ds003416-mriqc/code/createjobs_mriqc.sh

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#!/bin/bash
#
# input 1 => jobfile with 1 command per line
# input 2 => number of jobs per nodes to process within 24h with SLURM
JOBFILE=code/ds003416_mriqc.jobs
nodejobs=2200
# splitting the ds003416_mriqc.jobs file according to node distribution
cat ${JOBFILE} | parallel -j1 --pipe -N${nodejobs} 'cat > code/jobs/job_{#}'