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ds000007-mriqc/logs/duct/sub-16_2025.10.10T00.36.31-2731223_stdout
Felix Hoffstaedter 8e783ad828 [DATALAD RUNCMD] Compute MRIQC for sub-16 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-16 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-16",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:12:43 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2726339/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:33 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:33 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:34 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:34 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223632_cc2d04eb-e15c-4be5-89c5-c24b06e2c232.toml.
2025-10-09 22:36:38 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:39 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:39 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:40 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:45 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:49 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/4e93787779cd8c14eb54ad27fd749f34628ac51a/conform".
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.400298s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/4eb760fa067a50664b937a3cd2fe1df7862f7895/pick_echo".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000376s.
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/provenance/mapflow/_provenance0".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045875s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/pick_echo".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000171s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/provenance/mapflow/_provenance0".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046471s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000142s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045706s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/pick_echo".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000183s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.072456s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f48d16986417f57e83c74fd4da13e982073625a5/pick_echo".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000123s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/provenance/mapflow/_provenance0".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046104s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/pick_echo".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000133s.
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/provenance/mapflow/_provenance0".
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044013s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/pre_clip".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.9542079999999995s.
2025-10-09 22:37:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/4e93787779cd8c14eb54ad27fd749f34628ac51a/RotationMask".
2025-10-09 22:37:13 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:14 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.474558s.
2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotMosaicNoise".
2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.507881s.
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/4eb760fa067a50664b937a3cd2fe1df7862f7895/non_steady_state_detector".
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.154659s.
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/non_steady_state_detector".
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153358s.
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/non_steady_state_detector".
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15615s.
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/non_steady_state_detector".
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152083s.
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f48d16986417f57e83c74fd4da13e982073625a5/non_steady_state_detector".
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.172712s.
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/non_steady_state_detector".
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.168037s.
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/pre_n4".
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 53.775595s.
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_background".
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007983s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/4eb760fa067a50664b937a3cd2fe1df7862f7895/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033555s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.147152s.
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.032817s.
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.08707s.
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f48d16986417f57e83c74fd4da13e982073625a5/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.165642s.
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.121849s.
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/synthstrip".
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 40.004778s.
2025-10-09 22:39:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4eb760fa067a50664b937a3cd2fe1df7862f7895/estimate_hm".
2025-10-09 22:39:23 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:53 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 89.589425s.
2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:40:54 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:40:58 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 3.946794s.
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/estimate_hm".
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:29 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 89.688261s.
2025-10-09 22:42:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:32 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:33 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.263314s.
2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/estimate_hm".
2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:05 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.288496s.
2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 2.520642s.
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/estimate_hm".
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:41 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.963656s.
2025-10-09 22:45:42 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:42 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.854986s.
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f48d16986417f57e83c74fd4da13e982073625a5/estimate_hm".
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:16 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.354061s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.315344s.
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/estimate_hm".
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:50 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.722321s.
2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 2.6758480000000002s.
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/post_n4".
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.563339s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4e93787779cd8c14eb54ad27fd749f34628ac51a/smoothness".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:49:14 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.587162s.
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotMosaicZoomed".
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:19 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.724695s.
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotBrainmask".
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:49:22 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.3386839999999998s.
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4eb760fa067a50664b937a3cd2fe1df7862f7895/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:31 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.36592s.
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4eb760fa067a50664b937a3cd2fe1df7862f7895/ComputeFD".
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002019s.
2025-10-09 22:49:34 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:34 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:34 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.508105s.
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.255914s.
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ComputeFD".
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00201s.
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.423519s.
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.20423s.
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ComputeFD".
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.007375s.
2025-10-09 22:49:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:58 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:58 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.440933s.
2025-10-09 22:50:00 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:00 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:07 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.359651s.
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ComputeFD".
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00198s.
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.411513s.
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f48d16986417f57e83c74fd4da13e982073625a5/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:19 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.352772s.
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f48d16986417f57e83c74fd4da13e982073625a5/ComputeFD".
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006273s.
2025-10-09 22:50:22 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:22 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:22 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.446579s.
2025-10-09 22:50:24 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:24 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.269847s.
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ComputeFD".
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.008029s.
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.408411s.
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/final_masked".
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.202473s.
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization".
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:50:38 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:51:28 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:51:28 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:51:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:51:40 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:51:40 | INFO | niworkflows | Generating visual report
2025-10-09 22:51:55 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 77.344548s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_zoomed".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004116s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_bmask".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003998s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/4eb760fa067a50664b937a3cd2fe1df7862f7895/mean/mapflow/_mean0".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.605342s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/4eb760fa067a50664b937a3cd2fe1df7862f7895/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.610014s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/quality/mapflow/_quality0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.4571290000000001s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/mean/mapflow/_mean0".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.637586s.
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/8ef749bf150f5b6e2aa44a905472da9345fe98b3/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.587586s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/quality/mapflow/_quality0".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.332895s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/mean/mapflow/_mean0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.842833s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/44864850a4ce65c2879f94fd2e8356afda1a0c4f/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.63723s.
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/quality/mapflow/_quality0".
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.296982s.
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/mean/mapflow/_mean0".
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.609713s.
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f892f63ff1b4023b2eccff6edebb0bebbaee0746/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.504162s.
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/quality/mapflow/_quality0".
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.528067s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f48d16986417f57e83c74fd4da13e982073625a5/mean/mapflow/_mean0".
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.672395s.
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f48d16986417f57e83c74fd4da13e982073625a5/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.514869s.
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/quality/mapflow/_quality0".
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.54173s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/mean/mapflow/_mean0".
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.727345s.
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5677659d982c0be9b917e8cf23b4703bf4cd7f12/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.578277s.
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/quality/mapflow/_quality0".
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.5240939999999998s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_norm".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00408s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/pre_clip".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.208614s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/SharpenEPI".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.638971s.
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.971991s.
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.973373s.
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.15655s.
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/pre_clip".
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.237236s.
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/SharpenEPI".
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.7462900000000001s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.298688s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.42933s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.337243s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/pre_clip".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.217619s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/SharpenEPI".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.68371s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:57 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.022458s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.15735s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.140953s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/pre_clip".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.215861s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/SharpenEPI".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.645804s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.911445s.
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.939567s.
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.978485s.
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/pre_clip".
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.254007s.
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/SharpenEPI".
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.605035s.
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:17 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.852935s.
2025-10-09 22:53:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.094075s.
2025-10-09 22:53:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.966472s.
2025-10-09 22:53:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/pre_clip".
2025-10-09 22:53:22 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:22 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.204236s.
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/SharpenEPI".
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:26 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6122100000000001s.
2025-10-09 22:53:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.937714s.
2025-10-09 22:53:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.124467s.
2025-10-09 22:53:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.979964s.
2025-10-09 22:53:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/pre_n4".
2025-10-09 22:53:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.751037s.
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005025s.
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004489s.
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004338s.
2025-10-09 22:53:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/pre_n4".
2025-10-09 22:53:35 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.582133s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003769s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004211s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004308s.
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/pre_n4".
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.617174s.
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003971s.
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004006s.
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003888s.
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/pre_n4".
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.643524s.
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003972s.
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004024s.
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004178s.
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/pre_n4".
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.497309s.
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005174s.
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004799s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004173s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/pre_n4".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.671577s.
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003675s.
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003695s.
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003727s.
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/synthstrip".
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.7801s.
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/synthstrip".
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 36.710839s.
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/synthstrip".
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:39 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 31.302434s.
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/synthstrip".
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:12 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 31.917349s.
2025-10-09 22:56:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/synthstrip".
2025-10-09 22:56:14 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:50 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 36.135183s.
2025-10-09 22:56:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/synthstrip".
2025-10-09 22:56:52 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:26 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.961605s.
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/post_n4".
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:57:29 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.895502s.
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/EPI2MNI".
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:57:30 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:57:48 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/EPI2MNI/stderr.nipype-init).
2025-10-09 22:57:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:57:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/SharpenEPI/sub-16_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/SharpenEPI/sub-16_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/SharpenEPI/sub-16_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:58:44 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:58:44 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:58:44 | INFO | niworkflows | Generating visual report
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.034599s.
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:59:07 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.506481s.
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/smoothness/mapflow/_smoothness0".
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:59:09 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.404176s.
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/outliers/mapflow/_outliers0".
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:59:11 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.89514s.
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/gcor/mapflow/_gcor0".
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.5347089999999999s.
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/dilated_mask".
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018347s.
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.818559s.
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/PlotBrainmask".
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.967068s.
2025-10-09 22:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/post_n4".
2025-10-09 22:59:22 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:23 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.939759s.
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/EPI2MNI".
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:24 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:42 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/EPI2MNI/stderr.nipype-init).
2025-10-09 22:59:42 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:42 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/SharpenEPI/sub-16_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/SharpenEPI/sub-16_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/SharpenEPI/sub-16_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:38 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:38 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:38 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:55 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.947156s.
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:01:01 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.346793s.
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/smoothness/mapflow/_smoothness0".
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.276786s.
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/outliers/mapflow/_outliers0".
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:01:05 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.946778s.
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/gcor/mapflow/_gcor0".
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:01:07 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.129144s.
2025-10-09 23:01:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/dilated_mask".
2025-10-09 23:01:08 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:01:08 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016404s.
2025-10-09 23:01:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:01:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:01:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.219284s.
2025-10-09 23:01:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/PlotBrainmask".
2025-10-09 23:01:12 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:01:13 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.16659s.
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/post_n4".
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:01:15 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.883853s.
2025-10-09 23:01:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/EPI2MNI".
2025-10-09 23:01:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:36 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:36 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/SharpenEPI/sub-16_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/SharpenEPI/sub-16_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/SharpenEPI/sub-16_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:31 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:31 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:31 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:49 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 92.919488s.
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:55 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.7532689999999995s.
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.265255s.
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/outliers/mapflow/_outliers0".
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:59 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.748124s.
2025-10-09 23:03:00 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/gcor/mapflow/_gcor0".
2025-10-09 23:03:00 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.442177s.
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/dilated_mask".
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015033s.
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:03:05 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.10767s.
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/PlotBrainmask".
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:03:08 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.911695s.
2025-10-09 23:03:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/post_n4".
2025-10-09 23:03:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:03:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.897886s.
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/EPI2MNI".
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:03:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/SharpenEPI/sub-16_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/SharpenEPI/sub-16_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/SharpenEPI/sub-16_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:29 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:29 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:29 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:46 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.963698s.
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:53 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.724735s.
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:55 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.267828s.
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/outliers/mapflow/_outliers0".
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:57 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.901267s.
2025-10-09 23:04:58 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/gcor/mapflow/_gcor0".
2025-10-09 23:04:58 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.220831s.
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/dilated_mask".
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017624s.
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:05:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.012527s.
2025-10-09 23:05:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/PlotBrainmask".
2025-10-09 23:05:04 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:05:06 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.2653349999999999s.
2025-10-09 23:05:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/post_n4".
2025-10-09 23:05:06 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:05:07 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.9004s.
2025-10-09 23:05:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/EPI2MNI".
2025-10-09 23:05:08 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:05:08 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:27 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/EPI2MNI/stderr.nipype-init).
2025-10-09 23:05:27 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:27 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/SharpenEPI/sub-16_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/SharpenEPI/sub-16_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/SharpenEPI/sub-16_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:25 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:25 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:25 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 95.391708s.
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:49 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.975735s.
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:51 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.27444s.
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/outliers/mapflow/_outliers0".
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:53 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.806604s.
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/gcor/mapflow/_gcor0".
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.141915s.
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/dilated_mask".
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015274s.
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.940095s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/PlotBrainmask".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.293951s.
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/post_n4".
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:07:03 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.914481s.
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/EPI2MNI".
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:07:05 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:07:24 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/EPI2MNI/stderr.nipype-init).
2025-10-09 23:07:24 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:07:24 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/SharpenEPI/sub-16_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/SharpenEPI/sub-16_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/SharpenEPI/sub-16_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:08:20 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:08:20 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:08:20 | INFO | niworkflows | Generating visual report
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 92.784944s.
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.952142s.
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/smoothness/mapflow/_smoothness0".
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:08:45 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.361457s.
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/outliers/mapflow/_outliers0".
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.792794s.
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/gcor/mapflow/_gcor0".
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.212481s.
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/dilated_mask".
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015401s.
2025-10-09 23:08:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.917589s.
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/PlotBrainmask".
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:55 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.056695s.
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/final_masked".
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024285s.
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4eb760fa067a50664b937a3cd2fe1df7862f7895/ResampleSegmentation".
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.09873s.
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_norm".
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004212s.
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/measures/mapflow/_measures0".
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.406512s.
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:03 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.021916s.
2025-10-09 23:09:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/subtract_mask".
2025-10-09 23:09:05 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:05 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.02146s.
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005064s.
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_bmask".
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004911s.
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/final_masked".
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.047041s.
2025-10-09 23:09:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ResampleSegmentation".
2025-10-09 23:09:09 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.130636s.
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_norm".
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003991s.
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/measures/mapflow/_measures0".
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.432185s.
2025-10-09 23:09:13 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:13 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:13 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015204s.
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/subtract_mask".
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010836s.
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004404s.
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_bmask".
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004509s.
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/final_masked".
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024997s.
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ResampleSegmentation".
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.146321s.
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_norm".
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00415s.
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/measures/mapflow/_measures0".
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.433592s.
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014832s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/subtract_mask".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.017649s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004282s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_bmask".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00411s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/final_masked".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.020872s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ResampleSegmentation".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:30 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.088045s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_norm".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00423s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/measures/mapflow/_measures0".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.450595s.
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016031s.
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/subtract_mask".
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.017671s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004463s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_bmask".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004285s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f48d16986417f57e83c74fd4da13e982073625a5/final_masked".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025514s.
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f48d16986417f57e83c74fd4da13e982073625a5/ResampleSegmentation".
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.128007s.
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_norm".
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00531s.
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/measures/mapflow/_measures0".
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.401484s.
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011809s.
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/subtract_mask".
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.028093s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003888s.
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_bmask".
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003837s.
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/final_masked".
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027811s.
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ResampleSegmentation".
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.036996s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_norm".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00473s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/measures/mapflow/_measures0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.530392s.
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.008243s.
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/subtract_mask".
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.029525s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.006842s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_bmask".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004032s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/datasink/mapflow/_datasink0".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000549s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003608s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/parcels".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.025467s.
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/datasink/mapflow/_datasink0".
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00043s.
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003847s.
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/parcels".
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.028609s.
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/datasink/mapflow/_datasink0".
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000463s.
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003883s.
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/parcels".
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.027907s.
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/datasink/mapflow/_datasink0".
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000409s.
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003514s.
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/parcels".
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.021287s.
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/datasink/mapflow/_datasink0".
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000459s.
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f48d16986417f57e83c74fd4da13e982073625a5/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.005002s.
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/parcels".
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019176s.
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/datasink/mapflow/_datasink0".
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000543s.
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004163s.
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/parcels".
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01773s.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:10:10 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.800854s.
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.721845s.
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.483129s.
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.9458609999999998s.
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.8637320000000002s.
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 2.607372s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4eb760fa067a50664b937a3cd2fe1df7862f7895/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00519s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8ef749bf150f5b6e2aa44a905472da9345fe98b3/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004151s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/44864850a4ce65c2879f94fd2e8356afda1a0c4f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.0093s.
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f892f63ff1b4023b2eccff6edebb0bebbaee0746/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004829s.
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f48d16986417f57e83c74fd4da13e982073625a5/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00391s.
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5677659d982c0be9b917e8cf23b4703bf4cd7f12/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004208s.
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.755998s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.565078s.
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.45394s.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4e93787779cd8c14eb54ad27fd749f34628ac51a/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4e93787779cd8c14eb54ad27fd749f34628ac51a/Enhance".
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.508124s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/4e93787779cd8c14eb54ad27fd749f34628ac51a/format_tpm_names".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.931516s.
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4e93787779cd8c14eb54ad27fd749f34628ac51a/Grad".
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.045231s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4e93787779cd8c14eb54ad27fd749f34628ac51a/apply_mask".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.253077s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4e93787779cd8c14eb54ad27fd749f34628ac51a/GradientThreshold".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.018195s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/4e93787779cd8c14eb54ad27fd749f34628ac51a/segmentation".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 48.000229s.
2025-10-09 23:11:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/4e93787779cd8c14eb54ad27fd749f34628ac51a/ArtifactMask".
2025-10-09 23:11:57 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:11:58 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.2924470000000001s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotHeadmask".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:02 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.986939s.
2025-10-09 23:12:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4e93787779cd8c14eb54ad27fd749f34628ac51a/harmonize".
2025-10-09 23:12:03 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:12:04 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.578682s.
2025-10-09 23:12:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotSegmentation".
2025-10-09 23:12:05 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:08 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 3.088547s.
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4e93787779cd8c14eb54ad27fd749f34628ac51a/provenance".
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.04809s.
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4e93787779cd8c14eb54ad27fd749f34628ac51a/ComputeQI2".
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:12:18 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 8.769361s.
2025-10-09 23:12:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotAirmask".
2025-10-09 23:12:19 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:22 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.784788s.
2025-10-09 23:12:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/PlotArtmask".
2025-10-09 23:12:23 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:25 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.510877s.
2025-10-09 23:12:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_headmask".
2025-10-09 23:12:27 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:12:27 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004435s.
2025-10-09 23:12:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4e93787779cd8c14eb54ad27fd749f34628ac51a/measures".
2025-10-09 23:12:27 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:12:35 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 7.693554s.
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_segm".
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003692s.
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_noisefit".
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003539s.
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_airmask".
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:12:37 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003823s.
2025-10-09 23:12:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4e93787779cd8c14eb54ad27fd749f34628ac51a/ds_report_artmask".
2025-10-09 23:12:38 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:12:38 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003748s.
2025-10-09 23:12:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4e93787779cd8c14eb54ad27fd749f34628ac51a/datasink".
2025-10-09 23:12:38 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:12:38 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00064s.
2025-10-09 23:12:39 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:12:40 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:12:40 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 09s per subject.
2025-10-09 23:12:40 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 36min 08s).
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