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ds000007-mriqc/logs/duct/sub-20_2025.10.10T00.36.29-3967423_stdout
Felix Hoffstaedter de5257c0dc [DATALAD RUNCMD] Compute MRIQC for sub-20 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-20 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-20",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:13:26 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3964011/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:30 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:30 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:30 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:31 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:31 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223629_6d739b47-c723-4004-a2d1-2819c91b80c4.toml.
2025-10-09 22:36:34 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:35 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:36 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:36 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:40 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:44 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/bcafde08919b2acb70e5cb779c1719da70ec93ad/conform".
2025-10-09 22:36:44 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:44 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.404353s.
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/pick_echo".
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000244s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/provenance/mapflow/_provenance0".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045382s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f28f726793917379ac8cd63f6bb34bfba75a492e/pick_echo".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000123s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/provenance/mapflow/_provenance0".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045467s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/pick_echo".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000123s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/provenance/mapflow/_provenance0".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045674s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/3d8e29a6411873663e39968ed43bf61075a72c46/pick_echo".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/provenance/mapflow/_provenance0".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045498s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/pick_echo".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000116s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/provenance/mapflow/_provenance0".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045788s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5aff919d3ea15d6deb19859f997b7a3803c2910b/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000112s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046096s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/pre_clip".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.013437s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/bcafde08919b2acb70e5cb779c1719da70ec93ad/RotationMask".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.433981s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotMosaicNoise".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:14 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.0079s.
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/non_steady_state_detector".
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159156s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f28f726793917379ac8cd63f6bb34bfba75a492e/non_steady_state_detector".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.157591s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/non_steady_state_detector".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.157681s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/3d8e29a6411873663e39968ed43bf61075a72c46/non_steady_state_detector".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.158523s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/non_steady_state_detector".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159373s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5aff919d3ea15d6deb19859f997b7a3803c2910b/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.158637s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/pre_n4".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 52.01997s.
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_background".
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007038s.
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033798s.
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f28f726793917379ac8cd63f6bb34bfba75a492e/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033818s.
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033967s.
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/3d8e29a6411873663e39968ed43bf61075a72c46/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.137511s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.038979s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5aff919d3ea15d6deb19859f997b7a3803c2910b/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033882s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/synthstrip".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:13 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.009863s.
2025-10-09 22:39:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/estimate_hm".
2025-10-09 22:39:14 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.763335s.
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:05 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.2768709999999999s.
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f28f726793917379ac8cd63f6bb34bfba75a492e/estimate_hm".
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:55 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 108.733798s.
2025-10-09 22:42:56 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:56 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:57 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.261648s.
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/estimate_hm".
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:51 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.11061s.
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.28803s.
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3d8e29a6411873663e39968ed43bf61075a72c46/estimate_hm".
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.355132s.
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.263684s.
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/estimate_hm".
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.461359s.
2025-10-09 22:48:38 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:38 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.284162s.
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5aff919d3ea15d6deb19859f997b7a3803c2910b/estimate_hm".
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.548015s.
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.266912s.
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/post_n4".
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 12.229563s.
2025-10-09 22:50:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bcafde08919b2acb70e5cb779c1719da70ec93ad/smoothness".
2025-10-09 22:50:48 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.451172s.
2025-10-09 22:50:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotMosaicZoomed".
2025-10-09 22:50:52 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:50:56 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.2458460000000002s.
2025-10-09 22:50:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotBrainmask".
2025-10-09 22:50:56 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.38514s.
2025-10-09 22:51:00 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:00 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.345203s.
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ComputeFD".
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004738s.
2025-10-09 22:51:12 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:12 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:13 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.362607s.
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f28f726793917379ac8cd63f6bb34bfba75a492e/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.327303s.
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f28f726793917379ac8cd63f6bb34bfba75a492e/ComputeFD".
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.0043s.
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.364647s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.429957s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ComputeFD".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005415s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.364735s.
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3d8e29a6411873663e39968ed43bf61075a72c46/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.401848s.
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3d8e29a6411873663e39968ed43bf61075a72c46/ComputeFD".
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005171s.
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:55 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.372358s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.431782s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ComputeFD".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005346s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.386991s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5aff919d3ea15d6deb19859f997b7a3803c2910b/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.425039s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5aff919d3ea15d6deb19859f997b7a3803c2910b/ComputeFD".
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002226s.
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.392608s.
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/final_masked".
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.202933s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization".
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:52:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:53:14 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:53:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:53:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:53:25 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:53:26 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:53:26 | INFO | niworkflows | Generating visual report
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 73.326787s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_zoomed".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003925s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_bmask".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003773s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/mean/mapflow/_mean0".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.600275s.
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c72a1981bbb8fd625b5af45962b92ca8010f3af3/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.406779s.
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/quality/mapflow/_quality0".
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.250979s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f28f726793917379ac8cd63f6bb34bfba75a492e/mean/mapflow/_mean0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.540556s.
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f28f726793917379ac8cd63f6bb34bfba75a492e/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.409454s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/quality/mapflow/_quality0".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.228232s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/mean/mapflow/_mean0".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.545252s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.409338s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/quality/mapflow/_quality0".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.255321s.
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/3d8e29a6411873663e39968ed43bf61075a72c46/mean/mapflow/_mean0".
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.569789s.
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/3d8e29a6411873663e39968ed43bf61075a72c46/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.430455s.
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/quality/mapflow/_quality0".
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.231644s.
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/mean/mapflow/_mean0".
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.569835s.
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.40939s.
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/quality/mapflow/_quality0".
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.2372049999999999s.
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5aff919d3ea15d6deb19859f997b7a3803c2910b/mean/mapflow/_mean0".
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.545188s.
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5aff919d3ea15d6deb19859f997b7a3803c2910b/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.410045s.
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/quality/mapflow/_quality0".
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:16 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.2330969999999999s.
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_norm".
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003855s.
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/pre_clip".
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.217791s.
2025-10-09 22:54:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/SharpenEPI".
2025-10-09 22:54:19 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.444004s.
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.792252s.
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.834s.
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.848159s.
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/pre_clip".
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.242225s.
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/SharpenEPI".
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5121609999999999s.
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.818981s.
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.862961s.
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.870887s.
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/pre_clip".
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.228601s.
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/SharpenEPI".
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.507484s.
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.820391s.
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.867319s.
2025-10-09 22:54:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:45 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.875905s.
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/pre_clip".
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.231209s.
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/SharpenEPI".
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.502291s.
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.800731s.
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.847343s.
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.856804s.
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/pre_clip".
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.258387s.
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/SharpenEPI".
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5268199999999998s.
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.827106s.
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.873709s.
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.883469s.
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/pre_clip".
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.236425s.
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/SharpenEPI".
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.510184s.
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.833444s.
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.878246s.
2025-10-09 22:55:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.890865s.
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/pre_n4".
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4930430000000001s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00462s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004086s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.0041s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/pre_n4".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.439826s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004088s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004088s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004065s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/pre_n4".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.430796s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.012504s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004082s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004204s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/pre_n4".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4344540000000001s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004254s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004219s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00422s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/pre_n4".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.428156s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004192s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004207s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004201s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/pre_n4".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.426839s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004105s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004042s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004073s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/synthstrip".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:02 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.777001s.
2025-10-09 22:56:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/synthstrip".
2025-10-09 22:56:03 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.793643s.
2025-10-09 22:56:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/synthstrip".
2025-10-09 22:56:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.814922s.
2025-10-09 22:57:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/synthstrip".
2025-10-09 22:57:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:43 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.826306s.
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/synthstrip".
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.851639s.
2025-10-09 22:58:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/synthstrip".
2025-10-09 22:58:19 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.987013s.
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/post_n4".
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.676736s.
2025-10-09 22:58:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/EPI2MNI".
2025-10-09 22:58:55 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:58:55 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:15 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:15 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/SharpenEPI/sub-20_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/SharpenEPI/sub-20_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/SharpenEPI/sub-20_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:12 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:12 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:12 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:26 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.314516s.
2025-10-09 23:00:27 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:27 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:31 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.995785s.
2025-10-09 23:00:33 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:33 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:33 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.286485s.
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/outliers/mapflow/_outliers0".
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.770418s.
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/gcor/mapflow/_gcor0".
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.099808s.
2025-10-09 23:00:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/dilated_mask".
2025-10-09 23:00:39 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:39 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016053s.
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.816323s.
2025-10-09 23:00:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/PlotBrainmask".
2025-10-09 23:00:43 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.181288s.
2025-10-09 23:00:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/post_n4".
2025-10-09 23:00:45 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:00:45 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.702608s.
2025-10-09 23:00:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/EPI2MNI".
2025-10-09 23:00:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:00:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:06 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/EPI2MNI/stderr.nipype-init).
2025-10-09 23:01:06 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:06 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/SharpenEPI/sub-20_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/SharpenEPI/sub-20_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/SharpenEPI/sub-20_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:03 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:03 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:17 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.659586s.
2025-10-09 23:02:19 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:19 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:23 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.951816s.
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.26138s.
2025-10-09 23:02:27 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/outliers/mapflow/_outliers0".
2025-10-09 23:02:27 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:27 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.747175s.
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/gcor/mapflow/_gcor0".
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:30 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.006647s.
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/dilated_mask".
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016955s.
2025-10-09 23:02:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.793457s.
2025-10-09 23:02:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/PlotBrainmask".
2025-10-09 23:02:35 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.183683s.
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/post_n4".
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.708851s.
2025-10-09 23:02:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/EPI2MNI".
2025-10-09 23:02:39 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:39 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:02:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:02:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/SharpenEPI/sub-20_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/SharpenEPI/sub-20_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/SharpenEPI/sub-20_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:03:54 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:03:54 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:03:54 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:09 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.846382s.
2025-10-09 23:04:09 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:09 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:13 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.982463s.
2025-10-09 23:04:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:15 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.291285s.
2025-10-09 23:04:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/outliers/mapflow/_outliers0".
2025-10-09 23:04:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.754838s.
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/gcor/mapflow/_gcor0".
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:20 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.012305s.
2025-10-09 23:04:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/dilated_mask".
2025-10-09 23:04:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014676s.
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.803884s.
2025-10-09 23:04:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/PlotBrainmask".
2025-10-09 23:04:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.195951s.
2025-10-09 23:04:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/post_n4".
2025-10-09 23:04:27 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.714298s.
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/EPI2MNI".
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:04:48 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/EPI2MNI/stderr.nipype-init).
2025-10-09 23:04:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:04:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/SharpenEPI/sub-20_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/SharpenEPI/sub-20_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/SharpenEPI/sub-20_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:05:46 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:05:46 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:05:46 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:00 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.399468s.
2025-10-09 23:06:01 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:01 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:05 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.005377s.
2025-10-09 23:06:07 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:07 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:07 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.266695s.
2025-10-09 23:06:09 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/outliers/mapflow/_outliers0".
2025-10-09 23:06:09 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:10 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.729988s.
2025-10-09 23:06:11 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/gcor/mapflow/_gcor0".
2025-10-09 23:06:11 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.991306s.
2025-10-09 23:06:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/dilated_mask".
2025-10-09 23:06:13 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:13 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017471s.
2025-10-09 23:06:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.803814s.
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/PlotBrainmask".
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.185693s.
2025-10-09 23:06:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/post_n4".
2025-10-09 23:06:19 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.714509s.
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/EPI2MNI".
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:21 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:06:39 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:06:39 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/SharpenEPI/sub-20_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/SharpenEPI/sub-20_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/SharpenEPI/sub-20_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:37 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:37 | INFO | niworkflows | Generating visual report
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.859253s.
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.098131s.
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/smoothness/mapflow/_smoothness0".
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.249689s.
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/outliers/mapflow/_outliers0".
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.752722s.
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/gcor/mapflow/_gcor0".
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.015641s.
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/dilated_mask".
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016345s.
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.826003s.
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/PlotBrainmask".
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.20981s.
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/post_n4".
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.691711s.
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/EPI2MNI".
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:08:13 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:08:33 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/EPI2MNI/stderr.nipype-init).
2025-10-09 23:08:33 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:08:33 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/SharpenEPI/sub-20_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/SharpenEPI/sub-20_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/SharpenEPI/sub-20_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:09:29 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:09:29 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:09:29 | INFO | niworkflows | Generating visual report
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.655574s.
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.047983s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/smoothness/mapflow/_smoothness0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.264026s.
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/outliers/mapflow/_outliers0".
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.755746s.
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/gcor/mapflow/_gcor0".
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.014197s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/dilated_mask".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018889s.
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:10:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.829091s.
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/PlotBrainmask".
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.171311s.
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/final_masked".
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025016s.
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ResampleSegmentation".
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:06 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.953147s.
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_norm".
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004078s.
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/measures/mapflow/_measures0".
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.378631s.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019544s.
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/subtract_mask".
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015619s.
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004114s.
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_bmask".
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003972s.
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/final_masked".
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024918s.
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f28f726793917379ac8cd63f6bb34bfba75a492e/ResampleSegmentation".
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.874051s.
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_norm".
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003998s.
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/measures/mapflow/_measures0".
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.358538s.
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.012315s.
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/subtract_mask".
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010576s.
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004123s.
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_bmask".
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.012078s.
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/final_masked".
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023157s.
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ResampleSegmentation".
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.921185s.
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_norm".
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003979s.
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/measures/mapflow/_measures0".
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.384055s.
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014194s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/subtract_mask".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013096s.
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004009s.
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_bmask".
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004084s.
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3d8e29a6411873663e39968ed43bf61075a72c46/final_masked".
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024848s.
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3d8e29a6411873663e39968ed43bf61075a72c46/ResampleSegmentation".
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.922675s.
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_norm".
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004099s.
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/measures/mapflow/_measures0".
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.355268s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.007494s.
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/subtract_mask".
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014344s.
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00415s.
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_bmask".
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003968s.
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/final_masked".
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023065s.
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ResampleSegmentation".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.93949s.
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_norm".
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003969s.
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/measures/mapflow/_measures0".
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.35555s.
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016426s.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/subtract_mask".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012963s.
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004251s.
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_bmask".
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003983s.
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/final_masked".
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025219s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5aff919d3ea15d6deb19859f997b7a3803c2910b/ResampleSegmentation".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.935672s.
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_norm".
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004086s.
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/measures/mapflow/_measures0".
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.380171s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010367s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/subtract_mask".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013728s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00408s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_bmask".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003992s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/datasink/mapflow/_datasink0".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000502s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00352s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/parcels".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020564s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/datasink/mapflow/_datasink0".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000406s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003487s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/parcels".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020173s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/datasink/mapflow/_datasink0".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000405s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003658s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/parcels".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014463s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/datasink/mapflow/_datasink0".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000404s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3d8e29a6411873663e39968ed43bf61075a72c46/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003433s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/parcels".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016914s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/datasink/mapflow/_datasink0".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000402s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00341s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/parcels".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.011295s.
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/datasink/mapflow/_datasink0".
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000417s.
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003528s.
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/parcels".
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.013429s.
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.470458s.
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.465144s.
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.6006749999999998s.
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.441501s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:24 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.465294s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.675505s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c72a1981bbb8fd625b5af45962b92ca8010f3af3/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003991s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f28f726793917379ac8cd63f6bb34bfba75a492e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004024s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c7d6d1ec5f2bc8495e8f14167dd84b26b4999767/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003971s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3d8e29a6411873663e39968ed43bf61075a72c46/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004015s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/33e81d6ca846b3190ee0c014a29dbe3f1625aeba/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00402s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5aff919d3ea15d6deb19859f997b7a3803c2910b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003892s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:32 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.97866s.
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.025832s.
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.00612s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/bcafde08919b2acb70e5cb779c1719da70ec93ad/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bcafde08919b2acb70e5cb779c1719da70ec93ad/Enhance".
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.490063s.
2025-10-09 23:11:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/bcafde08919b2acb70e5cb779c1719da70ec93ad/format_tpm_names".
2025-10-09 23:11:49 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.818927s.
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bcafde08919b2acb70e5cb779c1719da70ec93ad/Grad".
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:52 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.3407689999999999s.
2025-10-09 23:11:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bcafde08919b2acb70e5cb779c1719da70ec93ad/apply_mask".
2025-10-09 23:11:53 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:53 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.221804s.
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/bcafde08919b2acb70e5cb779c1719da70ec93ad/GradientThreshold".
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.19308s.
2025-10-09 23:12:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/bcafde08919b2acb70e5cb779c1719da70ec93ad/segmentation".
2025-10-09 23:12:01 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:12:42 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 40.981946s.
2025-10-09 23:12:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/bcafde08919b2acb70e5cb779c1719da70ec93ad/ArtifactMask".
2025-10-09 23:12:43 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:12:44 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.356248s.
2025-10-09 23:12:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotHeadmask".
2025-10-09 23:12:45 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:47 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.992472s.
2025-10-09 23:12:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bcafde08919b2acb70e5cb779c1719da70ec93ad/harmonize".
2025-10-09 23:12:49 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:12:50 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.622761s.
2025-10-09 23:12:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotSegmentation".
2025-10-09 23:12:51 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:53 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.239865s.
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bcafde08919b2acb70e5cb779c1719da70ec93ad/provenance".
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.040646s.
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bcafde08919b2acb70e5cb779c1719da70ec93ad/ComputeQI2".
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:13:05 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.146292s.
2025-10-09 23:13:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotAirmask".
2025-10-09 23:13:07 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:09 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.996328s.
2025-10-09 23:13:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/PlotArtmask".
2025-10-09 23:13:11 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:13 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.011031s.
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_headmask".
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003865s.
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bcafde08919b2acb70e5cb779c1719da70ec93ad/measures".
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.24207s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_segm".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003725s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_noisefit".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003651s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_airmask".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003667s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/bcafde08919b2acb70e5cb779c1719da70ec93ad/ds_report_artmask".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003647s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/bcafde08919b2acb70e5cb779c1719da70ec93ad/datasink".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000462s.
2025-10-09 23:13:23 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:13:24 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:13:24 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 16s per subject.
2025-10-09 23:13:24 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 36min 54s).
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