install(ok): /var/lib/condor/execute/dir_3951239/ds (dataset) install(ok): /var/lib/condor/execute/dir_3951239/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3951239/ds/sourcedata/raw] ------------------------------------------------------------------ Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826 ---------------------------------------------------------------- NOTICE Copyright © The NiPreps Developers. This product includes software developed by the NiPreps Community (https://nipreps.org/). Portions of this software were developed at the Department of Psychology at Stanford University, Stanford, CA, US. This software contains code ultimately derived from the PCP Quality Assessment Protocol (QAP; http://preprocessed-connectomes-project.org/quality-assessment-protocol) by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman. This software is also distributed as a Docker container image. The bootstrapping file for the image ("Dockerfile") is licensed under the MIT License. ---------------------------------------------------------------- * BIDS dataset path: /var/lib/condor/execute/dir_3951239/ds/sourcedata/raw. * Output folder: .. * Analysis levels: ['participant']. ------------------------------------------------------------------ 2025-10-09 21:54:05 | IMPORTANT | mriqc | Extracting metadata and entities for 2 input runs of modality 't1w'... 2025-10-09 21:54:05 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.00 GB [maximum|average]. 2025-10-09 21:54:05 | IMPORTANT | mriqc | Extracting metadata and entities for 12 input runs of modality 'dwi'... 2025-10-09 21:54:05 | WARNING | nipype.workflow | 4 cannot be processed (too short or too long) 2025-10-09 21:54:05 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average]. 2025-10-09 21:54:05 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215403_ce69302f-45cd-456e-bc61-c81db8a0b72a.toml. 2025-10-09 21:54:10 | INFO | matplotlib.font_manager | generated new fontManager 2025-10-09 21:54:11 | IMPORTANT | mriqc | Building MRIQC's workflows... 2025-10-09 21:54:11 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 8 NIfTI files.. 2025-10-09 21:54:12 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 2 NIfTI files.. 2025-10-09 21:54:16 | IMPORTANT | mriqc | Workflow building finished (exit code 0). 2025-10-09 21:54:20 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring'] 2025-10-09 21:54:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/da238a71468e5da856c91a5f1994fca4d7f4141a/conform". 2025-10-09 21:54:20 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:54:21 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.245054s. 2025-10-09 21:54:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/201569bd1b204b9060c6d20017c8e693a9845147/conform". 2025-10-09 21:54:22 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:54:23 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.646467s. 2025-10-09 21:54:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/sanitize". 2025-10-09 21:54:24 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:25 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.718737s. 2025-10-09 21:54:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/provenance". 2025-10-09 21:54:26 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:26 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.016551s. 2025-10-09 21:54:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/load_bmat". 2025-10-09 21:54:26 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:27 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.174809s. 2025-10-09 21:54:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/sanitize". 2025-10-09 21:54:28 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:29 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.78914s. 2025-10-09 21:54:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8fda5306677586eff5748a755790e5f52cefcb68/provenance". 2025-10-09 21:54:30 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:30 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.016418s. 2025-10-09 21:54:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/load_bmat". 2025-10-09 21:54:30 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:30 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023075s. 2025-10-09 21:54:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/sanitize". 2025-10-09 21:54:32 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:33 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.936994s. 2025-10-09 21:54:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/provenance". 2025-10-09 21:54:34 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:34 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021219s. 2025-10-09 21:54:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/load_bmat". 2025-10-09 21:54:34 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:34 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024456s. 2025-10-09 21:54:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/sanitize". 2025-10-09 21:54:36 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:37 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.936561s. 2025-10-09 21:54:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2849da61b7af1091f6f0edc71ac073d594885588/provenance". 2025-10-09 21:54:38 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021113s. 2025-10-09 21:54:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/load_bmat". 2025-10-09 21:54:38 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:39 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023653s. 2025-10-09 21:54:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/sanitize". 2025-10-09 21:54:40 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:40 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.021653s. 2025-10-09 21:54:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/bf189a5a498c67810dd235dcc488076c198d1fa8/provenance". 2025-10-09 21:54:42 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:42 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.018189s. 2025-10-09 21:54:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/load_bmat". 2025-10-09 21:54:42 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:43 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024047s. 2025-10-09 21:54:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/sanitize". 2025-10-09 21:54:44 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:44 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.021657s. 2025-10-09 21:54:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/26626567734536bcc8eaf26d14460f818f6205d0/provenance". 2025-10-09 21:54:46 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:46 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.018133s. 2025-10-09 21:54:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/load_bmat". 2025-10-09 21:54:46 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:46 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.032383s. 2025-10-09 21:54:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/sanitize". 2025-10-09 21:54:48 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:48 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.021886s. 2025-10-09 21:54:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/f6bae3741b2d0e82d80bfa72c2495515531c942f/provenance". 2025-10-09 21:54:50 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:50 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.023412s. 2025-10-09 21:54:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/load_bmat". 2025-10-09 21:54:50 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:50 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023229s. 2025-10-09 21:54:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/sanitize". 2025-10-09 21:54:52 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:54:52 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.021328s. 2025-10-09 21:54:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d3683441fb14f94ffedf06132aca58cf4e1c9099/provenance". 2025-10-09 21:54:54 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:54:54 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.023511s. 2025-10-09 21:54:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/load_bmat". 2025-10-09 21:54:54 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:54:54 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024612s. 2025-10-09 21:54:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/pre_clip". 2025-10-09 21:54:56 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:55:05 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.399247s. 2025-10-09 21:55:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/da238a71468e5da856c91a5f1994fca4d7f4141a/RotationMask". 2025-10-09 21:55:06 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:55:07 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.654553s. 2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/PlotMosaicNoise". 2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:55:13 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.6836780000000005s. 2025-10-09 21:55:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/201569bd1b204b9060c6d20017c8e693a9845147/pre_clip". 2025-10-09 21:55:14 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.433639s. 2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/201569bd1b204b9060c6d20017c8e693a9845147/RotationMask". 2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:55:25 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.706084s. 2025-10-09 21:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/PlotMosaicNoise". 2025-10-09 21:55:26 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:55:31 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.977536s. 2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/piesno". 2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.854261s. 2025-10-09 21:55:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/shells". 2025-10-09 21:55:34 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:34 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000748s. 2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/piesno". 2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.844069s. 2025-10-09 21:55:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/shells". 2025-10-09 21:55:38 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:38 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000655s. 2025-10-09 21:55:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/piesno". 2025-10-09 21:55:40 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:41 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.104636s. 2025-10-09 21:55:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/shells". 2025-10-09 21:55:42 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:42 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000791s. 2025-10-09 21:55:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/piesno". 2025-10-09 21:55:44 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:45 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.12163s. 2025-10-09 21:55:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/shells". 2025-10-09 21:55:46 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:46 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000724s. 2025-10-09 21:55:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/piesno". 2025-10-09 21:55:48 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:49 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.871475s. 2025-10-09 21:55:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/shells". 2025-10-09 21:55:50 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:50 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00063s. 2025-10-09 21:55:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/piesno". 2025-10-09 21:55:52 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:53 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.870912s. 2025-10-09 21:55:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/shells". 2025-10-09 21:55:54 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:54 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000634s. 2025-10-09 21:55:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/piesno". 2025-10-09 21:55:56 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.2443170000000001s. 2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/shells". 2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00169s. 2025-10-09 21:56:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/piesno". 2025-10-09 21:56:00 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.213008s. 2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/shells". 2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:02 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000724s. 2025-10-09 21:56:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/pre_n4". 2025-10-09 21:56:04 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 21:58:06 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 121.556584s. 2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/ds_report_background". 2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 21:58:08 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008288s. 2025-10-09 21:58:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/201569bd1b204b9060c6d20017c8e693a9845147/pre_n4". 2025-10-09 21:58:09 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:00:11 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 122.914543s. 2025-10-09 22:00:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/ds_report_background". 2025-10-09 22:00:12 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 22:00:12 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.004691s. 2025-10-09 22:00:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/dwi_ref". 2025-10-09 22:00:13 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:13 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.457067s. 2025-10-09 22:00:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/get_lowb". 2025-10-09 22:00:14 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:15 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.28181s. 2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/dwi_ref". 2025-10-09 22:00:16 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:17 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.473756s. 2025-10-09 22:00:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/get_lowb". 2025-10-09 22:00:18 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:19 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.333017s. 2025-10-09 22:00:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/dwi_ref". 2025-10-09 22:00:20 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:21 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.586387s. 2025-10-09 22:00:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/get_lowb". 2025-10-09 22:00:22 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:23 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.382059s. 2025-10-09 22:00:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/dwi_ref". 2025-10-09 22:00:24 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:25 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.582201s. 2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/get_lowb". 2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:27 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.371204s. 2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/dwi_ref". 2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:29 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.497979s. 2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/get_lowb". 2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:31 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.297321s. 2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/dwi_ref". 2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:33 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.475601s. 2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/get_lowb". 2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:35 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.294198s. 2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/dwi_ref". 2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:37 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.597654s. 2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/get_lowb". 2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:39 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.380731s. 2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/dwi_ref". 2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:00:41 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.588447s. 2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/get_lowb". 2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:00:43 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.382217s. 2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/synthstrip". 2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:02:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 81.721827s. 2025-10-09 22:02:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/201569bd1b204b9060c6d20017c8e693a9845147/synthstrip". 2025-10-09 22:02:07 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:03:28 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 81.136534s. 2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/pre_clip". 2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:03:29 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.536844s. 2025-10-09 22:03:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/SharpenEPI". 2025-10-09 22:03:31 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:03:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.091083s. 2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/hmc_b0". 2025-10-09 22:03:39 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:03:59 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.020596s. 2025-10-09 22:04:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/pre_clip". 2025-10-09 22:04:01 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:04:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.561923s. 2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/SharpenEPI". 2025-10-09 22:04:03 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:04:10 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.081119s. 2025-10-09 22:04:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/hmc_b0". 2025-10-09 22:04:11 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:04:31 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.092338s. 2025-10-09 22:04:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/pre_clip". 2025-10-09 22:04:33 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:04:33 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.55842s. 2025-10-09 22:04:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/SharpenEPI". 2025-10-09 22:04:35 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:04:42 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.179644s. 2025-10-09 22:04:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/hmc_b0". 2025-10-09 22:04:43 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:05:09 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 26.049449s. 2025-10-09 22:05:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/pre_clip". 2025-10-09 22:05:11 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:05:11 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.597006s. 2025-10-09 22:05:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/SharpenEPI". 2025-10-09 22:05:13 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.272411s. 2025-10-09 22:05:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/hmc_b0". 2025-10-09 22:05:21 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:05:46 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 25.61859s. 2025-10-09 22:05:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/pre_clip". 2025-10-09 22:05:47 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:05:47 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.576846s. 2025-10-09 22:05:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/SharpenEPI". 2025-10-09 22:05:49 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.051097s. 2025-10-09 22:05:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/hmc_b0". 2025-10-09 22:05:57 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:06:17 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.21252s. 2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/pre_clip". 2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:06:19 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.580781s. 2025-10-09 22:06:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/SharpenEPI". 2025-10-09 22:06:21 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:06:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.292825s. 2025-10-09 22:06:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/hmc_b0". 2025-10-09 22:06:29 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:06:48 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 19.606643s. 2025-10-09 22:06:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/pre_clip". 2025-10-09 22:06:49 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:06:49 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.556731s. 2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/SharpenEPI". 2025-10-09 22:06:51 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:06:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.150651s. 2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/hmc_b0". 2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:07:23 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 24.627449s. 2025-10-09 22:07:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/pre_clip". 2025-10-09 22:07:25 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:07:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.58987s. 2025-10-09 22:07:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/SharpenEPI". 2025-10-09 22:07:27 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:07:34 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.206185s. 2025-10-09 22:07:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/hmc_b0". 2025-10-09 22:07:35 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:07:59 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 24.805274s. 2025-10-09 22:08:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/post_n4". 2025-10-09 22:08:01 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:08:25 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 23.967s. 2025-10-09 22:08:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/da238a71468e5da856c91a5f1994fca4d7f4141a/smoothness". 2025-10-09 22:08:27 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:08:31 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 4.41872s. 2025-10-09 22:08:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/PlotMosaicZoomed". 2025-10-09 22:08:33 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:08:37 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 4.436188s. 2025-10-09 22:08:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/PlotBrainmask". 2025-10-09 22:08:39 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:08:42 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.524718s. 2025-10-09 22:08:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/201569bd1b204b9060c6d20017c8e693a9845147/post_n4". 2025-10-09 22:08:43 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:09:07 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 24.265465s. 2025-10-09 22:09:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/201569bd1b204b9060c6d20017c8e693a9845147/smoothness". 2025-10-09 22:09:09 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:09:13 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 4.675365s. 2025-10-09 22:09:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/PlotMosaicZoomed". 2025-10-09 22:09:15 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:09:19 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 4.528852s. 2025-10-09 22:09:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/PlotBrainmask". 2025-10-09 22:09:21 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:09:24 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.46338s. 2025-10-09 22:09:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/pre_n4". 2025-10-09 22:09:25 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:09:32 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.061832s. 2025-10-09 22:09:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/pre_n4". 2025-10-09 22:09:33 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:09:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.096201s. 2025-10-09 22:09:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/pre_n4". 2025-10-09 22:09:41 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:09:48 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.203336s. 2025-10-09 22:09:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/pre_n4". 2025-10-09 22:09:49 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:09:56 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.084095s. 2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/pre_n4". 2025-10-09 22:09:57 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:10:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.065405s. 2025-10-09 22:10:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/pre_n4". 2025-10-09 22:10:05 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:10:12 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.030635s. 2025-10-09 22:10:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/pre_n4". 2025-10-09 22:10:13 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:10:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.101879s. 2025-10-09 22:10:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/pre_n4". 2025-10-09 22:10:21 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:10:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.073031s. 2025-10-09 22:10:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/final_masked". 2025-10-09 22:10:29 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:10:29 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.264903s. 2025-10-09 22:10:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization". 2025-10-09 22:10:31 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:10:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:11:42 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:11:42 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:11:58 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:11:59 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:11:59 | INFO | niworkflows | Generating visual report 2025-10-09 22:12:15 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 104.706391s. 2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/ds_report_zoomed". 2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004646s. 2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/ds_report_bmask". 2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004449s. 2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/201569bd1b204b9060c6d20017c8e693a9845147/final_masked". 2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:12:17 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.309494s. 2025-10-09 22:12:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization". 2025-10-09 22:12:19 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:12:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:13:33 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:13:33 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:13:49 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:13:51 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/201569bd1b204b9060c6d20017c8e693a9845147/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:13:51 | INFO | niworkflows | Generating visual report 2025-10-09 22:14:08 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 109.177758s. 2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/ds_report_zoomed". 2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004475s. 2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/ds_report_bmask". 2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.01421s. 2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/synthstrip". 2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:15:04 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 55.169881s. 2025-10-09 22:15:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/synthstrip". 2025-10-09 22:15:05 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:16:00 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 55.223733s. 2025-10-09 22:16:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/synthstrip". 2025-10-09 22:16:01 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:16:58 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 56.679707s. 2025-10-09 22:16:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/synthstrip". 2025-10-09 22:16:59 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:17:56 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 56.886539s. 2025-10-09 22:17:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/synthstrip". 2025-10-09 22:17:57 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.779411s. 2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/synthstrip". 2025-10-09 22:18:45 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:19:33 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.108896s. 2025-10-09 22:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/synthstrip". 2025-10-09 22:19:35 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.7679s. 2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/synthstrip". 2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 47.834299s. 2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/ds_report_norm". 2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00486s. 2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/201569bd1b204b9060c6d20017c8e693a9845147/ds_report_norm". 2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004922s. 2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/post_n4". 2025-10-09 22:21:11 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:21:14 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.284428s. 2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/sp_mask". 2025-10-09 22:21:15 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:21:16 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.961466s. 2025-10-09 22:21:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/drift". 2025-10-09 22:21:17 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:21:17 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.008, 1.0175, 0.9397, 1.0147, 1.0025, 1.0162. 2025-10-09 22:21:18 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.462874s. 2025-10-09 22:21:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/EPI2MNI". 2025-10-09 22:21:19 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:21:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:21:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/EPI2MNI/stderr.nipype-init). 2025-10-09 22:21:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:21:53 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:23:03 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:23:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:23:03 | INFO | niworkflows | Generating visual report 2025-10-09 22:23:20 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 121.039882s. 2025-10-09 22:23:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/post_n4". 2025-10-09 22:23:21 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:23:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.262433s. 2025-10-09 22:23:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/sp_mask". 2025-10-09 22:23:25 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:23:26 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.643745s. 2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/drift". 2025-10-09 22:23:27 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:23:27 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9707, 0.9901, 0.9883, 0.9904, 0.9853, 0.9829. 2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.5356619999999999s. 2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/EPI2MNI". 2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:23:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:24:02 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/EPI2MNI/stderr.nipype-init). 2025-10-09 22:24:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:24:02 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:25:09 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:25:09 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:25:09 | INFO | niworkflows | Generating visual report 2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 116.237787s. 2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/post_n4". 2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:25:29 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.163914s. 2025-10-09 22:25:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/sp_mask". 2025-10-09 22:25:31 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:25:32 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.7461s. 2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/drift". 2025-10-09 22:25:33 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:25:33 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9855, 1.0056, 1.0226, 0.9807, 0.912, 1.0182, 1.0205, 0.9993. 2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.780607s. 2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/EPI2MNI". 2025-10-09 22:25:35 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:25:35 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:26:08 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/EPI2MNI/stderr.nipype-init). 2025-10-09 22:26:08 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:26:08 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:27:15 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:27:15 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:27:15 | INFO | niworkflows | Generating visual report 2025-10-09 22:27:32 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 116.457365s. 2025-10-09 22:27:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/post_n4". 2025-10-09 22:27:33 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:27:35 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.173704s. 2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/sp_mask". 2025-10-09 22:27:37 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:27:38 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.744266s. 2025-10-09 22:27:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/drift". 2025-10-09 22:27:39 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:27:39 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9404, 0.9807, 0.9633, 1.0468, 1.0374, 0.985, 1.0219, 1.0059. 2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.764699s. 2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/EPI2MNI". 2025-10-09 22:27:41 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:27:41 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:28:11 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:28:11 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/SharpenEPI/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:29:19 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:29:19 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:29:19 | INFO | niworkflows | Generating visual report 2025-10-09 22:29:36 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.350061s. 2025-10-09 22:29:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/post_n4". 2025-10-09 22:29:37 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:29:40 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.212693s. 2025-10-09 22:29:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/sp_mask". 2025-10-09 22:29:41 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:29:42 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.569489s. 2025-10-09 22:29:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/drift". 2025-10-09 22:29:43 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:29:43 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9903, 0.9903, 0.9976, 1.0026, 0.9988, 1.0056. 2025-10-09 22:29:45 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.445019s. 2025-10-09 22:29:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/EPI2MNI". 2025-10-09 22:29:45 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:29:45 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:30:16 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/EPI2MNI/stderr.nipype-init). 2025-10-09 22:30:16 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:30:16 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:31:21 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:31:21 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:31:21 | INFO | niworkflows | Generating visual report 2025-10-09 22:31:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.745542s. 2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/post_n4". 2025-10-09 22:31:39 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:31:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.203595s. 2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/sp_mask". 2025-10-09 22:31:43 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:31:44 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.540991s. 2025-10-09 22:31:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/drift". 2025-10-09 22:31:45 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:31:45 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9411, 0.9193, 0.9317, 1.0005, 0.9267, 1.0041. 2025-10-09 22:31:47 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.415764s. 2025-10-09 22:31:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/EPI2MNI". 2025-10-09 22:31:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:31:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:32:16 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:32:16 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:33:23 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:33:23 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:33:23 | INFO | niworkflows | Generating visual report 2025-10-09 22:33:40 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.282733s. 2025-10-09 22:33:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/post_n4". 2025-10-09 22:33:41 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:33:44 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.177292s. 2025-10-09 22:33:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/sp_mask". 2025-10-09 22:33:45 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:33:46 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.846956s. 2025-10-09 22:33:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/drift". 2025-10-09 22:33:47 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:33:48 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9738, 0.9977, 1.004, 0.9996, 0.9951, 0.9625, 0.9954, 1.0031. 2025-10-09 22:33:49 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.7894860000000001s. 2025-10-09 22:33:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/EPI2MNI". 2025-10-09 22:33:49 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:33:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:34:19 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/EPI2MNI/stderr.nipype-init). 2025-10-09 22:34:19 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:34:19 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:35:27 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:35:27 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:35:27 | INFO | niworkflows | Generating visual report 2025-10-09 22:35:44 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.4873s. 2025-10-09 22:35:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/post_n4". 2025-10-09 22:35:45 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:35:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.214647s. 2025-10-09 22:35:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/sp_mask". 2025-10-09 22:35:49 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:35:50 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.778563s. 2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/drift". 2025-10-09 22:35:51 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:35:52 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9976, 0.9764, 1.0017, 0.9852, 0.995, 0.9782, 0.9904, 1.0034. 2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.817753s. 2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/EPI2MNI". 2025-10-09 22:35:53 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:35:53 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:36:24 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/EPI2MNI/stderr.nipype-init). 2025-10-09 22:36:24 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:36:24 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/SharpenEPI/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:37:32 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:37:32 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:37:32 | INFO | niworkflows | Generating visual report 2025-10-09 22:37:48 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.779066s. 2025-10-09 22:37:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/final_masked". 2025-10-09 22:37:50 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:37:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.030887s. 2025-10-09 22:37:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/dwidenoise". 2025-10-09 22:37:52 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:38:10 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 18.1668s. 2025-10-09 22:38:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/ResampleSegmentation". 2025-10-09 22:38:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:38:15 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.250118s. 2025-10-09 22:38:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8fda5306677586eff5748a755790e5f52cefcb68/final_masked". 2025-10-09 22:38:16 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:38:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037239s. 2025-10-09 22:38:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/dwidenoise". 2025-10-09 22:38:18 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 18.288386s. 2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8fda5306677586eff5748a755790e5f52cefcb68/ResampleSegmentation". 2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.394984s. 2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/final_masked". 2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.031784s. 2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/dwidenoise". 2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:39:16 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 32.424242s. 2025-10-09 22:39:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/ResampleSegmentation". 2025-10-09 22:39:18 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.208805s. 2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2849da61b7af1091f6f0edc71ac073d594885588/final_masked". 2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.030702s. 2025-10-09 22:39:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/dwidenoise". 2025-10-09 22:39:24 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:39:56 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 32.533079s. 2025-10-09 22:39:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2849da61b7af1091f6f0edc71ac073d594885588/ResampleSegmentation". 2025-10-09 22:39:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:40:01 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.1586629999999998s. 2025-10-09 22:40:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/final_masked". 2025-10-09 22:40:02 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:40:02 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.031907s. 2025-10-09 22:40:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/dwidenoise". 2025-10-09 22:40:04 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:40:22 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 18.61678s. 2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/bf189a5a498c67810dd235dcc488076c198d1fa8/ResampleSegmentation". 2025-10-09 22:40:24 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.277977s. 2025-10-09 22:40:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/26626567734536bcc8eaf26d14460f818f6205d0/final_masked". 2025-10-09 22:40:28 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:40:28 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.031551s. 2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/dwidenoise". 2025-10-09 22:40:30 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:40:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 18.55227s. 2025-10-09 22:40:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/26626567734536bcc8eaf26d14460f818f6205d0/ResampleSegmentation". 2025-10-09 22:40:50 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.299081s. 2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/final_masked". 2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.031284s. 2025-10-09 22:40:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/dwidenoise". 2025-10-09 22:40:56 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:41:29 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 33.424999s. 2025-10-09 22:41:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/f6bae3741b2d0e82d80bfa72c2495515531c942f/ResampleSegmentation". 2025-10-09 22:41:30 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:41:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.112385s. 2025-10-09 22:41:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/final_masked". 2025-10-09 22:41:34 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:41:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.032867s. 2025-10-09 22:41:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/dwidenoise". 2025-10-09 22:41:36 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:42:09 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 33.474439s. 2025-10-09 22:42:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/d3683441fb14f94ffedf06132aca58cf4e1c9099/ResampleSegmentation". 2025-10-09 22:42:10 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:42:13 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.267626s. 2025-10-09 22:42:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/dwimodel". 2025-10-09 22:42:14 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.385592s. 2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/estimate_sigma". 2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036798s. 2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/get_wm". 2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035156s. 2025-10-09 22:42:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/dwimodel". 2025-10-09 22:42:22 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:42:25 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.423729s. 2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8fda5306677586eff5748a755790e5f52cefcb68/estimate_sigma". 2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036595s. 2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/get_wm". 2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034375s. 2025-10-09 22:42:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/dwimodel". 2025-10-09 22:42:30 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:42:33 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.762439s. 2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/estimate_sigma". 2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.035953s. 2025-10-09 22:42:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/get_wm". 2025-10-09 22:42:36 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:42:36 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034584s. 2025-10-09 22:42:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/dwimodel". 2025-10-09 22:42:38 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.758322s. 2025-10-09 22:42:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2849da61b7af1091f6f0edc71ac073d594885588/estimate_sigma". 2025-10-09 22:42:42 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:42:42 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.035671s. 2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/get_wm". 2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034954s. 2025-10-09 22:42:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/dwimodel". 2025-10-09 22:42:46 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:42:49 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.436939s. 2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/bf189a5a498c67810dd235dcc488076c198d1fa8/estimate_sigma". 2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:42:50 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036176s. 2025-10-09 22:42:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/get_wm". 2025-10-09 22:42:52 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:42:52 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034537s. 2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/dwimodel". 2025-10-09 22:42:54 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.442088s. 2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/26626567734536bcc8eaf26d14460f818f6205d0/estimate_sigma". 2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.0361s. 2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/get_wm". 2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034714s. 2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/dwimodel". 2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:43:05 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.888476s. 2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/f6bae3741b2d0e82d80bfa72c2495515531c942f/estimate_sigma". 2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036384s. 2025-10-09 22:43:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/get_wm". 2025-10-09 22:43:10 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:43:10 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035623s. 2025-10-09 22:43:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/dwimodel". 2025-10-09 22:43:12 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:43:15 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.871904s. 2025-10-09 22:43:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/d3683441fb14f94ffedf06132aca58cf4e1c9099/estimate_sigma". 2025-10-09 22:43:16 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:43:16 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.0356s. 2025-10-09 22:43:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/get_wm". 2025-10-09 22:43:18 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:43:18 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034481s. 2025-10-09 22:43:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/cc_mask". 2025-10-09 22:43:20 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:43:20 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.515527s. 2025-10-09 22:43:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/mosaic_fa". 2025-10-09 22:43:22 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:43:23 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.328816s. 2025-10-09 22:43:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/mosaic_md". 2025-10-09 22:43:24 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:43:25 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.384989s. 2025-10-09 22:43:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/plot_heatmap". 2025-10-09 22:43:26 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:43:27 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.456935s. 2025-10-09 22:43:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/8fda5306677586eff5748a755790e5f52cefcb68/cc_mask". 2025-10-09 22:43:28 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:43:28 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.516506s. 2025-10-09 22:43:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/mosaic_fa". 2025-10-09 22:43:30 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:43:31 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.326612s. 2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/mosaic_md". 2025-10-09 22:43:32 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:43:33 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.6496870000000001s. 2025-10-09 22:43:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/plot_heatmap". 2025-10-09 22:43:34 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:43:35 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.142437s. 2025-10-09 22:43:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/cc_mask". 2025-10-09 22:43:36 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:43:36 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.4918s. 2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/mosaic_fa". 2025-10-09 22:43:38 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:43:39 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.400898s. 2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/mosaic_md". 2025-10-09 22:43:40 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:43:41 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.6526269999999998s. 2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/plot_heatmap". 2025-10-09 22:43:42 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:43:43 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.186245s. 2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/2849da61b7af1091f6f0edc71ac073d594885588/cc_mask". 2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:43:44 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.498817s. 2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/mosaic_fa". 2025-10-09 22:43:46 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:43:47 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.439851s. 2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/mosaic_md". 2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:43:49 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.592179s. 2025-10-09 22:43:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/plot_heatmap". 2025-10-09 22:43:50 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.19031s. 2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/bf189a5a498c67810dd235dcc488076c198d1fa8/cc_mask". 2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.521722s. 2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/mosaic_fa". 2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.4217330000000001s. 2025-10-09 22:43:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/mosaic_md". 2025-10-09 22:43:56 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.419847s. 2025-10-09 22:43:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/plot_heatmap". 2025-10-09 22:43:58 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.370811s. 2025-10-09 22:44:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/26626567734536bcc8eaf26d14460f818f6205d0/cc_mask". 2025-10-09 22:44:00 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:44:00 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.526608s. 2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/mosaic_fa". 2025-10-09 22:44:02 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:44:03 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.34714s. 2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/mosaic_md". 2025-10-09 22:44:04 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.5690499999999998s. 2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/plot_heatmap". 2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:44:07 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.1107339999999999s. 2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/f6bae3741b2d0e82d80bfa72c2495515531c942f/cc_mask". 2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.489407s. 2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/mosaic_fa". 2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:44:11 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.510953s. 2025-10-09 22:44:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/mosaic_md". 2025-10-09 22:44:12 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:44:13 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.430301s. 2025-10-09 22:44:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/plot_heatmap". 2025-10-09 22:44:14 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:44:15 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.181327s. 2025-10-09 22:44:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/d3683441fb14f94ffedf06132aca58cf4e1c9099/cc_mask". 2025-10-09 22:44:16 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:44:16 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.495862s. 2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/mosaic_fa". 2025-10-09 22:44:18 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:44:19 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.609715s. 2025-10-09 22:44:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/mosaic_md". 2025-10-09 22:44:20 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:44:21 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.466315s. 2025-10-09 22:44:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/plot_heatmap". 2025-10-09 22:44:22 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.185275s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/ds_report_fa". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005049s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/ds_report_md". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004697s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/a8ddd7a253cd9a092240baa3fcc1dc45ff55a7d2/ds_report_hm". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.009604s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/ds_report_fa". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004619s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/ds_report_md". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004649s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8fda5306677586eff5748a755790e5f52cefcb68/ds_report_hm". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004924s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/ds_report_fa". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004829s. 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/ds_report_md". 2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004595s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/28bd6f95285efbf0ee56f27cc2aa90b99f8e5331/ds_report_hm". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004627s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/ds_report_fa". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004568s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/ds_report_md". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004647s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2849da61b7af1091f6f0edc71ac073d594885588/ds_report_hm". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004702s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/ds_report_fa". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004691s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/ds_report_md". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004723s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/bf189a5a498c67810dd235dcc488076c198d1fa8/ds_report_hm". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004709s. 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/ds_report_fa". 2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004718s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/ds_report_md". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004604s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/26626567734536bcc8eaf26d14460f818f6205d0/ds_report_hm". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004683s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/ds_report_fa". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004618s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/ds_report_md". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004636s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/f6bae3741b2d0e82d80bfa72c2495515531c942f/ds_report_hm". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005007s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/ds_report_fa". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004712s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/ds_report_md". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004754s. 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/d3683441fb14f94ffedf06132aca58cf4e1c9099/ds_report_hm". 2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:44:26 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004715s. 2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0"  2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 8.05003s. 2025-10-09 22:44:37 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:44:37 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1"  2025-10-09 22:44:45 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 8.109666s. 2025-10-09 22:44:47 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:44:47 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2"  2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 7.958223s. 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached. 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached. 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/da238a71468e5da856c91a5f1994fca4d7f4141a/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs 2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached. 2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/da238a71468e5da856c91a5f1994fca4d7f4141a/Enhance". 2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Executing "Enhance"  2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.564195s. 2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/da238a71468e5da856c91a5f1994fca4d7f4141a/format_tpm_names". 2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Executing "format_tpm_names"  2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.685984s. 2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/da238a71468e5da856c91a5f1994fca4d7f4141a/Grad". 2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Executing "Grad"  2025-10-09 22:45:09 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 6.530574s. 2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/da238a71468e5da856c91a5f1994fca4d7f4141a/apply_mask". 2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Executing "apply_mask"  2025-10-09 22:45:11 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.273626s. 2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/da238a71468e5da856c91a5f1994fca4d7f4141a/GradientThreshold". 2025-10-09 22:45:13 | INFO | nipype.workflow | [Node] Executing "GradientThreshold"  2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 14.253175s. 2025-10-09 22:45:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/da238a71468e5da856c91a5f1994fca4d7f4141a/segmentation". 2025-10-09 22:45:29 | INFO | nipype.workflow | [Node] Executing "segmentation"  2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 83.58311s. 2025-10-09 22:46:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/da238a71468e5da856c91a5f1994fca4d7f4141a/ArtifactMask". 2025-10-09 22:46:53 | INFO | nipype.workflow | [Node] Executing "ArtifactMask"  2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.021762s. 2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/PlotHeadmask". 2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask"  2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.002037s. 2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/da238a71468e5da856c91a5f1994fca4d7f4141a/harmonize". 2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Executing "harmonize"  2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.006207s. 2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/da238a71468e5da856c91a5f1994fca4d7f4141a/PlotSegmentation". 2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation"  2025-10-09 22:47:10 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.460896s. 2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/da238a71468e5da856c91a5f1994fca4d7f4141a/provenance". 2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.052605s. 2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/da238a71468e5da856c91a5f1994fca4d7f4141a/ComputeQI2". 2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Executing "ComputeQI2"  2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 0.229947s. 2025-10-09 22:47:11 | WARNING | nipype.workflow | Storing result file without outputs 2025-10-09 22:47:11 | WARNING | nipype.workflow | [Node] Error on "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" (/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/da238a71468e5da856c91a5f1994fca4d7f4141a/ComputeQI2) 2025-10-09 22:47:11 | ERROR | nipype.workflow | Node ComputeQI2.a0 (taskid=239) crashed: /var/lib/condor/execute/dir_3951239/ds/logs/crash-20251009-224711-fhoffstaedter-ComputeQI2.a0-4921857f-453e-49db-9f12-f47182ba5c5a.txt get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/anat/sub-cIVs032_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/dwi/sub-cIVs032_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/dwi/sub-cIVs032_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-215_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/dwi/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/dwi/sub-cIVs032_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/dwi/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx1/dwi/sub-cIVs032_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/anat/sub-cIVs032_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/dwi/sub-cIVs032_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-114_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/dwi/sub-cIVs032_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-217_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/dwi/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-115_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/dwi/sub-cIVs032_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-218_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/dwi/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032/ses-s1Bx2/dwi/sub-cIVs032_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs032 (directory) get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...] run(error): /var/lib/condor/execute/dir_3951239/ds (dataset) [./code/containers/scripts/singularity_cm...] action summary: get (notneeded: 4, ok: 16) run (error: 1)