=== Do not change lines below ===
{
"chain": [],
"cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
"dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
"exit": 0,
"extra_inputs": [
"code/containers/images/bids/bids-mriqc--24.0.2.sing"
],
"inputs": [
"sourcedata/raw/sub-cIIIs07",
"sourcedata/raw/dataset_description.json"
],
"outputs": [],
"pwd": "."
}
^^^ Do not change lines above ^^^
982 lines
147 KiB
(Stored with Git Annex)
Text
982 lines
147 KiB
(Stored with Git Annex)
Text
------------------------------------------------------------------
|
|
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
|
|
----------------------------------------------------------------
|
|
|
|
NOTICE
|
|
Copyright © The NiPreps Developers.
|
|
|
|
This product includes software developed by
|
|
the NiPreps Community (https://nipreps.org/).
|
|
|
|
Portions of this software were developed at the Department of
|
|
Psychology at Stanford University, Stanford, CA, US.
|
|
|
|
This software contains code ultimately derived from the
|
|
PCP Quality Assessment Protocol (QAP;
|
|
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
|
|
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
|
|
|
|
This software is also distributed as a Docker container image.
|
|
The bootstrapping file for the image ("Dockerfile") is licensed
|
|
under the MIT License.
|
|
|
|
----------------------------------------------------------------
|
|
|
|
* BIDS dataset path: /var/lib/condor/execute/dir_2143515/ds/sourcedata/raw.
|
|
* Output folder: ..
|
|
* Analysis levels: ['participant'].
|
|
------------------------------------------------------------------
|
|
|
|
2025-10-09 22:12:20 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
|
|
2025-10-09 22:12:20 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
|
|
2025-10-09 22:12:20 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'dwi'...
|
|
2025-10-09 22:12:20 | WARNING | nipype.workflow | 2 cannot be processed (too short or too long)
|
|
2025-10-09 22:12:20 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average].
|
|
2025-10-09 22:12:20 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-221219_09a6b87a-d3b9-412a-8d0e-8ebc05b2a5e0.toml.
|
|
2025-10-09 22:12:24 | INFO | matplotlib.font_manager | generated new fontManager
|
|
2025-10-09 22:12:25 | IMPORTANT | mriqc | Building MRIQC's workflows...
|
|
2025-10-09 22:12:25 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 4 NIfTI files..
|
|
2025-10-09 22:12:26 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
|
|
2025-10-09 22:12:29 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
|
|
2025-10-09 22:12:33 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
|
|
2025-10-09 22:12:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/55958dc169743fd6d666b6d641859b94524961c5/conform".
|
|
2025-10-09 22:12:33 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
|
|
2025-10-09 22:12:33 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.338145s.
|
|
2025-10-09 22:12:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/load_bmat".
|
|
2025-10-09 22:12:35 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
|
|
2025-10-09 22:12:35 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.152789s.
|
|
2025-10-09 22:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/sanitize".
|
|
2025-10-09 22:12:37 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
|
|
2025-10-09 22:12:38 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.567337s.
|
|
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/provenance".
|
|
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
|
|
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.01607s.
|
|
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/load_bmat".
|
|
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
|
|
2025-10-09 22:12:39 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.019722s.
|
|
2025-10-09 22:12:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/sanitize".
|
|
2025-10-09 22:12:41 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
|
|
2025-10-09 22:12:42 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.560491s.
|
|
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/dfe2c252c30065623ce89c4a7e586a1a79e821a7/provenance".
|
|
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
|
|
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.016103s.
|
|
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/load_bmat".
|
|
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
|
|
2025-10-09 22:12:43 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021228s.
|
|
2025-10-09 22:12:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/sanitize".
|
|
2025-10-09 22:12:45 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
|
|
2025-10-09 22:12:46 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.80895s.
|
|
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0b99493ed2634281f17793dd6f27ff8a86e1c794/provenance".
|
|
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
|
|
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020307s.
|
|
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/load_bmat".
|
|
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Executing "load_bmat" <mriqc.interfaces.diffusion.ReadDWIMetadata>
|
|
2025-10-09 22:12:47 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020525s.
|
|
2025-10-09 22:12:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/sanitize".
|
|
2025-10-09 22:12:49 | INFO | nipype.workflow | [Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
|
|
2025-10-09 22:12:50 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.765569s.
|
|
2025-10-09 22:12:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/584404c66e2dfa29edee927fc6af204539292f42/provenance".
|
|
2025-10-09 22:12:51 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
|
|
2025-10-09 22:12:51 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020063s.
|
|
2025-10-09 22:12:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip".
|
|
2025-10-09 22:12:51 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
|
|
2025-10-09 22:12:59 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.636172s.
|
|
2025-10-09 22:12:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/RotationMask".
|
|
2025-10-09 22:12:59 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
|
|
2025-10-09 22:13:00 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.723066s.
|
|
2025-10-09 22:13:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotMosaicNoise".
|
|
2025-10-09 22:13:01 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:13:05 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.92836s.
|
|
2025-10-09 22:13:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/shells".
|
|
2025-10-09 22:13:07 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
|
|
2025-10-09 22:13:07 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000806s.
|
|
2025-10-09 22:13:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/piesno".
|
|
2025-10-09 22:13:09 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
|
|
2025-10-09 22:13:10 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.724057s.
|
|
2025-10-09 22:13:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/shells".
|
|
2025-10-09 22:13:11 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
|
|
2025-10-09 22:13:11 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000622s.
|
|
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/piesno".
|
|
2025-10-09 22:13:13 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
|
|
2025-10-09 22:13:14 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.77955s.
|
|
2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/shells".
|
|
2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
|
|
2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.005804s.
|
|
2025-10-09 22:13:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/piesno".
|
|
2025-10-09 22:13:17 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
|
|
2025-10-09 22:13:18 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.968366s.
|
|
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/shells".
|
|
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Executing "shells" <mriqc.interfaces.diffusion.NumberOfShells>
|
|
2025-10-09 22:13:19 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000614s.
|
|
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/piesno".
|
|
2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Executing "piesno" <mriqc.interfaces.diffusion.PIESNO>
|
|
2025-10-09 22:13:22 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.934533s.
|
|
2025-10-09 22:13:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_n4".
|
|
2025-10-09 22:13:23 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 105.359538s.
|
|
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_background".
|
|
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.006901s.
|
|
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref".
|
|
2025-10-09 22:15:09 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
|
|
2025-10-09 22:15:10 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.373692s.
|
|
2025-10-09 22:15:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/get_lowb".
|
|
2025-10-09 22:15:11 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:15:11 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.240363s.
|
|
2025-10-09 22:15:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref".
|
|
2025-10-09 22:15:13 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
|
|
2025-10-09 22:15:14 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.376843s.
|
|
2025-10-09 22:15:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/get_lowb".
|
|
2025-10-09 22:15:15 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:15:15 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.244734s.
|
|
2025-10-09 22:15:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref".
|
|
2025-10-09 22:15:17 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
|
|
2025-10-09 22:15:18 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.481043s.
|
|
2025-10-09 22:15:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/get_lowb".
|
|
2025-10-09 22:15:19 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.32112s.
|
|
2025-10-09 22:15:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwi_ref".
|
|
2025-10-09 22:15:21 | INFO | nipype.workflow | [Node] Executing "dwi_ref" <niworkflows.interfaces.images.RobustAverage>
|
|
2025-10-09 22:15:22 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.506048s.
|
|
2025-10-09 22:15:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/get_lowb".
|
|
2025-10-09 22:15:23 | INFO | nipype.workflow | [Node] Executing "get_lowb" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:15:24 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.346649s.
|
|
2025-10-09 22:15:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip".
|
|
2025-10-09 22:15:25 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
|
|
2025-10-09 22:16:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 45.890914s.
|
|
2025-10-09 22:16:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_clip".
|
|
2025-10-09 22:16:11 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
|
|
2025-10-09 22:16:12 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.487196s.
|
|
2025-10-09 22:16:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI".
|
|
2025-10-09 22:16:13 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:16:19 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.945363s.
|
|
2025-10-09 22:16:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/hmc_b0".
|
|
2025-10-09 22:16:21 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:16:34 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 13.258153s.
|
|
2025-10-09 22:16:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_clip".
|
|
2025-10-09 22:16:35 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
|
|
2025-10-09 22:16:36 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.451579s.
|
|
2025-10-09 22:16:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI".
|
|
2025-10-09 22:16:37 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:16:43 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.987693s.
|
|
2025-10-09 22:16:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/hmc_b0".
|
|
2025-10-09 22:16:45 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:16:58 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 13.20036s.
|
|
2025-10-09 22:16:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_clip".
|
|
2025-10-09 22:16:59 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
|
|
2025-10-09 22:17:00 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.487419s.
|
|
2025-10-09 22:17:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI".
|
|
2025-10-09 22:17:01 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:17:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.038557s.
|
|
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/hmc_b0".
|
|
2025-10-09 22:17:09 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:17:26 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 17.097547s.
|
|
2025-10-09 22:17:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_clip".
|
|
2025-10-09 22:17:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
|
|
2025-10-09 22:17:28 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.446694s.
|
|
2025-10-09 22:17:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI".
|
|
2025-10-09 22:17:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:17:35 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 6.003073s.
|
|
2025-10-09 22:17:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/hmc_b0".
|
|
2025-10-09 22:17:37 | INFO | nipype.workflow | [Node] Executing "hmc_b0" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:17:54 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 16.903012s.
|
|
2025-10-09 22:17:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/post_n4".
|
|
2025-10-09 22:17:55 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:18:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 20.63912s.
|
|
2025-10-09 22:18:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/55958dc169743fd6d666b6d641859b94524961c5/smoothness".
|
|
2025-10-09 22:18:17 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
|
|
2025-10-09 22:18:21 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.337465s.
|
|
2025-10-09 22:18:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotMosaicZoomed".
|
|
2025-10-09 22:18:21 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:18:25 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.859982s.
|
|
2025-10-09 22:18:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotBrainmask".
|
|
2025-10-09 22:18:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
|
|
2025-10-09 22:18:28 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.572213s.
|
|
2025-10-09 22:18:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_n4".
|
|
2025-10-09 22:18:29 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:18:35 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.98584s.
|
|
2025-10-09 22:18:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_n4".
|
|
2025-10-09 22:18:37 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:18:43 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.94982s.
|
|
2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_n4".
|
|
2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:18:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.996136s.
|
|
2025-10-09 22:18:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_n4".
|
|
2025-10-09 22:18:53 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:18:59 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 6.004179s.
|
|
2025-10-09 22:19:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/final_masked".
|
|
2025-10-09 22:19:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
|
|
2025-10-09 22:19:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.23344s.
|
|
2025-10-09 22:19:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization".
|
|
2025-10-09 22:19:03 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
|
|
2025-10-09 22:19:04 | INFO | niworkflows | Estimating initial transform using AffineInitializer
|
|
2025-10-09 22:19:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
|
|
2025-10-09 22:19:50 | INFO | niworkflows | Retry #1, commandline:
|
|
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
|
|
2025-10-09 22:20:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
|
|
2025-10-09 22:20:02 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
|
|
2025-10-09 22:20:02 | INFO | niworkflows | Generating visual report
|
|
2025-10-09 22:20:14 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 70.332197s.
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_zoomed".
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003834s.
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_bmask".
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003919s.
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip".
|
|
2025-10-09 22:20:15 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
|
|
2025-10-09 22:20:43 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 27.058115s.
|
|
2025-10-09 22:20:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip".
|
|
2025-10-09 22:20:43 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
|
|
2025-10-09 22:21:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 27.013727s.
|
|
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip".
|
|
2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
|
|
2025-10-09 22:21:39 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 27.20062s.
|
|
2025-10-09 22:21:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip".
|
|
2025-10-09 22:21:39 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
|
|
2025-10-09 22:22:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 27.02117s.
|
|
2025-10-09 22:22:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_norm".
|
|
2025-10-09 22:22:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:22:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003832s.
|
|
2025-10-09 22:22:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/post_n4".
|
|
2025-10-09 22:22:07 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:22:09 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.835619s.
|
|
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/sp_mask".
|
|
2025-10-09 22:22:11 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
|
|
2025-10-09 22:22:12 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.509227s.
|
|
2025-10-09 22:22:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/drift".
|
|
2025-10-09 22:22:13 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
|
|
2025-10-09 22:22:13 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0016, 1.0018, 1.0073, 1.0068, 1.0058, 0.9955.
|
|
2025-10-09 22:22:14 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.107513s.
|
|
2025-10-09 22:22:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI".
|
|
2025-10-09 22:22:15 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
|
|
2025-10-09 22:22:15 | INFO | niworkflows | Estimating initial transform using AffineInitializer
|
|
2025-10-09 22:22:35 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
|
|
2025-10-09 22:22:35 | INFO | niworkflows | Retry #1, commandline:
|
|
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
|
|
2025-10-09 22:23:31 | INFO | niworkflows | Successful spatial normalization (retry #1).
|
|
2025-10-09 22:23:31 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/epi_to_mni_Warped.nii.gz) images
|
|
2025-10-09 22:23:31 | INFO | niworkflows | Generating visual report
|
|
2025-10-09 22:23:43 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.348382s.
|
|
2025-10-09 22:23:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/post_n4".
|
|
2025-10-09 22:23:43 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.888142s.
|
|
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/sp_mask".
|
|
2025-10-09 22:23:45 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
|
|
2025-10-09 22:23:46 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.514869s.
|
|
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/drift".
|
|
2025-10-09 22:23:47 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
|
|
2025-10-09 22:23:48 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0009, 1.0001, 1.0069, 1.0075, 0.9906, 0.9952.
|
|
2025-10-09 22:23:48 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.108343s.
|
|
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI".
|
|
2025-10-09 22:23:49 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
|
|
2025-10-09 22:23:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
|
|
2025-10-09 22:24:11 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/stderr.nipype-init).
|
|
2025-10-09 22:24:11 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
|
|
2025-10-09 22:24:11 | INFO | niworkflows | Retry #1, commandline:
|
|
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
|
|
2025-10-09 22:25:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
|
|
2025-10-09 22:25:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/epi_to_mni_Warped.nii.gz) images
|
|
2025-10-09 22:25:08 | INFO | niworkflows | Generating visual report
|
|
2025-10-09 22:25:19 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.975181s.
|
|
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/post_n4".
|
|
2025-10-09 22:25:21 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.878873s.
|
|
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/sp_mask".
|
|
2025-10-09 22:25:23 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
|
|
2025-10-09 22:25:24 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.698393s.
|
|
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/drift".
|
|
2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
|
|
2025-10-09 22:25:26 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0035, 1.0032, 1.0095, 1.0086, 1.0135, 1.0146, 1.0175, 0.994.
|
|
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.415492s.
|
|
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI".
|
|
2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
|
|
2025-10-09 22:25:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer
|
|
2025-10-09 22:25:48 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/stderr.nipype-init).
|
|
2025-10-09 22:25:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
|
|
2025-10-09 22:25:48 | INFO | niworkflows | Retry #1, commandline:
|
|
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
|
|
2025-10-09 22:26:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
|
|
2025-10-09 22:26:43 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/epi_to_mni_Warped.nii.gz) images
|
|
2025-10-09 22:26:43 | INFO | niworkflows | Generating visual report
|
|
2025-10-09 22:26:54 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.019686s.
|
|
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/post_n4".
|
|
2025-10-09 22:26:55 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
|
|
2025-10-09 22:26:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.906839s.
|
|
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/sp_mask".
|
|
2025-10-09 22:26:59 | INFO | nipype.workflow | [Node] Executing "sp_mask" <mriqc.interfaces.diffusion.SpikingVoxelsMask>
|
|
2025-10-09 22:27:00 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.656576s.
|
|
2025-10-09 22:27:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/drift".
|
|
2025-10-09 22:27:01 | INFO | nipype.workflow | [Node] Executing "drift" <mriqc.interfaces.diffusion.CorrectSignalDrift>
|
|
2025-10-09 22:27:02 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0046, 1.0043, 1.0125, 1.0109, 1.0139, 1.0149, 1.017, 0.9955.
|
|
2025-10-09 22:27:03 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.425349s.
|
|
2025-10-09 22:27:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI".
|
|
2025-10-09 22:27:03 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
|
|
2025-10-09 22:27:03 | INFO | niworkflows | Estimating initial transform using AffineInitializer
|
|
2025-10-09 22:27:23 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
|
|
2025-10-09 22:27:23 | INFO | niworkflows | Retry #1, commandline:
|
|
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
|
|
2025-10-09 22:28:20 | INFO | niworkflows | Successful spatial normalization (retry #1).
|
|
2025-10-09 22:28:20 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI/epi_to_mni_Warped.nii.gz) images
|
|
2025-10-09 22:28:20 | INFO | niworkflows | Generating visual report
|
|
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.642024s.
|
|
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/final_masked".
|
|
2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
|
|
2025-10-09 22:28:32 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027081s.
|
|
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwidenoise".
|
|
2025-10-09 22:28:33 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
|
|
2025-10-09 22:28:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 14.927258s.
|
|
2025-10-09 22:28:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ResampleSegmentation".
|
|
2025-10-09 22:28:49 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
|
|
2025-10-09 22:28:52 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.821851s.
|
|
2025-10-09 22:28:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/final_masked".
|
|
2025-10-09 22:28:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
|
|
2025-10-09 22:28:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028698s.
|
|
2025-10-09 22:28:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwidenoise".
|
|
2025-10-09 22:28:56 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
|
|
2025-10-09 22:29:10 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 14.781582s.
|
|
2025-10-09 22:29:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ResampleSegmentation".
|
|
2025-10-09 22:29:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
|
|
2025-10-09 22:29:14 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.706273s.
|
|
2025-10-09 22:29:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/final_masked".
|
|
2025-10-09 22:29:15 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
|
|
2025-10-09 22:29:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025809s.
|
|
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwidenoise".
|
|
2025-10-09 22:29:18 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
|
|
2025-10-09 22:29:44 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 26.338666s.
|
|
2025-10-09 22:29:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/ResampleSegmentation".
|
|
2025-10-09 22:29:46 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
|
|
2025-10-09 22:29:48 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.673829s.
|
|
2025-10-09 22:29:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/final_masked".
|
|
2025-10-09 22:29:50 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
|
|
2025-10-09 22:29:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025794s.
|
|
2025-10-09 22:29:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwidenoise".
|
|
2025-10-09 22:29:52 | INFO | nipype.workflow | [Node] Executing "dwidenoise" <nipype.interfaces.mrtrix3.preprocess.DWIDenoise>
|
|
2025-10-09 22:30:18 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 26.412834s.
|
|
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/ResampleSegmentation".
|
|
2025-10-09 22:30:20 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
|
|
2025-10-09 22:30:22 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.6827069999999997s.
|
|
2025-10-09 22:30:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwimodel".
|
|
2025-10-09 22:30:24 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
|
|
2025-10-09 22:30:26 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.730642s.
|
|
2025-10-09 22:30:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/estimate_sigma".
|
|
2025-10-09 22:30:28 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:28 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.027982s.
|
|
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/get_wm".
|
|
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:30 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.027592s.
|
|
2025-10-09 22:30:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwimodel".
|
|
2025-10-09 22:30:32 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
|
|
2025-10-09 22:30:34 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.69498s.
|
|
2025-10-09 22:30:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/dfe2c252c30065623ce89c4a7e586a1a79e821a7/estimate_sigma".
|
|
2025-10-09 22:30:36 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:36 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.028216s.
|
|
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/get_wm".
|
|
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:38 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.027383s.
|
|
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwimodel".
|
|
2025-10-09 22:30:40 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
|
|
2025-10-09 22:30:43 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.044278s.
|
|
2025-10-09 22:30:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0b99493ed2634281f17793dd6f27ff8a86e1c794/estimate_sigma".
|
|
2025-10-09 22:30:44 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:44 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.052287s.
|
|
2025-10-09 22:30:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/get_wm".
|
|
2025-10-09 22:30:46 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:46 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.027627s.
|
|
2025-10-09 22:30:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwimodel".
|
|
2025-10-09 22:30:48 | INFO | nipype.workflow | [Node] Executing "dwimodel" <mriqc.interfaces.diffusion.DiffusionModel>
|
|
2025-10-09 22:30:51 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.13791s.
|
|
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/584404c66e2dfa29edee927fc6af204539292f42/estimate_sigma".
|
|
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Executing "estimate_sigma" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:52 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.030068s.
|
|
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/get_wm".
|
|
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Executing "get_wm" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:30:54 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.027576s.
|
|
2025-10-09 22:30:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/cc_mask".
|
|
2025-10-09 22:30:56 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
|
|
2025-10-09 22:30:56 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.371947s.
|
|
2025-10-09 22:30:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_fa".
|
|
2025-10-09 22:30:58 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:30:59 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.094845s.
|
|
2025-10-09 22:31:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_md".
|
|
2025-10-09 22:31:00 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:01 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.318837s.
|
|
2025-10-09 22:31:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/plot_heatmap".
|
|
2025-10-09 22:31:02 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
|
|
2025-10-09 22:31:02 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.787602s.
|
|
2025-10-09 22:31:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/cc_mask".
|
|
2025-10-09 22:31:04 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
|
|
2025-10-09 22:31:04 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.364788s.
|
|
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_fa".
|
|
2025-10-09 22:31:06 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:07 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.214973s.
|
|
2025-10-09 22:31:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_md".
|
|
2025-10-09 22:31:08 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:09 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.355824s.
|
|
2025-10-09 22:31:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/plot_heatmap".
|
|
2025-10-09 22:31:10 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
|
|
2025-10-09 22:31:10 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.795203s.
|
|
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/cc_mask".
|
|
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
|
|
2025-10-09 22:31:12 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.362758s.
|
|
2025-10-09 22:31:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_fa".
|
|
2025-10-09 22:31:14 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:15 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.18864s.
|
|
2025-10-09 22:31:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_md".
|
|
2025-10-09 22:31:16 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:17 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.299413s.
|
|
2025-10-09 22:31:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/plot_heatmap".
|
|
2025-10-09 22:31:18 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
|
|
2025-10-09 22:31:18 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.847839s.
|
|
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/cc_mask".
|
|
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Executing "cc_mask" <mriqc.interfaces.diffusion.CCSegmentation>
|
|
2025-10-09 22:31:20 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.362359s.
|
|
2025-10-09 22:31:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_fa".
|
|
2025-10-09 22:31:22 | INFO | nipype.workflow | [Node] Executing "mosaic_fa" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:23 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.173459s.
|
|
2025-10-09 22:31:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_md".
|
|
2025-10-09 22:31:24 | INFO | nipype.workflow | [Node] Executing "mosaic_md" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:31:25 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.294867s.
|
|
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/plot_heatmap".
|
|
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Executing "plot_heatmap" <nireports.interfaces.dmri.DWIHeatmap>
|
|
2025-10-09 22:31:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.841619s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_fa".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004324s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_md".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004122s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_hm".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004194s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_fa".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.00416s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_md".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.00409s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_hm".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004075s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_fa".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004085s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_md".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.003864s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_hm".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.003887s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_fa".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_fa" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.003905s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_md".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_md" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004113s.
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_hm".
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Executing "ds_report_hm" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:31:28 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004083s.
|
|
2025-10-09 22:31:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/tpms_std2t1w/mapflow/_tpms_std2t1w0".
|
|
2025-10-09 22:31:29 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
|
|
2025-10-09 22:31:35 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 6.662015s.
|
|
2025-10-09 22:31:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/tpms_std2t1w/mapflow/_tpms_std2t1w1".
|
|
2025-10-09 22:31:36 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
|
|
2025-10-09 22:31:42 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 6.616843s.
|
|
2025-10-09 22:31:44 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/tpms_std2t1w/mapflow/_tpms_std2t1w2".
|
|
2025-10-09 22:31:44 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
|
|
2025-10-09 22:31:50 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 6.565075s.
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/tpms_std2t1w/mapflow/_tpms_std2t1w0".
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/tpms_std2t1w/mapflow/_tpms_std2t1w1".
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/tpms_std2t1w/mapflow/_tpms_std2t1w2".
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
|
|
2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
|
|
2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/Enhance".
|
|
2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.496512s.
|
|
2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/55958dc169743fd6d666b6d641859b94524961c5/format_tpm_names".
|
|
2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:31:57 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.3587259999999999s.
|
|
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/Grad".
|
|
2025-10-09 22:31:58 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:32:00 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.960378s.
|
|
2025-10-09 22:32:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/apply_mask".
|
|
2025-10-09 22:32:02 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
|
|
2025-10-09 22:32:02 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.270845s.
|
|
2025-10-09 22:32:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/GradientThreshold".
|
|
2025-10-09 22:32:04 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
|
|
2025-10-09 22:32:15 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 11.20009s.
|
|
2025-10-09 22:32:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/55958dc169743fd6d666b6d641859b94524961c5/segmentation".
|
|
2025-10-09 22:32:16 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
|
|
2025-10-09 22:33:23 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 67.431634s.
|
|
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/ArtifactMask".
|
|
2025-10-09 22:33:24 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
|
|
2025-10-09 22:33:26 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 2.336944s.
|
|
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotHeadmask".
|
|
2025-10-09 22:33:28 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
|
|
2025-10-09 22:33:30 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.1992760000000002s.
|
|
2025-10-09 22:33:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/55958dc169743fd6d666b6d641859b94524961c5/harmonize".
|
|
2025-10-09 22:33:32 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
|
|
2025-10-09 22:33:32 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.607988s.
|
|
2025-10-09 22:33:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotSegmentation".
|
|
2025-10-09 22:33:34 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
|
|
2025-10-09 22:33:36 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.539122s.
|
|
2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/55958dc169743fd6d666b6d641859b94524961c5/provenance".
|
|
2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
|
|
2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.050189s.
|
|
2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/55958dc169743fd6d666b6d641859b94524961c5/ComputeQI2".
|
|
2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
|
|
2025-10-09 22:33:46 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 7.820275s.
|
|
2025-10-09 22:33:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotAirmask".
|
|
2025-10-09 22:33:48 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
|
|
2025-10-09 22:33:50 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.212713s.
|
|
2025-10-09 22:33:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/PlotArtmask".
|
|
2025-10-09 22:33:52 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
|
|
2025-10-09 22:33:54 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.203551s.
|
|
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_headmask".
|
|
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003922s.
|
|
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/55958dc169743fd6d666b6d641859b94524961c5/measures".
|
|
2025-10-09 22:33:56 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
|
|
2025-10-09 22:33:58 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1684)
|
|
2025-10-09 22:33:58 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1684)
|
|
2025-10-09 22:33:58 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=0.1684)
|
|
2025-10-09 22:34:02 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 6.046586s.
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_segm".
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004143s.
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_noisefit".
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004006s.
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_airmask".
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003756s.
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/55958dc169743fd6d666b6d641859b94524961c5/ds_report_artmask".
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003785s.
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/55958dc169743fd6d666b6d641859b94524961c5/datasink".
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000541s.
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/averages/mapflow/_averages0".
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:34:04 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.236119s.
|
|
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/averages/mapflow/_averages1".
|
|
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:34:06 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.229625s.
|
|
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/averages/mapflow/_averages0".
|
|
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
|
|
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] "_averages0" found cached.
|
|
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/averages/mapflow/_averages1".
|
|
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
|
|
2025-10-09 22:34:08 | INFO | nipype.workflow | [Node] "_averages1" found cached.
|
|
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/motion_correct".
|
|
2025-10-09 22:34:10 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:36:09 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 118.985332s.
|
|
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ComputeFD".
|
|
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
|
|
2025-10-09 22:36:10 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.000977s.
|
|
2025-10-09 22:36:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/bvec_rot".
|
|
2025-10-09 22:36:12 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
|
|
2025-10-09 22:36:12 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.013266s.
|
|
2025-10-09 22:36:14 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:36:14 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:36:14 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.328016s.
|
|
2025-10-09 22:36:16 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:36:16 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:36:16 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.327522s.
|
|
2025-10-09 22:36:18 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:36:18 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
|
|
2025-10-09 22:36:18 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
|
|
2025-10-09 22:36:18 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:36:18 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
|
|
2025-10-09 22:36:18 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
|
|
2025-10-09 22:36:20 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/averages/mapflow/_averages0".
|
|
2025-10-09 22:36:20 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:36:20 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.267998s.
|
|
2025-10-09 22:36:22 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/averages/mapflow/_averages1".
|
|
2025-10-09 22:36:22 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:36:22 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.245548s.
|
|
2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/averages/mapflow/_averages0".
|
|
2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
|
|
2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] "_averages0" found cached.
|
|
2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/averages/mapflow/_averages1".
|
|
2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
|
|
2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] "_averages1" found cached.
|
|
2025-10-09 22:36:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/motion_correct".
|
|
2025-10-09 22:36:26 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 116.319875s.
|
|
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ComputeFD".
|
|
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
|
|
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.000924s.
|
|
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/bvec_rot".
|
|
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
|
|
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.012878s.
|
|
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.363835s.
|
|
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.327117s.
|
|
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
|
|
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
|
|
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
|
|
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
|
|
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0".
|
|
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.294915s.
|
|
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages1".
|
|
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.294334s.
|
|
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0".
|
|
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
|
|
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] "_averages0" found cached.
|
|
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages1".
|
|
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
|
|
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] "_averages1" found cached.
|
|
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/motion_correct".
|
|
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 133.675878s.
|
|
2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/ComputeFD".
|
|
2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
|
|
2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001051s.
|
|
2025-10-09 22:40:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/bvec_rot".
|
|
2025-10-09 22:40:56 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
|
|
2025-10-09 22:40:56 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.014599s.
|
|
2025-10-09 22:40:58 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:40:58 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:40:58 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.428357s.
|
|
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.426658s.
|
|
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
|
|
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
|
|
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
|
|
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
|
|
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/averages/mapflow/_averages0".
|
|
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Executing "_averages0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Finished "_averages0", elapsed time 0.294934s.
|
|
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/averages/mapflow/_averages1".
|
|
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Executing "_averages1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Finished "_averages1", elapsed time 0.32899s.
|
|
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Setting-up "_averages0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/averages/mapflow/_averages0".
|
|
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Cached "_averages0" - collecting precomputed outputs
|
|
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] "_averages0" found cached.
|
|
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Setting-up "_averages1" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/averages/mapflow/_averages1".
|
|
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Cached "_averages1" - collecting precomputed outputs
|
|
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] "_averages1" found cached.
|
|
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.motion_correct" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/584404c66e2dfa29edee927fc6af204539292f42/motion_correct".
|
|
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
|
|
2025-10-09 22:43:23 | INFO | nipype.workflow | [Node] Finished "motion_correct", elapsed time 133.602931s.
|
|
2025-10-09 22:43:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/584404c66e2dfa29edee927fc6af204539292f42/ComputeFD".
|
|
2025-10-09 22:43:24 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
|
|
2025-10-09 22:43:24 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005079s.
|
|
2025-10-09 22:43:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dMRI_HMC.bvec_rot" in "/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/584404c66e2dfa29edee927fc6af204539292f42/bvec_rot".
|
|
2025-10-09 22:43:26 | INFO | nipype.workflow | [Node] Executing "bvec_rot" <mriqc.interfaces.diffusion.RotateVectors>
|
|
2025-10-09 22:43:26 | INFO | nipype.workflow | [Node] Finished "bvec_rot", elapsed time 0.014691s.
|
|
2025-10-09 22:43:28 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:43:28 | INFO | nipype.workflow | [Node] Executing "_stddev0" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:43:28 | INFO | nipype.workflow | [Node] Finished "_stddev0", elapsed time 0.461387s.
|
|
2025-10-09 22:43:30 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:43:30 | INFO | nipype.workflow | [Node] Executing "_stddev1" <mriqc.interfaces.diffusion.WeightedStat>
|
|
2025-10-09 22:43:30 | INFO | nipype.workflow | [Node] Finished "_stddev1", elapsed time 0.462312s.
|
|
2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] Setting-up "_stddev0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/stddev/mapflow/_stddev0".
|
|
2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] Cached "_stddev0" - collecting precomputed outputs
|
|
2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] "_stddev0" found cached.
|
|
2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] Setting-up "_stddev1" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/stddev/mapflow/_stddev1".
|
|
2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] Cached "_stddev1" - collecting precomputed outputs
|
|
2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] "_stddev1" found cached.
|
|
2025-10-09 22:43:34 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:43:34 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.089799s.
|
|
2025-10-09 22:43:36 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:43:36 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:43:37 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.136922s.
|
|
2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
|
|
2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
|
|
2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
|
|
2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
|
|
2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:43:41 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 0.8011s.
|
|
2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 2.441847s.
|
|
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
|
|
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
|
|
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
|
|
2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
|
|
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/measures".
|
|
2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
|
|
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 2.749933s.
|
|
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/datasink".
|
|
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
|
|
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000458s.
|
|
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:43:52 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/stddev/mapflow/_stddev0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:43:52 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 11.981479s.
|
|
2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:44:06 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/stddev/mapflow/_stddev1/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/averages/mapflow/_averages1/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:44:06 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:44:16 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 10.626725s.
|
|
2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
|
|
2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
|
|
2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
|
|
2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
|
|
2025-10-09 22:44:20 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:44:20 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:44:21 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.094063s.
|
|
2025-10-09 22:44:22 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:44:22 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.153768s.
|
|
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
|
|
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
|
|
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
|
|
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
|
|
2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 0.801713s.
|
|
2025-10-09 22:44:28 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:44:28 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:44:30 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 2.480326s.
|
|
2025-10-09 22:44:32 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:44:32 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
|
|
2025-10-09 22:44:32 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
|
|
2025-10-09 22:44:32 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:44:32 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
|
|
2025-10-09 22:44:32 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
|
|
2025-10-09 22:44:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/dfe2c252c30065623ce89c4a7e586a1a79e821a7/measures".
|
|
2025-10-09 22:44:34 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
|
|
2025-10-09 22:44:36 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 2.6932080000000003s.
|
|
2025-10-09 22:44:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/dfe2c252c30065623ce89c4a7e586a1a79e821a7/datasink".
|
|
2025-10-09 22:44:38 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
|
|
2025-10-09 22:44:38 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000382s.
|
|
2025-10-09 22:44:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:44:38 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:44:38 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/stddev/mapflow/_stddev0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:44:38 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:44:50 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 12.038717s.
|
|
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:44:52 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/stddev/mapflow/_stddev1/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/averages/mapflow/_averages1/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:44:52 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 10.62674s.
|
|
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
|
|
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
|
|
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
|
|
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
|
|
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:45:06 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:45:07 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.082734s.
|
|
2025-10-09 22:45:08 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:45:08 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:45:09 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.1505670000000001s.
|
|
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
|
|
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
|
|
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
|
|
2025-10-09 22:45:10 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
|
|
2025-10-09 22:45:12 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:45:12 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.03922s.
|
|
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:45:14 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:45:17 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.412012s.
|
|
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
|
|
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
|
|
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
|
|
2025-10-09 22:45:18 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
|
|
2025-10-09 22:45:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0b99493ed2634281f17793dd6f27ff8a86e1c794/measures".
|
|
2025-10-09 22:45:20 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
|
|
2025-10-09 22:45:24 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.939571s.
|
|
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0b99493ed2634281f17793dd6f27ff8a86e1c794/datasink".
|
|
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
|
|
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000373s.
|
|
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:45:26 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/stddev/mapflow/_stddev0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:45:26 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:45:37 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 10.849397s.
|
|
2025-10-09 22:45:38 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:45:38 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:45:38 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/stddev/mapflow/_stddev1/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages1/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:45:38 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:45:50 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 12.061706s.
|
|
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
|
|
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
|
|
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
|
|
2025-10-09 22:45:52 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
|
|
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:45:54 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise0" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:45:55 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise0", elapsed time 1.098183s.
|
|
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:45:56 | INFO | nipype.workflow | [Node] Executing "_mosaic_noise1" <nireports.interfaces.mosaic.PlotMosaic>
|
|
2025-10-09 22:45:57 | INFO | nipype.workflow | [Node] Finished "_mosaic_noise1", elapsed time 1.15148s.
|
|
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_noise/mapflow/_mosaic_noise0".
|
|
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise0" - collecting precomputed outputs
|
|
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] "_mosaic_noise0" found cached.
|
|
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_noise/mapflow/_mosaic_noise1".
|
|
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] Cached "_mosaic_noise1" - collecting precomputed outputs
|
|
2025-10-09 22:45:58 | INFO | nipype.workflow | [Node] "_mosaic_noise1" found cached.
|
|
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:46:00 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells0" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:46:01 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells0", elapsed time 1.039726s.
|
|
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Executing "_get_hmc_shells1" <mriqc.interfaces.diffusion.ExtractOrientations>
|
|
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Finished "_get_hmc_shells1", elapsed time 3.419488s.
|
|
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells0" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/get_hmc_shells/mapflow/_get_hmc_shells0".
|
|
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells0" - collecting precomputed outputs
|
|
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] "_get_hmc_shells0" found cached.
|
|
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Setting-up "_get_hmc_shells1" in "/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/get_hmc_shells/mapflow/_get_hmc_shells1".
|
|
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] Cached "_get_hmc_shells1" - collecting precomputed outputs
|
|
2025-10-09 22:46:06 | INFO | nipype.workflow | [Node] "_get_hmc_shells1" found cached.
|
|
2025-10-09 22:46:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/584404c66e2dfa29edee927fc6af204539292f42/measures".
|
|
2025-10-09 22:46:08 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.diffusion.DiffusionQC>
|
|
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.85405s.
|
|
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/584404c66e2dfa29edee927fc6af204539292f42/datasink".
|
|
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
|
|
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000365s.
|
|
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:46:12 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr0" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:46:12 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/stddev/mapflow/_stddev0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:46:12 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:46:24 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr0", elapsed time 12.115358s.
|
|
2025-10-09 22:46:26 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:46:26 | INFO | nipype.workflow | [Node] Executing "_mosaic_snr1" <nireports.interfaces.reporting.base.SimpleBeforeAfterRPT>
|
|
2025-10-09 22:46:26 | INFO | nipype.interface | Report - setting before (/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/stddev/mapflow/_stddev1/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_nodriftfull_std.nii.gz) and after (/tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/averages/mapflow/_averages1/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_nodriftfull_mean.nii.gz) images
|
|
2025-10-09 22:46:26 | INFO | nipype.interface | Generating visual report
|
|
2025-10-09 22:46:38 | INFO | nipype.workflow | [Node] Finished "_mosaic_snr1", elapsed time 12.051001s.
|
|
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_snr/mapflow/_mosaic_snr0".
|
|
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr0" - collecting precomputed outputs
|
|
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] "_mosaic_snr0" found cached.
|
|
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Setting-up "_mosaic_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/mosaic_snr/mapflow/_mosaic_snr1".
|
|
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] Cached "_mosaic_snr1" - collecting precomputed outputs
|
|
2025-10-09 22:46:40 | INFO | nipype.workflow | [Node] "_mosaic_snr1" found cached.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003978s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004169s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004137s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004135s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004173s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004139s.
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004177s.
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.004124s.
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003981s.
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.004121s.
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003963s.
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003911s.
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.004039s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003704s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003551s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003879s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003551s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003726s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003607s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003743s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003558s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003803s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003706s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.00395s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003554s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_noise/mapflow/_ds_report_noise0".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise0", elapsed time 0.003756s.
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_noise1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_noise/mapflow/_ds_report_noise1".
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_noise1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_noise1", elapsed time 0.003688s.
|
|
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.008293s.
|
|
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.004496s.
|
|
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr0" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_snr/mapflow/_ds_report_snr0".
|
|
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr0" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr0", elapsed time 0.003822s.
|
|
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_snr1" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/584404c66e2dfa29edee927fc6af204539292f42/ds_report_snr/mapflow/_ds_report_snr1".
|
|
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_snr1" <mriqc.interfaces.DerivativesDataSink>
|
|
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_snr1", elapsed time 0.003556s.
|
|
2025-10-09 22:46:48 | INFO | nipype.workflow | Generating reports...
|
|
2025-10-09 22:46:49 | INFO | nipype.workflow | Report generation finished (5 reports).
|
|
2025-10-09 22:46:49 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 54s per subject.
|
|
2025-10-09 22:46:49 | INFO | mriqc | Generating BIDS derivatives metadata.
|
|
----------------------------------------------------------------
|
|
MRIQC completed (elapsed time 00h 34min 30s).
|
|
----------------------------------------------------------------
|
|
|