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ds003416-mriqc/logs/duct/sub-cIVs035_2025.10.09T23.58.18-4077778_usage.json
Felix Hoffstaedter a1ce5c5ef3 [DATALAD RUNCMD] Compute MRIQC for sub-cIVs035 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-cIVs035",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 00:48:51 +02:00

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{"timestamp": "2025-10-09T23:58:18.454448+02:00", "num_samples": 1, "processes": {"4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 6156288, "vsz": 20758528, "timestamp": "2025-10-09T23:58:18.454448+02:00", "etime": "00:00", "stat": {"Ss": 1}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 0.0, "rss": 6156288, "vsz": 20758528}, "averages": {"rss": 6156288, "vsz": 20758528, "pmem": 0.0, "pcpu": 0.0, "num_samples": 1}}
{"timestamp": "2025-10-09T23:59:18.452024+02:00", "num_samples": 57, "processes": {"4077923": {"pcpu": 36.1, "pmem": 0.0, "rss": 300609536, "vsz": 829173760, "timestamp": "2025-10-09T23:58:36.448039+02:00", "etime": "00:14", "stat": {"Sl": 15}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077798": {"pcpu": 77.6, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-09T23:59:18.452011+02:00", "etime": "00:59", "stat": {"R": 7, "S": 11, "Sl": 37, "Rl": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 2.7, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-09T23:59:18.451953+02:00", "etime": "01:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}, "4077928": {"pcpu": 100.0, "pmem": 0.0, "rss": 303534080, "vsz": 873590784, "timestamp": "2025-10-09T23:58:32.207360+02:00", "etime": "00:10", "stat": {"R": 5, "D": 1, "Rl": 1, "S": 4}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 91.3, "pmem": 0.1, "rss": 948465664, "vsz": 1675464704, "timestamp": "2025-10-09T23:59:18.452024+02:00", "etime": "00:40", "stat": {"S": 19, "R": 20}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 0.1, "pcpu": 170.2, "rss": 1294741504, "vsz": 3828523008}, "averages": {"rss": 672840721.9649122, "vsz": 3214830825.543859, "pmem": 0.007017543859649123, "pcpu": 71.61052631578951, "num_samples": 57}}
{"timestamp": "2025-10-10T00:00:18.910881+02:00", "num_samples": 57, "processes": {"4081268": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:00:18.910871+02:00", "etime": "00:44", "stat": {"S": 42}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4081269": {"pcpu": 101.0, "pmem": 0.0, "rss": 207933440, "vsz": 272293888, "timestamp": "2025-10-10T00:00:18.910881+02:00", "etime": "00:44", "stat": {"Rl": 42}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4077798": {"pcpu": 14.6, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:00:18.910847+02:00", "etime": "02:00", "stat": {"Sl": 56, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:00:18.910773+02:00", "etime": "02:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 50.0, "pmem": 0.1, "rss": 992874496, "vsz": 1870548992, "timestamp": "2025-10-10T00:00:18.910860+02:00", "etime": "01:41", "stat": {"S": 53, "R": 4}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 0.1, "pcpu": 157.6, "rss": 1339150336, "vsz": 4023607296}, "averages": {"rss": 961430653.754386, "vsz": 3550928680.4210525, "pmem": 0.005263157894736842, "pcpu": 118.70701754385964, "num_samples": 57}}
{"timestamp": "2025-10-10T00:01:18.806943+02:00", "num_samples": 56, "processes": {"4081268": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:01:18.806933+02:00", "etime": "01:44", "stat": {"S": 56}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4081269": {"pcpu": 96.6, "pmem": 0.0, "rss": 209506304, "vsz": 273047552, "timestamp": "2025-10-10T00:01:18.806943+02:00", "etime": "01:44", "stat": {"Rl": 56}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4077798": {"pcpu": 8.0, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:01:18.806909+02:00", "etime": "03:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:01:18.806865+02:00", "etime": "03:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 24.7, "pmem": 0.0, "rss": 440270848, "vsz": 1166069760, "timestamp": "2025-10-10T00:01:18.806922+02:00", "etime": "02:40", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 0.0, "pcpu": 129.3, "rss": 997515264, "vsz": 3595137024}, "averages": {"rss": 996012617.1428572, "vsz": 3594423734.857143, "pmem": 0.0, "pcpu": 122.48214285714289, "num_samples": 56}}
{"timestamp": "2025-10-10T00:02:18.460202+02:00", "num_samples": 56, "processes": {"4088130": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:02:18.460192+02:00", "etime": "00:08", "stat": {"S": 8}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4088131": {"pcpu": 89.5, "pmem": 0.7, "rss": 4136960000, "vsz": 7393615872, "timestamp": "2025-10-10T00:02:18.460202+02:00", "etime": "00:08", "stat": {"R": 7, "D": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4081268": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:01:51.867395+02:00", "etime": "02:17", "stat": {"S": 31}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4081269": {"pcpu": 96.3, "pmem": 0.0, "rss": 499208192, "vsz": 562479104, "timestamp": "2025-10-10T00:01:51.867404+02:00", "etime": "02:17", "stat": {"Rl": 31}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4077798": {"pcpu": 5.3, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:02:18.460168+02:00", "etime": "03:59", "stat": {"Sl": 54, "Rl": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:02:18.460068+02:00", "etime": "04:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 15.5, "pmem": 0.1, "rss": 884367360, "vsz": 1851920384, "timestamp": "2025-10-10T00:02:18.460182+02:00", "etime": "03:40", "stat": {"S": 48, "R": 8}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 0.7, "pcpu": 117.1, "rss": 4906958848, "vsz": 10697076736}, "averages": {"rss": 1138718134.857143, "vsz": 4144242761.1428566, "pmem": 0.03571428571428571, "pcpu": 84.57321428571429, "num_samples": 56}}
{"timestamp": "2025-10-10T00:03:19.359840+02:00", "num_samples": 57, "processes": {"4088130": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:03:19.359829+02:00", "etime": "01:09", "stat": {"S": 57}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4088131": {"pcpu": 95.1, "pmem": 2.2, "rss": 12162170880, "vsz": 15587270656, "timestamp": "2025-10-10T00:03:19.359840+02:00", "etime": "01:09", "stat": {"R": 57}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4077798": {"pcpu": 4.7, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:03:19.359806+02:00", "etime": "05:00", "stat": {"Sl": 57}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:03:19.359740+02:00", "etime": "05:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 14.5, "pmem": 0.0, "rss": 422039552, "vsz": 1147441152, "timestamp": "2025-10-10T00:03:19.359819+02:00", "etime": "04:41", "stat": {"S": 57}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 2.2, "pcpu": 111.6, "rss": 12932169728, "vsz": 18890731520}, "averages": {"rss": 6815008660.210527, "vsz": 12857231180.350874, "pmem": 1.068421052631579, "pcpu": 110.99824561403507, "num_samples": 57}}
{"timestamp": "2025-10-10T00:04:19.006158+02:00", "num_samples": 56, "processes": {"4088130": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:03:51.380274+02:00", "etime": "01:41", "stat": {"S": 30}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4088131": {"pcpu": 95.4, "pmem": 2.3, "rss": 12589989888, "vsz": 15587270656, "timestamp": "2025-10-10T00:03:51.380284+02:00", "etime": "01:41", "stat": {"R": 30}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4092741": {"pcpu": 0.0, "pmem": 0.0, "rss": 1695744, "vsz": 2961408, "timestamp": "2025-10-10T00:04:03.012173+02:00", "etime": "00:07", "stat": {"S": 7}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz"}, "4092742": {"pcpu": 100.0, "pmem": 0.0, "rss": 59977728, "vsz": 122851328, "timestamp": "2025-10-10T00:04:03.012183+02:00", "etime": "00:07", "stat": {"Rl": 7}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz"}, "4077798": {"pcpu": 3.8, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:04:19.006124+02:00", "etime": "06:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 11.3, "pmem": 0.0, "rss": 422039552, "vsz": 1147441152, "timestamp": "2025-10-10T00:04:19.006137+02:00", "etime": "05:41", "stat": {"S": 55, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4093141": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:04:19.006148+02:00", "etime": "00:15", "stat": {"S": 15}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:04:19.006062+02:00", "etime": "06:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4093142": {"pcpu": 114.0, "pmem": 0.0, "rss": 55808000, "vsz": 62472192, "timestamp": "2025-10-10T00:04:19.006158+02:00", "etime": "00:15", "stat": {"R": 15}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.nii.gz"}}, "totals": {"pmem": 2.3, "pcpu": 127.5, "rss": 13359988736, "vsz": 18890731520}, "averages": {"rss": 3595112740.57143, "vsz": 7925976283.428572, "pmem": 0.4946428571428573, "pcpu": 103.27678571428574, "num_samples": 56}}
{"timestamp": "2025-10-10T00:05:18.467487+02:00", "num_samples": 56, "processes": {"4077798": {"pcpu": 3.2, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:05:18.467452+02:00", "etime": "06:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 9.6, "pmem": 0.0, "rss": 422039552, "vsz": 1147441152, "timestamp": "2025-10-10T00:05:18.467465+02:00", "etime": "06:40", "stat": {"S": 53, "R": 3}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4094639": {"pcpu": 0.0, "pmem": 0.0, "rss": 1716224, "vsz": 2961408, "timestamp": "2025-10-10T00:04:58.299338+02:00", "etime": "00:20", "stat": {"S": 20}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset.nii.gz"}, "4094641": {"pcpu": 100.0, "pmem": 0.0, "rss": 53321728, "vsz": 62472192, "timestamp": "2025-10-10T00:04:58.299347+02:00", "etime": "00:20", "stat": {"R": 20}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_subset.nii.gz"}, "4096146": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:05:18.467477+02:00", "etime": "00:06", "stat": {"S": 7}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.nii.gz"}, "4096147": {"pcpu": 133.0, "pmem": 0.0, "rss": 58265600, "vsz": 65089536, "timestamp": "2025-10-10T00:05:18.467487+02:00", "etime": "00:06", "stat": {"R": 7}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.nii.gz"}, "4093141": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:04:24.335326+02:00", "etime": "00:20", "stat": {"S": 5}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:05:18.467385+02:00", "etime": "07:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4093142": {"pcpu": 96.3, "pmem": 0.0, "rss": 53096448, "vsz": 59764736, "timestamp": "2025-10-10T00:04:24.335335+02:00", "etime": "00:20", "stat": {"R": 5}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_subset.nii.gz"}, "4095802": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:05:08.919369+02:00", "etime": "00:06", "stat": {"S": 7}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz"}, "4095803": {"pcpu": 102.0, "pmem": 0.0, "rss": 60137472, "vsz": 122851328, "timestamp": "2025-10-10T00:05:08.919379+02:00", "etime": "00:06", "stat": {"Rl": 7}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz"}, "4094172": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:04:34.925156+02:00", "etime": "00:06", "stat": {"S": 7}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz"}, "4094173": {"pcpu": 101.0, "pmem": 0.0, "rss": 60440576, "vsz": 122851328, "timestamp": "2025-10-10T00:04:34.925166+02:00", "etime": "00:06", "stat": {"Rl": 7}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz"}}, "totals": {"pmem": 0.0, "pcpu": 144.8, "rss": 830140416, "vsz": 3426312192}, "averages": {"rss": 812749823.9999999, "vsz": 3365630464.0, "pmem": 0.0, "pcpu": 92.59107142857142, "num_samples": 56}}
{"timestamp": "2025-10-10T00:06:18.962027+02:00", "num_samples": 57, "processes": {"4077798": {"pcpu": 3.0, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:06:18.961993+02:00", "etime": "08:00", "stat": {"Sl": 56, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 8.7, "pmem": 0.0, "rss": 422039552, "vsz": 1147441152, "timestamp": "2025-10-10T00:06:18.962007+02:00", "etime": "07:41", "stat": {"S": 57}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4097615": {"pcpu": 0.0, "pmem": 0.0, "rss": 1695744, "vsz": 2961408, "timestamp": "2025-10-10T00:05:51.363017+02:00", "etime": "00:07", "stat": {"S": 7}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz"}, "4097616": {"pcpu": 100.0, "pmem": 0.0, "rss": 59871232, "vsz": 122851328, "timestamp": "2025-10-10T00:05:51.363027+02:00", "etime": "00:07", "stat": {"Rl": 7}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average.nii.gz --output sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz"}, "4096146": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:05:39.765725+02:00", "etime": "00:27", "stat": {"S": 20}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.nii.gz"}, "4096147": {"pcpu": 96.4, "pmem": 0.0, "rss": 58265600, "vsz": 65089536, "timestamp": "2025-10-10T00:05:39.765735+02:00", "etime": "00:27", "stat": {"R": 20}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_subset.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:06:18.961928+02:00", "etime": "08:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}, "4098078": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:06:18.962018+02:00", "etime": "00:24", "stat": {"S": 24}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.nii.gz"}, "4098079": {"pcpu": 102.0, "pmem": 0.0, "rss": 58691584, "vsz": 67891200, "timestamp": "2025-10-10T00:06:18.962027+02:00", "etime": "00:24", "stat": {"R": 24}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.nii.gz"}}, "totals": {"pmem": 0.0, "pcpu": 113.0, "rss": 829882368, "vsz": 3426312192}, "averages": {"rss": 820064902.7368422, "vsz": 3366363782.7368417, "pmem": 0.0, "pcpu": 97.51228070175436, "num_samples": 57}}
{"timestamp": "2025-10-10T00:07:18.387887+02:00", "num_samples": 56, "processes": {"4077798": {"pcpu": 2.7, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:07:18.387851+02:00", "etime": "08:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 9.3, "pmem": 0.1, "rss": 662339584, "vsz": 1387921408, "timestamp": "2025-10-10T00:07:18.387865+02:00", "etime": "08:40", "stat": {"S": 44, "R": 11, "D": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4099536": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:06:44.506935+02:00", "etime": "00:22", "stat": {"S": 22}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4099537": {"pcpu": 100.0, "pmem": 0.1, "rss": 557821952, "vsz": 620441600, "timestamp": "2025-10-10T00:06:44.506945+02:00", "etime": "00:22", "stat": {"Rl": 22}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4102738": {"pcpu": 0.0, "pmem": 0.0, "rss": 1703936, "vsz": 2961408, "timestamp": "2025-10-10T00:07:18.387876+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4102739": {"pcpu": 106.0, "pmem": 0.0, "rss": 60018688, "vsz": 122855424, "timestamp": "2025-10-10T00:07:18.387887+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4100949": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:06:54.045922+02:00", "etime": "00:03", "stat": {"S": 4}, "cmd": "/bin/sh -c 3dFWHMx -ShowMeClassicFWHM -combine -detrend -input /tmp/mriqc_wf/anatMRIQC/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/conform/sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed.nii.gz -mask /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -detprefix sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed_detrend -out sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed_subbricks.out > sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed_fwhmx.out"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:07:18.387783+02:00", "etime": "08:59", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4102135": {"pcpu": 0.0, "pmem": 0.0, "rss": 1716224, "vsz": 2961408, "timestamp": "2025-10-10T00:07:15.240204+02:00", "etime": "00:07", "stat": {"S": 7}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4102136": {"pcpu": 101.0, "pmem": 0.0, "rss": 60190720, "vsz": 122855424, "timestamp": "2025-10-10T00:07:15.240214+02:00", "etime": "00:07", "stat": {"Rl": 7}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "4100950": {"pcpu": 98.6, "pmem": 0.0, "rss": 113385472, "vsz": 124305408, "timestamp": "2025-10-10T00:06:54.045932+02:00", "etime": "00:03", "stat": {"R": 4}, "cmd": "3dFWHMx -ShowMeClassicFWHM -combine -detrend -input /tmp/mriqc_wf/anatMRIQC/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/conform/sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed.nii.gz -mask /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -detprefix sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed_detrend -out sub-cIVs035_ses-s1Bx2_acq-r10x10x10_T1w_conformed_subbricks.out"}, "4098078": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:06:21.087348+02:00", "etime": "00:27", "stat": {"S": 2}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.nii.gz"}, "4098079": {"pcpu": 96.3, "pmem": 0.0, "rss": 54763520, "vsz": 61415424, "timestamp": "2025-10-10T00:06:21.087358+02:00", "etime": "00:27", "stat": {"R": 2}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/dwi_ref/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/hmc_b0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_subset.nii.gz"}}, "totals": {"pmem": 0.1, "pcpu": 117.7, "rss": 1327521792, "vsz": 3923902464}, "averages": {"rss": 945353874.285714, "vsz": 3516267958.8571424, "pmem": 0.019642857142857146, "pcpu": 73.31428571428572, "num_samples": 56}}
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{"timestamp": "2025-10-10T00:09:19.007614+02:00", "num_samples": 56, "processes": {"4104707": {"pcpu": 0.0, "pmem": 0.0, "rss": 1732608, "vsz": 2961408, "timestamp": "2025-10-10T00:09:17.932116+02:00", "etime": "01:26", "stat": {"S": 55}, "cmd": "/bin/sh -c antsAffineInitializer 3 /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4104708": {"pcpu": 95.9, "pmem": 0.0, "rss": 405299200, "vsz": 462032896, "timestamp": "2025-10-10T00:09:17.932127+02:00", "etime": "01:26", "stat": {"Rl": 55}, "cmd": "antsAffineInitializer 3 /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4077798": {"pcpu": 2.4, "pmem": 0.0, "rss": 327856128, "vsz": 876064768, "timestamp": "2025-10-10T00:09:19.007576+02:00", "etime": "11:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:09:19.007508+02:00", "etime": "11:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4110504": {"pcpu": 102.0, "pmem": 0.0, "rss": 292487168, "vsz": 346386432, "timestamp": "2025-10-10T00:09:19.007614+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4110503": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:09:19.007603+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4078698": {"pcpu": 8.5, "pmem": 0.0, "rss": 470376448, "vsz": 1195462656, "timestamp": "2025-10-10T00:09:19.007591+02:00", "etime": "10:41", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 0.0, "pcpu": 112.0, "rss": 1223684096, "vsz": 3813515264}, "averages": {"rss": 1221670034.2857144, "vsz": 3811450148.571429, "pmem": 0.0, "pcpu": 106.38035714285714, "num_samples": 56}}
{"timestamp": "2025-10-10T00:10:19.436701+02:00", "num_samples": 56, "processes": {"4112901": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:09:51.185172+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4112902": {"pcpu": 105.0, "pmem": 0.0, "rss": 71004160, "vsz": 1017630720, "timestamp": "2025-10-10T00:09:51.185183+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4113168": {"pcpu": 0.0, "pmem": 0.0, "rss": 1388544, "vsz": 2961408, "timestamp": "2025-10-10T00:09:55.551636+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4113169": {"pcpu": 104.0, "pmem": 0.0, "rss": 96759808, "vsz": 1075494912, "timestamp": "2025-10-10T00:09:55.551647+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:10:19.436601+02:00", "etime": "12:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4077798": {"pcpu": 2.2, "pmem": 0.0, "rss": 328118272, "vsz": 876064768, "timestamp": "2025-10-10T00:10:19.436665+02:00", "etime": "12:00", "stat": {"Sl": 55, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4110503": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:09:38.279907+02:00", "etime": "00:19", "stat": {"S": 18}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4110504": {"pcpu": 96.8, "pmem": 0.0, "rss": 503259136, "vsz": 643231744, "timestamp": "2025-10-10T00:09:38.279921+02:00", "etime": "00:19", "stat": {"Rl": 18}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4113320": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:09:58.800103+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4078698": {"pcpu": 9.5, "pmem": 0.1, "rss": 566870016, "vsz": 1291935744, "timestamp": "2025-10-10T00:10:19.436679+02:00", "etime": "11:41", "stat": {"S": 40, "R": 16}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4113321": {"pcpu": 121.0, "pmem": 0.0, "rss": 67993600, "vsz": 1017495552, "timestamp": "2025-10-10T00:09:58.800114+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4113772": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:10:19.436690+02:00", "etime": "00:14", "stat": {"S": 14}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4113773": {"pcpu": 104.0, "pmem": 0.5, "rss": 2884378624, "vsz": 6027849728, "timestamp": "2025-10-10T00:10:19.436701+02:00", "etime": "00:14", "stat": {"R": 14}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4112695": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:09:47.951279+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - 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{"timestamp": "2025-10-10T00:11:18.432689+02:00", "num_samples": 55, "processes": {"4077798": {"pcpu": 2.1, "pmem": 0.0, "rss": 328433664, "vsz": 876064768, "timestamp": "2025-10-10T00:11:18.432655+02:00", "etime": "12:59", "stat": {"Sl": 55}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4116471": {"pcpu": 0.0, "pmem": 0.0, "rss": 1703936, "vsz": 2961408, "timestamp": "2025-10-10T00:11:18.432679+02:00", "etime": "00:22", "stat": {"S": 21}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:11:18.432608+02:00", "etime": "12:59", "stat": {"Ssl": 55}, "cmd": "Singularity runtime parent"}, "4116472": {"pcpu": 100.0, "pmem": 0.5, "rss": 2905219072, "vsz": 6268137472, "timestamp": "2025-10-10T00:11:18.432689+02:00", "etime": "00:22", "stat": {"R": 21}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4078698": {"pcpu": 9.2, "pmem": 0.0, "rss": 485208064, "vsz": 1208647680, "timestamp": "2025-10-10T00:11:18.432668+02:00", "etime": "12:40", "stat": {"S": 54, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4113772": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:10:52.812702+02:00", "etime": "00:47", "stat": {"S": 31}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4113773": {"pcpu": 95.7, "pmem": 1.1, "rss": 6290251776, "vsz": 9278468096, "timestamp": "2025-10-10T00:10:52.812712+02:00", "etime": "00:47", "stat": {"R": 31}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}}, "totals": {"pmem": 1.1, "pcpu": 110.8, "rss": 7123382272, "vsz": 12643135488}, "averages": {"rss": 3606528819.2000003, "vsz": 9145543661.381823, "pmem": 0.46545454545454534, "pcpu": 101.0781818181818, "num_samples": 55}}
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{"timestamp": "2025-10-10T00:13:18.806244+02:00", "num_samples": 56, "processes": {"4119013": {"pcpu": 0.0, "pmem": 0.0, "rss": 1716224, "vsz": 2961408, "timestamp": "2025-10-10T00:12:31.952474+02:00", "etime": "00:45", "stat": {"S": 12}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4077798": {"pcpu": 1.8, "pmem": 0.0, "rss": 328433664, "vsz": 876064768, "timestamp": "2025-10-10T00:13:18.806210+02:00", "etime": "15:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4119014": {"pcpu": 96.2, "pmem": 0.5, "rss": 3099316224, "vsz": 6069952512, "timestamp": "2025-10-10T00:12:31.952485+02:00", "etime": "00:45", "stat": {"R": 12}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4121400": {"pcpu": 98.8, "pmem": 1.1, "rss": 6314065920, "vsz": 9291046912, "timestamp": "2025-10-10T00:13:18.806244+02:00", "etime": "00:44", "stat": {"R": 42}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:13:18.806146+02:00", "etime": "15:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 7.9, "pmem": 0.0, "rss": 485208064, "vsz": 1208647680, "timestamp": "2025-10-10T00:13:18.806223+02:00", "etime": "14:40", "stat": {"S": 55, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4121399": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:13:18.806233+02:00", "etime": "00:44", "stat": {"S": 42}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}}, "totals": {"pmem": 1.1, "pcpu": 108.39999999999999, "rss": 7147876352, "vsz": 12655714304}, "averages": {"rss": 3424200630.8571444, "vsz": 8983735954.285715, "pmem": 0.42678571428571443, "pcpu": 102.33035714285711, "num_samples": 56}}
{"timestamp": "2025-10-10T00:14:18.383844+02:00", "num_samples": 56, "processes": {"4124480": {"pcpu": 0.0, "pmem": 0.0, "rss": 1703936, "vsz": 2961408, "timestamp": "2025-10-10T00:14:01.342983+02:00", "etime": "00:33", "stat": {"S": 31}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4124481": {"pcpu": 99.0, "pmem": 0.0, "rss": 92106752, "vsz": 148774912, "timestamp": "2025-10-10T00:14:01.342992+02:00", "etime": "00:33", "stat": {"Rl": 31}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4126563": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:14:18.383833+02:00", "etime": "00:16", "stat": {"S": 16}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4126564": {"pcpu": 112.0, "pmem": 0.0, "rss": 265162752, "vsz": 316305408, "timestamp": "2025-10-10T00:14:18.383844+02:00", "etime": "00:16", "stat": {"Rl": 16}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4077798": {"pcpu": 1.8, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:14:18.383810+02:00", "etime": "15:59", "stat": {"Sl": 55, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 7.6, "pmem": 0.1, "rss": 774410240, "vsz": 1716330496, "timestamp": "2025-10-10T00:14:18.383823+02:00", "etime": "15:40", "stat": {"S": 55, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:14:18.383753+02:00", "etime": "15:59", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4124124": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:13:21.978292+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4124125": {"pcpu": 100.0, "pmem": 0.0, "rss": 63381504, "vsz": 126140416, "timestamp": "2025-10-10T00:13:21.978303+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}}, "totals": {"pmem": 0.1, "pcpu": 121.1, "rss": 1121263616, "vsz": 3869523968}, "averages": {"rss": 913974857.142857, "vsz": 3497528758.8571434, "pmem": 0.0017857142857142859, "pcpu": 94.05535714285713, "num_samples": 56}}
{"timestamp": "2025-10-10T00:15:19.094671+02:00", "num_samples": 57, "processes": {"4131169": {"pcpu": 0.0, "pmem": 0.0, "rss": 1703936, "vsz": 2961408, "timestamp": "2025-10-10T00:15:16.965090+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4131170": {"pcpu": 106.0, "pmem": 0.0, "rss": 58720256, "vsz": 1004195840, "timestamp": "2025-10-10T00:15:16.965099+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4126563": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:15:10.554336+02:00", "etime": "01:08", "stat": {"S": 49}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4126564": {"pcpu": 96.5, "pmem": 0.0, "rss": 265162752, "vsz": 316305408, "timestamp": "2025-10-10T00:15:10.554345+02:00", "etime": "01:08", "stat": {"Rl": 49}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2a7574162ad3bff6093acf95c24f9091e90682a8/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2a7574162ad3bff6093acf95c24f9091e90682a8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4077798": {"pcpu": 1.7, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:15:19.094656+02:00", "etime": "17:00", "stat": {"Sl": 56, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 7.3, "pmem": 0.0, "rss": 486232064, "vsz": 1300725760, "timestamp": "2025-10-10T00:15:19.094671+02:00", "etime": "16:41", "stat": {"S": 52, "R": 5}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4130827": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:15:13.749413+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4130828": {"pcpu": 125.0, "pmem": 0.0, "rss": 47734784, "vsz": 996425728, "timestamp": "2025-10-10T00:15:13.749423+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:15:19.094594+02:00", "etime": "17:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 133.7, "rss": 1059258368, "vsz": 4340518912}, "averages": {"rss": 1021856857.8245615, "vsz": 3631728747.7894735, "pmem": 0.0, "pcpu": 95.60877192982456, "num_samples": 57}}
{"timestamp": "2025-10-10T00:16:18.686214+02:00", "num_samples": 56, "processes": {"4077798": {"pcpu": 1.6, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:16:18.686179+02:00", "etime": "18:00", "stat": {"Sl": 55, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4132008": {"pcpu": 0.0, "pmem": 0.0, "rss": 1388544, "vsz": 2961408, "timestamp": "2025-10-10T00:15:26.677342+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "4132009": {"pcpu": 120.0, "pmem": 0.0, "rss": 11038720, "vsz": 18243584, "timestamp": "2025-10-10T00:15:26.677352+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}, "4078698": {"pcpu": 8.0, "pmem": 0.1, "rss": 759730176, "vsz": 1716330496, "timestamp": "2025-10-10T00:16:18.686193+02:00", "etime": "17:40", "stat": {"S": 49, "R": 7}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4133101": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:16:12.298975+02:00", "etime": "00:33", "stat": {"S": 32}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4133102": {"pcpu": 100.0, "pmem": 0.0, "rss": 92192768, "vsz": 148774912, "timestamp": "2025-10-10T00:16:12.298985+02:00", "etime": "00:33", "stat": {"Rl": 32}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4131407": {"pcpu": 0.0, "pmem": 0.0, "rss": 1445888, "vsz": 2961408, "timestamp": "2025-10-10T00:15:20.219522+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4131408": {"pcpu": 109.0, "pmem": 0.0, "rss": 83439616, "vsz": 1070809088, "timestamp": "2025-10-10T00:15:20.219532+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4135759": {"pcpu": 0.0, "pmem": 0.0, "rss": 1728512, "vsz": 2961408, "timestamp": "2025-10-10T00:16:18.686203+02:00", "etime": "00:05", "stat": {"S": 6}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4131666": {"pcpu": 0.0, "pmem": 0.0, "rss": 1695744, "vsz": 2961408, "timestamp": "2025-10-10T00:15:23.474657+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4131667": {"pcpu": 109.0, "pmem": 0.0, "rss": 95961088, "vsz": 1075793920, "timestamp": "2025-10-10T00:15:23.474668+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4135760": {"pcpu": 102.0, "pmem": 0.0, "rss": 208986112, "vsz": 260456448, "timestamp": "2025-10-10T00:16:18.686214+02:00", "etime": "00:05", "stat": {"Rl": 6}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4132373": {"pcpu": 0.0, "pmem": 0.0, "rss": 1388544, "vsz": 2961408, "timestamp": "2025-10-10T00:15:32.007402+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:16:18.686118+02:00", "etime": "18:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4132374": {"pcpu": 103.0, "pmem": 0.0, "rss": 63586304, "vsz": 126140416, "timestamp": "2025-10-10T00:15:32.007413+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}}, "totals": {"pmem": 0.1, "pcpu": 129.3, "rss": 1106583552, "vsz": 4412116992}, "averages": {"rss": 877688685.7142857, "vsz": 3488470820.5714283, "pmem": 0.0017857142857142859, "pcpu": 84.79107142857141, "num_samples": 56}}
{"timestamp": "2025-10-10T00:17:18.391550+02:00", "num_samples": 56, "processes": {"4135760": {"pcpu": 96.7, "pmem": 0.0, "rss": 264822784, "vsz": 316305408, "timestamp": "2025-10-10T00:17:18.391550+02:00", "etime": "01:05", "stat": {"Rl": 56}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4077798": {"pcpu": 1.5, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:17:18.391516+02:00", "etime": "18:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:17:18.391455+02:00", "etime": "18:59", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 7.7, "pmem": 0.0, "rss": 445558784, "vsz": 1168998400, "timestamp": "2025-10-10T00:17:18.391529+02:00", "etime": "18:40", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4135759": {"pcpu": 0.0, "pmem": 0.0, "rss": 1728512, "vsz": 2961408, "timestamp": "2025-10-10T00:17:18.391540+02:00", "etime": "01:05", "stat": {"S": 56}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}}, "totals": {"pmem": 0.0, "pcpu": 105.8, "rss": 1058963456, "vsz": 3641458688}, "averages": {"rss": 1048353865.1428576, "vsz": 3630906953.142857, "pmem": 0.0, "pcpu": 105.40000000000003, "num_samples": 56}}
{"timestamp": "2025-10-10T00:18:19.133504+02:00", "num_samples": 57, "processes": {"4141505": {"pcpu": 0.0, "pmem": 0.0, "rss": 1531904, "vsz": 2961408, "timestamp": "2025-10-10T00:17:36.545614+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4141506": {"pcpu": 100.0, "pmem": 0.0, "rss": 55820288, "vsz": 998948864, "timestamp": "2025-10-10T00:17:36.545624+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4143748": {"pcpu": 0.0, "pmem": 0.0, "rss": 1400832, "vsz": 2961408, "timestamp": "2025-10-10T00:18:19.133494+02:00", "etime": "00:20", "stat": {"S": 20}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4143750": {"pcpu": 100.0, "pmem": 0.0, "rss": 92135424, "vsz": 148774912, "timestamp": "2025-10-10T00:18:19.133504+02:00", "etime": "00:20", "stat": {"Rl": 20}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4135759": {"pcpu": 0.0, "pmem": 0.0, "rss": 1728512, "vsz": 2961408, "timestamp": "2025-10-10T00:17:27.988197+02:00", "etime": "01:15", "stat": {"S": 9}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4135760": {"pcpu": 96.4, "pmem": 0.0, "rss": 264822784, "vsz": 316305408, "timestamp": "2025-10-10T00:17:27.988206+02:00", "etime": "01:15", "stat": {"Rl": 9}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b8e8060be7d54ed19f0a034820005f91d4b41122/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:18:19.133409+02:00", "etime": "20:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}, "4141785": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:17:39.760710+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4141786": {"pcpu": 117.0, "pmem": 0.0, "rss": 60649472, "vsz": 1004355584, "timestamp": "2025-10-10T00:17:39.760720+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4142433": {"pcpu": 0.0, "pmem": 0.0, "rss": 1679360, "vsz": 2961408, "timestamp": "2025-10-10T00:17:46.211600+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4142434": {"pcpu": 106.0, "pmem": 0.0, "rss": 69726208, "vsz": 1018036224, "timestamp": "2025-10-10T00:17:46.211610+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4142821": {"pcpu": 0.0, "pmem": 0.0, "rss": 1400832, "vsz": 2961408, "timestamp": "2025-10-10T00:17:50.443676+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4077798": {"pcpu": 1.5, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:18:19.133471+02:00", "etime": "20:00", "stat": {"Sl": 56, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4142822": {"pcpu": 101.0, "pmem": 0.0, "rss": 79675392, "vsz": 142409728, "timestamp": "2025-10-10T00:17:50.443687+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4078698": {"pcpu": 8.2, "pmem": 0.2, "rss": 1204117504, "vsz": 1927671808, "timestamp": "2025-10-10T00:18:19.133484+02:00", "etime": "19:41", "stat": {"S": 45, "R": 12}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4142065": {"pcpu": 0.0, "pmem": 0.0, "rss": 1400832, "vsz": 2961408, "timestamp": "2025-10-10T00:17:42.981617+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4142066": {"pcpu": 117.0, "pmem": 0.0, "rss": 60268544, "vsz": 1004294144, "timestamp": "2025-10-10T00:17:42.981627+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4140915": {"pcpu": 0.0, "pmem": 0.0, "rss": 1445888, "vsz": 2961408, "timestamp": "2025-10-10T00:17:31.225204+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4140916": {"pcpu": 107.0, "pmem": 0.0, "rss": 97853440, "vsz": 1077772288, "timestamp": "2025-10-10T00:17:31.225214+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4141309": {"pcpu": 0.0, "pmem": 0.0, "rss": 1695744, "vsz": 2961408, "timestamp": "2025-10-10T00:17:34.419368+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "4141310": {"pcpu": 104.0, "pmem": 0.0, "rss": 11755520, "vsz": 18845696, "timestamp": "2025-10-10T00:17:34.419378+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}}, "totals": {"pmem": 0.2, "pcpu": 126.3, "rss": 1550970880, "vsz": 4402925568}, "averages": {"rss": 901414840.1403506, "vsz": 3548760099.9298253, "pmem": 0.008771929824561405, "pcpu": 73.29999999999997, "num_samples": 57}}
{"timestamp": "2025-10-10T00:19:18.931949+02:00", "num_samples": 56, "processes": {"4143748": {"pcpu": 0.0, "pmem": 0.0, "rss": 1400832, "vsz": 2961408, "timestamp": "2025-10-10T00:18:31.959794+02:00", "etime": "00:33", "stat": {"S": 12}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4143750": {"pcpu": 96.3, "pmem": 0.0, "rss": 92135424, "vsz": 148774912, "timestamp": "2025-10-10T00:18:31.959805+02:00", "etime": "00:33", "stat": {"Rl": 12}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4077798": {"pcpu": 1.4, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:19:18.931914+02:00", "etime": "21:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:19:18.931850+02:00", "etime": "21:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 8.1, "pmem": 0.0, "rss": 450977792, "vsz": 1174417408, "timestamp": "2025-10-10T00:19:18.931927+02:00", "etime": "20:41", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4146890": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:19:18.931939+02:00", "etime": "00:46", "stat": {"S": 44}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4146891": {"pcpu": 114.0, "pmem": 0.0, "rss": 264392704, "vsz": 316305408, "timestamp": "2025-10-10T00:19:18.931949+02:00", "etime": "00:46", "stat": {"Rl": 44}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}}, "totals": {"pmem": 0.0, "pcpu": 123.4, "rss": 1063686144, "vsz": 3646877696}, "averages": {"rss": 1002879780.5714285, "vsz": 3587839414.8571434, "pmem": 0.0, "pcpu": 105.80714285714286, "num_samples": 56}}
{"timestamp": "2025-10-10T00:20:18.663482+02:00", "num_samples": 56, "processes": {"4151872": {"pcpu": 0.0, "pmem": 0.0, "rss": 1384448, "vsz": 2961408, "timestamp": "2025-10-10T00:19:50.970930+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4151873": {"pcpu": 125.0, "pmem": 0.0, "rss": 44281856, "vsz": 857763840, "timestamp": "2025-10-10T00:19:50.970939+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4146890": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:19:47.771463+02:00", "etime": "01:14", "stat": {"S": 27}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4146891": {"pcpu": 96.1, "pmem": 0.0, "rss": 264392704, "vsz": 316305408, "timestamp": "2025-10-10T00:19:47.771474+02:00", "etime": "01:14", "stat": {"Rl": 27}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/109f89ad29d71cf73bd1c9f0b07a180c516b815f/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/109f89ad29d71cf73bd1c9f0b07a180c516b815f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4153742": {"pcpu": 0.0, "pmem": 0.0, "rss": 1462272, "vsz": 2961408, "timestamp": "2025-10-10T00:20:10.212308+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4153743": {"pcpu": 101.0, "pmem": 0.0, "rss": 63270912, "vsz": 126140416, "timestamp": "2025-10-10T00:20:10.212318+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:20:18.663377+02:00", "etime": "22:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4154648": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:20:18.663471+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4154650": {"pcpu": 106.0, "pmem": 0.0, "rss": 72957952, "vsz": 146063360, "timestamp": "2025-10-10T00:20:18.663482+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4153375": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:20:04.877850+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "4153376": {"pcpu": 300.0, "pmem": 0.0, "rss": 6004736, "vsz": 12001280, "timestamp": "2025-10-10T00:20:04.877861+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}, "4077798": {"pcpu": 1.4, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:20:18.663444+02:00", "etime": "22:00", "stat": {"Sl": 54, "Rl": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 8.5, "pmem": 0.2, "rss": 1204117504, "vsz": 1927671808, "timestamp": "2025-10-10T00:20:18.663459+02:00", "etime": "21:40", "stat": {"S": 44, "R": 12}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4153579": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:20:07.013699+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4153580": {"pcpu": 125.0, "pmem": 0.0, "rss": 47599616, "vsz": 996044800, "timestamp": "2025-10-10T00:20:07.013708+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4152814": {"pcpu": 0.0, "pmem": 0.0, "rss": 1400832, "vsz": 2961408, "timestamp": "2025-10-10T00:20:00.604341+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4152815": {"pcpu": 0.0, "pmem": 0.0, "rss": 39268352, "vsz": 721960960, "timestamp": "2025-10-10T00:20:00.604351+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4152178": {"pcpu": 0.0, "pmem": 0.0, "rss": 1703936, "vsz": 2961408, "timestamp": "2025-10-10T00:19:54.180691+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4152179": {"pcpu": 166.0, "pmem": 0.0, "rss": 42352640, "vsz": 856993792, "timestamp": "2025-10-10T00:19:54.180702+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4152632": {"pcpu": 0.0, "pmem": 0.0, "rss": 1531904, "vsz": 2961408, "timestamp": "2025-10-10T00:19:58.466056+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "4152633": {"pcpu": 300.0, "pmem": 0.0, "rss": 6057984, "vsz": 11845632, "timestamp": "2025-10-10T00:19:58.466066+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}, "4152508": {"pcpu": 0.0, "pmem": 0.0, "rss": 1445888, "vsz": 2961408, "timestamp": "2025-10-10T00:19:57.399553+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4152509": {"pcpu": 111.0, "pmem": 0.0, "rss": 57532416, "vsz": 1002803200, "timestamp": "2025-10-10T00:19:57.399563+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}}, "totals": {"pmem": 0.2, "pcpu": 309.5, "rss": 1550970880, "vsz": 4352192512}, "averages": {"rss": 962599789.714286, "vsz": 3598080731.428572, "pmem": 0.007142857142857143, "pcpu": 81.04285714285717, "num_samples": 56}}
{"timestamp": "2025-10-10T00:21:18.471905+02:00", "num_samples": 56, "processes": {"4077798": {"pcpu": 1.3, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:21:18.471869+02:00", "etime": "22:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:21:18.471807+02:00", "etime": "23:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4154648": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:20:53.875447+02:00", "etime": "00:35", "stat": {"S": 33}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4157464": {"pcpu": 0.0, "pmem": 0.0, "rss": 1515520, "vsz": 2961408, "timestamp": "2025-10-10T00:21:18.471894+02:00", "etime": "00:24", "stat": {"S": 23}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4078698": {"pcpu": 8.5, "pmem": 0.0, "rss": 450977792, "vsz": 1174417408, "timestamp": "2025-10-10T00:21:18.471882+02:00", "etime": "22:40", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4154650": {"pcpu": 97.5, "pmem": 0.0, "rss": 92151808, "vsz": 148774912, "timestamp": "2025-10-10T00:20:53.875457+02:00", "etime": "00:35", "stat": {"Rl": 33}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "4157465": {"pcpu": 101.0, "pmem": 0.0, "rss": 264847360, "vsz": 316305408, "timestamp": "2025-10-10T00:21:18.471905+02:00", "etime": "00:24", "stat": {"Rl": 23}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}}, "totals": {"pmem": 0.0, "pcpu": 110.6, "rss": 1064194048, "vsz": 3646877696}, "averages": {"rss": 940564260.5714284, "vsz": 3526846390.8571424, "pmem": 0.0, "pcpu": 106.11071428571431, "num_samples": 56}}
{"timestamp": "2025-10-10T00:22:19.399980+02:00", "num_samples": 57, "processes": {"4162496": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:22:15.123416+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "4162497": {"pcpu": 133.0, "pmem": 0.0, "rss": 45957120, "vsz": 992976896, "timestamp": "2025-10-10T00:22:15.123426+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "4077798": {"pcpu": 1.3, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:22:19.399943+02:00", "etime": "24:00", "stat": {"Sl": 57}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4078698": {"pcpu": 8.1, "pmem": 0.0, "rss": 491921408, "vsz": 1352052736, "timestamp": "2025-10-10T00:22:19.399958+02:00", "etime": "23:41", "stat": {"S": 53, "R": 4}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:22:19.399881+02:00", "etime": "24:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}, "4157464": {"pcpu": 0.0, "pmem": 0.0, "rss": 1515520, "vsz": 2961408, "timestamp": "2025-10-10T00:22:11.909126+02:00", "etime": "01:17", "stat": {"S": 50}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4157465": {"pcpu": 96.4, "pmem": 0.0, "rss": 264847360, "vsz": 316305408, "timestamp": "2025-10-10T00:22:11.909136+02:00", "etime": "01:17", "stat": {"Rl": 50}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/SharpenEPI/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/730a3e8c73c8bce1f781fe4069f0fb2c483326ba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "4162618": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:22:16.199051+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "4162620": {"pcpu": 200.0, "pmem": 0.0, "rss": 6017024, "vsz": 12009472, "timestamp": "2025-10-10T00:22:16.199062+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}, "4162909": {"pcpu": 0.0, "pmem": 0.0, "rss": 1732608, "vsz": 2961408, "timestamp": "2025-10-10T00:22:19.399970+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- 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/tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/drift/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.nii.gz sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_denoised.nii.gz"}, "4165766": {"pcpu": 96.4, "pmem": 0.0, "rss": 329564160, "vsz": 404918272, "timestamp": "2025-10-10T00:23:22.377906+02:00", "etime": "00:19", "stat": {"Sl": 2, "R": 1}, "cmd": "dwidenoise -mask /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b8e8060be7d54ed19f0a034820005f91d4b41122/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -noise noisemap.nii.gz -nthreads 1 /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/drift/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.nii.gz sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_denoised.nii.gz"}, "4077798": {"pcpu": 1.2, "pmem": 0.0, "rss": 328433664, "vsz": 876199936, "timestamp": "2025-10-10T00:24:18.758083+02:00", "etime": 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PriorProbabilityImages[3,/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/format_tpm_names/priors_%02d.nii.gz,0.1] --intensity-image /tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/apply_mask/clipped_corrected_enhanced_masked.nii.gz --mask-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz --mrf [0.01,1x1x1] --output [segment.nii.gz,segment_%02d.nii.gz] --use-random-seed 1"}, "4178450": {"pcpu": 100.0, "pmem": 0.1, "rss": 554741760, "vsz": 632913920, "timestamp": "2025-10-10T00:27:18.486760+02:00", "etime": "00:03", "stat": {"Rl": 4}, "cmd": "Atropos --image-dimensionality 3 --initialization PriorProbabilityImages[3,/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/format_tpm_names/priors_%02d.nii.gz,0.1] --intensity-image /tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/apply_mask/clipped_corrected_enhanced_masked.nii.gz --mask-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2b8225e5c9ea0edc0cf05a43854fa4944f3067d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz --mrf [0.01,1x1x1] --output [segment.nii.gz,segment_%02d.nii.gz] --use-random-seed 1"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:27:18.486658+02:00", "etime": "29:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.1, "pcpu": 112.5, "rss": 1333256192, "vsz": 3941371904}, "averages": {"rss": 957725769.1428571, "vsz": 3518201563.428571, "pmem": 0.017857142857142856, "pcpu": 42.99464285714285, "num_samples": 56}}
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/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b8e8060be7d54ed19f0a034820005f91d4b41122/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.nii.gz"}, "4077798": {"pcpu": 1.4, "pmem": 0.0, "rss": 328683520, "vsz": 876441600, "timestamp": "2025-10-10T00:33:18.394462+02:00", "etime": "34:59", "stat": {"Sl": 55, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:33:18.394452+02:00", "etime": "34:59", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 11.5, "pmem": 0.1, "rss": 557137920, "vsz": 1274703872, "timestamp": "2025-10-10T00:33:18.394472+02:00", "etime": "34:40", "stat": {"S": 54, "R": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc 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/tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/2a7574162ad3bff6093acf95c24f9091e90682a8/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull.nii.gz"}, "4185967": {"pcpu": 96.6, "pmem": 0.0, "rss": 159723520, "vsz": 166920192, "timestamp": "2025-10-10T00:32:55.359374+02:00", "etime": "03:08", "stat": {"R": 34}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/2a7574162ad3bff6093acf95c24f9091e90682a8/averages/mapflow/_averages0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/2a7574162ad3bff6093acf95c24f9091e90682a8/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_nodriftfull.nii.gz"}}, "totals": {"pmem": 0.1, "pcpu": 112.7, "rss": 1005023232, "vsz": 3536941056}, "averages": {"rss": 954471862.857143, "vsz": 3484192621.714287, "pmem": 0.0017857142857142854, "pcpu": 81.71785714285716, "num_samples": 56}}
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{"timestamp": "2025-10-10T00:37:18.575330+02:00", "num_samples": 56, "processes": {"1907": {"pcpu": 0.0, "pmem": 0.0, "rss": 1703936, "vsz": 2961408, "timestamp": "2025-10-10T00:36:24.631272+02:00", "etime": "03:11", "stat": {"S": 5}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/averages/mapflow/_averages0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b8e8060be7d54ed19f0a034820005f91d4b41122/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.nii.gz"}, "1908": {"pcpu": 96.3, "pmem": 0.0, "rss": 154308608, "vsz": 160641024, "timestamp": "2025-10-10T00:36:24.631340+02:00", "etime": "03:11", "stat": {"R": 5}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/b8e8060be7d54ed19f0a034820005f91d4b41122/averages/mapflow/_averages0/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/b8e8060be7d54ed19f0a034820005f91d4b41122/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_nodriftfull.nii.gz"}, "4077798": {"pcpu": 1.3, "pmem": 0.0, "rss": 328683520, "vsz": 876441600, "timestamp": "2025-10-10T00:37:18.575320+02:00", "etime": "39:00", "stat": {"Sl": 54, "Rl": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "4077782": {"pcpu": 0.0, "pmem": 0.0, "rss": 18419712, "vsz": 1276993536, "timestamp": "2025-10-10T00:37:18.575309+02:00", "etime": "39:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "4078698": {"pcpu": 10.3, "pmem": 0.2, "rss": 1145294848, "vsz": 1915506688, "timestamp": "2025-10-10T00:37:18.575330+02:00", "etime": "38:40", "stat": {"S": 53, "R": 3}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIVs035 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "13660": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:37:18.575241+02:00", "etime": "00:35", "stat": {"S": 34}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/averages/mapflow/_averages0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull.nii.gz"}, "13661": {"pcpu": 98.1, "pmem": 0.0, "rss": 212873216, "vsz": 219766784, "timestamp": "2025-10-10T00:37:18.575297+02:00", "etime": "00:35", "stat": {"R": 34}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/averages/mapflow/_averages0/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/109f89ad29d71cf73bd1c9f0b07a180c516b815f/motion_correct/sub-cIVs035_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_nodriftfull.nii.gz"}}, "totals": {"pmem": 0.2, "pcpu": 109.69999999999999, "rss": 1492398080, "vsz": 4068941824}, "averages": {"rss": 998625572.5714285, "vsz": 3531436763.428571, "pmem": 0.0071428571428571435, "pcpu": 78.71785714285713, "num_samples": 56}}
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