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ds003416-mriqc/logs/duct/sub-cIIIs07_2025.10.10T00.12.18-2183402_usage.json
Felix Hoffstaedter b04cfa055b [DATALAD RUNCMD] Compute MRIQC for sub-cIIIs07 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "aae8905a-985f-46fb-91f5-35c772654ddd",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-cIIIs07",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 00:46:52 +02:00

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{"timestamp": "2025-10-10T00:12:18.350489+02:00", "num_samples": 1, "processes": {"2183679": {"pcpu": 100.0, "pmem": 0.0, "rss": 36290560, "vsz": 1120673792, "timestamp": "2025-10-10T00:12:18.350489+02:00", "etime": "00:00", "stat": {"Ssl": 1}, "cmd": "singularity exec -W /tmp/singtmp.JmgmrH -B /var/lib/condor/execute/dir_2143515/ds/code/containers/binds/zoneinfo/UTC:/etc/localtime -B /tmp/singtmp.JmgmrH/tmp:/tmp -B /tmp/singtmp.JmgmrH/var/tmp:/var/tmp -e -B /var/lib/condor/execute/dir_2143515/ds -H /var/lib/condor/execute/dir_2143515/ds/code/containers/binds/HOME --pwd /var/lib/condor/execute/dir_2143515/ds code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}}, "totals": {"pmem": 0.0, "pcpu": 100.0, "rss": 36290560, "vsz": 1120673792}, "averages": {"rss": 36290560, "vsz": 1120673792, "pmem": 0.0, "pcpu": 100.0, "num_samples": 1}}
{"timestamp": "2025-10-10T00:13:18.558846+02:00", "num_samples": 57, "processes": {"2183696": {"pcpu": 79.7, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:13:18.558834+02:00", "etime": "00:59", "stat": {"D": 2, "S": 8, "R": 4, "Sl": 40, "Rl": 3}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183747": {"pcpu": 36.1, "pmem": 0.0, "rss": 300826624, "vsz": 829177856, "timestamp": "2025-10-10T00:12:32.244340+02:00", "etime": "00:11", "stat": {"Sl": 11}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183798": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:12:25.818081+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c antsRegistration --version"}, "2183799": {"pcpu": 100.0, "pmem": 0.0, "rss": 9318400, "vsz": 103976960, "timestamp": "2025-10-10T00:12:25.818087+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "antsRegistration --version"}, "2183752": {"pcpu": 100.0, "pmem": 0.0, "rss": 304340992, "vsz": 873619456, "timestamp": "2025-10-10T00:12:29.038181+02:00", "etime": "00:07", "stat": {"R": 4, "S": 4}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2184123": {"pcpu": 50.0, "pmem": 0.0, "rss": 977448960, "vsz": 1702866944, "timestamp": "2025-10-10T00:13:18.558846+02:00", "etime": "00:44", "stat": {"S": 27, "R": 16}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 2.8, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:13:18.558749+02:00", "etime": "01:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 207.7, "rss": 1326424064, "vsz": 3855953920}, "averages": {"rss": 707612097.1228069, "vsz": 3236483790.5964904, "pmem": 0.0, "pcpu": 62.13333333333335, "num_samples": 57}}
{"timestamp": "2025-10-10T00:14:19.186191+02:00", "num_samples": 57, "processes": {"2183696": {"pcpu": 12.0, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:14:19.186166+02:00", "etime": "02:00", "stat": {"Rl": 2, "Sl": 55}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2185336": {"pcpu": 0.0, "pmem": 0.0, "rss": 1642496, "vsz": 2961408, "timestamp": "2025-10-10T00:14:19.186185+02:00", "etime": "00:55", "stat": {"S": 52}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2185337": {"pcpu": 101.0, "pmem": 0.0, "rss": 207933440, "vsz": 272293888, "timestamp": "2025-10-10T00:14:19.186191+02:00", "etime": "00:55", "stat": {"Rl": 52}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2184123": {"pcpu": 37.9, "pmem": 0.0, "rss": 536481792, "vsz": 1262567424, "timestamp": "2025-10-10T00:14:19.186177+02:00", "etime": "01:45", "stat": {"S": 55, "R": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:14:19.186119+02:00", "etime": "02:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 148.8, "rss": 1007304704, "vsz": 3602849792}, "averages": {"rss": 990453041.4035088, "vsz": 3580236279.017544, "pmem": 0.0, "pcpu": 122.97543859649126, "num_samples": 57}}
{"timestamp": "2025-10-10T00:15:18.600691+02:00", "num_samples": 56, "processes": {"2183696": {"pcpu": 6.2, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:15:18.600680+02:00", "etime": "02:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2185336": {"pcpu": 0.0, "pmem": 0.0, "rss": 1642496, "vsz": 2961408, "timestamp": "2025-10-10T00:15:08.210583+02:00", "etime": "01:44", "stat": {"S": 46}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2185337": {"pcpu": 96.8, "pmem": 0.0, "rss": 251084800, "vsz": 321286144, "timestamp": "2025-10-10T00:15:08.210591+02:00", "etime": "01:44", "stat": {"Rl": 46}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2184123": {"pcpu": 17.4, "pmem": 0.0, "rss": 496660480, "vsz": 1222746112, "timestamp": "2025-10-10T00:15:18.600691+02:00", "etime": "02:44", "stat": {"S": 55, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:15:18.600626+02:00", "etime": "03:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 120.39999999999999, "rss": 1050456064, "vsz": 3651842048}, "averages": {"rss": 972844397.7142857, "vsz": 3556721517.7142844, "pmem": 0.0, "pcpu": 98.57857142857144, "num_samples": 56}}
{"timestamp": "2025-10-10T00:16:18.490269+02:00", "num_samples": 56, "processes": {"2183696": {"pcpu": 4.5, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:16:18.490244+02:00", "etime": "03:59", "stat": {"Rl": 1, "Sl": 55}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2189401": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:16:18.490263+02:00", "etime": "00:04", "stat": {"S": 5}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz"}, "2189402": {"pcpu": 102.0, "pmem": 0.0, "rss": 60067840, "vsz": 122851328, "timestamp": "2025-10-10T00:16:18.490269+02:00", "etime": "00:04", "stat": {"Rl": 5}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz"}, "2184123": {"pcpu": 12.7, "pmem": 0.0, "rss": 729034752, "vsz": 1595523072, "timestamp": "2025-10-10T00:16:18.490255+02:00", "etime": "03:44", "stat": {"S": 53, "R": 3}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2188253": {"pcpu": 0.0, "pmem": 0.0, "rss": 1630208, "vsz": 2961408, "timestamp": "2025-10-10T00:16:11.046595+02:00", "etime": "00:45", "stat": {"S": 43}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2188254": {"pcpu": 95.7, "pmem": 0.4, "rss": 9614327808, "vsz": 12592988160, "timestamp": "2025-10-10T00:16:11.046602+02:00", "etime": "00:45", "stat": {"R": 43}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:16:18.490206+02:00", "etime": "04:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.4, "pcpu": 115.8, "rss": 10394869760, "vsz": 15904260096}, "averages": {"rss": 4053362102.8571424, "vsz": 9113515227.428568, "pmem": 0.11964285714285713, "pcpu": 96.62142857142855, "num_samples": 56}}
{"timestamp": "2025-10-10T00:17:19.106610+02:00", "num_samples": 57, "processes": {"2190883": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:17:19.106603+02:00", "etime": "00:09", "stat": {"S": 9}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.nii.gz"}, "2190884": {"pcpu": 101.0, "pmem": 0.0, "rss": 61112320, "vsz": 67751936, "timestamp": "2025-10-10T00:17:19.106610+02:00", "etime": "00:09", "stat": {"R": 9}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.nii.gz"}, "2190087": {"pcpu": 0.0, "pmem": 0.0, "rss": 1716224, "vsz": 2961408, "timestamp": "2025-10-10T00:16:42.899363+02:00", "etime": "00:05", "stat": {"S": 5}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz"}, "2190088": {"pcpu": 101.0, "pmem": 0.0, "rss": 60354560, "vsz": 122851328, "timestamp": "2025-10-10T00:16:42.899370+02:00", "etime": "00:05", "stat": {"Rl": 5}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz"}, "2190696": {"pcpu": 0.0, "pmem": 0.0, "rss": 1712128, "vsz": 2961408, "timestamp": "2025-10-10T00:17:07.412759+02:00", "etime": "00:05", "stat": {"S": 6}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz"}, "2190697": {"pcpu": 103.0, "pmem": 0.0, "rss": 60145664, "vsz": 122851328, "timestamp": "2025-10-10T00:17:07.412766+02:00", "etime": "00:05", "stat": {"Rl": 6}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz"}, "2183696": {"pcpu": 3.6, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:17:19.106585+02:00", "etime": "05:00", "stat": {"Sl": 56, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2190143": {"pcpu": 108.0, "pmem": 0.0, "rss": 55496704, "vsz": 62435328, "timestamp": "2025-10-10T00:16:57.794925+02:00", "etime": "00:12", "stat": {"R": 12}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset.nii.gz"}, "2184123": {"pcpu": 9.9, "pmem": 0.0, "rss": 429936640, "vsz": 1155223552, "timestamp": "2025-10-10T00:17:19.106595+02:00", "etime": "04:45", "stat": {"R": 3, "S": 54}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2189724": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:16:34.482245+02:00", "etime": "00:12", "stat": {"S": 12}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset.nii.gz"}, "2189725": {"pcpu": 101.0, "pmem": 0.0, "rss": 55279616, "vsz": 62435328, "timestamp": "2025-10-10T00:16:34.482252+02:00", "etime": "00:12", "stat": {"R": 12}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_subset.nii.gz"}, "2190142": {"pcpu": 0.0, "pmem": 0.0, "rss": 1699840, "vsz": 2961408, "timestamp": "2025-10-10T00:16:57.794917+02:00", "etime": "00:12", "stat": {"S": 12}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_subset.nii.gz"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:17:19.106518+02:00", "etime": "05:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 120.6, "rss": 841330688, "vsz": 3434123264}, "averages": {"rss": 822498573.4736841, "vsz": 3369048818.5263157, "pmem": 0.0, "pcpu": 88.0, "num_samples": 57}}
{"timestamp": "2025-10-10T00:18:18.617376+02:00", "num_samples": 56, "processes": {"2191617": {"pcpu": 0.0, "pmem": 0.0, "rss": 1642496, "vsz": 2961408, "timestamp": "2025-10-10T00:17:54.182240+02:00", "etime": "00:16", "stat": {"S": 16}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset.nii.gz"}, "2191618": {"pcpu": 105.0, "pmem": 0.0, "rss": 60977152, "vsz": 67751936, "timestamp": "2025-10-10T00:17:54.182247+02:00", "etime": "00:16", "stat": {"R": 16}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_subset.nii.gz"}, "2190883": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:17:26.574258+02:00", "etime": "00:16", "stat": {"S": 7}, "cmd": "/bin/sh -c 3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.nii.gz"}, "2190884": {"pcpu": 96.8, "pmem": 0.0, "rss": 62291968, "vsz": 70459392, "timestamp": "2025-10-10T00:17:26.574265+02:00", "etime": "00:16", "stat": {"R": 7}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset_md.1D /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/hmc_b0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_subset.nii.gz"}, "2192002": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:18:14.398524+02:00", "etime": "00:18", "stat": {"S": 18}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2192003": {"pcpu": 102.0, "pmem": 0.0, "rss": 557563904, "vsz": 620445696, "timestamp": "2025-10-10T00:18:14.398532+02:00", "etime": "00:18", "stat": {"Rl": 18}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2192683": {"pcpu": 0.0, "pmem": 0.0, "rss": 1286144, "vsz": 2961408, "timestamp": "2025-10-10T00:18:18.617369+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c 3dFWHMx -ShowMeClassicFWHM -combine -detrend -input /tmp/mriqc_wf/anatMRIQC/55958dc169743fd6d666b6d641859b94524961c5/conform/sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed.nii.gz -mask /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -detprefix sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_detrend -out sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_subbricks.out > sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_fwhmx.out"}, "2192684": {"pcpu": 101.0, "pmem": 0.0, "rss": 113451008, "vsz": 124403712, "timestamp": "2025-10-10T00:18:18.617376+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "3dFWHMx -ShowMeClassicFWHM -combine -detrend -input /tmp/mriqc_wf/anatMRIQC/55958dc169743fd6d666b6d641859b94524961c5/conform/sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed.nii.gz -mask /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -detprefix sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_detrend -out sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_subbricks.out"}, "2183696": {"pcpu": 3.1, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:18:18.617350+02:00", "etime": "05:59", "stat": {"Sl": 55, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2184123": {"pcpu": 8.3, "pmem": 0.0, "rss": 477507584, "vsz": 1203462144, "timestamp": "2025-10-10T00:18:18.617361+02:00", "etime": "05:44", "stat": {"S": 55, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2191293": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:17:35.026127+02:00", "etime": "00:05", "stat": {"S": 5}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz"}, "2191294": {"pcpu": 100.0, "pmem": 0.0, "rss": 60067840, "vsz": 122851328, "timestamp": "2025-10-10T00:17:35.026134+02:00", "etime": "00:05", "stat": {"Rl": 5}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/584404c66e2dfa29edee927fc6af204539292f42/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average.nii.gz --output sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:18:18.617283+02:00", "etime": "06:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 116.1, "rss": 1338224640, "vsz": 3931717632}, "averages": {"rss": 913370697.1428573, "vsz": 3472725869.714285, "pmem": 0.0, "pcpu": 92.57142857142857, "num_samples": 56}}
{"timestamp": "2025-10-10T00:19:19.226705+02:00", "num_samples": 57, "processes": {"2193156": {"pcpu": 0.0, "pmem": 0.0, "rss": 1642496, "vsz": 2961408, "timestamp": "2025-10-10T00:18:51.572060+02:00", "etime": "00:05", "stat": {"S": 6}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2193157": {"pcpu": 102.0, "pmem": 0.0, "rss": 76705792, "vsz": 139124736, "timestamp": "2025-10-10T00:18:51.572067+02:00", "etime": "00:05", "stat": {"Rl": 6}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2192774": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:18:34.590106+02:00", "etime": "00:04", "stat": {"S": 5}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2192775": {"pcpu": 103.0, "pmem": 0.0, "rss": 60145664, "vsz": 122855424, "timestamp": "2025-10-10T00:18:34.590112+02:00", "etime": "00:04", "stat": {"Rl": 5}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2193094": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:18:43.078120+02:00", "etime": "00:05", "stat": {"S": 5}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2193095": {"pcpu": 100.0, "pmem": 0.0, "rss": 60272640, "vsz": 122855424, "timestamp": "2025-10-10T00:18:43.078126+02:00", "etime": "00:05", "stat": {"Rl": 5}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2192683": {"pcpu": 0.0, "pmem": 0.0, "rss": 1286144, "vsz": 2961408, "timestamp": "2025-10-10T00:18:20.747539+02:00", "etime": "00:02", "stat": {"S": 2}, "cmd": "/bin/sh -c 3dFWHMx -ShowMeClassicFWHM -combine -detrend -input /tmp/mriqc_wf/anatMRIQC/55958dc169743fd6d666b6d641859b94524961c5/conform/sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed.nii.gz -mask /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -detprefix sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_detrend -out sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_subbricks.out > sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_fwhmx.out"}, "2192684": {"pcpu": 98.3, "pmem": 0.0, "rss": 113451008, "vsz": 124403712, "timestamp": "2025-10-10T00:18:20.747546+02:00", "etime": "00:02", "stat": {"R": 2}, "cmd": "3dFWHMx -ShowMeClassicFWHM -combine -detrend -input /tmp/mriqc_wf/anatMRIQC/55958dc169743fd6d666b6d641859b94524961c5/conform/sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed.nii.gz -mask /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -detprefix sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_detrend -out sub-cIIIs07_ses-s1Bx1_acq-r10x10x10_T1w_conformed_subbricks.out"}, "2183696": {"pcpu": 2.7, "pmem": 0.0, "rss": 328732672, "vsz": 876093440, "timestamp": "2025-10-10T00:19:19.226678+02:00", "etime": "07:00", "stat": {"Sl": 56, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2193522": {"pcpu": 0.0, "pmem": 0.0, "rss": 1310720, "vsz": 2961408, "timestamp": "2025-10-10T00:18:58.990111+02:00", "etime": "00:05", "stat": {"S": 5}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2193523": {"pcpu": 101.0, "pmem": 0.0, "rss": 60116992, "vsz": 122855424, "timestamp": "2025-10-10T00:18:58.990117+02:00", "etime": "00:05", "stat": {"Rl": 5}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_clip/clipped.nii.gz --output clipped_corrected.nii.gz -r"}, "2193908": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:19:19.226697+02:00", "etime": "00:14", "stat": {"S": 14}, "cmd": "/bin/sh -c antsAffineInitializer 3 /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2193909": {"pcpu": 99.0, "pmem": 0.0, "rss": 491417600, "vsz": 558510080, "timestamp": "2025-10-10T00:19:19.226705+02:00", "etime": "00:14", "stat": {"Rl": 14}, "cmd": "antsAffineInitializer 3 /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2184123": {"pcpu": 9.2, "pmem": 0.0, "rss": 777412608, "vsz": 1513848832, "timestamp": "2025-10-10T00:19:19.226689+02:00", "etime": "06:45", "stat": {"S": 49, "R": 8}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:19:19.226612+02:00", "etime": "07:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 114.9, "rss": 1300348928, "vsz": 3898585088}, "averages": {"rss": 940433911.017544, "vsz": 3509658462.31579, "pmem": 0.0, "pcpu": 74.80350877192981, "num_samples": 57}}
{"timestamp": "2025-10-10T00:20:18.513162+02:00", "num_samples": 55, "processes": {"2195458": {"pcpu": 0.0, "pmem": 0.0, "rss": 1716224, "vsz": 2961408, "timestamp": "2025-10-10T00:20:06.430322+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "2195459": {"pcpu": 110.0, "pmem": 0.0, "rss": 11550720, "vsz": 18243584, "timestamp": "2025-10-10T00:20:06.430328+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}, "2195398": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:20:04.294876+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2195399": {"pcpu": 97.9, "pmem": 0.0, "rss": 77221888, "vsz": 1051557888, "timestamp": "2025-10-10T00:20:04.294883+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2195528": {"pcpu": 0.0, "pmem": 0.0, "rss": 1728512, "vsz": 2961408, "timestamp": "2025-10-10T00:20:09.656018+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2195529": {"pcpu": 136.0, "pmem": 0.0, "rss": 60555264, "vsz": 1004453888, "timestamp": "2025-10-10T00:20:09.656025+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2183696": {"pcpu": 2.5, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:20:18.513134+02:00", "etime": "07:59", "stat": {"Sl": 55}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2195039": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:20:01.057492+02:00", "etime": "00:10", "stat": {"S": 10}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2195040": {"pcpu": 100.0, "pmem": 0.0, "rss": 502235136, "vsz": 554364928, "timestamp": "2025-10-10T00:20:01.057499+02:00", "etime": "00:10", "stat": {"Rl": 10}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/55958dc169743fd6d666b6d641859b94524961c5/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2195692": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:20:18.513154+02:00", "etime": "00:02", "stat": {"S": 3}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2195693": {"pcpu": 300.0, "pmem": 0.0, "rss": 1613475840, "vsz": 4616982528, "timestamp": "2025-10-10T00:20:18.513162+02:00", "etime": "00:02", "stat": {"R": 3}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2195567": {"pcpu": 0.0, "pmem": 0.0, "rss": 1224704, "vsz": 2961408, "timestamp": "2025-10-10T00:20:11.795631+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - 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{"timestamp": "2025-10-10T00:21:18.656877+02:00", "num_samples": 56, "processes": {"2197190": {"pcpu": 0.0, "pmem": 0.0, "rss": 1224704, "vsz": 2961408, "timestamp": "2025-10-10T00:21:18.656870+02:00", "etime": "00:06", "stat": {"S": 7}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2197191": {"pcpu": 107.0, "pmem": 0.1, "rss": 2856980480, "vsz": 6027841536, "timestamp": "2025-10-10T00:21:18.656877+02:00", "etime": "00:06", "stat": {"R": 7}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2195692": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:20:42.066307+02:00", "etime": "00:26", "stat": {"S": 22}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2195693": {"pcpu": 96.8, "pmem": 0.2, "rss": 6309691392, "vsz": 9284759552, "timestamp": "2025-10-10T00:20:42.066315+02:00", "etime": "00:26", "stat": {"R": 22}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2196398": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:21:09.918244+02:00", "etime": "00:26", "stat": {"S": 25}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2196399": {"pcpu": 110.0, "pmem": 0.2, "rss": 6319673344, "vsz": 9288716288, "timestamp": "2025-10-10T00:21:09.918251+02:00", "etime": "00:26", "stat": {"R": 25}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2183696": {"pcpu": 2.3, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:21:18.656850+02:00", "etime": "08:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2184123": {"pcpu": 8.7, "pmem": 0.0, "rss": 497766400, "vsz": 1221857280, "timestamp": "2025-10-10T00:21:18.656862+02:00", "etime": "08:44", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:21:18.656778+02:00", "etime": "09:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.2, "pcpu": 120.5, "rss": 7168172032, "vsz": 12666757120}, "averages": {"rss": 3649758427.428571, "vsz": 9247728786.285715, "pmem": 0.08035714285714282, "pcpu": 103.67142857142856, "num_samples": 56}}
{"timestamp": "2025-10-10T00:22:18.528177+02:00", "num_samples": 56, "processes": {"2197952": {"pcpu": 113.0, "pmem": 0.2, "rss": 6310072320, "vsz": 9288855552, "timestamp": "2025-10-10T00:22:05.817957+02:00", "etime": "00:25", "stat": {"R": 25}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2198756": {"pcpu": 0.0, "pmem": 0.0, "rss": 1626112, "vsz": 2961408, "timestamp": "2025-10-10T00:22:18.528169+02:00", "etime": "00:02", "stat": {"S": 3}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2198757": {"pcpu": 100.0, "pmem": 0.0, "rss": 92147712, "vsz": 148774912, "timestamp": "2025-10-10T00:22:18.528177+02:00", "etime": "00:02", "stat": {"Rl": 3}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2197190": {"pcpu": 0.0, "pmem": 0.0, "rss": 1224704, "vsz": 2961408, "timestamp": "2025-10-10T00:21:37.935670+02:00", "etime": "00:26", "stat": {"S": 18}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2197191": {"pcpu": 96.3, "pmem": 0.2, "rss": 6305517568, "vsz": 9288716288, "timestamp": "2025-10-10T00:21:37.935677+02:00", "etime": "00:26", "stat": {"R": 18}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}, "2198695": {"pcpu": 0.0, "pmem": 0.0, "rss": 1220608, "vsz": 2961408, "timestamp": "2025-10-10T00:22:09.025947+02:00", "etime": "00:01", "stat": {"S": 1}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2198696": {"pcpu": 100.0, "pmem": 0.0, "rss": 63377408, "vsz": 126140416, "timestamp": "2025-10-10T00:22:09.025958+02:00", "etime": "00:01", "stat": {"Rl": 1}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:22:18.528088+02:00", "etime": "10:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "2183696": {"pcpu": 2.0, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:22:18.528146+02:00", "etime": "09:59", "stat": {"Sl": 55, "Rl": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2184123": {"pcpu": 7.8, "pmem": 0.0, "rss": 1006796800, "vsz": 1731252224, "timestamp": "2025-10-10T00:22:18.528157+02:00", "etime": "09:44", "stat": {"S": 52, "R": 4}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2197951": {"pcpu": 0.0, "pmem": 0.0, "rss": 1732608, "vsz": 2961408, "timestamp": "2025-10-10T00:22:05.817950+02:00", "etime": "00:25", "stat": {"S": 25}, "cmd": "/bin/sh -c synthstrip -b 1 -i /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_n4/clipped_corrected.nii.gz --model /opt/freesurfer/models/synthstrip.1.pt -n 1 -o clipped_corrected_desc-brain.nii.gz -m clipped_corrected_desc-brain_mask.nii.gz"}}, "totals": {"pmem": 0.2, "pcpu": 122.5, "rss": 7158546432, "vsz": 12666896384}, "averages": {"rss": 3294174208.000001, "vsz": 8299317174.857142, "pmem": 0.06785714285714287, "pcpu": 90.63928571428568, "num_samples": 56}}
{"timestamp": "2025-10-10T00:23:18.394481+02:00", "num_samples": 56, "processes": {"2183696": {"pcpu": 1.9, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:23:18.394455+02:00", "etime": "10:59", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2198756": {"pcpu": 0.0, "pmem": 0.0, "rss": 1626112, "vsz": 2961408, "timestamp": "2025-10-10T00:22:35.632360+02:00", "etime": "00:19", "stat": {"S": 16}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2198757": {"pcpu": 97.2, "pmem": 0.0, "rss": 92147712, "vsz": 148774912, "timestamp": "2025-10-10T00:22:35.632367+02:00", "etime": "00:19", "stat": {"Rl": 16}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2199400": {"pcpu": 0.0, "pmem": 0.0, "rss": 1282048, "vsz": 2961408, "timestamp": "2025-10-10T00:23:18.394474+02:00", "etime": "00:42", "stat": {"S": 40}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2199401": {"pcpu": 101.0, "pmem": 0.0, "rss": 265089024, "vsz": 316305408, "timestamp": "2025-10-10T00:23:18.394481+02:00", "etime": "00:42", "stat": {"Rl": 40}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2184123": {"pcpu": 7.3, "pmem": 0.0, "rss": 455536640, "vsz": 1178877952, "timestamp": "2025-10-10T00:23:18.394466+02:00", "etime": "10:44", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:23:18.394393+02:00", "etime": "11:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 110.0, "rss": 1070882816, "vsz": 3651366912}, "averages": {"rss": 1006981485.7142857, "vsz": 3589216109.714285, "pmem": 0.0, "pcpu": 105.68928571428573, "num_samples": 56}}
{"timestamp": "2025-10-10T00:24:19.299934+02:00", "num_samples": 57, "processes": {"2201157": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:23:35.483722+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c cwebp -quiet -noalpha -q 80 -o - -- -"}, "2201158": {"pcpu": 112.0, "pmem": 0.0, "rss": 11427840, "vsz": 18243584, "timestamp": "2025-10-10T00:23:35.483729+02:00", "etime": "00:00", "stat": {"R": 1}, "cmd": "cwebp -quiet -noalpha -q 80 -o - -- -"}, "2202186": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:24:19.299927+02:00", "etime": "00:07", "stat": {"S": 8}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2201227": {"pcpu": 0.0, "pmem": 0.0, "rss": 1757184, "vsz": 2961408, "timestamp": "2025-10-10T00:23:38.696139+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2201228": {"pcpu": 112.0, "pmem": 0.0, "rss": 54673408, "vsz": 997896192, "timestamp": "2025-10-10T00:23:38.696146+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2201101": {"pcpu": 0.0, "pmem": 0.0, "rss": 1630208, "vsz": 2961408, "timestamp": "2025-10-10T00:23:33.346553+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2201102": {"pcpu": 109.0, "pmem": 0.0, "rss": 70258688, "vsz": 1051070464, "timestamp": "2025-10-10T00:23:33.346562+02:00", "etime": "00:00", "stat": {"Sl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2201355": {"pcpu": 0.0, "pmem": 0.0, "rss": 1630208, "vsz": 2961408, "timestamp": "2025-10-10T00:23:45.134261+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2183696": {"pcpu": 1.8, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:24:19.299907+02:00", "etime": "12:00", "stat": {"Sl": 57}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2201356": {"pcpu": 118.0, "pmem": 0.0, "rss": 63520768, "vsz": 126140416, "timestamp": "2025-10-10T00:23:45.134271+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2202187": {"pcpu": 100.0, "pmem": 0.0, "rss": 208969728, "vsz": 260456448, "timestamp": "2025-10-10T00:24:19.299934+02:00", "etime": "00:07", "stat": {"Rl": 8}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2199400": {"pcpu": 0.0, "pmem": 0.0, "rss": 1282048, "vsz": 2961408, "timestamp": "2025-10-10T00:23:31.190694+02:00", "etime": "00:55", "stat": {"S": 12}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2199401": {"pcpu": 96.5, "pmem": 0.0, "rss": 265089024, "vsz": 316305408, "timestamp": "2025-10-10T00:23:31.190701+02:00", "etime": "00:55", "stat": {"Rl": 12}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2201266": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:23:40.856408+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2201267": {"pcpu": 109.0, "pmem": 0.0, "rss": 81625088, "vsz": 1071759360, "timestamp": "2025-10-10T00:23:40.856415+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2184123": {"pcpu": 7.5, "pmem": 0.0, "rss": 986955776, "vsz": 1726316544, "timestamp": "2025-10-10T00:24:19.299919+02:00", "etime": "11:45", "stat": {"S": 49, "R": 8}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2201661": {"pcpu": 0.0, "pmem": 0.0, "rss": 1224704, "vsz": 2961408, "timestamp": "2025-10-10T00:24:10.738285+02:00", "etime": "00:20", "stat": {"S": 20}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2201662": {"pcpu": 102.0, "pmem": 0.0, "rss": 92344320, "vsz": 148774912, "timestamp": "2025-10-10T00:24:10.738291+02:00", "etime": "00:20", "stat": {"Rl": 20}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:24:19.299852+02:00", "etime": "12:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 127.0, "rss": 1335930880, "vsz": 4417994752}, "averages": {"rss": 932945560.7017543, "vsz": 3553815569.964912, "pmem": 0.0, "pcpu": 88.39649122807016, "num_samples": 57}}
{"timestamp": "2025-10-10T00:25:19.242387+02:00", "num_samples": 56, "processes": {"2202186": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:25:07.446375+02:00", "etime": "00:55", "stat": {"S": 45}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2202187": {"pcpu": 96.5, "pmem": 0.0, "rss": 264937472, "vsz": 316305408, "timestamp": "2025-10-10T00:25:07.446381+02:00", "etime": "00:55", "stat": {"Rl": 45}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2204111": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:25:19.242379+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2183696": {"pcpu": 1.7, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:25:19.242358+02:00", "etime": "13:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2204112": {"pcpu": 109.0, "pmem": 0.0, "rss": 69971968, "vsz": 1051062272, "timestamp": "2025-10-10T00:25:19.242387+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2203703": {"pcpu": 0.0, "pmem": 0.0, "rss": 1220608, "vsz": 2961408, "timestamp": "2025-10-10T00:25:11.718381+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2203704": {"pcpu": 125.0, "pmem": 0.0, "rss": 55164928, "vsz": 997986304, "timestamp": "2025-10-10T00:25:11.718389+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2184123": {"pcpu": 7.5, "pmem": 0.0, "rss": 469876736, "vsz": 1193218048, "timestamp": "2025-10-10T00:25:19.242371+02:00", "etime": "12:45", "stat": {"S": 50, "R": 6}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:25:19.242274+02:00", "etime": "13:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 133.6, "rss": 1071087616, "vsz": 4400463872}, "averages": {"rss": 1015176118.8571429, "vsz": 3619556352.0, "pmem": 0.0, "pcpu": 90.28750000000004, "num_samples": 56}}
{"timestamp": "2025-10-10T00:26:19.053161+02:00", "num_samples": 56, "processes": {"2204873": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:26:19.053153+02:00", "etime": "00:30", "stat": {"S": 29}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2204874": {"pcpu": 117.0, "pmem": 0.0, "rss": 264507392, "vsz": 316305408, "timestamp": "2025-10-10T00:26:19.053161+02:00", "etime": "00:30", "stat": {"Rl": 29}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2183696": {"pcpu": 1.6, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:26:19.053134+02:00", "etime": "14:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2204178": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:25:23.444142+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2204179": {"pcpu": 100.0, "pmem": 0.0, "rss": 79609856, "vsz": 142409728, "timestamp": "2025-10-10T00:25:23.444150+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2184123": {"pcpu": 7.7, "pmem": 0.0, "rss": 1250422784, "vsz": 1976541184, "timestamp": "2025-10-10T00:26:19.053145+02:00", "etime": "13:45", "stat": {"S": 54, "R": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2204221": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:25:48.012234+02:00", "etime": "00:20", "stat": {"S": 19}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2204222": {"pcpu": 101.0, "pmem": 0.0, "rss": 92143616, "vsz": 148774912, "timestamp": "2025-10-10T00:25:48.012242+02:00", "etime": "00:20", "stat": {"Rl": 19}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:26:19.053076+02:00", "etime": "14:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 126.0, "rss": 1599397888, "vsz": 4129763328}, "averages": {"rss": 993241453.7142859, "vsz": 3570800640.0, "pmem": 0.0, "pcpu": 95.88928571428573, "num_samples": 56}}
{"timestamp": "2025-10-10T00:27:18.847258+02:00", "num_samples": 56, "processes": {"2206473": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:26:52.228787+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2206474": {"pcpu": 122.0, "pmem": 0.0, "rss": 57196544, "vsz": 998653952, "timestamp": "2025-10-10T00:26:52.228795+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2204873": {"pcpu": 0.0, "pmem": 0.0, "rss": 1748992, "vsz": 2961408, "timestamp": "2025-10-10T00:26:42.549425+02:00", "etime": "00:53", "stat": {"S": 22}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2204874": {"pcpu": 96.5, "pmem": 0.0, "rss": 264507392, "vsz": 316305408, "timestamp": "2025-10-10T00:26:42.549432+02:00", "etime": "00:53", "stat": {"Rl": 22}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2206891": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:27:18.847251+02:00", "etime": "00:14", "stat": {"S": 14}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2206030": {"pcpu": 0.0, "pmem": 0.0, "rss": 1728512, "vsz": 2961408, "timestamp": "2025-10-10T00:26:44.694147+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2206031": {"pcpu": 113.0, "pmem": 0.0, "rss": 64974848, "vsz": 1005072384, "timestamp": "2025-10-10T00:26:44.694155+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2183696": {"pcpu": 1.5, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:27:18.847231+02:00", "etime": "15:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2206892": {"pcpu": 102.0, "pmem": 0.0, "rss": 92098560, "vsz": 148774912, "timestamp": "2025-10-10T00:27:18.847258+02:00", "etime": "00:14", "stat": {"Rl": 14}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:27:18.847162+02:00", "etime": "15:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}, "2206520": {"pcpu": 0.0, "pmem": 0.0, "rss": 1310720, "vsz": 2961408, "timestamp": "2025-10-10T00:26:54.400276+02:00", "etime": "00:00", "stat": {"S": 1}, "cmd": "/bin/sh -c svgo -i - -o - -q -p 3 --pretty"}, "2206521": {"pcpu": 109.0, "pmem": 0.0, "rss": 80941056, "vsz": 1054732288, "timestamp": "2025-10-10T00:26:54.400284+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2184123": {"pcpu": 7.8, "pmem": 0.0, "rss": 956616704, "vsz": 1946472448, "timestamp": "2025-10-10T00:27:18.847242+02:00", "etime": "14:45", "stat": {"S": 49, "R": 7}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2206558": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:26:57.582289+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}, "2206559": {"pcpu": 104.0, "pmem": 0.0, "rss": 79540224, "vsz": 142409728, "timestamp": "2025-10-10T00:26:57.582296+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "N4BiasFieldCorrection -d 3 --input-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/pre_clip/clipped.nii.gz --convergence [ 50x50x50x50 ] --output [ clipped_corrected.nii.gz, clipped_bias.nii.gz ] --weight-image /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz"}}, "totals": {"pmem": 0.0, "pcpu": 130.9, "rss": 1305591808, "vsz": 4404133888}, "averages": {"rss": 959058066.2857144, "vsz": 3580143981.714285, "pmem": 0.0, "pcpu": 80.83571428571429, "num_samples": 56}}
{"timestamp": "2025-10-10T00:28:18.722331+02:00", "num_samples": 56, "processes": {"2183696": {"pcpu": 1.4, "pmem": 0.0, "rss": 328732672, "vsz": 876228608, "timestamp": "2025-10-10T00:28:18.722305+02:00", "etime": "16:00", "stat": {"Sl": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2207300": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:28:18.722325+02:00", "etime": "00:54", "stat": {"S": 52}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2207301": {"pcpu": 103.0, "pmem": 0.0, "rss": 264441856, "vsz": 316305408, "timestamp": "2025-10-10T00:28:18.722331+02:00", "etime": "00:54", "stat": {"Rl": 52}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2184123": {"pcpu": 7.7, "pmem": 0.0, "rss": 469876736, "vsz": 1193218048, "timestamp": "2025-10-10T00:28:18.722316+02:00", "etime": "15:45", "stat": {"S": 56}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2206892": {"pcpu": 96.7, "pmem": 0.0, "rss": 92098560, "vsz": 148774912, "timestamp": "2025-10-10T00:27:23.122359+02:00", "etime": "00:19", "stat": {"Rl": 4}, "cmd": "antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2206891": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:27:23.122352+02:00", "etime": "00:19", "stat": {"S": 4}, "cmd": "/bin/sh -c antsAffineInitializer 3 /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz transform.mat 15.000000 0.100000 0 10"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:28:18.722266+02:00", "etime": "16:00", "stat": {"Ssl": 56}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 112.1, "rss": 1084600320, "vsz": 3665707008}, "averages": {"rss": 1055175899.4285715, "vsz": 3637078381.7142854, "pmem": 0.0, "pcpu": 105.63214285714287, "num_samples": 56}}
{"timestamp": "2025-10-10T00:29:19.339850+02:00", "num_samples": 57, "processes": {"2210049": {"pcpu": 0.0, "pmem": 0.0, "rss": 1638400, "vsz": 2961408, "timestamp": "2025-10-10T00:29:14.087604+02:00", "etime": "00:02", "stat": {"S": 2}, "cmd": "/bin/sh -c antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz --interpolation MultiLabel --output tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg_trans.nii.gz --reference-image /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average.nii.gz --transform /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/epi_to_mniInverseComposite.h5"}, "2210050": {"pcpu": 101.0, "pmem": 0.0, "rss": 114974720, "vsz": 179146752, "timestamp": "2025-10-10T00:29:14.087611+02:00", "etime": "00:02", "stat": {"Rl": 2}, "cmd": "antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz --interpolation MultiLabel --output tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg_trans.nii.gz --reference-image /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_average.nii.gz --transform /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/dfe2c252c30065623ce89c4a7e586a1a79e821a7/EPI2MNI/epi_to_mniInverseComposite.h5"}, "2209207": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:28:48.604468+02:00", "etime": "00:14", "stat": {"S": 14}, "cmd": "/bin/sh -c dwidenoise -mask /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -noise noisemap.nii.gz -nthreads 1 /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/drift/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull.nii.gz sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull_denoised.nii.gz"}, "2207300": {"pcpu": 0.0, "pmem": 0.0, "rss": 1306624, "vsz": 2961408, "timestamp": "2025-10-10T00:28:19.794483+02:00", "etime": "00:55", "stat": {"S": 1}, "cmd": "/bin/sh -c antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2207301": {"pcpu": 96.5, "pmem": 0.0, "rss": 213278720, "vsz": 264359936, "timestamp": "2025-10-10T00:28:19.794490+02:00", "etime": "00:55", "stat": {"Rl": 1}, "cmd": "antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/584404c66e2dfa29edee927fc6af204539292f42/SharpenEPI/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-206_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/584404c66e2dfa29edee927fc6af204539292f42/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1"}, "2209208": {"pcpu": 102.0, "pmem": 0.0, "rss": 329424896, "vsz": 404918272, "timestamp": "2025-10-10T00:28:48.604476+02:00", "etime": "00:14", "stat": {"Sl": 12, "Rl": 1, "R": 1}, "cmd": "dwidenoise -mask /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -noise noisemap.nii.gz -nthreads 1 /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/drift/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull.nii.gz sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_nodriftfull_denoised.nii.gz"}, "2184123": {"pcpu": 7.7, "pmem": 0.0, "rss": 469876736, "vsz": 1193218048, "timestamp": "2025-10-10T00:29:19.339835+02:00", "etime": "16:45", "stat": {"S": 51, "R": 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sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_denoised.nii.gz"}, "2209655": {"pcpu": 0.0, "pmem": 0.0, "rss": 1220608, "vsz": 2961408, "timestamp": "2025-10-10T00:29:09.850234+02:00", "etime": "00:13", "stat": {"S": 13}, "cmd": "/bin/sh -c dwidenoise -mask /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -noise noisemap.nii.gz -nthreads 1 /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/drift/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull.nii.gz sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull_denoised.nii.gz"}, "2209656": {"pcpu": 102.0, "pmem": 0.0, "rss": 329076736, "vsz": 404918272, "timestamp": "2025-10-10T00:29:09.850240+02:00", "etime": "00:13", "stat": {"Sl": 12, "R": 1}, "cmd": "dwidenoise -mask /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/dfe2c252c30065623ce89c4a7e586a1a79e821a7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -noise noisemap.nii.gz -nthreads 1 /tmp/mriqc_wf/dwiMRIQC/dfe2c252c30065623ce89c4a7e586a1a79e821a7/drift/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull.nii.gz sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-208_dwi_valid_nodriftfull_denoised.nii.gz"}, "2208825": {"pcpu": 114.0, "pmem": 0.0, "rss": 80928768, "vsz": 1054400512, "timestamp": "2025-10-10T00:28:27.307870+02:00", "etime": "00:00", "stat": {"Rl": 1}, "cmd": "node /opt/conda/bin/svgo -i - -o - -q -p 3 --pretty"}, "2209594": {"pcpu": 0.0, "pmem": 0.0, "rss": 1683456, "vsz": 2961408, "timestamp": "2025-10-10T00:28:51.782868+02:00", "etime": "00:01", "stat": {"S": 2}, "cmd": "/bin/sh -c antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz --interpolation MultiLabel --output tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg_trans.nii.gz --reference-image /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average.nii.gz --transform /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/epi_to_mniInverseComposite.h5"}, "2209595": {"pcpu": 101.0, "pmem": 0.0, "rss": 114778112, "vsz": 179150848, "timestamp": "2025-10-10T00:28:51.782875+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz --interpolation MultiLabel --output tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg_trans.nii.gz --reference-image /tmp/mriqc_wf/dwiMRIQC/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-105_dwi_valid_average.nii.gz --transform /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d2116da7bdadc5d8983bcde1f6e85f601dabb69d/EPI2MNI/epi_to_mniInverseComposite.h5"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:29:19.339762+02:00", "etime": "17:00", "stat": {"Ssl": 57}, "cmd": "Singularity runtime parent"}}, "totals": {"pmem": 0.0, "pcpu": 137.0, "rss": 1271218176, "vsz": 4403802112}, "averages": {"rss": 1002452740.491228, "vsz": 3608927034.3859653, "pmem": 0.0, "pcpu": 73.58771929824559, "num_samples": 57}}
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/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz --interpolation MultiLabel --output tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg_trans.nii.gz --reference-image /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz --transform /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/epi_to_mniInverseComposite.h5"}, "2210964": {"pcpu": 102.0, "pmem": 0.0, "rss": 115032064, "vsz": 179159040, "timestamp": "2025-10-10T00:29:48.042265+02:00", "etime": "00:01", "stat": {"Rl": 2}, "cmd": "antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg.nii.gz --interpolation MultiLabel --output tpl-MNI152NLin2009cAsym_res-01_desc-carpet_dseg_trans.nii.gz --reference-image /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/dwi_ref/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_average.nii.gz --transform /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0b99493ed2634281f17793dd6f27ff8a86e1c794/EPI2MNI/epi_to_mniInverseComposite.h5"}, "2210354": {"pcpu": 0.0, "pmem": 0.0, "rss": 1642496, "vsz": 2961408, "timestamp": "2025-10-10T00:29:43.819605+02:00", "etime": "00:25", "stat": {"S": 23}, "cmd": "/bin/sh -c dwidenoise -mask /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0b99493ed2634281f17793dd6f27ff8a86e1c794/synthstrip/clipped_corrected_desc-brain_mask.nii.gz -noise noisemap.nii.gz -nthreads 1 /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/drift/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.nii.gz sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_denoised.nii.gz"}, "2210355": {"pcpu": 97.0, "pmem": 0.0, "rss": 451059712, "vsz": 526778368, "timestamp": 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/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz --mrf [0.01,1x1x1] --output [segment.nii.gz,segment_%02d.nii.gz] --use-random-seed 1"}, "2214678": {"pcpu": 101.0, "pmem": 0.0, "rss": 575135744, "vsz": 646275072, "timestamp": "2025-10-10T00:32:19.158915+02:00", "etime": "00:03", "stat": {"Rl": 3}, "cmd": "Atropos --image-dimensionality 3 --initialization PriorProbabilityImages[3,/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/55958dc169743fd6d666b6d641859b94524961c5/format_tpm_names/priors_%02d.nii.gz,0.1] --intensity-image /tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/55958dc169743fd6d666b6d641859b94524961c5/apply_mask/clipped_corrected_enhanced_masked.nii.gz --mask-image /tmp/mriqc_wf/anatMRIQC/synthstrip_wf/55958dc169743fd6d666b6d641859b94524961c5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz --mrf [0.01,1x1x1] --output [segment.nii.gz,segment_%02d.nii.gz] --use-random-seed 1"}, "2184123": {"pcpu": 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/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/motion_correct/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.nii.gz"}, "2224330": {"pcpu": 101.0, "pmem": 0.0, "rss": 213729280, "vsz": 222310400, "timestamp": "2025-10-10T00:39:18.471211+02:00", "etime": "00:38", "stat": {"R": 36}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/motion_correct/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.nii.gz"}, "2184123": {"pcpu": 9.3, "pmem": 0.0, "rss": 1208168448, "vsz": 1926213632, "timestamp": "2025-10-10T00:39:18.471195+02:00", "etime": "26:44", "stat": {"S": 55, "R": 1}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:39:18.471118+02:00", "etime": "27:00", 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/tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/motion_correct/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.nii.gz"}, "2224330": {"pcpu": 96.4, "pmem": 0.0, "rss": 212942848, "vsz": 219602944, "timestamp": "2025-10-10T00:40:52.738250+02:00", "etime": "02:12", "stat": {"R": 32}, "cmd": "3dvolreg -Fourier -twopass -1Dfile sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.1D -1Dmatrix_save sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.aff12.1D -prefix sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_volreg.nii.gz -base /tmp/mriqc_wf/dwiMRIQC/0b99493ed2634281f17793dd6f27ff8a86e1c794/averages/mapflow/_averages0/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_mean.nii.gz -zpad 4 -maxdisp1D sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull_md.1D /tmp/mriqc_wf/dwiMRIQC/dMRI_HMC/0b99493ed2634281f17793dd6f27ff8a86e1c794/motion_correct/sub-cIIIs07_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-103_dwi_valid_nodriftfull.nii.gz"}, "2184123": {"pcpu": 8.8, "pmem": 0.0, "rss": 531972096, "vsz": 1250181120, "timestamp": "2025-10-10T00:41:19.080287+02:00", "etime": "28:45", "stat": {"S": 55, "R": 2}, "cmd": "/opt/conda/bin/python3.11 /opt/conda/bin/mriqc sourcedata/raw . participant --participant-label sub-cIIIs07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports"}, "2183679": {"pcpu": 0.0, "pmem": 0.0, "rss": 20242432, "vsz": 1276993536, "timestamp": "2025-10-10T00:41:19.080209+02:00", "etime": "29:00", 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