install(ok): /var/lib/condor/execute/dir_3951177/ds (dataset) install(ok): /var/lib/condor/execute/dir_3951177/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_3951177/ds/sourcedata/raw] ------------------------------------------------------------------ Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826 ---------------------------------------------------------------- NOTICE Copyright © The NiPreps Developers. This product includes software developed by the NiPreps Community (https://nipreps.org/). Portions of this software were developed at the Department of Psychology at Stanford University, Stanford, CA, US. This software contains code ultimately derived from the PCP Quality Assessment Protocol (QAP; http://preprocessed-connectomes-project.org/quality-assessment-protocol) by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman. This software is also distributed as a Docker container image. The bootstrapping file for the image ("Dockerfile") is licensed under the MIT License. ---------------------------------------------------------------- * BIDS dataset path: /var/lib/condor/execute/dir_3951177/ds/sourcedata/raw. * Output folder: .. * Analysis levels: ['participant']. ------------------------------------------------------------------ 2025-10-09 21:58:48 | IMPORTANT | mriqc | Extracting metadata and entities for 2 input runs of modality 't1w'... 2025-10-09 21:58:48 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.00 GB [maximum|average]. 2025-10-09 21:58:48 | IMPORTANT | mriqc | Extracting metadata and entities for 12 input runs of modality 'dwi'... 2025-10-09 21:58:48 | WARNING | nipype.workflow | 4 cannot be processed (too short or too long) 2025-10-09 21:58:48 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average]. 2025-10-09 21:58:48 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215846_7de4a129-842c-4344-9226-6e4970072d73.toml. 2025-10-09 21:58:53 | INFO | matplotlib.font_manager | generated new fontManager 2025-10-09 21:58:54 | IMPORTANT | mriqc | Building MRIQC's workflows... 2025-10-09 21:58:54 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 8 NIfTI files.. 2025-10-09 21:58:55 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 2 NIfTI files.. 2025-10-09 21:58:59 | IMPORTANT | mriqc | Workflow building finished (exit code 0). 2025-10-09 21:59:03 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring'] 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/613ed6d8236b06ced679b89c4ef6be3ecd19998e/conform". 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.280167s. 2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/27ffbc8d774ba7a8fc11186a92968b7c14227802/conform". 2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:59:06 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.674184s. 2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/load_bmat". 2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:08 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.166401s. 2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/provenance". 2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020114s. 2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/sanitize". 2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:10 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.022536s. 2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/load_bmat". 2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:12 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02428s. 2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/75d67662372bb4bc50b09d92269a764dd015004e/provenance". 2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020861s. 2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/sanitize". 2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:14 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.023263s. 2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/load_bmat". 2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:16 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.02507s. 2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4965dd190e2de0364bb795d3f9523e38f6c41878/provenance". 2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025719s. 2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/sanitize". 2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:18 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.022311s. 2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/load_bmat". 2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:20 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024289s. 2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2051933285dc8a4fa54797178da1a1e4553c196e/provenance". 2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.025419s. 2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/sanitize". 2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:22 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.022643s. 2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/load_bmat". 2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:24 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024145s. 2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/provenance". 2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021248s. 2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/sanitize". 2025-10-09 21:59:26 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:27 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.770634s. 2025-10-09 21:59:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/load_bmat". 2025-10-09 21:59:28 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:28 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024199s. 2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/provenance". 2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021075s. 2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/sanitize". 2025-10-09 21:59:30 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:31 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.802047s. 2025-10-09 21:59:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/load_bmat". 2025-10-09 21:59:32 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:32 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.023754s. 2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/provenance". 2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.026885s. 2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/sanitize". 2025-10-09 21:59:34 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:35 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.034807s. 2025-10-09 21:59:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/load_bmat". 2025-10-09 21:59:36 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:59:36 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.024627s. 2025-10-09 21:59:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/33077dc715ce490fa592fbfdd43981cb62f0259d/provenance". 2025-10-09 21:59:38 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:59:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.028339s. 2025-10-09 21:59:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/sanitize". 2025-10-09 21:59:38 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:59:39 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.037794s. 2025-10-09 21:59:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/pre_clip". 2025-10-09 21:59:40 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:59:49 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.172545s. 2025-10-09 21:59:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/613ed6d8236b06ced679b89c4ef6be3ecd19998e/RotationMask". 2025-10-09 21:59:50 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:59:50 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.675248s. 2025-10-09 21:59:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/PlotMosaicNoise". 2025-10-09 21:59:52 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:59:57 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.906396s. 2025-10-09 21:59:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/pre_clip". 2025-10-09 21:59:58 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:00:08 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 10.487611s. 2025-10-09 22:00:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/27ffbc8d774ba7a8fc11186a92968b7c14227802/RotationMask". 2025-10-09 22:00:10 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 22:00:11 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.970443s. 2025-10-09 22:00:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/PlotMosaicNoise". 2025-10-09 22:00:12 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 22:00:17 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.067321s. 2025-10-09 22:00:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/shells". 2025-10-09 22:00:18 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:18 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000681s. 2025-10-09 22:00:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/piesno". 2025-10-09 22:00:20 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:21 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.856624s. 2025-10-09 22:00:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/shells". 2025-10-09 22:00:22 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000642s. 2025-10-09 22:00:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/piesno". 2025-10-09 22:00:24 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:25 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.897802s. 2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/shells". 2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:26 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000688s. 2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/piesno". 2025-10-09 22:00:28 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:29 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.220273s. 2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/shells". 2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:30 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000678s. 2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/piesno". 2025-10-09 22:00:32 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.2660040000000001s. 2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/shells". 2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:34 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000647s. 2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/piesno". 2025-10-09 22:00:36 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.943703s. 2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/shells". 2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:38 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000683s. 2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/piesno". 2025-10-09 22:00:40 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:41 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.969084s. 2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/shells". 2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:42 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000685s. 2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/piesno". 2025-10-09 22:00:44 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:45 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.210624s. 2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/shells". 2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 22:00:46 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000675s. 2025-10-09 22:00:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/piesno". 2025-10-09 22:00:48 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 22:00:49 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.2802310000000001s. 2025-10-09 22:00:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/pre_n4". 2025-10-09 22:00:50 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:02:54 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 123.518381s. 2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ds_report_background". 2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008402s. 2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/pre_n4". 2025-10-09 22:02:56 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:05:01 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 125.032346s. 2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/ds_report_background". 2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.00516s. 2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/dwi_ref". 2025-10-09 22:05:02 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:03 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.542161s. 2025-10-09 22:05:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/get_lowb". 2025-10-09 22:05:04 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:04 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.511467s. 2025-10-09 22:05:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/dwi_ref". 2025-10-09 22:05:06 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:07 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.661037s. 2025-10-09 22:05:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/get_lowb". 2025-10-09 22:05:08 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:08 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.329723s. 2025-10-09 22:05:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/dwi_ref". 2025-10-09 22:05:10 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:11 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.627707s. 2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/get_lowb". 2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:12 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.42306s. 2025-10-09 22:05:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/dwi_ref". 2025-10-09 22:05:14 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:15 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.091221s. 2025-10-09 22:05:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/get_lowb". 2025-10-09 22:05:16 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:16 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.43576s. 2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/dwi_ref". 2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:19 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.601831s. 2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/get_lowb". 2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.476075s. 2025-10-09 22:05:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/dwi_ref". 2025-10-09 22:05:22 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:23 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.562759s. 2025-10-09 22:05:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/get_lowb". 2025-10-09 22:05:24 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:24 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.319478s. 2025-10-09 22:05:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/dwi_ref". 2025-10-09 22:05:26 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:27 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.723803s. 2025-10-09 22:05:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/get_lowb". 2025-10-09 22:05:28 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:28 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.410207s. 2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/dwi_ref". 2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:05:31 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.651225s. 2025-10-09 22:05:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/get_lowb". 2025-10-09 22:05:32 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:05:32 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.400604s. 2025-10-09 22:05:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/synthstrip". 2025-10-09 22:05:34 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:06:59 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 84.93326s. 2025-10-09 22:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/synthstrip". 2025-10-09 22:07:00 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:08:22 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 81.550853s. 2025-10-09 22:08:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/pre_clip". 2025-10-09 22:08:22 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:08:23 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.576109s. 2025-10-09 22:08:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/SharpenEPI". 2025-10-09 22:08:24 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:08:31 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.063419s. 2025-10-09 22:08:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/hmc_b0". 2025-10-09 22:08:32 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:08:52 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 20.042521s. 2025-10-09 22:08:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/pre_clip". 2025-10-09 22:08:54 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:08:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.58396s. 2025-10-09 22:08:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/SharpenEPI". 2025-10-09 22:08:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:09:03 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.154064s. 2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/hmc_b0". 2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:09:24 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 19.871747s. 2025-10-09 22:09:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/pre_clip". 2025-10-09 22:09:26 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:09:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.578976s. 2025-10-09 22:09:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/SharpenEPI". 2025-10-09 22:09:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:09:35 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.076263s. 2025-10-09 22:09:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/hmc_b0". 2025-10-09 22:09:36 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:10:01 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 25.38039s. 2025-10-09 22:10:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/pre_clip". 2025-10-09 22:10:02 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:10:03 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.588742s. 2025-10-09 22:10:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/SharpenEPI". 2025-10-09 22:10:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:10:11 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.062553s. 2025-10-09 22:10:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/hmc_b0". 2025-10-09 22:10:12 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:10:37 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 24.784244s. 2025-10-09 22:10:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/pre_clip". 2025-10-09 22:10:38 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:10:39 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.58473s. 2025-10-09 22:10:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/SharpenEPI". 2025-10-09 22:10:40 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:10:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.073889s. 2025-10-09 22:10:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/hmc_b0". 2025-10-09 22:10:48 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:11:08 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 19.513901s. 2025-10-09 22:11:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/pre_clip". 2025-10-09 22:11:08 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:11:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.582658s. 2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/SharpenEPI". 2025-10-09 22:11:10 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:11:17 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.033614s. 2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/hmc_b0". 2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:11:38 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 19.511029s. 2025-10-09 22:11:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/pre_clip". 2025-10-09 22:11:38 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:11:39 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.587875s. 2025-10-09 22:11:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/SharpenEPI". 2025-10-09 22:11:40 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:11:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.044461s. 2025-10-09 22:11:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/hmc_b0". 2025-10-09 22:11:48 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:12:12 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 24.331785s. 2025-10-09 22:12:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/pre_clip". 2025-10-09 22:12:14 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:12:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.604237s. 2025-10-09 22:12:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/SharpenEPI". 2025-10-09 22:12:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:12:23 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.051537s. 2025-10-09 22:12:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/hmc_b0". 2025-10-09 22:12:24 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:12:49 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 24.501382s. 2025-10-09 22:12:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/post_n4". 2025-10-09 22:12:50 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:13:15 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 24.647156s. 2025-10-09 22:13:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/613ed6d8236b06ced679b89c4ef6be3ecd19998e/smoothness". 2025-10-09 22:13:16 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:13:21 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 4.656736s. 2025-10-09 22:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/PlotMosaicZoomed". 2025-10-09 22:13:22 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:13:27 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 4.635627s. 2025-10-09 22:13:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/PlotBrainmask". 2025-10-09 22:13:28 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.53199s. 2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/post_n4". 2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:13:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 24.62785s. 2025-10-09 22:13:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/27ffbc8d774ba7a8fc11186a92968b7c14227802/smoothness". 2025-10-09 22:13:58 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:14:03 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 4.496005s. 2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/PlotMosaicZoomed". 2025-10-09 22:14:04 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:14:09 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 4.680613s. 2025-10-09 22:14:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/PlotBrainmask". 2025-10-09 22:14:10 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:14:14 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 3.995958s. 2025-10-09 22:14:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/pre_n4". 2025-10-09 22:14:16 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:14:23 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.141496s. 2025-10-09 22:14:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/pre_n4". 2025-10-09 22:14:24 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:14:31 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.148291s. 2025-10-09 22:14:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/pre_n4". 2025-10-09 22:14:32 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:14:39 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.154252s. 2025-10-09 22:14:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/pre_n4". 2025-10-09 22:14:40 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:14:47 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.137954s. 2025-10-09 22:14:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/pre_n4". 2025-10-09 22:14:48 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:14:55 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.139842s. 2025-10-09 22:14:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/pre_n4". 2025-10-09 22:14:56 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:15:03 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.1263s. 2025-10-09 22:15:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/pre_n4". 2025-10-09 22:15:04 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:15:11 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.116932s. 2025-10-09 22:15:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/pre_n4". 2025-10-09 22:15:12 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:15:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.121977s. 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/final_masked". 2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:15:20 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.303055s. 2025-10-09 22:15:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization". 2025-10-09 22:15:22 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:15:23 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:16:43 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/stderr.nipype-init). 2025-10-09 22:16:43 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:16:43 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:17:00 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:17:01 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:17:01 | INFO | niworkflows | Generating visual report 2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 117.495514s. 2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ds_report_zoomed". 2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.0053s. 2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ds_report_bmask". 2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:17:20 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004902s. 2025-10-09 22:17:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/final_masked". 2025-10-09 22:17:21 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:17:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.33169s. 2025-10-09 22:17:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization". 2025-10-09 22:17:22 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:17:23 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:18:43 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:18:43 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:19:00 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:19:02 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/27ffbc8d774ba7a8fc11186a92968b7c14227802/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:19:02 | INFO | niworkflows | Generating visual report 2025-10-09 22:19:21 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 118.836866s. 2025-10-09 22:19:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/ds_report_zoomed". 2025-10-09 22:19:22 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:19:22 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004858s. 2025-10-09 22:19:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/ds_report_bmask". 2025-10-09 22:19:23 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:19:23 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004913s. 2025-10-09 22:19:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/synthstrip". 2025-10-09 22:19:23 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:20:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 58.182044s. 2025-10-09 22:20:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/synthstrip". 2025-10-09 22:20:22 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:21:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 58.412041s. 2025-10-09 22:21:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/synthstrip". 2025-10-09 22:21:23 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:22:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 58.016885s. 2025-10-09 22:22:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/synthstrip". 2025-10-09 22:22:22 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:23:20 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 57.162596s. 2025-10-09 22:23:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/synthstrip". 2025-10-09 22:23:20 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:24:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.83453s. 2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/synthstrip". 2025-10-09 22:24:02 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:24:43 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.295943s. 2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/synthstrip". 2025-10-09 22:24:45 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:25:25 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.025979s. 2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/synthstrip". 2025-10-09 22:25:27 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:26:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.702105s. 2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ds_report_norm". 2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004628s. 2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/27ffbc8d774ba7a8fc11186a92968b7c14227802/ds_report_norm". 2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004483s. 2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/post_n4". 2025-10-09 22:26:07 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:26:09 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.253167s. 2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/sp_mask". 2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:26:11 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.582123s. 2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/drift". 2025-10-09 22:26:13 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:26:13 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0124, 1.0095, 1.0141, 1.0095, 1.012, 0.9628. 2025-10-09 22:26:14 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.538877s. 2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/EPI2MNI". 2025-10-09 22:26:15 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:26:15 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:26:44 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/EPI2MNI/stderr.nipype-init). 2025-10-09 22:26:44 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:26:44 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:27:53 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:27:53 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:27:53 | INFO | niworkflows | Generating visual report 2025-10-09 22:28:09 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.849861s. 2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/post_n4". 2025-10-09 22:28:11 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:28:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.2526s. 2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/sp_mask". 2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:28:15 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.579652s. 2025-10-09 22:28:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/drift". 2025-10-09 22:28:17 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:28:17 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0013, 0.9964, 1.0036, 0.9993, 0.8944, 0.979. 2025-10-09 22:28:18 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.423076s. 2025-10-09 22:28:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/EPI2MNI". 2025-10-09 22:28:19 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:28:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:28:46 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:28:46 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:29:53 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:29:53 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:29:53 | INFO | niworkflows | Generating visual report 2025-10-09 22:30:10 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.357056s. 2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/post_n4". 2025-10-09 22:30:11 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:30:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.253901s. 2025-10-09 22:30:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/sp_mask". 2025-10-09 22:30:15 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.844701s. 2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/drift". 2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:30:17 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0006, 0.999, 1.0063, 1.0066, 1.0005, 0.9667, 1.0051, 1.0099. 2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.861596s. 2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/EPI2MNI". 2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:30:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:30:46 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/EPI2MNI/stderr.nipype-init). 2025-10-09 22:30:46 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:30:46 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:31:53 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:31:53 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:31:53 | INFO | niworkflows | Generating visual report 2025-10-09 22:32:10 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.644425s. 2025-10-09 22:32:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/post_n4". 2025-10-09 22:32:11 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:32:13 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.269603s. 2025-10-09 22:32:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/sp_mask". 2025-10-09 22:32:15 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:32:16 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.853525s. 2025-10-09 22:32:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/drift". 2025-10-09 22:32:17 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:32:17 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9997, 0.9708, 0.9858, 0.9957, 0.9908, 0.9769, 0.9868, 1.0078. 2025-10-09 22:32:19 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.8752529999999998s. 2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/EPI2MNI". 2025-10-09 22:32:21 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:32:21 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:32:51 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:32:51 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/SharpenEPI/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:33:59 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:33:59 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:33:59 | INFO | niworkflows | Generating visual report 2025-10-09 22:34:16 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 114.949191s. 2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/post_n4". 2025-10-09 22:34:17 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:34:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.323378s. 2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/sp_mask". 2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:34:21 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.568743s. 2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/drift". 2025-10-09 22:34:23 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:34:23 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0024, 0.9994, 1.0053, 1.001, 1.0041, 0.996. 2025-10-09 22:34:24 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.505063s. 2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/EPI2MNI". 2025-10-09 22:34:25 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:34:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:34:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/EPI2MNI/stderr.nipype-init). 2025-10-09 22:34:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:34:53 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-108_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:35:59 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:35:59 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:35:59 | INFO | niworkflows | Generating visual report 2025-10-09 22:36:16 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.635307s. 2025-10-09 22:36:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/post_n4". 2025-10-09 22:36:17 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:36:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.310803s. 2025-10-09 22:36:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/sp_mask". 2025-10-09 22:36:21 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:36:21 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.593287s. 2025-10-09 22:36:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/drift". 2025-10-09 22:36:23 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:36:23 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9967, 0.9993, 1.0021, 1.0044, 1.0017, 0.9972. 2025-10-09 22:36:24 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.4865840000000001s. 2025-10-09 22:36:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/EPI2MNI". 2025-10-09 22:36:25 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:36:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:36:54 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/EPI2MNI/stderr.nipype-init). 2025-10-09 22:36:54 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:36:54 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-211_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:38:01 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:38:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:38:01 | INFO | niworkflows | Generating visual report 2025-10-09 22:38:18 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.889411s. 2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/post_n4". 2025-10-09 22:38:19 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:38:21 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.293657s. 2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/sp_mask". 2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.8627s. 2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/drift". 2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:38:25 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.0008, 0.9974, 0.9975, 1.0035, 1.0023, 0.9984, 1.0047, 0.9937. 2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.87691s. 2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/EPI2MNI". 2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:38:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:38:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:38:58 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-106_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:40:04 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:40:04 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:40:04 | INFO | niworkflows | Generating visual report 2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 111.680385s. 2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/post_n4". 2025-10-09 22:40:21 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:40:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.293953s. 2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/sp_mask". 2025-10-09 22:40:25 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:40:26 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.857728s. 2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/drift". 2025-10-09 22:40:27 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:40:27 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 1.001, 0.9981, 1.0041, 1.0068, 1.0028, 1.0017, 1.0074, 0.9952. 2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.8489499999999999s. 2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/EPI2MNI". 2025-10-09 22:40:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:40:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:40:58 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/EPI2MNI/stderr.nipype-init). 2025-10-09 22:40:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:40:58 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/SharpenEPI/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-209_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:42:01 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:42:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:42:01 | INFO | niworkflows | Generating visual report 2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 109.710107s. 2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/final_masked". 2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.032348s. 2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/dwidenoise". 2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 19.764416s. 2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/ResampleSegmentation". 2025-10-09 22:42:41 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.352078s. 2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/75d67662372bb4bc50b09d92269a764dd015004e/final_masked". 2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.032023s. 2025-10-09 22:42:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/dwidenoise". 2025-10-09 22:42:47 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:43:07 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 19.613268s. 2025-10-09 22:43:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/75d67662372bb4bc50b09d92269a764dd015004e/ResampleSegmentation". 2025-10-09 22:43:07 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:43:10 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.323335s. 2025-10-09 22:43:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/final_masked". 2025-10-09 22:43:11 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:43:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.032596s. 2025-10-09 22:43:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/dwidenoise". 2025-10-09 22:43:13 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:43:48 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 35.228785s. 2025-10-09 22:43:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4965dd190e2de0364bb795d3f9523e38f6c41878/ResampleSegmentation". 2025-10-09 22:43:49 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.391397s. 2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/2051933285dc8a4fa54797178da1a1e4553c196e/final_masked". 2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.033623s. 2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/dwidenoise". 2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:44:30 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 34.57115s. 2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/2051933285dc8a4fa54797178da1a1e4553c196e/ResampleSegmentation". 2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:44:34 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.389123s. 2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/final_masked". 2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:44:35 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.033588s. 2025-10-09 22:44:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/dwidenoise". 2025-10-09 22:44:37 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:44:57 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 20.033098s. 2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/ResampleSegmentation". 2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.331998s. 2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/final_masked". 2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.035313s. 2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/dwidenoise". 2025-10-09 22:45:05 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:45:25 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 20.059018s. 2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/ResampleSegmentation". 2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.127233s. 2025-10-09 22:45:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/final_masked". 2025-10-09 22:45:31 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:45:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.033109s. 2025-10-09 22:45:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/dwidenoise". 2025-10-09 22:45:33 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:46:10 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 36.436391s. 2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/ResampleSegmentation". 2025-10-09 22:46:11 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.421374s. 2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/final_masked". 2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:46:15 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.033153s. 2025-10-09 22:46:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/dwidenoise". 2025-10-09 22:46:17 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:46:53 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 36.32151s. 2025-10-09 22:46:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/33077dc715ce490fa592fbfdd43981cb62f0259d/ResampleSegmentation". 2025-10-09 22:46:55 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.210997s. 2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/dwimodel". 2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.68861s. 2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/estimate_sigma". 2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.038231s. 2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/get_wm". 2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035894s. 2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/dwimodel". 2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.606154s. 2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/75d67662372bb4bc50b09d92269a764dd015004e/estimate_sigma". 2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.038133s. 2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/get_wm". 2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035808s. 2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/dwimodel". 2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.037194s. 2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4965dd190e2de0364bb795d3f9523e38f6c41878/estimate_sigma". 2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:21 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036785s. 2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/get_wm". 2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:23 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035697s. 2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/dwimodel". 2025-10-09 22:47:25 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:29 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.95399s. 2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/2051933285dc8a4fa54797178da1a1e4553c196e/estimate_sigma". 2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:31 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036576s. 2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/get_wm". 2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:33 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.037183s. 2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/dwimodel". 2025-10-09 22:47:35 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.677097s. 2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/estimate_sigma". 2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036777s. 2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/get_wm". 2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:41 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.03569s. 2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/dwimodel". 2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:47 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.676361s. 2025-10-09 22:47:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/estimate_sigma". 2025-10-09 22:47:47 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:47 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.03863s. 2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/get_wm". 2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:49 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035298s. 2025-10-09 22:47:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/dwimodel". 2025-10-09 22:47:51 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:47:55 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.123276s. 2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/estimate_sigma". 2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:47:57 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.054867s. 2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/get_wm". 2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:47:59 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034799s. 2025-10-09 22:48:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/dwimodel". 2025-10-09 22:48:01 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:48:05 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.121531s. 2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/33077dc715ce490fa592fbfdd43981cb62f0259d/estimate_sigma". 2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:48:07 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.036274s. 2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/get_wm". 2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:48:09 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035212s. 2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/cc_mask". 2025-10-09 22:48:11 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:48:12 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.516197s. 2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/mosaic_fa". 2025-10-09 22:48:13 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.4735559999999999s. 2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/mosaic_md". 2025-10-09 22:48:15 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.482154s. 2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/plot_heatmap". 2025-10-09 22:48:17 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:48:19 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.477079s. 2025-10-09 22:48:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/75d67662372bb4bc50b09d92269a764dd015004e/cc_mask". 2025-10-09 22:48:19 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:48:20 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.505054s. 2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/mosaic_fa". 2025-10-09 22:48:21 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.376994s. 2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/mosaic_md". 2025-10-09 22:48:23 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.682364s. 2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/plot_heatmap". 2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:48:26 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.1473849999999999s. 2025-10-09 22:48:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/4965dd190e2de0364bb795d3f9523e38f6c41878/cc_mask". 2025-10-09 22:48:27 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:48:28 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.516071s. 2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/mosaic_fa". 2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.546114s. 2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/mosaic_md". 2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.739773s. 2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/plot_heatmap". 2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:48:34 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.184812s. 2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/2051933285dc8a4fa54797178da1a1e4553c196e/cc_mask". 2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:48:36 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.523284s. 2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/mosaic_fa". 2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.5867550000000001s. 2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/mosaic_md". 2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.855964s. 2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/plot_heatmap". 2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:48:42 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.214522s. 2025-10-09 22:48:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/cc_mask". 2025-10-09 22:48:43 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:48:44 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.496377s. 2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/mosaic_fa". 2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.539766s. 2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/mosaic_md". 2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.553833s. 2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/plot_heatmap". 2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.458361s. 2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/cc_mask". 2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.490363s. 2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/mosaic_fa". 2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.5601669999999999s. 2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/mosaic_md". 2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.790198s. 2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/plot_heatmap". 2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:48:58 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.16744s. 2025-10-09 22:48:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/cc_mask". 2025-10-09 22:48:59 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:49:00 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.525291s. 2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/mosaic_fa". 2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.742854s. 2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/mosaic_md". 2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.784502s. 2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/plot_heatmap". 2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.266056s. 2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/33077dc715ce490fa592fbfdd43981cb62f0259d/cc_mask". 2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.566025s. 2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/mosaic_fa". 2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.6984599999999999s. 2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/mosaic_md". 2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.825178s. 2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/plot_heatmap". 2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:49:14 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.266557s. 2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/ds_report_fa". 2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005235s. 2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/ds_report_md". 2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005029s. 2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/b78dc28d1d7ea70bd69784d4f92a9b9d03e41102/ds_report_hm". 2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:15 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005484s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/ds_report_fa". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.00481s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/ds_report_md". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004823s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/75d67662372bb4bc50b09d92269a764dd015004e/ds_report_hm". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.00726s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/ds_report_fa". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004993s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/ds_report_md". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005103s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4965dd190e2de0364bb795d3f9523e38f6c41878/ds_report_hm". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004988s. 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/ds_report_fa". 2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004861s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/ds_report_md". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.00495s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/2051933285dc8a4fa54797178da1a1e4553c196e/ds_report_hm". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005028s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/ds_report_fa". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005443s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/ds_report_md". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005532s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/4c3fe6352ca74b8c494a500ef8e99221ac637f9d/ds_report_hm". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005223s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/ds_report_fa". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004978s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/ds_report_md". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004884s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/8d0bd2c323410a7e6c4359980e987d9321fdd4c7/ds_report_hm". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005026s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/ds_report_fa". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005069s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/ds_report_md". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005011s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/cd4b6ac76be889b5147f2e5d5769730cc52e8c7d/ds_report_hm". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005015s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/ds_report_fa". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005022s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/ds_report_md". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004908s. 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/33077dc715ce490fa592fbfdd43981cb62f0259d/ds_report_hm". 2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005002s. 2025-10-09 22:49:19 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:49:19 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0"  2025-10-09 22:49:27 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 8.517311s. 2025-10-09 22:49:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:49:29 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1"  2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 8.513695s. 2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2"  2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 8.513008s. 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached. 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached. 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/613ed6d8236b06ced679b89c4ef6be3ecd19998e/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs 2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached. 2025-10-09 22:49:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/613ed6d8236b06ced679b89c4ef6be3ecd19998e/Enhance". 2025-10-09 22:49:51 | INFO | nipype.workflow | [Node] Executing "Enhance"  2025-10-09 22:49:51 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.602426s. 2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/613ed6d8236b06ced679b89c4ef6be3ecd19998e/format_tpm_names". 2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "format_tpm_names"  2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.7515s. 2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/613ed6d8236b06ced679b89c4ef6be3ecd19998e/Grad". 2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "Grad"  2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 6.58879s. 2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/613ed6d8236b06ced679b89c4ef6be3ecd19998e/apply_mask". 2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "apply_mask"  2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.284107s. 2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/613ed6d8236b06ced679b89c4ef6be3ecd19998e/GradientThreshold". 2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Executing "GradientThreshold"  2025-10-09 22:50:19 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 14.179065s. 2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/613ed6d8236b06ced679b89c4ef6be3ecd19998e/segmentation". 2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Executing "segmentation"  2025-10-09 22:51:49 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 88.098245s. 2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ArtifactMask". 2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Executing "ArtifactMask"  2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.350329s. 2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/PlotHeadmask". 2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask"  2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.35478s. 2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/613ed6d8236b06ced679b89c4ef6be3ecd19998e/harmonize". 2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Executing "harmonize"  2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.097931s. 2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/613ed6d8236b06ced679b89c4ef6be3ecd19998e/PlotSegmentation". 2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation"  2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.512142s. 2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/613ed6d8236b06ced679b89c4ef6be3ecd19998e/provenance". 2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.054123s. 2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ComputeQI2". 2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "ComputeQI2"  2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 0.263634s. 2025-10-09 22:52:09 | WARNING | nipype.workflow | Storing result file without outputs 2025-10-09 22:52:09 | WARNING | nipype.workflow | [Node] Error on "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" (/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/613ed6d8236b06ced679b89c4ef6be3ecd19998e/ComputeQI2) 2025-10-09 22:52:09 | ERROR | nipype.workflow | Node ComputeQI2.a0 (taskid=239) crashed: /var/lib/condor/execute/dir_3951177/ds/logs/crash-20251009-225209-fhoffstaedter-ComputeQI2.a0-ccc893ec-e275-429f-9ac6-62d1c3bb3111.txt get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/anat/sub-cIVs026_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/dwi/sub-cIVs026_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/dwi/sub-cIVs026_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-215_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/dwi/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/dwi/sub-cIVs026_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/dwi/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx1/dwi/sub-cIVs026_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/anat/sub-cIVs026_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/dwi/sub-cIVs026_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-107_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/dwi/sub-cIVs026_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-210_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/dwi/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-108_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/dwi/sub-cIVs026_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-211_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/dwi/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-106_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026/ses-s1Bx2/dwi/sub-cIVs026_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-209_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs026 (directory) get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...] run(error): /var/lib/condor/execute/dir_3951177/ds (dataset) [./code/containers/scripts/singularity_cm...] action summary: get (notneeded: 4, ok: 16) run (error: 1)