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ds000007-mriqc/logs/duct/sub-19_2025.10.10T00.36.36-3169160_stdout
Felix Hoffstaedter 2e91e87df9 [DATALAD RUNCMD] Compute MRIQC for sub-19 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-19 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-19",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:13:52 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3165537/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:38 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:38 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:38 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:38 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:38 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223637_90834af9-e847-414d-b635-67f10a7cbc93.toml.
2025-10-09 22:36:42 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:43 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:43 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:44 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:48 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:51 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/conform".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.403994s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6f455dc587ef103dc7398749ab0a187c938a03ca/pick_echo".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000226s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/provenance/mapflow/_provenance0".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046324s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/fff554c7fe5f6e3377845844f3b615c0df1894b1/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000149s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046124s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/pick_echo".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00012s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045633s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/7a831423db76e8a5cd49dc8703557d48163e53b1/pick_echo".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/provenance/mapflow/_provenance0".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045553s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b92460507d20a79ab7ef990a5d555c7ddc544721/pick_echo".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000107s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/provenance/mapflow/_provenance0".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045787s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f6ee3d2e48a7f73d447642441f151c1041b88f26/pick_echo".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00011s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/provenance/mapflow/_provenance0".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045795s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/pre_clip".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.987152s.
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/RotationMask".
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.454291s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotMosaicNoise".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.027719s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6f455dc587ef103dc7398749ab0a187c938a03ca/non_steady_state_detector".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.18327s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/fff554c7fe5f6e3377845844f3b615c0df1894b1/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.161712s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159908s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/7a831423db76e8a5cd49dc8703557d48163e53b1/non_steady_state_detector".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.160276s.
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b92460507d20a79ab7ef990a5d555c7ddc544721/non_steady_state_detector".
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.160782s.
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f6ee3d2e48a7f73d447642441f151c1041b88f26/non_steady_state_detector".
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.16026s.
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/pre_n4".
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 51.949802s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_background".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.006883s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6f455dc587ef103dc7398749ab0a187c938a03ca/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:31 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.136576s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/fff554c7fe5f6e3377845844f3b615c0df1894b1/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.138413s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034502s.
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/7a831423db76e8a5cd49dc8703557d48163e53b1/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034376s.
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b92460507d20a79ab7ef990a5d555c7ddc544721/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.125715s.
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f6ee3d2e48a7f73d447642441f151c1041b88f26/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034576s.
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/synthstrip".
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.146964s.
2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6f455dc587ef103dc7398749ab0a187c938a03ca/estimate_hm".
2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:14 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 112.562752s.
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:17 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.294144s.
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/fff554c7fe5f6e3377845844f3b615c0df1894b1/estimate_hm".
2025-10-09 22:41:18 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.861851s.
2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:09 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.267338s.
2025-10-09 22:43:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/estimate_hm".
2025-10-09 22:43:10 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.92449s.
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:03 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.215402s.
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/7a831423db76e8a5cd49dc8703557d48163e53b1/estimate_hm".
2025-10-09 22:45:04 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.806887s.
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.262379s.
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b92460507d20a79ab7ef990a5d555c7ddc544721/estimate_hm".
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.759161s.
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.288699s.
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f6ee3d2e48a7f73d447642441f151c1041b88f26/estimate_hm".
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:50:46 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.254263s.
2025-10-09 22:50:48 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:50:48 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.268108s.
2025-10-09 22:50:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/post_n4".
2025-10-09 22:50:50 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:51:02 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 11.627734s.
2025-10-09 22:51:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/smoothness".
2025-10-09 22:51:02 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:51:04 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.206048s.
2025-10-09 22:51:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotMosaicZoomed".
2025-10-09 22:51:06 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 2.8302899999999998s.
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotBrainmask".
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:51:12 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.490275s.
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6f455dc587ef103dc7398749ab0a187c938a03ca/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.398622s.
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6f455dc587ef103dc7398749ab0a187c938a03ca/ComputeFD".
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005147s.
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.367337s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/fff554c7fe5f6e3377845844f3b615c0df1894b1/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.314629s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/fff554c7fe5f6e3377845844f3b615c0df1894b1/ComputeFD".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.0021s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.389882s.
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.386514s.
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ComputeFD".
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002103s.
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.389917s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/7a831423db76e8a5cd49dc8703557d48163e53b1/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.45578s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/7a831423db76e8a5cd49dc8703557d48163e53b1/ComputeFD".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002106s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.389331s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b92460507d20a79ab7ef990a5d555c7ddc544721/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.330834s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b92460507d20a79ab7ef990a5d555c7ddc544721/ComputeFD".
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006105s.
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.38761s.
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f6ee3d2e48a7f73d447642441f151c1041b88f26/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.374515s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f6ee3d2e48a7f73d447642441f151c1041b88f26/ComputeFD".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005451s.
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.370563s.
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/final_masked".
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.202063s.
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization".
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:52:41 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:53:31 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:53:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:53:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:53:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:53:43 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:53:43 | INFO | niworkflows | Generating visual report
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 77.402842s.
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_zoomed".
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004113s.
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_bmask".
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003959s.
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6f455dc587ef103dc7398749ab0a187c938a03ca/mean/mapflow/_mean0".
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.600893s.
2025-10-09 22:54:00 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6f455dc587ef103dc7398749ab0a187c938a03ca/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:00 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.422621s.
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/quality/mapflow/_quality0".
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.211108s.
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/fff554c7fe5f6e3377845844f3b615c0df1894b1/mean/mapflow/_mean0".
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.545563s.
2025-10-09 22:54:06 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/fff554c7fe5f6e3377845844f3b615c0df1894b1/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:06 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.408861s.
2025-10-09 22:54:08 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/quality/mapflow/_quality0".
2025-10-09 22:54:08 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.185973s.
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/mean/mapflow/_mean0".
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.536986s.
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.411304s.
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/quality/mapflow/_quality0".
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.184387s.
2025-10-09 22:54:16 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/7a831423db76e8a5cd49dc8703557d48163e53b1/mean/mapflow/_mean0".
2025-10-09 22:54:16 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.536458s.
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/7a831423db76e8a5cd49dc8703557d48163e53b1/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:19 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.402376s.
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/quality/mapflow/_quality0".
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.193501s.
2025-10-09 22:54:22 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b92460507d20a79ab7ef990a5d555c7ddc544721/mean/mapflow/_mean0".
2025-10-09 22:54:22 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.558743s.
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b92460507d20a79ab7ef990a5d555c7ddc544721/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.428118s.
2025-10-09 22:54:26 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/quality/mapflow/_quality0".
2025-10-09 22:54:26 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.185091s.
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f6ee3d2e48a7f73d447642441f151c1041b88f26/mean/mapflow/_mean0".
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.561182s.
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f6ee3d2e48a7f73d447642441f151c1041b88f26/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.430288s.
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/quality/mapflow/_quality0".
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.196937s.
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_norm".
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003857s.
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/pre_clip".
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.220298s.
2025-10-09 22:54:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/SharpenEPI".
2025-10-09 22:54:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.443947s.
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.812785s.
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.855578s.
2025-10-09 22:54:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.866067s.
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/pre_clip".
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.222067s.
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/SharpenEPI".
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.494016s.
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.788685s.
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.836767s.
2025-10-09 22:54:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.865765s.
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/pre_clip".
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.250423s.
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/SharpenEPI".
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5151050000000001s.
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.815708s.
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.85658s.
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.869016s.
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/pre_clip".
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.22949s.
2025-10-09 22:55:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/SharpenEPI".
2025-10-09 22:55:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.501662s.
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.822394s.
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.867407s.
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.878236s.
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/pre_clip".
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.231987s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/SharpenEPI".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5062060000000002s.
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.797501s.
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.866507s.
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.880403s.
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/pre_clip".
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.257145s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/SharpenEPI".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.525856s.
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.827016s.
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.868732s.
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.881491s.
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/pre_n4".
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.494019s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00428s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004129s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004253s.
2025-10-09 22:55:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/pre_n4".
2025-10-09 22:55:37 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.458931s.
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004174s.
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004241s.
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004227s.
2025-10-09 22:55:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/pre_n4".
2025-10-09 22:55:39 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.458013s.
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004298s.
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004176s.
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004222s.
2025-10-09 22:55:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/pre_n4".
2025-10-09 22:55:41 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.435264s.
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004232s.
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004276s.
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004238s.
2025-10-09 22:55:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/pre_n4".
2025-10-09 22:55:43 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.429063s.
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004139s.
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004111s.
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004248s.
2025-10-09 22:55:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/pre_n4".
2025-10-09 22:55:45 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.423298s.
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004096s.
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004096s.
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004093s.
2025-10-09 22:55:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/synthstrip".
2025-10-09 22:55:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:19 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.844654s.
2025-10-09 22:56:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/synthstrip".
2025-10-09 22:56:20 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.851142s.
2025-10-09 22:56:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/synthstrip".
2025-10-09 22:56:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:27 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.967421s.
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/synthstrip".
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.986026s.
2025-10-09 22:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/synthstrip".
2025-10-09 22:58:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.8408s.
2025-10-09 22:58:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/synthstrip".
2025-10-09 22:58:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:59:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.865537s.
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/post_n4".
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.685011s.
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/EPI2MNI".
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:36 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/EPI2MNI/stderr.nipype-init).
2025-10-09 22:59:36 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:36 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/SharpenEPI/sub-19_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/SharpenEPI/sub-19_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/SharpenEPI/sub-19_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:32 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:32 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:32 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.942541s.
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.841119s.
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:53 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.228963s.
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/outliers/mapflow/_outliers0".
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:55 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.721032s.
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/gcor/mapflow/_gcor0".
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.110983s.
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/dilated_mask".
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016203s.
2025-10-09 23:01:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:01:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:01:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.844772s.
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/PlotBrainmask".
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:01:03 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.1818710000000001s.
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/post_n4".
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:01:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.69481s.
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/EPI2MNI".
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/SharpenEPI/sub-19_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/SharpenEPI/sub-19_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/SharpenEPI/sub-19_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:30 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:45 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 98.478252s.
2025-10-09 23:02:46 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:46 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.85546s.
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:51 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.235394s.
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/outliers/mapflow/_outliers0".
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:53 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.708197s.
2025-10-09 23:02:54 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/gcor/mapflow/_gcor0".
2025-10-09 23:02:54 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:55 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.01133s.
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/dilated_mask".
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016963s.
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.823698s.
2025-10-09 23:03:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/PlotBrainmask".
2025-10-09 23:03:00 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.1897s.
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/post_n4".
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:03:03 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.700653s.
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/EPI2MNI".
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:03:04 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:26 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:26 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/SharpenEPI/sub-19_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/SharpenEPI/sub-19_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/SharpenEPI/sub-19_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:23 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:23 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:23 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.185503s.
2025-10-09 23:04:38 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:38 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.833612s.
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:43 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.237821s.
2025-10-09 23:04:44 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/outliers/mapflow/_outliers0".
2025-10-09 23:04:44 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:45 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.732183s.
2025-10-09 23:04:46 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/gcor/mapflow/_gcor0".
2025-10-09 23:04:46 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:47 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.001945s.
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/dilated_mask".
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017478s.
2025-10-09 23:04:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.844634s.
2025-10-09 23:04:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/PlotBrainmask".
2025-10-09 23:04:52 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.1727509999999999s.
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/post_n4".
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:55 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.674764s.
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/EPI2MNI".
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:19 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/EPI2MNI/stderr.nipype-init).
2025-10-09 23:05:19 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:19 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/SharpenEPI/sub-19_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/SharpenEPI/sub-19_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/SharpenEPI/sub-19_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:14 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:14 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:14 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 92.235117s.
2025-10-09 23:06:30 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:30 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.843439s.
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:35 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.238014s.
2025-10-09 23:06:36 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/outliers/mapflow/_outliers0".
2025-10-09 23:06:36 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:37 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.736988s.
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/gcor/mapflow/_gcor0".
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.007826s.
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/dilated_mask".
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018216s.
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.84903s.
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/PlotBrainmask".
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.186979s.
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/post_n4".
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:47 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.697152s.
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/EPI2MNI".
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:48 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:07:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/EPI2MNI/stderr.nipype-init).
2025-10-09 23:07:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:07:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/SharpenEPI/sub-19_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/SharpenEPI/sub-19_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/SharpenEPI/sub-19_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:08:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:08:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:08:08 | INFO | niworkflows | Generating visual report
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.00103s.
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.8626430000000003s.
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/smoothness/mapflow/_smoothness0".
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:08:29 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.238844s.
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/outliers/mapflow/_outliers0".
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.709874s.
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/gcor/mapflow/_gcor0".
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.001069s.
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/dilated_mask".
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018635s.
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.819131s.
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/PlotBrainmask".
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.191567s.
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/post_n4".
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.697321s.
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/EPI2MNI".
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:08:42 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:09:07 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/EPI2MNI/stderr.nipype-init).
2025-10-09 23:09:07 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:09:07 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/SharpenEPI/sub-19_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/SharpenEPI/sub-19_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/SharpenEPI/sub-19_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:10:03 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:10:03 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:10:03 | INFO | niworkflows | Generating visual report
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.945285s.
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.8135529999999997s.
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/smoothness/mapflow/_smoothness0".
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.262047s.
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/outliers/mapflow/_outliers0".
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.732025s.
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/gcor/mapflow/_gcor0".
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.016925s.
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/dilated_mask".
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019149s.
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.852515s.
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/PlotBrainmask".
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.197519s.
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/final_masked".
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02517s.
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6f455dc587ef103dc7398749ab0a187c938a03ca/ResampleSegmentation".
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.949061s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_norm".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.012724s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/measures/mapflow/_measures0".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.377009s.
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.020948s.
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/subtract_mask".
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01604s.
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004247s.
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_bmask".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004085s.
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/final_masked".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024911s.
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/fff554c7fe5f6e3377845844f3b615c0df1894b1/ResampleSegmentation".
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.909142s.
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_norm".
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004219s.
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/measures/mapflow/_measures0".
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.382233s.
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01165s.
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/subtract_mask".
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01324s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004105s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_bmask".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004079s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/final_masked".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024601s.
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ResampleSegmentation".
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.944826s.
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_norm".
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00419s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/measures/mapflow/_measures0".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.360138s.
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.007632s.
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/subtract_mask".
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010794s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004201s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_bmask".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004033s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/final_masked".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024844s.
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/7a831423db76e8a5cd49dc8703557d48163e53b1/ResampleSegmentation".
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.904256s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_norm".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004074s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/measures/mapflow/_measures0".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.36044s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015177s.
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/subtract_mask".
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013287s.
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004087s.
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_bmask".
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004196s.
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/final_masked".
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022595s.
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b92460507d20a79ab7ef990a5d555c7ddc544721/ResampleSegmentation".
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.891308s.
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_norm".
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004298s.
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/measures/mapflow/_measures0".
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.377908s.
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010517s.
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/subtract_mask".
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014708s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004172s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_bmask".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004064s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/final_masked".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025083s.
2025-10-09 23:11:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6ee3d2e48a7f73d447642441f151c1041b88f26/ResampleSegmentation".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.910317s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_norm".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004078s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/measures/mapflow/_measures0".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.360084s.
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014766s.
2025-10-09 23:11:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/subtract_mask".
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008139s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004198s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_bmask".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004228s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/datasink/mapflow/_datasink0".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000522s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00369s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/parcels".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018525s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/datasink/mapflow/_datasink0".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000427s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003606s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/parcels".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020268s.
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/datasink/mapflow/_datasink0".
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000406s.
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00368s.
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/parcels".
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01819s.
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/datasink/mapflow/_datasink0".
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000428s.
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003678s.
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/parcels".
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016837s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/datasink/mapflow/_datasink0".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000417s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003619s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/parcels".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015514s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/datasink/mapflow/_datasink0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000418s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003653s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/parcels".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.013582s.
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.5041959999999999s.
2025-10-09 23:11:49 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:49 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.4740440000000001s.
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:52 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.61158s.
2025-10-09 23:11:53 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:53 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:54 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.473025s.
2025-10-09 23:11:54 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:54 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.446722s.
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:58 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.6347800000000001s.
2025-10-09 23:11:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6f455dc587ef103dc7398749ab0a187c938a03ca/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004024s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/fff554c7fe5f6e3377845844f3b615c0df1894b1/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004036s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e16c16901ea1e5d2be66816ad9f99c7c6135ce9e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004145s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/7a831423db76e8a5cd49dc8703557d48163e53b1/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004056s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b92460507d20a79ab7ef990a5d555c7ddc544721/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004109s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6ee3d2e48a7f73d447642441f151c1041b88f26/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003896s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:12:03 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.843675s.
2025-10-09 23:12:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:12:05 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:12:08 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.869269s.
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.852088s.
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:12:12 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:12:13 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:12:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/Enhance".
2025-10-09 23:12:14 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:15 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.507339s.
2025-10-09 23:12:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/format_tpm_names".
2025-10-09 23:12:17 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:17 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.799383s.
2025-10-09 23:12:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/Grad".
2025-10-09 23:12:19 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:20 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.34196s.
2025-10-09 23:12:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/apply_mask".
2025-10-09 23:12:21 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:12:21 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.198296s.
2025-10-09 23:12:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/GradientThreshold".
2025-10-09 23:12:23 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:27 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.349035s.
2025-10-09 23:12:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/segmentation".
2025-10-09 23:12:29 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:13:07 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 38.341328s.
2025-10-09 23:13:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ArtifactMask".
2025-10-09 23:13:09 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:13:10 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.3622239999999999s.
2025-10-09 23:13:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotHeadmask".
2025-10-09 23:13:11 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:13 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.023437s.
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/harmonize".
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:13:15 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.632274s.
2025-10-09 23:13:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotSegmentation".
2025-10-09 23:13:17 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.299724s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/provenance".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.041596s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ComputeQI2".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.51469s.
2025-10-09 23:13:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotAirmask".
2025-10-09 23:13:33 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:35 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.032557s.
2025-10-09 23:13:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/PlotArtmask".
2025-10-09 23:13:37 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:39 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.020653s.
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_headmask".
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003739s.
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/measures".
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:13:45 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.266382s.
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_segm".
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003866s.
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_noisefit".
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003686s.
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_airmask".
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003668s.
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/ds_report_artmask".
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003694s.
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d476f4dda01b70a19fd88dad6cdf45b861d1a1d2/datasink".
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000451s.
2025-10-09 23:13:48 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:13:50 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:13:50 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 18s per subject.
2025-10-09 23:13:50 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 37min 12s).
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