install(ok): /var/lib/condor/execute/dir_1898337/ds (dataset) install(ok): /var/lib/condor/execute/dir_1898337/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_1898337/ds/sourcedata/raw] ------------------------------------------------------------------ Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826 ---------------------------------------------------------------- NOTICE Copyright © The NiPreps Developers. This product includes software developed by the NiPreps Community (https://nipreps.org/). Portions of this software were developed at the Department of Psychology at Stanford University, Stanford, CA, US. This software contains code ultimately derived from the PCP Quality Assessment Protocol (QAP; http://preprocessed-connectomes-project.org/quality-assessment-protocol) by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman. This software is also distributed as a Docker container image. The bootstrapping file for the image ("Dockerfile") is licensed under the MIT License. ---------------------------------------------------------------- * BIDS dataset path: /var/lib/condor/execute/dir_1898337/ds/sourcedata/raw. * Output folder: .. * Analysis levels: ['participant']. ------------------------------------------------------------------ 2025-10-09 21:57:38 | IMPORTANT | mriqc | Extracting metadata and entities for 2 input runs of modality 't1w'... 2025-10-09 21:57:38 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.00 GB [maximum|average]. 2025-10-09 21:57:38 | IMPORTANT | mriqc | Extracting metadata and entities for 12 input runs of modality 'dwi'... 2025-10-09 21:57:38 | WARNING | nipype.workflow | 4 cannot be processed (too short or too long) 2025-10-09 21:57:38 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average]. 2025-10-09 21:57:38 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215737_76b5cc9d-73c0-47a8-86b7-71839ac8d77f.toml. 2025-10-09 21:57:42 | INFO | matplotlib.font_manager | generated new fontManager 2025-10-09 21:57:43 | IMPORTANT | mriqc | Building MRIQC's workflows... 2025-10-09 21:57:43 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 8 NIfTI files.. 2025-10-09 21:57:44 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 2 NIfTI files.. 2025-10-09 21:57:48 | IMPORTANT | mriqc | Workflow building finished (exit code 0). 2025-10-09 21:57:51 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring'] 2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/05c9e737d70a29e7defc422b224cf0bf64ea9192/conform". 2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:57:52 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.257374s. 2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/conform". 2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:57:54 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.638324s. 2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/load_bmat". 2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:57:56 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.146675s. 2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/sanitize". 2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:57:58 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.024196s. 2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5386b75365649bda85f881e04bc7b61882502cda/provenance". 2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.015715s. 2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/load_bmat". 2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:00 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020641s. 2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/sanitize". 2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:02 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018728s. 2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/40283487c2f5ac959710890b6005f326145780fa/provenance". 2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.015644s. 2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/load_bmat". 2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:04 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021526s. 2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/sanitize". 2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018659s. 2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/provenance". 2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020567s. 2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/load_bmat". 2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020913s. 2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/sanitize". 2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:10 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018722s. 2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/9b97ef91266292d7468e71cfacf20fb2d75aa14b/provenance". 2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020364s. 2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/load_bmat". 2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:12 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021267s. 2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/sanitize". 2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:14 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.64214s. 2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a2b603414e6a1cab759d57364fa175be272698a9/provenance". 2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.016519s. 2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/load_bmat". 2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:16 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02116s. 2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/sanitize". 2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:18 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.019121s. 2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d92a6477de874e046fd826e3d18f8489e8b0da0f/provenance". 2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.016734s. 2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/load_bmat". 2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:20 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.020609s. 2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/sanitize". 2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:22 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.845352s. 2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/87a43da320ed2a87abc61acd510d2bcd62c17739/provenance". 2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021098s. 2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/load_bmat". 2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:58:24 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.021391s. 2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/sanitize". 2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:58:26 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.018863s. 2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0eda6fdc2bc857558fe3d0acd9c93262baa21345/provenance". 2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021382s. 2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/pre_clip". 2025-10-09 21:58:28 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:58:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.127541s. 2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/05c9e737d70a29e7defc422b224cf0bf64ea9192/RotationMask". 2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:58:36 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.71919s. 2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/PlotMosaicNoise". 2025-10-09 21:58:38 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:58:42 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.177699s. 2025-10-09 21:58:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/pre_clip". 2025-10-09 21:58:44 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:58:52 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.396894s. 2025-10-09 21:58:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/RotationMask". 2025-10-09 21:58:54 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:58:54 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.812662s. 2025-10-09 21:58:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/PlotMosaicNoise". 2025-10-09 21:58:56 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:59:00 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.39071s. 2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/shells". 2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000652s. 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/piesno". 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.767052s. 2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/shells". 2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000622s. 2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/piesno". 2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.77297s. 2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/shells". 2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000649s. 2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/piesno". 2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:13 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.008274s. 2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/shells". 2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000619s. 2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/piesno". 2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:17 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.036525s. 2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/shells". 2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000594s. 2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/piesno". 2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.757188s. 2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/shells". 2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000605s. 2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/piesno". 2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.796163s. 2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/shells". 2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000635s. 2025-10-09 21:59:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/piesno". 2025-10-09 21:59:28 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:29 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.050663s. 2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/shells". 2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00065s. 2025-10-09 21:59:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/piesno". 2025-10-09 21:59:32 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:59:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.981762s. 2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/pre_n4". 2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:01:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 104.326415s. 2025-10-09 22:01:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/ds_report_background". 2025-10-09 22:01:20 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 22:01:20 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.006975s. 2025-10-09 22:01:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/pre_n4". 2025-10-09 22:01:20 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:03:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 104.484205s. 2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/ds_report_background". 2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.003973s. 2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/dwi_ref". 2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:06 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.402303s. 2025-10-09 22:03:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/get_lowb". 2025-10-09 22:03:08 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:08 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.256064s. 2025-10-09 22:03:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/dwi_ref". 2025-10-09 22:03:10 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:10 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.40403s. 2025-10-09 22:03:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/get_lowb". 2025-10-09 22:03:12 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:12 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.257688s. 2025-10-09 22:03:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/dwi_ref". 2025-10-09 22:03:14 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:14 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.512129s. 2025-10-09 22:03:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/get_lowb". 2025-10-09 22:03:16 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:16 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.331127s. 2025-10-09 22:03:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/dwi_ref". 2025-10-09 22:03:18 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:18 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.531638s. 2025-10-09 22:03:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/get_lowb". 2025-10-09 22:03:20 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:20 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.355379s. 2025-10-09 22:03:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/dwi_ref". 2025-10-09 22:03:22 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:22 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.435606s. 2025-10-09 22:03:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/get_lowb". 2025-10-09 22:03:24 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:24 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.261324s. 2025-10-09 22:03:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/dwi_ref". 2025-10-09 22:03:26 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:26 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.431642s. 2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/get_lowb". 2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.257764s. 2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/dwi_ref". 2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:30 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.531267s. 2025-10-09 22:03:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/get_lowb". 2025-10-09 22:03:32 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:32 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.330507s. 2025-10-09 22:03:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/dwi_ref". 2025-10-09 22:03:34 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:03:34 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.511553s. 2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/get_lowb". 2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:03:36 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.332656s. 2025-10-09 22:03:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/synthstrip". 2025-10-09 22:03:38 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:04:47 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 69.599313s. 2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/synthstrip". 2025-10-09 22:04:48 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 67.94731s. 2025-10-09 22:05:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/pre_clip". 2025-10-09 22:05:58 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:05:58 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.461813s. 2025-10-09 22:06:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/SharpenEPI". 2025-10-09 22:06:00 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:06:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.944592s. 2025-10-09 22:06:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/hmc_b0". 2025-10-09 22:06:08 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:06:24 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 16.139366s. 2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/pre_clip". 2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:06:26 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.464008s. 2025-10-09 22:06:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/SharpenEPI". 2025-10-09 22:06:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:06:34 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.940119s. 2025-10-09 22:06:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/hmc_b0". 2025-10-09 22:06:36 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:06:52 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 16.41813s. 2025-10-09 22:06:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/pre_clip". 2025-10-09 22:06:54 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:06:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.494705s. 2025-10-09 22:06:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/SharpenEPI". 2025-10-09 22:06:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:07:02 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.960981s. 2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/hmc_b0". 2025-10-09 22:07:04 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:07:25 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.767798s. 2025-10-09 22:07:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/pre_clip". 2025-10-09 22:07:26 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:07:26 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.486077s. 2025-10-09 22:07:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/SharpenEPI". 2025-10-09 22:07:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:07:34 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.961263s. 2025-10-09 22:07:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/hmc_b0". 2025-10-09 22:07:36 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:07:57 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.806686s. 2025-10-09 22:07:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/pre_clip". 2025-10-09 22:07:58 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:07:58 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.499878s. 2025-10-09 22:08:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/SharpenEPI". 2025-10-09 22:08:00 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:08:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.9492840000000005s. 2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/hmc_b0". 2025-10-09 22:08:08 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:08:24 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 16.205213s. 2025-10-09 22:08:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/pre_clip". 2025-10-09 22:08:26 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:08:26 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.476571s. 2025-10-09 22:08:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/SharpenEPI". 2025-10-09 22:08:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:08:34 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.9425740000000005s. 2025-10-09 22:08:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/hmc_b0". 2025-10-09 22:08:36 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:08:52 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 16.394267s. 2025-10-09 22:08:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/pre_clip". 2025-10-09 22:08:54 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:08:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.516809s. 2025-10-09 22:08:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/SharpenEPI". 2025-10-09 22:08:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.96781s. 2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/hmc_b0". 2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:09:25 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.842546s. 2025-10-09 22:09:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/pre_clip". 2025-10-09 22:09:26 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:09:26 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.498289s. 2025-10-09 22:09:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/SharpenEPI". 2025-10-09 22:09:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:09:34 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 5.96694s. 2025-10-09 22:09:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/hmc_b0". 2025-10-09 22:09:36 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 21.03516s. 2025-10-09 22:09:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/post_n4". 2025-10-09 22:09:58 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:10:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 18.550103s. 2025-10-09 22:10:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/05c9e737d70a29e7defc422b224cf0bf64ea9192/smoothness". 2025-10-09 22:10:18 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:10:21 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.195489s. 2025-10-09 22:10:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/PlotMosaicZoomed". 2025-10-09 22:10:22 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:10:26 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.713796s. 2025-10-09 22:10:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/PlotBrainmask". 2025-10-09 22:10:26 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:10:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.044617s. 2025-10-09 22:10:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/post_n4". 2025-10-09 22:10:30 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:10:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 18.464448s. 2025-10-09 22:10:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/smoothness". 2025-10-09 22:10:50 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:10:53 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.261073s. 2025-10-09 22:10:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/PlotMosaicZoomed". 2025-10-09 22:10:54 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.803795s. 2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/PlotBrainmask". 2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:11:01 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.076818s. 2025-10-09 22:11:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/pre_n4". 2025-10-09 22:11:02 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:08 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.966557s. 2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/pre_n4". 2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:16 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.959788s. 2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/pre_n4". 2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:24 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.932443s. 2025-10-09 22:11:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/pre_n4". 2025-10-09 22:11:26 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:32 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.9577860000000005s. 2025-10-09 22:11:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/pre_n4". 2025-10-09 22:11:34 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.975246s. 2025-10-09 22:11:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/pre_n4". 2025-10-09 22:11:42 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:48 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.942713s. 2025-10-09 22:11:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/pre_n4". 2025-10-09 22:11:50 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:11:56 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.969408s. 2025-10-09 22:11:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/pre_n4". 2025-10-09 22:11:58 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:12:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 5.963392s. 2025-10-09 22:12:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/final_masked". 2025-10-09 22:12:06 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:12:06 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.228131s. 2025-10-09 22:12:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization". 2025-10-09 22:12:08 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:12:08 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:13:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/stderr.nipype-init). 2025-10-09 22:13:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:13:13 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:13:27 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:13:29 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:13:29 | INFO | niworkflows | Generating visual report 2025-10-09 22:13:43 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 95.179163s. 2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/ds_report_zoomed". 2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.00402s. 2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/ds_report_bmask". 2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004632s. 2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/final_masked". 2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:13:44 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.244151s. 2025-10-09 22:13:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization". 2025-10-09 22:13:46 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:13:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:14:50 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/stderr.nipype-init). 2025-10-09 22:14:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:14:50 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:15:03 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:15:05 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:15:05 | INFO | niworkflows | Generating visual report 2025-10-09 22:15:19 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 93.025277s. 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/ds_report_zoomed". 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004127s. 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/ds_report_bmask". 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003891s. 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/synthstrip". 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:16:07 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.506028s. 2025-10-09 22:16:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/synthstrip". 2025-10-09 22:16:08 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:16:55 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.539207s. 2025-10-09 22:16:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/synthstrip". 2025-10-09 22:16:56 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.424382s. 2025-10-09 22:17:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/synthstrip". 2025-10-09 22:17:44 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:18:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.459481s. 2025-10-09 22:18:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/synthstrip". 2025-10-09 22:18:32 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:19:19 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.583759s. 2025-10-09 22:19:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/synthstrip". 2025-10-09 22:19:20 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:19:58 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.911769s. 2025-10-09 22:20:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/synthstrip". 2025-10-09 22:20:00 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:20:47 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.508182s. 2025-10-09 22:20:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/synthstrip". 2025-10-09 22:20:48 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.871605s. 2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/ds_report_norm". 2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004016s. 2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/7b6963c5c8bd913bbbfa1b979f00d55666afcf10/ds_report_norm". 2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004086s. 2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/post_n4". 2025-10-09 22:21:26 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:21:28 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.6989049999999999s. 2025-10-09 22:21:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/sp_mask". 2025-10-09 22:21:30 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:21:31 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.453415s. 2025-10-09 22:21:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/drift". 2025-10-09 22:21:32 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:21:32 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0048, 0.9985, 1.0026, 1.0086, 1.0082, 1.0053. 2025-10-09 22:21:33 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.204058s. 2025-10-09 22:21:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/EPI2MNI". 2025-10-09 22:21:34 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:21:34 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:22:01 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:22:01 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-116_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-116_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-116_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:22:56 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:22:56 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:22:56 | INFO | niworkflows | Generating visual report 2025-10-09 22:23:11 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 96.451486s. 2025-10-09 22:23:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/post_n4". 2025-10-09 22:23:12 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:23:14 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.713714s. 2025-10-09 22:23:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/sp_mask". 2025-10-09 22:23:14 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:23:15 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.474363s. 2025-10-09 22:23:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/drift". 2025-10-09 22:23:16 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:23:16 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0042, 1.0033, 1.0063, 1.0053, 0.9989, 1.0053. 2025-10-09 22:23:17 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.199348s. 2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/EPI2MNI". 2025-10-09 22:23:18 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:23:18 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:23:44 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:23:44 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-219_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-219_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-219_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:24:42 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:24:42 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:24:42 | INFO | niworkflows | Generating visual report 2025-10-09 22:24:57 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 98.393212s. 2025-10-09 22:24:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/post_n4". 2025-10-09 22:24:58 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.7126109999999999s. 2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/sp_mask". 2025-10-09 22:25:00 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:25:01 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.605338s. 2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/drift". 2025-10-09 22:25:02 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:25:02 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0001, 1.0015, 1.0088, 1.0056, 1.009, 1.0052, 0.9892, 0.9998. 2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.548303s. 2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/EPI2MNI". 2025-10-09 22:25:04 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:25:04 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:25:30 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:25:30 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-114_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:26:25 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:26:25 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:26:25 | INFO | niworkflows | Generating visual report 2025-10-09 22:26:40 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 95.333091s. 2025-10-09 22:26:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/post_n4". 2025-10-09 22:26:40 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:26:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.700385s. 2025-10-09 22:26:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/sp_mask". 2025-10-09 22:26:42 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:26:43 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.621145s. 2025-10-09 22:26:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/drift". 2025-10-09 22:26:44 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:26:44 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0017, 0.9973, 1.0017, 1.0031, 1.0117, 1.0123, 1.0137, 0.9983. 2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.569755s. 2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/EPI2MNI". 2025-10-09 22:26:46 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:26:46 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:27:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/EPI2MNI/stderr.nipype-init). 2025-10-09 22:27:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:27:13 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/SharpenEPI/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-217_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:28:13 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:28:13 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:28:13 | INFO | niworkflows | Generating visual report 2025-10-09 22:28:28 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 101.255755s. 2025-10-09 22:28:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/post_n4". 2025-10-09 22:28:28 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:28:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.779547s. 2025-10-09 22:28:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/sp_mask". 2025-10-09 22:28:30 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:28:31 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.481218s. 2025-10-09 22:28:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/drift". 2025-10-09 22:28:32 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:28:32 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.991, 0.993, 0.9966, 0.9977, 0.991, 0.9908. 2025-10-09 22:28:34 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.230178s. 2025-10-09 22:28:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/EPI2MNI". 2025-10-09 22:28:34 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:28:34 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:28:57 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/EPI2MNI/stderr.nipype-init). 2025-10-09 22:28:57 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:28:57 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:29:54 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:29:54 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:29:54 | INFO | niworkflows | Generating visual report 2025-10-09 22:30:09 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.196523s. 2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/post_n4". 2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.724191s. 2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/sp_mask". 2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:30:13 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.459984s. 2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/drift". 2025-10-09 22:30:14 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:30:15 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9972, 0.9875, 0.9949, 0.9983, 0.997, 0.9966. 2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.234896s. 2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/EPI2MNI". 2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:30:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:30:41 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/EPI2MNI/stderr.nipype-init). 2025-10-09 22:30:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:30:41 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:31:35 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:31:35 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:31:35 | INFO | niworkflows | Generating visual report 2025-10-09 22:31:50 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.451244s. 2025-10-09 22:31:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/post_n4". 2025-10-09 22:31:50 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.763171s. 2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/sp_mask". 2025-10-09 22:31:52 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:31:53 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.630055s. 2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/drift". 2025-10-09 22:31:54 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:31:55 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9989, 0.9961, 0.9941, 0.9926, 0.9911, 0.9878, 0.9886, 0.9921. 2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.576532s. 2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/EPI2MNI". 2025-10-09 22:31:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:31:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:32:21 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/EPI2MNI/stderr.nipype-init). 2025-10-09 22:32:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:32:21 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:33:18 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:33:18 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:33:18 | INFO | niworkflows | Generating visual report 2025-10-09 22:33:33 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 96.354229s. 2025-10-09 22:33:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/post_n4". 2025-10-09 22:33:34 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:33:36 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 1.751198s. 2025-10-09 22:33:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/sp_mask". 2025-10-09 22:33:36 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:33:37 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.630148s. 2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/drift". 2025-10-09 22:33:38 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:33:39 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9993, 0.9929, 1.0, 0.9947, 0.9819, 0.9913, 0.9919, 0.9936. 2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.5728849999999999s. 2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/EPI2MNI". 2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:33:40 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:34:03 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:34:03 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-218_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-218_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/SharpenEPI/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-218_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:35:00 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:35:00 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:35:00 | INFO | niworkflows | Generating visual report 2025-10-09 22:35:14 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.683986s. 2025-10-09 22:35:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5386b75365649bda85f881e04bc7b61882502cda/final_masked". 2025-10-09 22:35:15 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:35:15 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027358s. 2025-10-09 22:35:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/dwidenoise". 2025-10-09 22:35:17 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:35:30 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 13.121095s. 2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5386b75365649bda85f881e04bc7b61882502cda/ResampleSegmentation". 2025-10-09 22:35:31 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:35:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.5569319999999998s. 2025-10-09 22:35:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/40283487c2f5ac959710890b6005f326145780fa/final_masked". 2025-10-09 22:35:35 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:35:35 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027306s. 2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/dwidenoise". 2025-10-09 22:35:37 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:35:50 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 13.205879s. 2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/40283487c2f5ac959710890b6005f326145780fa/ResampleSegmentation". 2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.3778449999999998s. 2025-10-09 22:35:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/final_masked". 2025-10-09 22:35:55 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:35:55 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027457s. 2025-10-09 22:35:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/dwidenoise". 2025-10-09 22:35:57 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:36:21 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.178168s. 2025-10-09 22:36:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/ResampleSegmentation". 2025-10-09 22:36:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:36:25 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.533801s. 2025-10-09 22:36:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/final_masked". 2025-10-09 22:36:27 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:36:27 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027121s. 2025-10-09 22:36:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/dwidenoise". 2025-10-09 22:36:29 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 23.386758s. 2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/9b97ef91266292d7468e71cfacf20fb2d75aa14b/ResampleSegmentation". 2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.385778s. 2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a2b603414e6a1cab759d57364fa175be272698a9/final_masked". 2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02844s. 2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/dwidenoise". 2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:37:13 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 14.078736s. 2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a2b603414e6a1cab759d57364fa175be272698a9/ResampleSegmentation". 2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.559923s. 2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/final_masked". 2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027801s. 2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/dwidenoise". 2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 13.797505s. 2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d92a6477de874e046fd826e3d18f8489e8b0da0f/ResampleSegmentation". 2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.506667s. 2025-10-09 22:37:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/final_masked". 2025-10-09 22:37:39 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:37:39 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028064s. 2025-10-09 22:37:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/dwidenoise". 2025-10-09 22:37:41 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:38:06 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 25.09211s. 2025-10-09 22:38:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/87a43da320ed2a87abc61acd510d2bcd62c17739/ResampleSegmentation". 2025-10-09 22:38:07 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:38:09 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.683605s. 2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/final_masked". 2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:38:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027602s. 2025-10-09 22:38:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/dwidenoise". 2025-10-09 22:38:13 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 24.725524s. 2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0eda6fdc2bc857558fe3d0acd9c93262baa21345/ResampleSegmentation". 2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 2.530297s. 2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/dwimodel". 2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.5484809999999998s. 2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5386b75365649bda85f881e04bc7b61882502cda/estimate_sigma". 2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.030805s. 2025-10-09 22:38:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/get_wm". 2025-10-09 22:38:49 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:38:49 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.031347s. 2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/dwimodel". 2025-10-09 22:38:51 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:38:53 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.5311909999999997s. 2025-10-09 22:38:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/40283487c2f5ac959710890b6005f326145780fa/estimate_sigma". 2025-10-09 22:38:55 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:38:55 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.031343s. 2025-10-09 22:38:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/get_wm". 2025-10-09 22:38:57 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:38:57 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.031049s. 2025-10-09 22:38:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/dwimodel". 2025-10-09 22:38:59 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:39:01 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.870615s. 2025-10-09 22:39:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/estimate_sigma". 2025-10-09 22:39:03 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:39:03 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.030826s. 2025-10-09 22:39:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/get_wm". 2025-10-09 22:39:05 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:39:05 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.030669s. 2025-10-09 22:39:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/dwimodel". 2025-10-09 22:39:07 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:39:09 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.761203s. 2025-10-09 22:39:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/9b97ef91266292d7468e71cfacf20fb2d75aa14b/estimate_sigma". 2025-10-09 22:39:11 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:39:11 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.031072s. 2025-10-09 22:39:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/get_wm". 2025-10-09 22:39:13 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:39:13 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.031092s. 2025-10-09 22:39:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/dwimodel". 2025-10-09 22:39:15 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:39:17 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.669706s. 2025-10-09 22:39:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a2b603414e6a1cab759d57364fa175be272698a9/estimate_sigma". 2025-10-09 22:39:19 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:39:19 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.031319s. 2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/get_wm". 2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.030439s. 2025-10-09 22:39:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/dwimodel". 2025-10-09 22:39:23 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:39:25 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.637982s. 2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d92a6477de874e046fd826e3d18f8489e8b0da0f/estimate_sigma". 2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.031244s. 2025-10-09 22:39:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/get_wm". 2025-10-09 22:39:29 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:39:29 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.030667s. 2025-10-09 22:39:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/dwimodel". 2025-10-09 22:39:31 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:39:34 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.952174s. 2025-10-09 22:39:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/87a43da320ed2a87abc61acd510d2bcd62c17739/estimate_sigma". 2025-10-09 22:39:35 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:39:35 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.030939s. 2025-10-09 22:39:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/get_wm". 2025-10-09 22:39:37 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:39:37 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.030386s. 2025-10-09 22:39:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/dwimodel". 2025-10-09 22:39:39 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:39:42 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 2.928629s. 2025-10-09 22:39:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0eda6fdc2bc857558fe3d0acd9c93262baa21345/estimate_sigma". 2025-10-09 22:39:43 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:39:43 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.031199s. 2025-10-09 22:39:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/get_wm". 2025-10-09 22:39:45 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:39:45 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.030739s. 2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/5386b75365649bda85f881e04bc7b61882502cda/cc_mask". 2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:39:47 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.451908s. 2025-10-09 22:39:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/mosaic_fa". 2025-10-09 22:39:49 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:39:50 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.129071s. 2025-10-09 22:39:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/mosaic_md". 2025-10-09 22:39:51 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:39:52 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.381337s. 2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/plot_heatmap". 2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:39:54 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.974188s. 2025-10-09 22:39:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/40283487c2f5ac959710890b6005f326145780fa/cc_mask". 2025-10-09 22:39:55 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:39:55 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.416316s. 2025-10-09 22:39:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/mosaic_fa". 2025-10-09 22:39:57 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:39:58 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.245656s. 2025-10-09 22:39:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/mosaic_md". 2025-10-09 22:39:59 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:00 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.212312s. 2025-10-09 22:40:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/plot_heatmap". 2025-10-09 22:40:01 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:02 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.162062s. 2025-10-09 22:40:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/cc_mask". 2025-10-09 22:40:03 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:40:03 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.416393s. 2025-10-09 22:40:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/mosaic_fa". 2025-10-09 22:40:05 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:40:06 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.142378s. 2025-10-09 22:40:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/mosaic_md". 2025-10-09 22:40:07 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:08 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.408626s. 2025-10-09 22:40:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/plot_heatmap". 2025-10-09 22:40:09 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:10 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.985053s. 2025-10-09 22:40:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/9b97ef91266292d7468e71cfacf20fb2d75aa14b/cc_mask". 2025-10-09 22:40:11 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:40:11 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.443481s. 2025-10-09 22:40:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/mosaic_fa". 2025-10-09 22:40:13 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:40:14 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.247465s. 2025-10-09 22:40:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/mosaic_md". 2025-10-09 22:40:15 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:16 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.2113260000000001s. 2025-10-09 22:40:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/plot_heatmap". 2025-10-09 22:40:17 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:18 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.211272s. 2025-10-09 22:40:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/a2b603414e6a1cab759d57364fa175be272698a9/cc_mask". 2025-10-09 22:40:19 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:40:19 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.416175s. 2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/mosaic_fa". 2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:40:22 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.142467s. 2025-10-09 22:40:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/mosaic_md". 2025-10-09 22:40:23 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.216367s. 2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/plot_heatmap". 2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.166556s. 2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/d92a6477de874e046fd826e3d18f8489e8b0da0f/cc_mask". 2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.421797s. 2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/mosaic_fa". 2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.141252s. 2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/mosaic_md". 2025-10-09 22:40:31 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:32 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.39489s. 2025-10-09 22:40:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/plot_heatmap". 2025-10-09 22:40:33 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:34 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.941914s. 2025-10-09 22:40:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/87a43da320ed2a87abc61acd510d2bcd62c17739/cc_mask". 2025-10-09 22:40:35 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:40:35 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.441714s. 2025-10-09 22:40:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/mosaic_fa". 2025-10-09 22:40:37 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:40:38 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.265501s. 2025-10-09 22:40:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/mosaic_md". 2025-10-09 22:40:39 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:40 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.415768s. 2025-10-09 22:40:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/plot_heatmap". 2025-10-09 22:40:41 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:42 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 0.996756s. 2025-10-09 22:40:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/0eda6fdc2bc857558fe3d0acd9c93262baa21345/cc_mask". 2025-10-09 22:40:43 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:40:43 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.418061s. 2025-10-09 22:40:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/mosaic_fa". 2025-10-09 22:40:45 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:40:46 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.255616s. 2025-10-09 22:40:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/mosaic_md". 2025-10-09 22:40:47 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:40:48 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.218361s. 2025-10-09 22:40:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/plot_heatmap". 2025-10-09 22:40:49 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:40:50 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.217363s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/ds_report_fa". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004278s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/ds_report_md". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004183s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5386b75365649bda85f881e04bc7b61882502cda/ds_report_hm". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004213s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/ds_report_fa". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004094s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/ds_report_md". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004194s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/40283487c2f5ac959710890b6005f326145780fa/ds_report_hm". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004229s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/ds_report_fa". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004177s. 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/ds_report_md". 2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:51 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.0042s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a33d75d5a7b2b7d5a9054d721dc2ab4b084f02b7/ds_report_hm". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004032s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/ds_report_fa". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004197s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/ds_report_md". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004046s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/9b97ef91266292d7468e71cfacf20fb2d75aa14b/ds_report_hm". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004052s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/ds_report_fa". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004195s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/ds_report_md". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004063s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a2b603414e6a1cab759d57364fa175be272698a9/ds_report_hm". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004032s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/ds_report_fa". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004158s. 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/ds_report_md". 2025-10-09 22:40:52 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004218s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d92a6477de874e046fd826e3d18f8489e8b0da0f/ds_report_hm". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004041s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/ds_report_fa". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004043s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/ds_report_md". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004212s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/87a43da320ed2a87abc61acd510d2bcd62c17739/ds_report_hm". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004194s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/ds_report_fa". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004053s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/ds_report_md". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004212s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0eda6fdc2bc857558fe3d0acd9c93262baa21345/ds_report_hm". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004056s. 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0"  2025-10-09 22:40:59 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 6.078371s. 2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1"  2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 6.120486s. 2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2"  2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 6.09055s. 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached. 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached. 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/05c9e737d70a29e7defc422b224cf0bf64ea9192/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs 2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached. 2025-10-09 22:41:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/05c9e737d70a29e7defc422b224cf0bf64ea9192/Enhance". 2025-10-09 22:41:20 | INFO | nipype.workflow | [Node] Executing "Enhance"  2025-10-09 22:41:20 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.469629s. 2025-10-09 22:41:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/05c9e737d70a29e7defc422b224cf0bf64ea9192/format_tpm_names". 2025-10-09 22:41:22 | INFO | nipype.workflow | [Node] Executing "format_tpm_names"  2025-10-09 22:41:23 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.336395s. 2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/05c9e737d70a29e7defc422b224cf0bf64ea9192/Grad". 2025-10-09 22:41:24 | INFO | nipype.workflow | [Node] Executing "Grad"  2025-10-09 22:41:30 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 5.9564070000000005s. 2025-10-09 22:41:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/05c9e737d70a29e7defc422b224cf0bf64ea9192/apply_mask". 2025-10-09 22:41:32 | INFO | nipype.workflow | [Node] Executing "apply_mask"  2025-10-09 22:41:32 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.229788s. 2025-10-09 22:41:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/05c9e737d70a29e7defc422b224cf0bf64ea9192/GradientThreshold". 2025-10-09 22:41:34 | INFO | nipype.workflow | [Node] Executing "GradientThreshold"  2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 11.338029s. 2025-10-09 22:41:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/05c9e737d70a29e7defc422b224cf0bf64ea9192/segmentation". 2025-10-09 22:41:46 | INFO | nipype.workflow | [Node] Executing "segmentation"  2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 63.879921s. 2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/05c9e737d70a29e7defc422b224cf0bf64ea9192/ArtifactMask". 2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Executing "ArtifactMask"  2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 5.48105s. 2025-10-09 22:42:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/PlotHeadmask". 2025-10-09 22:42:56 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask"  2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.662385s. 2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/05c9e737d70a29e7defc422b224cf0bf64ea9192/harmonize". 2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Executing "harmonize"  2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.84706s. 2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/05c9e737d70a29e7defc422b224cf0bf64ea9192/PlotSegmentation". 2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation"  2025-10-09 22:43:05 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.992906s. 2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/05c9e737d70a29e7defc422b224cf0bf64ea9192/provenance". 2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.047357s. 2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/05c9e737d70a29e7defc422b224cf0bf64ea9192/ComputeQI2". 2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Executing "ComputeQI2"  2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 0.240062s. 2025-10-09 22:43:06 | WARNING | nipype.workflow | Storing result file without outputs 2025-10-09 22:43:06 | WARNING | nipype.workflow | [Node] Error on "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" (/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/05c9e737d70a29e7defc422b224cf0bf64ea9192/ComputeQI2) 2025-10-09 22:43:06 | ERROR | nipype.workflow | Node ComputeQI2.a0 (taskid=239) crashed: /var/lib/condor/execute/dir_1898337/ds/logs/crash-20251009-224306-fhoffstaedter-ComputeQI2.a0-de328d42-29c8-4ffb-9f47-e7ce28cd52e2.txt get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/anat/sub-cIVs040_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/dwi/sub-cIVs040_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-115_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/dwi/sub-cIVs040_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-218_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/dwi/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-116_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/dwi/sub-cIVs040_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-219_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/dwi/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx1/dwi/sub-cIVs040_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/anat/sub-cIVs040_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/dwi/sub-cIVs040_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/dwi/sub-cIVs040_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-219_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/dwi/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/dwi/sub-cIVs040_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-220_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/dwi/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040/ses-s1Bx2/dwi/sub-cIVs040_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-218_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs040 (directory) get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...] run(error): /var/lib/condor/execute/dir_1898337/ds (dataset) [./code/containers/scripts/singularity_cm...] action summary: get (notneeded: 4, ok: 16) run (error: 1)