.
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/485430fced5e1efcca74b5b6a38a43da65ade148/ResampleSegmentation".
2025-10-09 22:21:03 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:21:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.823638s.
2025-10-09 22:21:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/955601fac91afb1044114e483cae3a8798be7fbb/final_masked".
2025-10-09 22:21:09 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:21:09 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037357s.
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/dwidenoise".
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
2025-10-09 22:21:50 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 38.593562s.
2025-10-09 22:21:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/955601fac91afb1044114e483cae3a8798be7fbb/ResampleSegmentation".
2025-10-09 22:21:51 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 22:21:55 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.7225960000000002s.
2025-10-09 22:21:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/dwimodel".
2025-10-09 22:21:55 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:21:59 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.908464s.
2025-10-09 22:22:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/estimate_sigma".
2025-10-09 22:22:01 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:01 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.042438s.
2025-10-09 22:22:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/get_wm".
2025-10-09 22:22:03 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:03 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.041251s.
2025-10-09 22:22:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/dwimodel".
2025-10-09 22:22:05 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:22:09 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.86478s.
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1811aed531a55468d10350d8f3a8217c627cd9f/estimate_sigma".
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.055665s.
2025-10-09 22:22:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/get_wm".
2025-10-09 22:22:13 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:13 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.040597s.
2025-10-09 22:22:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/dwimodel".
2025-10-09 22:22:15 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:22:20 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.363028s.
2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/485430fced5e1efcca74b5b6a38a43da65ade148/estimate_sigma".
2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.043575s.
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/get_wm".
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:23 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.042656s.
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/dwimodel".
2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
2025-10-09 22:22:29 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.30243s.
2025-10-09 22:22:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/955601fac91afb1044114e483cae3a8798be7fbb/estimate_sigma".
2025-10-09 22:22:31 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:31 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.076141s.
2025-10-09 22:22:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/get_wm".
2025-10-09 22:22:33 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:22:33 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.040731s.
2025-10-09 22:22:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/cc_mask".
2025-10-09 22:22:35 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:22:36 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.669854s.
2025-10-09 22:22:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_fa".
2025-10-09 22:22:37 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:22:39 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.775876s.
2025-10-09 22:22:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_md".
2025-10-09 22:22:39 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:22:41 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.074907s.
2025-10-09 22:22:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/plot_heatmap".
2025-10-09 22:22:43 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:22:45 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.400012s.
2025-10-09 22:22:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/cc_mask".
2025-10-09 22:22:45 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:22:46 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.595359s.
2025-10-09 22:22:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_fa".
2025-10-09 22:22:47 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:22:49 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.893038s.
2025-10-09 22:22:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_md".
2025-10-09 22:22:51 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:22:53 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.059792s.
2025-10-09 22:22:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/plot_heatmap".
2025-10-09 22:22:55 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:22:57 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.4653800000000001s.
2025-10-09 22:22:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/cc_mask".
2025-10-09 22:22:57 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:22:58 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.638491s.
2025-10-09 22:22:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_fa".
2025-10-09 22:22:59 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:23:01 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.827508s.
2025-10-09 22:23:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_md".
2025-10-09 22:23:01 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:23:03 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.257813s.
2025-10-09 22:23:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/plot_heatmap".
2025-10-09 22:23:05 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:23:07 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.405892s.
2025-10-09 22:23:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/cc_mask".
2025-10-09 22:23:07 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
2025-10-09 22:23:08 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.582024s.
2025-10-09 22:23:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_fa".
2025-10-09 22:23:09 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.804861s.
2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_md".
2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:23:13 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 2.059977s.
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/plot_heatmap".
2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.522545s.
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_fa".
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005551s.
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_md".
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005415s.
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_hm".
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.0055s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_fa".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005783s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_md".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.00541s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_hm".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005255s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_fa".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005322s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_md".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005367s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_hm".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005386s.
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_fa".
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005268s.
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_md".
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005249s.
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_hm".
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005356s.
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:23:19 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:23:28 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 9.306551s.
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:23:38 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 9.26208s.
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:23:39 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 9.328844s.
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/eb7ff43ae19c144f466990cad8c1f149757cdd08/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 22:23:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/eb7ff43ae19c144f466990cad8c1f149757cdd08/Enhance".
2025-10-09 22:23:51 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:52 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.686031s.
2025-10-09 22:23:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/eb7ff43ae19c144f466990cad8c1f149757cdd08/format_tpm_names".
2025-10-09 22:23:53 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:23:55 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.92884s.
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/eb7ff43ae19c144f466990cad8c1f149757cdd08/Grad".
2025-10-09 22:23:57 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 7.52477s.
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/eb7ff43ae19c144f466990cad8c1f149757cdd08/apply_mask".
2025-10-09 22:24:05 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:24:06 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.350694s.
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/eb7ff43ae19c144f466990cad8c1f149757cdd08/GradientThreshold".
2025-10-09 22:24:07 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:24:24 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 17.294791s.
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/eb7ff43ae19c144f466990cad8c1f149757cdd08/segmentation".
2025-10-09 22:24:25 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 22:26:00 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 94.824867s.
2025-10-09 22:26:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/eb7ff43ae19c144f466990cad8c1f149757cdd08/ArtifactMask".
2025-10-09 22:26:01 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 22:26:08 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.703605s.
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotHeadmask".
2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.347256s.
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/eb7ff43ae19c144f466990cad8c1f149757cdd08/harmonize".
2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.171178s.
2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotSegmentation".
2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.845814s.
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/eb7ff43ae19c144f466990cad8c1f149757cdd08/provenance".
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.064093s.
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/eb7ff43ae19c144f466990cad8c1f149757cdd08/ComputeQI2".
2025-10-09 22:26:19 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 22:26:30 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.858584s.
2025-10-09 22:26:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotAirmask".
2025-10-09 22:26:31 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 3.488227s.
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/PlotArtmask".
2025-10-09 22:26:35 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 3.293231s.
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_headmask".
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.005344s.
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/eb7ff43ae19c144f466990cad8c1f149757cdd08/measures".
2025-10-09 22:26:39 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 22:26:44 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.2222)
2025-10-09 22:26:44 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.2222)
2025-10-09 22:26:44 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.2222)
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 11.432569s.
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_segm".
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004878s.
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_noisefit".
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:51 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004863s.
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_airmask".
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004829s.
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/eb7ff43ae19c144f466990cad8c1f149757cdd08/ds_report_artmask".
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004874s.
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/eb7ff43ae19c144f466990cad8c1f149757cdd08/datasink".
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00053s.
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/averages/mapflow/_averages0".
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:26:52 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.283696s.
2025-10-09 22:26:53 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/averages/mapflow/_averages1".
2025-10-09 22:26:53 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.291739s.
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/averages/mapflow/_averages0".
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/averages/mapflow/_averages1".
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/motion_correct".
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 196.470948s.
2025-10-09 22:30:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ComputeFD".
2025-10-09 22:30:15 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:30:15 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00126s.
2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/bvec_rot".
2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.016599s.
2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/stddev/mapflow/_stddev0".
2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.446115s.
2025-10-09 22:30:21 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/stddev/mapflow/_stddev1".
2025-10-09 22:30:21 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:22 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.416204s.
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/stddev/mapflow/_stddev0".
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/stddev/mapflow/_stddev1".
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:30:25 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/averages/mapflow/_averages0".
2025-10-09 22:30:25 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.288151s.
2025-10-09 22:30:27 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/averages/mapflow/_averages1".
2025-10-09 22:30:27 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:30:28 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.294362s.
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/averages/mapflow/_averages0".
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/averages/mapflow/_averages1".
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:30:29 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:30:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b1811aed531a55468d10350d8f3a8217c627cd9f/motion_correct".
2025-10-09 22:30:31 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:33:45 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 193.867782s.
2025-10-09 22:33:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b1811aed531a55468d10350d8f3a8217c627cd9f/ComputeFD".
2025-10-09 22:33:45 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:33:45 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004341s.
2025-10-09 22:33:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b1811aed531a55468d10350d8f3a8217c627cd9f/bvec_rot".
2025-10-09 22:33:47 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:33:47 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.017174s.
2025-10-09 22:33:49 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/stddev/mapflow/_stddev0".
2025-10-09 22:33:49 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:50 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.410577s.
2025-10-09 22:33:51 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/stddev/mapflow/_stddev1".
2025-10-09 22:33:51 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:52 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.404007s.
2025-10-09 22:33:53 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/stddev/mapflow/_stddev0".
2025-10-09 22:33:53 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:33:53 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:33:53 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/stddev/mapflow/_stddev1".
2025-10-09 22:33:53 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:33:53 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:33:55 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/averages/mapflow/_averages0".
2025-10-09 22:33:55 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.381495s.
2025-10-09 22:33:57 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/averages/mapflow/_averages1".
2025-10-09 22:33:57 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:33:58 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.362629s.
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/averages/mapflow/_averages0".
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/averages/mapflow/_averages1".
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:33:59 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:34:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/485430fced5e1efcca74b5b6a38a43da65ade148/motion_correct".
2025-10-09 22:34:01 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 276.308273s.
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/485430fced5e1efcca74b5b6a38a43da65ade148/ComputeFD".
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005566s.
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/485430fced5e1efcca74b5b6a38a43da65ade148/bvec_rot".
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.020891s.
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/stddev/mapflow/_stddev0".
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.610973s.
2025-10-09 22:38:46 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/stddev/mapflow/_stddev1".
2025-10-09 22:38:46 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:46 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.59191s.
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/stddev/mapflow/_stddev0".
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/stddev/mapflow/_stddev1".
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:38:48 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/averages/mapflow/_averages0".
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.397858s.
2025-10-09 22:38:52 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/averages/mapflow/_averages1".
2025-10-09 22:38:52 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:38:52 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.400564s.
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/averages/mapflow/_averages0".
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] "_averages0" found cached.
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/averages/mapflow/_averages1".
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] "_averages1" found cached.
2025-10-09 22:38:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/955601fac91afb1044114e483cae3a8798be7fbb/motion_correct".
2025-10-09 22:38:56 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:39 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 283.074163s.
2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/955601fac91afb1044114e483cae3a8798be7fbb/ComputeFD".
2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001394s.
2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/955601fac91afb1044114e483cae3a8798be7fbb/bvec_rot".
2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.019639s.
2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/stddev/mapflow/_stddev0".
2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.552917s.
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/stddev/mapflow/_stddev1".
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.568117s.
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/stddev/mapflow/_stddev0".
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/stddev/mapflow/_stddev1".
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
2025-10-09 22:43:50 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:43:50 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.448222s.
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.543337s.
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:43:56 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:43:56 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.1372309999999999s.
2025-10-09 22:43:58 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:43:58 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:44:01 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.599675s.
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/measures".
2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.034118s.
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/datasink".
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000729s.
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:10 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/stddev/mapflow/_stddev0/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/averages/mapflow/_averages0/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:10 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:28 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.775871s.
2025-10-09 22:44:30 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:30 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:44:30 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/stddev/mapflow/_stddev1/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/averages/mapflow/_averages1/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:44:30 | INFO | nipype.interface | Generating visual report
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 20.164366s.
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.526251s.
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.65954s.
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.195471s.
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.494981s.
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:45:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1811aed531a55468d10350d8f3a8217c627cd9f/measures".
2025-10-09 22:45:08 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:45:12 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.155656s.
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b1811aed531a55468d10350d8f3a8217c627cd9f/datasink".
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000503s.
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:14 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/stddev/mapflow/_stddev0/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/averages/mapflow/_averages0/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:14 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:32 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.888653s.
2025-10-09 22:45:34 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:34 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:45:34 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/stddev/mapflow/_stddev1/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/b1811aed531a55468d10350d8f3a8217c627cd9f/averages/mapflow/_averages1/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:45:34 | INFO | nipype.interface | Generating visual report
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 20.308388s.
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:45:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.5634350000000001s.
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.727909s.
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:46:04 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:04 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.499735s.
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.903126s.
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:46:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/485430fced5e1efcca74b5b6a38a43da65ade148/measures".
2025-10-09 22:46:14 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:46:19 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.356513s.
2025-10-09 22:46:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/485430fced5e1efcca74b5b6a38a43da65ade148/datasink".
2025-10-09 22:46:20 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:46:20 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000467s.
2025-10-09 22:46:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:46:20 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:20 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/stddev/mapflow/_stddev0/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/averages/mapflow/_averages0/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:20 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 19.442813s.
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:46:40 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/stddev/mapflow/_stddev1/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/485430fced5e1efcca74b5b6a38a43da65ade148/averages/mapflow/_averages1/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:46:40 | INFO | nipype.interface | Generating visual report
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.402332s.
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:47:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:02 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.513378s.
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.486844s.
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_noise/mapflow/_mosaic_noise0".
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_noise/mapflow/_mosaic_noise1".
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
2025-10-09 22:47:08 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:08 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:09 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.455715s.
2025-10-09 22:47:10 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:10 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
2025-10-09 22:47:14 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 4.682711s.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/get_hmc_shells/mapflow/_get_hmc_shells0".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/get_hmc_shells/mapflow/_get_hmc_shells1".
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/955601fac91afb1044114e483cae3a8798be7fbb/measures".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.483048s.
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/955601fac91afb1044114e483cae3a8798be7fbb/datasink".
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000491s.
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:24 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/stddev/mapflow/_stddev0/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/averages/mapflow/_averages0/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:24 | INFO | nipype.interface | Generating visual report
2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 17.366949s.
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
2025-10-09 22:47:42 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/stddev/mapflow/_stddev1/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/955601fac91afb1044114e483cae3a8798be7fbb/averages/mapflow/_averages1/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_nodriftfull_mean.nii.gz) images
2025-10-09 22:47:42 | INFO | nipype.interface | Generating visual report
2025-10-09 22:48:01 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 19.025058s.
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_snr/mapflow/_mosaic_snr0".
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/mosaic_snr/mapflow/_mosaic_snr1".
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
2025-10-09 22:48:02 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005309s.
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005519s.
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005626s.
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005336s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005219s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005563s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005573s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005707s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005462s.
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005443s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005279s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005378s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00534s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.005305s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005096s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004821s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005028s.
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1cc21917fdc7d2d9e8da615316e7e601ffcf71a/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004922s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004958s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004728s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.005119s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b1811aed531a55468d10350d8f3a8217c627cd9f/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004827s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.00515s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.010085s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004954s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/485430fced5e1efcca74b5b6a38a43da65ade148/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004615s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_noise/mapflow/_ds_report_noise0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.005025s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_noise/mapflow/_ds_report_noise1".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004709s.
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00524s.
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.00531s.
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_snr/mapflow/_ds_report_snr0".
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00522s.
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/955601fac91afb1044114e483cae3a8798be7fbb/ds_report_snr/mapflow/_ds_report_snr1".
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:48:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.005111s.
2025-10-09 22:48:10 | INFO | nipype.workflow | Generating reports...
2025-10-09 22:48:11 | INFO | nipype.workflow | Report generation finished (5 reports).
2025-10-09 22:48:11 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 10min 30s per subject.
2025-10-09 22:48:11 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 52min 33s).
----------------------------------------------------------------
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/anat/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-113_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-216_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.nii.gz (file) [from s3-PUBLIC...]
get(ok): sourcedata/raw/sub-cIVs002 (directory)
get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...]
run(ok): /var/lib/condor/execute/dir_470336/ds (dataset) [./code/containers/scripts/singularity_cm...]
add(ok): .bidsignore (file)
add(ok): dataset_description.json (file)
add(ok): logs/config-20251009-215538_4ec0d3a9-8264-440c-83e1-6f4c96023620.toml (file)
add(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_info.json (file)
add(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_stderr (file)
add(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_stdout (file)
add(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_usage.json (file)
add(ok): logs/mriqc-20251009-215538_4ec0d3a9-8264-440c-83e1-6f4c96023620.log (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-md_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-01000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-fa_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-md_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-fa_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_desc-md_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-avgstd_bval-02000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-00000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-background_bval-02000_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-fa_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-heatmap_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_desc-md_dwi.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-airmask_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-artifacts_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-background_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-brainmask_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-head_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-noisefit_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-norm_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-segmentation_T1w.svg (file)
add(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_desc-zoomed_T1w.svg (file)
add(ok): sub-cIVs002/ses-s1Bx2/anat/sub-cIVs002_ses-s1Bx2_acq-r10x10x10_T1w.json (file)
add(ok): sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.json (file)
add(ok): sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.json (file)
add(ok): sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.json (file)
add(ok): sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.json (file)
add(ok): sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.html (file)
add(ok): sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.html (file)
add(ok): sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.html (file)
add(ok): sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.html (file)
add(ok): sub-cIVs002_ses-s1Bx2_acq-r10x10x10_T1w.html (file)
save(ok): . (dataset)
action summary:
add (ok: 55)
get (notneeded: 4, ok: 9)
run (ok: 1)
save (notneeded: 2, ok: 1)
copy(ok): logs/config-20251009-215538_4ec0d3a9-8264-440c-83e1-6f4c96023620.toml (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_info.json (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_stderr (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_stdout (file) [to mriqc_out-storage...]
copy(ok): logs/duct/sub-cIVs002_2025.10.09T23.55.38-588586_usage.json (file) [to mriqc_out-storage...]
copy(ok): logs/mriqc-20251009-215538_4ec0d3a9-8264-440c-83e1-6f4c96023620.log (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-background_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-fa_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-heatmap_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_desc-md_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-avgstd_bval-01000_dwi.svg (file) [to mriqc_out-storage...]
copy(ok): sub-cIVs002/figures/sub-cIVs002_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_desc-background_bval-00000_dwi.svg (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs002/ses-s1Bx2/dwi/sub-cIVs002_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.json (file) [to mriqc_out-storage...]
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copy(ok): sub-cIVs002_ses-s1Bx2_acq-r10x10x10_T1w.html (file) [to mriqc_out-storage...]
action summary:
copy (ok: 53)
flock: getting lock took 0.000823 seconds
flock: executing git
SUCCESS
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