install(ok): /var/lib/condor/execute/dir_470370/ds (dataset) install(ok): /var/lib/condor/execute/dir_470370/ds/sourcedata/raw (dataset) [Installed subdataset in order to get /var/lib/condor/execute/dir_470370/ds/sourcedata/raw] ------------------------------------------------------------------ Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826 ---------------------------------------------------------------- NOTICE Copyright © The NiPreps Developers. This product includes software developed by the NiPreps Community (https://nipreps.org/). Portions of this software were developed at the Department of Psychology at Stanford University, Stanford, CA, US. This software contains code ultimately derived from the PCP Quality Assessment Protocol (QAP; http://preprocessed-connectomes-project.org/quality-assessment-protocol) by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman. This software is also distributed as a Docker container image. The bootstrapping file for the image ("Dockerfile") is licensed under the MIT License. ---------------------------------------------------------------- * BIDS dataset path: /var/lib/condor/execute/dir_470370/ds/sourcedata/raw. * Output folder: .. * Analysis levels: ['participant']. ------------------------------------------------------------------ 2025-10-09 21:54:44 | IMPORTANT | mriqc | Extracting metadata and entities for 2 input runs of modality 't1w'... 2025-10-09 21:54:44 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average]. 2025-10-09 21:54:44 | IMPORTANT | mriqc | Extracting metadata and entities for 12 input runs of modality 'dwi'... 2025-10-09 21:54:45 | WARNING | nipype.workflow | 4 cannot be processed (too short or too long) 2025-10-09 21:54:45 | IMPORTANT | mriqc | File size ('dwi'): 0.01|0.01 GB [maximum|average]. 2025-10-09 21:54:45 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-215443_16ef3bbe-4fcf-4162-b567-08c0eb9e6282.toml. 2025-10-09 21:54:49 | INFO | matplotlib.font_manager | generated new fontManager 2025-10-09 21:54:51 | IMPORTANT | mriqc | Building MRIQC's workflows... 2025-10-09 21:54:51 | INFO | nipype.workflow | Building diffusion MRIQC workflow for 8 NIfTI files.. 2025-10-09 21:54:52 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 2 NIfTI files.. 2025-10-09 21:54:57 | IMPORTANT | mriqc | Workflow building finished (exit code 0). 2025-10-09 21:55:01 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring'] 2025-10-09 21:55:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/conform". 2025-10-09 21:55:02 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:55:02 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.292776s. 2025-10-09 21:55:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/5a0672751933f24c4aadafbc60529dcdcb4c002f/conform". 2025-10-09 21:55:04 | INFO | nipype.workflow | [Node] Executing "conform"  2025-10-09 21:55:04 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.714828s. 2025-10-09 21:55:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/sanitize". 2025-10-09 21:55:06 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:06 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.87009s. 2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/provenance". 2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.022386s. 2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/load_bmat". 2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:08 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.188321s. 2025-10-09 21:55:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/sanitize". 2025-10-09 21:55:10 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:10 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.869675s. 2025-10-09 21:55:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/e806ab4868fe26e6df63dde6db6ae1931399ec12/provenance". 2025-10-09 21:55:12 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:12 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.021589s. 2025-10-09 21:55:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/load_bmat". 2025-10-09 21:55:12 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:12 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.026226s. 2025-10-09 21:55:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/sanitize". 2025-10-09 21:55:14 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:15 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.105446s. 2025-10-09 21:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/df55db65be4137e4b792b252f23058f4ccd14587/provenance". 2025-10-09 21:55:16 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:16 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.028135s. 2025-10-09 21:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/load_bmat". 2025-10-09 21:55:16 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:16 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.026369s. 2025-10-09 21:55:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/sanitize". 2025-10-09 21:55:18 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:19 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.088927s. 2025-10-09 21:55:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/121c9d0fb3c7ade02b2db29695cfed308d043617/provenance". 2025-10-09 21:55:20 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:20 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.026429s. 2025-10-09 21:55:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/load_bmat". 2025-10-09 21:55:20 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:20 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.049876s. 2025-10-09 21:55:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/sanitize". 2025-10-09 21:55:22 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:22 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.839552s. 2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/provenance". 2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.02092s. 2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/load_bmat". 2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:24 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.028079s. 2025-10-09 21:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/sanitize". 2025-10-09 21:55:26 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:26 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 0.847631s. 2025-10-09 21:55:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0e38172833aa34a5fd10f162c145e6a22a4593b4/provenance". 2025-10-09 21:55:28 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:28 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.020574s. 2025-10-09 21:55:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/load_bmat". 2025-10-09 21:55:28 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:28 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.027245s. 2025-10-09 21:55:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/sanitize". 2025-10-09 21:55:30 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:31 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.179414s. 2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/aa2ff1304b295349692279340b72d8542506d53f/provenance". 2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.026378s. 2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/load_bmat". 2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:32 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.025868s. 2025-10-09 21:55:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sanitize" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/sanitize". 2025-10-09 21:55:34 | INFO | nipype.workflow | [Node] Executing "sanitize"  2025-10-09 21:55:35 | INFO | nipype.workflow | [Node] Finished "sanitize", elapsed time 1.102763s. 2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5c0b6053646ee2d7054d91a83805b851b3eb4df4/provenance". 2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.027702s. 2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.load_bmat" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/load_bmat". 2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Executing "load_bmat"  2025-10-09 21:55:36 | INFO | nipype.workflow | [Node] Finished "load_bmat", elapsed time 0.026289s. 2025-10-09 21:55:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/pre_clip". 2025-10-09 21:55:38 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:55:48 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 10.083894s. 2025-10-09 21:55:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/RotationMask". 2025-10-09 21:55:50 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:55:51 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.953932s. 2025-10-09 21:55:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/PlotMosaicNoise". 2025-10-09 21:55:52 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:55:57 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.594576s. 2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/pre_clip". 2025-10-09 21:55:58 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 21:56:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.421507s. 2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/5a0672751933f24c4aadafbc60529dcdcb4c002f/RotationMask". 2025-10-09 21:56:10 | INFO | nipype.workflow | [Node] Executing "RotationMask"  2025-10-09 21:56:11 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 1.003763s. 2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/PlotMosaicNoise". 2025-10-09 21:56:12 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise"  2025-10-09 21:56:17 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.891312s. 2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/piesno". 2025-10-09 21:56:20 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:21 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.061888s. 2025-10-09 21:56:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/shells". 2025-10-09 21:56:22 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:22 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000802s. 2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/piesno". 2025-10-09 21:56:24 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:25 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.029888s. 2025-10-09 21:56:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/shells". 2025-10-09 21:56:26 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:26 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00087s. 2025-10-09 21:56:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/piesno". 2025-10-09 21:56:28 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:29 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.292495s. 2025-10-09 21:56:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/shells". 2025-10-09 21:56:30 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:30 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000794s. 2025-10-09 21:56:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/piesno". 2025-10-09 21:56:32 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:33 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.282551s. 2025-10-09 21:56:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/shells". 2025-10-09 21:56:34 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:34 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000704s. 2025-10-09 21:56:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/piesno". 2025-10-09 21:56:36 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:37 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 0.983267s. 2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/shells". 2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:38 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000814s. 2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/piesno". 2025-10-09 21:56:40 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:41 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.047887s. 2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/shells". 2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:42 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000684s. 2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/piesno". 2025-10-09 21:56:44 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:45 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.249101s. 2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/shells". 2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:46 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.00071s. 2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.piesno" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/piesno". 2025-10-09 21:56:48 | INFO | nipype.workflow | [Node] Executing "piesno"  2025-10-09 21:56:49 | INFO | nipype.workflow | [Node] Finished "piesno", elapsed time 1.35465s. 2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.shells" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/shells". 2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Executing "shells"  2025-10-09 21:56:50 | INFO | nipype.workflow | [Node] Finished "shells", elapsed time 0.000733s. 2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/pre_n4". 2025-10-09 21:56:52 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 21:59:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 129.516232s. 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ds_report_background". 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008309s. 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/pre_n4". 2025-10-09 21:59:04 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:01:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 136.426235s. 2025-10-09 22:01:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/ds_report_background". 2025-10-09 22:01:22 | INFO | nipype.workflow | [Node] Executing "ds_report_background"  2025-10-09 22:01:22 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.005527s. 2025-10-09 22:01:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/dwi_ref". 2025-10-09 22:01:22 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:23 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.325587s. 2025-10-09 22:01:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/get_lowb". 2025-10-09 22:01:24 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:24 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.638237s. 2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/dwi_ref". 2025-10-09 22:01:26 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:27 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.378279s. 2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/get_lowb". 2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:28 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.389885s. 2025-10-09 22:01:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/dwi_ref". 2025-10-09 22:01:30 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:32 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.769201s. 2025-10-09 22:01:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/get_lowb". 2025-10-09 22:01:32 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:33 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.697561s. 2025-10-09 22:01:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/dwi_ref". 2025-10-09 22:01:34 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:36 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 2.381785s. 2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/get_lowb". 2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:38 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.51784s. 2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/dwi_ref". 2025-10-09 22:01:40 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:42 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.9056959999999998s. 2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/get_lowb". 2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:44 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.652896s. 2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/dwi_ref". 2025-10-09 22:01:46 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:47 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.827255s. 2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/get_lowb". 2025-10-09 22:01:48 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:49 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 0.841003s. 2025-10-09 22:01:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/dwi_ref". 2025-10-09 22:01:50 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:51 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 1.547999s. 2025-10-09 22:01:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/get_lowb". 2025-10-09 22:01:52 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:53 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 1.420809s. 2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_ref" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/dwi_ref". 2025-10-09 22:01:54 | INFO | nipype.workflow | [Node] Executing "dwi_ref"  2025-10-09 22:01:55 | INFO | nipype.workflow | [Node] Finished "dwi_ref", elapsed time 0.781975s. 2025-10-09 22:01:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.get_lowb" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/get_lowb". 2025-10-09 22:01:56 | INFO | nipype.workflow | [Node] Executing "get_lowb"  2025-10-09 22:01:58 | INFO | nipype.workflow | [Node] Finished "get_lowb", elapsed time 2.420697s. 2025-10-09 22:02:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/synthstrip". 2025-10-09 22:02:00 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:03:44 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 103.770752s. 2025-10-09 22:03:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/synthstrip". 2025-10-09 22:03:44 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:05:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 92.641153s. 2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/pre_clip". 2025-10-09 22:05:18 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:05:19 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.680982s. 2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/SharpenEPI". 2025-10-09 22:05:20 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:05:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.966934s. 2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/hmc_b0". 2025-10-09 22:05:30 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:05:52 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.030302s. 2025-10-09 22:05:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/pre_clip". 2025-10-09 22:05:54 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:05:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.725008s. 2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/SharpenEPI". 2025-10-09 22:05:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:06:04 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.070971s. 2025-10-09 22:06:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/hmc_b0". 2025-10-09 22:06:06 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:06:28 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.149073s. 2025-10-09 22:06:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/pre_clip". 2025-10-09 22:06:30 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:06:31 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.74706s. 2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/SharpenEPI". 2025-10-09 22:06:32 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:06:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.819552s. 2025-10-09 22:06:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/hmc_b0". 2025-10-09 22:06:40 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:07:08 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.556347s. 2025-10-09 22:07:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/pre_clip". 2025-10-09 22:07:08 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:07:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.709465s. 2025-10-09 22:07:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/SharpenEPI". 2025-10-09 22:07:10 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:07:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 7.981637s. 2025-10-09 22:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/hmc_b0". 2025-10-09 22:07:20 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:07:48 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 27.947417s. 2025-10-09 22:07:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/pre_clip". 2025-10-09 22:07:50 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:07:51 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.671661s. 2025-10-09 22:07:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/SharpenEPI". 2025-10-09 22:07:52 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:08:00 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.008237s. 2025-10-09 22:08:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/hmc_b0". 2025-10-09 22:08:02 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:08:24 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.351793s. 2025-10-09 22:08:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/pre_clip". 2025-10-09 22:08:26 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:08:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.722965s. 2025-10-09 22:08:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/SharpenEPI". 2025-10-09 22:08:28 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:08:36 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.375474s. 2025-10-09 22:08:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/hmc_b0". 2025-10-09 22:08:38 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:09:01 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 22.859717s. 2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/pre_clip". 2025-10-09 22:09:02 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:09:03 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.776651s. 2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/SharpenEPI". 2025-10-09 22:09:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:09:12 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.162877s. 2025-10-09 22:09:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/hmc_b0". 2025-10-09 22:09:14 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:09:44 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 29.512636s. 2025-10-09 22:09:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/pre_clip". 2025-10-09 22:09:44 | INFO | nipype.workflow | [Node] Executing "pre_clip"  2025-10-09 22:09:45 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.710554s. 2025-10-09 22:09:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/SharpenEPI". 2025-10-09 22:09:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI"  2025-10-09 22:09:54 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 8.270936s. 2025-10-09 22:09:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.hmc_b0" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/hmc_b0". 2025-10-09 22:09:56 | INFO | nipype.workflow | [Node] Executing "hmc_b0"  2025-10-09 22:10:25 | INFO | nipype.workflow | [Node] Finished "hmc_b0", elapsed time 29.273989s. 2025-10-09 22:10:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/post_n4". 2025-10-09 22:10:26 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:10:57 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 30.738695s. 2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/smoothness". 2025-10-09 22:10:58 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:11:04 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.891285s. 2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/PlotMosaicZoomed". 2025-10-09 22:11:06 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:11:12 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.598923s. 2025-10-09 22:11:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/PlotBrainmask". 2025-10-09 22:11:12 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:11:16 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.343304s. 2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/post_n4". 2025-10-09 22:11:18 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:11:49 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 31.017866s. 2025-10-09 22:11:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5a0672751933f24c4aadafbc60529dcdcb4c002f/smoothness". 2025-10-09 22:11:50 | INFO | nipype.workflow | [Node] Executing "smoothness"  2025-10-09 22:11:56 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 5.963109s. 2025-10-09 22:11:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/PlotMosaicZoomed". 2025-10-09 22:11:58 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed"  2025-10-09 22:12:04 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 5.702272s. 2025-10-09 22:12:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/PlotBrainmask". 2025-10-09 22:12:04 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask"  2025-10-09 22:12:08 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 4.312551s. 2025-10-09 22:12:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/pre_n4". 2025-10-09 22:12:10 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:12:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.354626s. 2025-10-09 22:12:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/pre_n4". 2025-10-09 22:12:20 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:12:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.062301s. 2025-10-09 22:12:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/pre_n4". 2025-10-09 22:12:30 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:12:38 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.213772s. 2025-10-09 22:12:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/pre_n4". 2025-10-09 22:12:40 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:12:48 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.289691s. 2025-10-09 22:12:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/pre_n4". 2025-10-09 22:12:50 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:12:58 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.267929s. 2025-10-09 22:13:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/pre_n4". 2025-10-09 22:13:00 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:13:08 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.031236s. 2025-10-09 22:13:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/pre_n4". 2025-10-09 22:13:10 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:13:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 7.998355s. 2025-10-09 22:13:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/pre_n4". 2025-10-09 22:13:20 | INFO | nipype.workflow | [Node] Executing "pre_n4"  2025-10-09 22:13:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 8.046481s. 2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/final_masked". 2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:13:30 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.334946s. 2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization". 2025-10-09 22:13:32 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:13:33 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:14:55 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:14:55 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:15:13 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:15:15 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:15:15 | INFO | niworkflows | Generating visual report 2025-10-09 22:15:35 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 122.466282s. 2025-10-09 22:15:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ds_report_zoomed". 2025-10-09 22:15:36 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:15:36 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005538s. 2025-10-09 22:15:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ds_report_bmask". 2025-10-09 22:15:36 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:15:36 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005075s. 2025-10-09 22:15:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/final_masked". 2025-10-09 22:15:37 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:15:37 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.329911s. 2025-10-09 22:15:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization". 2025-10-09 22:15:38 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization"  2025-10-09 22:15:39 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:17:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json. 2025-10-09 22:17:00 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:17:18 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:17:20 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5a0672751933f24c4aadafbc60529dcdcb4c002f/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images 2025-10-09 22:17:20 | INFO | niworkflows | Generating visual report 2025-10-09 22:17:40 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 121.949868s. 2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/ds_report_zoomed". 2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed"  2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005534s. 2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/ds_report_bmask". 2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask"  2025-10-09 22:17:42 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005308s. 2025-10-09 22:17:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/synthstrip". 2025-10-09 22:17:43 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:18:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.515112s. 2025-10-09 22:18:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/synthstrip". 2025-10-09 22:18:36 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:19:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 53.362948s. 2025-10-09 22:19:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/synthstrip". 2025-10-09 22:19:30 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:20:23 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 53.006678s. 2025-10-09 22:20:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/synthstrip". 2025-10-09 22:20:24 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:21:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.7418s. 2025-10-09 22:21:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/synthstrip". 2025-10-09 22:21:18 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:22:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 65.404211s. 2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/synthstrip". 2025-10-09 22:22:25 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:23:29 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 64.076011s. 2025-10-09 22:23:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/synthstrip". 2025-10-09 22:23:31 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:24:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 63.691641s. 2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/synthstrip". 2025-10-09 22:24:35 | INFO | nipype.workflow | [Node] Executing "synthstrip"  2025-10-09 22:25:38 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 63.105476s. 2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ds_report_norm". 2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005592s. 2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5a0672751933f24c4aadafbc60529dcdcb4c002f/ds_report_norm". 2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Executing "ds_report_norm"  2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005545s. 2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/post_n4". 2025-10-09 22:25:39 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:25:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.666093s. 2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/sp_mask". 2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:25:43 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.646414s. 2025-10-09 22:25:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/drift". 2025-10-09 22:25:45 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:25:45 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9977, 0.9961, 1.0004, 0.9977, 0.997, 0.9989. 2025-10-09 22:25:46 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.725689s. 2025-10-09 22:25:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/EPI2MNI". 2025-10-09 22:25:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:25:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:26:17 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/EPI2MNI/stderr.nipype-init). 2025-10-09 22:26:17 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:26:17 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:27:31 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:27:31 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:27:31 | INFO | niworkflows | Generating visual report 2025-10-09 22:27:50 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 123.660596s. 2025-10-09 22:27:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/post_n4". 2025-10-09 22:27:51 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:27:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.606841s. 2025-10-09 22:27:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/sp_mask". 2025-10-09 22:27:55 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:27:56 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.698595s. 2025-10-09 22:27:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/drift". 2025-10-09 22:27:57 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:27:57 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0005, 0.9969, 1.0002, 0.9977, 0.9974, 0.9993. 2025-10-09 22:27:59 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.742363s. 2025-10-09 22:27:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/EPI2MNI". 2025-10-09 22:27:59 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:27:59 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:28:34 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/EPI2MNI/stderr.nipype-init). 2025-10-09 22:28:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:28:34 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:29:53 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:29:53 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:29:53 | INFO | niworkflows | Generating visual report 2025-10-09 22:30:12 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 133.63738s. 2025-10-09 22:30:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/post_n4". 2025-10-09 22:30:13 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:30:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.6126300000000002s. 2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/sp_mask". 2025-10-09 22:30:17 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:30:18 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.942277s. 2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/drift". 2025-10-09 22:30:19 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:30:19 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9917, 0.9947, 0.9989, 0.9943, 0.9924, 0.9912, 0.9904, 0.9868. 2025-10-09 22:30:21 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.097466s. 2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/EPI2MNI". 2025-10-09 22:30:23 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:30:23 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:30:56 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/EPI2MNI/stderr.nipype-init). 2025-10-09 22:30:56 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:30:56 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:32:08 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:32:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:32:08 | INFO | niworkflows | Generating visual report 2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 123.771055s. 2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/post_n4". 2025-10-09 22:32:27 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:32:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.6551970000000003s. 2025-10-09 22:32:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/sp_mask". 2025-10-09 22:32:31 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:32:32 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.985101s. 2025-10-09 22:32:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/drift". 2025-10-09 22:32:33 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:32:33 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9988, 0.9944, 0.9971, 0.9992, 0.994, 0.9938, 0.994, 0.9973. 2025-10-09 22:32:35 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.146713s. 2025-10-09 22:32:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/EPI2MNI". 2025-10-09 22:32:37 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:32:37 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:33:10 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/EPI2MNI/stderr.nipype-init). 2025-10-09 22:33:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:33:10 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/SharpenEPI/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:34:24 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:34:24 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:34:24 | INFO | niworkflows | Generating visual report 2025-10-09 22:34:44 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.625093s. 2025-10-09 22:34:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/post_n4". 2025-10-09 22:34:45 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:34:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.714248s. 2025-10-09 22:34:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/sp_mask". 2025-10-09 22:34:49 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:34:50 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.641297s. 2025-10-09 22:34:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/drift". 2025-10-09 22:34:51 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:34:51 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 1.0058, 1.0036, 1.009, 1.0058, 1.0, 1.0026. 2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.684258s. 2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/EPI2MNI". 2025-10-09 22:34:53 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:34:53 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:35:25 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:35:25 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:36:41 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:36:41 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:36:41 | INFO | niworkflows | Generating visual report 2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 127.188445s. 2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/post_n4". 2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.610778s. 2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/sp_mask". 2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.667485s. 2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/drift". 2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:37:07 | INFO | nipype.interface | Correcting drift with 7 b=0 volumes, with global signal estimated at 1.0, 0.9754, 0.9946, 0.9979, 0.992, 0.985, 0.9816. 2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 1.693823s. 2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/EPI2MNI". 2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:37:09 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:37:42 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/EPI2MNI/stderr.nipype-init). 2025-10-09 22:37:42 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:37:42 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:38:58 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:38:58 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:38:58 | INFO | niworkflows | Generating visual report 2025-10-09 22:39:17 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 127.82922s. 2025-10-09 22:39:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/post_n4". 2025-10-09 22:39:17 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:39:20 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.667398s. 2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/sp_mask". 2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 1.0217s. 2025-10-09 22:39:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/drift". 2025-10-09 22:39:23 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:39:23 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9949, 0.9839, 0.9931, 0.9935, 0.9861, 0.9796, 0.9799, 0.994. 2025-10-09 22:39:25 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.149836s. 2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/EPI2MNI". 2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:39:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:40:00 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/EPI2MNI/stderr.nipype-init). 2025-10-09 22:40:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:40:00 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:41:17 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:41:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:41:17 | INFO | niworkflows | Generating visual report 2025-10-09 22:41:36 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.563219s. 2025-10-09 22:41:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/post_n4". 2025-10-09 22:41:37 | INFO | nipype.workflow | [Node] Executing "post_n4"  2025-10-09 22:41:40 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 2.627179s. 2025-10-09 22:41:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.sp_mask" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/sp_mask". 2025-10-09 22:41:41 | INFO | nipype.workflow | [Node] Executing "sp_mask"  2025-10-09 22:41:42 | INFO | nipype.workflow | [Node] Finished "sp_mask", elapsed time 0.978279s. 2025-10-09 22:41:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.drift" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/drift". 2025-10-09 22:41:43 | INFO | nipype.workflow | [Node] Executing "drift"  2025-10-09 22:41:44 | INFO | nipype.interface | Correcting drift with 9 b=0 volumes, with global signal estimated at 1.0, 0.9987, 0.9799, 0.9795, 0.9978, 0.998, 0.9917, 0.9906, 0.9988. 2025-10-09 22:41:45 | INFO | nipype.workflow | [Node] Finished "drift", elapsed time 2.20177s. 2025-10-09 22:41:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/EPI2MNI". 2025-10-09 22:41:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI"  2025-10-09 22:41:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer 2025-10-09 22:42:21 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/EPI2MNI/stderr.nipype-init). 2025-10-09 22:42:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json. 2025-10-09 22:42:21 | INFO | niworkflows | Retry #1, commandline: antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/SharpenEPI/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi_valid_average_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1 2025-10-09 22:43:36 | INFO | niworkflows | Successful spatial normalization (retry #1). 2025-10-09 22:43:36 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/EPI2MNI/epi_to_mni_Warped.nii.gz) images 2025-10-09 22:43:36 | INFO | niworkflows | Generating visual report 2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 128.184423s. 2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/final_masked". 2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:43:57 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.036069s. 2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/dwidenoise". 2025-10-09 22:43:59 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:44:22 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 23.107437s. 2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/ResampleSegmentation". 2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:44:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.064143s. 2025-10-09 22:44:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/final_masked". 2025-10-09 22:44:29 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:44:29 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038118s. 2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/dwidenoise". 2025-10-09 22:44:31 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 22.783729s. 2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/e806ab4868fe26e6df63dde6db6ae1931399ec12/ResampleSegmentation". 2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.093111s. 2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/df55db65be4137e4b792b252f23058f4ccd14587/final_masked". 2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038039s. 2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/dwidenoise". 2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 41.48046s. 2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/df55db65be4137e4b792b252f23058f4ccd14587/ResampleSegmentation". 2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:45:49 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.074425s. 2025-10-09 22:45:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/final_masked". 2025-10-09 22:45:51 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:45:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038517s. 2025-10-09 22:45:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/dwidenoise". 2025-10-09 22:45:53 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:46:34 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 40.811557s. 2025-10-09 22:46:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/121c9d0fb3c7ade02b2db29695cfed308d043617/ResampleSegmentation". 2025-10-09 22:46:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:46:39 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 4.025191s. 2025-10-09 22:46:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/final_masked". 2025-10-09 22:46:41 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:46:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.038666s. 2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/dwidenoise". 2025-10-09 22:46:43 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 22.131831s. 2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/ResampleSegmentation". 2025-10-09 22:47:07 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:47:11 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.907231s. 2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/final_masked". 2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:47:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.053851s. 2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/dwidenoise". 2025-10-09 22:47:15 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:47:38 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 22.228725s. 2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/0e38172833aa34a5fd10f162c145e6a22a4593b4/ResampleSegmentation". 2025-10-09 22:47:39 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.778434s. 2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/aa2ff1304b295349692279340b72d8542506d53f/final_masked". 2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.037909s. 2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/dwidenoise". 2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 39.737713s. 2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/aa2ff1304b295349692279340b72d8542506d53f/ResampleSegmentation". 2025-10-09 22:48:25 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:48:29 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.963569s. 2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/dwiMRIQC/synthstrip_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/final_masked". 2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Executing "final_masked"  2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.035947s. 2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwidenoise" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/dwidenoise". 2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Executing "dwidenoise"  2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Finished "dwidenoise", elapsed time 38.714699s. 2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/dwiMRIQC/SpatialNormalization/5c0b6053646ee2d7054d91a83805b851b3eb4df4/ResampleSegmentation". 2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation"  2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 3.58522s. 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/dwimodel". 2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.892386s. 2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/estimate_sigma". 2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.038561s. 2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/get_wm". 2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.063539s. 2025-10-09 22:49:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/dwimodel". 2025-10-09 22:49:27 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:49:31 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.971658s. 2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/e806ab4868fe26e6df63dde6db6ae1931399ec12/estimate_sigma". 2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.03829s. 2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/get_wm". 2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.036152s. 2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/dwimodel". 2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.273864s. 2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/df55db65be4137e4b792b252f23058f4ccd14587/estimate_sigma". 2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.039039s. 2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/get_wm". 2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.036919s. 2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/dwimodel". 2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.273218s. 2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/121c9d0fb3c7ade02b2db29695cfed308d043617/estimate_sigma". 2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.037703s. 2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/get_wm". 2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.037273s. 2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/dwimodel". 2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.863601s. 2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/estimate_sigma". 2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.039661s. 2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/get_wm". 2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.037079s. 2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/dwimodel". 2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 3.822477s. 2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/0e38172833aa34a5fd10f162c145e6a22a4593b4/estimate_sigma". 2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.038344s. 2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/get_wm". 2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.03781s. 2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/dwimodel". 2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.323991s. 2025-10-09 22:50:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/aa2ff1304b295349692279340b72d8542506d53f/estimate_sigma". 2025-10-09 22:50:19 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:50:19 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.038258s. 2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/get_wm". 2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.035601s. 2025-10-09 22:50:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwimodel" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/dwimodel". 2025-10-09 22:50:23 | INFO | nipype.workflow | [Node] Executing "dwimodel"  2025-10-09 22:50:28 | INFO | nipype.workflow | [Node] Finished "dwimodel", elapsed time 4.311293s. 2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.ComputeIQMs.estimate_sigma" in "/tmp/mriqc_wf/dwiMRIQC/ComputeIQMs/5c0b6053646ee2d7054d91a83805b851b3eb4df4/estimate_sigma". 2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Executing "estimate_sigma"  2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Finished "estimate_sigma", elapsed time 0.037288s. 2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.get_wm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/get_wm". 2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Executing "get_wm"  2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Finished "get_wm", elapsed time 0.034862s. 2025-10-09 22:50:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/cc_mask". 2025-10-09 22:50:33 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.532065s. 2025-10-09 22:50:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/mosaic_fa". 2025-10-09 22:50:35 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.326907s. 2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/mosaic_md". 2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.408264s. 2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/plot_heatmap". 2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.487036s. 2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/e806ab4868fe26e6df63dde6db6ae1931399ec12/cc_mask". 2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:50:42 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.50675s. 2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/mosaic_fa". 2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.4293339999999999s. 2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/mosaic_md". 2025-10-09 22:50:45 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.668844s. 2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/plot_heatmap". 2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.166259s. 2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/df55db65be4137e4b792b252f23058f4ccd14587/cc_mask". 2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:50:50 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.517941s. 2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/mosaic_fa". 2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.453527s. 2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/mosaic_md". 2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.6657220000000001s. 2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/plot_heatmap". 2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:50:57 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.266029s. 2025-10-09 22:50:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/121c9d0fb3c7ade02b2db29695cfed308d043617/cc_mask". 2025-10-09 22:50:57 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:50:58 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.508387s. 2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/mosaic_fa". 2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.509572s. 2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/mosaic_md". 2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.5804390000000001s. 2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/plot_heatmap". 2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.223294s. 2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/cc_mask". 2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:51:06 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.497133s. 2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/mosaic_fa". 2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.499647s. 2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/mosaic_md". 2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:51:11 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.70485s. 2025-10-09 22:51:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/plot_heatmap". 2025-10-09 22:51:11 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:51:13 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.156316s. 2025-10-09 22:51:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/0e38172833aa34a5fd10f162c145e6a22a4593b4/cc_mask". 2025-10-09 22:51:13 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.525909s. 2025-10-09 22:51:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/mosaic_fa". 2025-10-09 22:51:15 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.536118s. 2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/mosaic_md". 2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.405257s. 2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/plot_heatmap". 2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.3948450000000001s. 2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/aa2ff1304b295349692279340b72d8542506d53f/cc_mask". 2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.505929s. 2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/mosaic_fa". 2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.376711s. 2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/mosaic_md". 2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.7170260000000002s. 2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/plot_heatmap". 2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.246022s. 2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.cc_mask" in "/tmp/mriqc_wf/dwiMRIQC/5c0b6053646ee2d7054d91a83805b851b3eb4df4/cc_mask". 2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "cc_mask"  2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "cc_mask", elapsed time 0.508896s. 2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/mosaic_fa". 2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Executing "mosaic_fa"  2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Finished "mosaic_fa", elapsed time 1.447119s. 2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.mosaic_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/mosaic_md". 2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Executing "mosaic_md"  2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Finished "mosaic_md", elapsed time 1.485883s. 2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.plot_heatmap" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/plot_heatmap". 2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Executing "plot_heatmap"  2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "plot_heatmap", elapsed time 1.2087729999999999s. 2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/ds_report_fa". 2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004885s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/ds_report_md". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004868s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/1a23fa468bf1f288a6490eff39a7e08cd2ab15dc/ds_report_hm". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.007872s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/ds_report_fa". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004706s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/ds_report_md". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004712s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/e806ab4868fe26e6df63dde6db6ae1931399ec12/ds_report_hm". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004678s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/ds_report_fa". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004649s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/ds_report_md". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004851s. 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/df55db65be4137e4b792b252f23058f4ccd14587/ds_report_hm". 2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004672s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/ds_report_fa". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004677s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/ds_report_md". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004723s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/121c9d0fb3c7ade02b2db29695cfed308d043617/ds_report_hm". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004934s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/ds_report_fa". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.005418s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/ds_report_md". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005577s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/24df4c8f28df8a1ae08e086bafb0aa0da0c0d00a/ds_report_hm". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004705s. 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/ds_report_fa". 2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004828s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/ds_report_md". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004751s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/0e38172833aa34a5fd10f162c145e6a22a4593b4/ds_report_hm". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.005006s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/ds_report_fa". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004844s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/ds_report_md". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.005133s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/aa2ff1304b295349692279340b72d8542506d53f/ds_report_hm". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004632s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_fa" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/ds_report_fa". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_fa"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_fa", elapsed time 0.004795s. 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_md" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/ds_report_md". 2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "ds_report_md"  2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "ds_report_md", elapsed time 0.004656s. 2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.dwiMRIQC.dwi_report_wf.ds_report_hm" in "/tmp/mriqc_wf/dwiMRIQC/dwi_report_wf/5c0b6053646ee2d7054d91a83805b851b3eb4df4/ds_report_hm". 2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Executing "ds_report_hm"  2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "ds_report_hm", elapsed time 0.004725s. 2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0"  2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 9.265891s. 2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1"  2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 9.076667s. 2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2"  2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 8.993657s. 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/tpms_std2t1w/mapflow/_tpms_std2t1w0". 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached. 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/tpms_std2t1w/mapflow/_tpms_std2t1w1". 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached. 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/tpms_std2t1w/mapflow/_tpms_std2t1w2". 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs 2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached. 2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/Enhance". 2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Executing "Enhance"  2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.610314s. 2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/format_tpm_names". 2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Executing "format_tpm_names"  2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.8393929999999998s. 2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/Grad". 2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Executing "Grad"  2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 6.5326260000000005s. 2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/apply_mask". 2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Executing "apply_mask"  2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.28115s. 2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/GradientThreshold". 2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Executing "GradientThreshold"  2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 13.506769s. 2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/segmentation". 2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Executing "segmentation"  2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 93.950728s. 2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ArtifactMask". 2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Executing "ArtifactMask"  2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 6.320544s. 2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/PlotHeadmask". 2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask"  2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 3.055802s. 2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/harmonize". 2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Executing "harmonize"  2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 1.004463s. 2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/PlotSegmentation". 2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation"  2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.55602s. 2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/provenance". 2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Executing "provenance"  2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.060453s. 2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ComputeQI2". 2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Executing "ComputeQI2"  2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 0.262043s. 2025-10-09 22:54:35 | WARNING | nipype.workflow | Storing result file without outputs 2025-10-09 22:54:35 | WARNING | nipype.workflow | [Node] Error on "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" (/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/57e8f371c0e265d5d5b13f76c1b5ababc8ee1309/ComputeQI2) 2025-10-09 22:54:35 | ERROR | nipype.workflow | Node ComputeQI2.a0 (taskid=239) crashed: /var/lib/condor/execute/dir_470370/ds/logs/crash-20251009-225435-fhoffstaedter-ComputeQI2.a0-e7d9f8c7-21af-40c8-94a8-396d49549b0b.txt get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/anat/sub-cIVs018_ses-s1Bx1_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/dwi/sub-cIVs018_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-112_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/dwi/sub-cIVs018_ses-s1Bx1_acq-b1000n3r21x21x22peAPA_run-215_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/dwi/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-113_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/dwi/sub-cIVs018_ses-s1Bx1_acq-b1000n40r21x21x22peAPP_run-216_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/dwi/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-111_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx1/dwi/sub-cIVs018_ses-s1Bx1_acq-b2000n56r21x21x22peAPP_run-214_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/anat/sub-cIVs018_ses-s1Bx2_acq-r10x10x10_T1w.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/dwi/sub-cIVs018_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-113_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/dwi/sub-cIVs018_ses-s1Bx2_acq-b1000n3r21x21x22peAPA_run-216_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/dwi/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-114_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/dwi/sub-cIVs018_ses-s1Bx2_acq-b1000n40r21x21x22peAPP_run-217_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/dwi/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-112_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018/ses-s1Bx2/dwi/sub-cIVs018_ses-s1Bx2_acq-b2000n56r21x21x22peAPP_run-215_dwi.nii.gz (file) [from s3-PUBLIC...] get(ok): sourcedata/raw/sub-cIVs018 (directory) get(ok): code/containers/images/bids/bids-mriqc--24.0.2.sing (file) [from datasets.datalad.org...] run(error): /var/lib/condor/execute/dir_470370/ds (dataset) [./code/containers/scripts/singularity_cm...] action summary: get (notneeded: 4, ok: 16) run (error: 1)