ds000007-mriqc/logs/duct/sub-13_2025.10.10T00.36.28-1930592_stdout
Felix Hoffstaedter 91200d6f91 [DATALAD RUNCMD] Compute MRIQC for sub-13
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-13 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-13",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:11:48 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_1927180/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:30 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:30 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:30 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:30 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.02 GB [maximum|average].
2025-10-09 22:36:30 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223629_eb76c7e1-bfd2-4f85-8bd1-5d212d876799.toml.
2025-10-09 22:36:34 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:35 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:35 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:36 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:40 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:44 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/d4bb086893b099466d88f4f7654df0092b5d9d86/conform".
2025-10-09 22:36:44 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:44 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.409849s.
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/cda09d85147db528b938ef1b80bf4e34c954b939/pick_echo".
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000231s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/provenance/mapflow/_provenance0".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045472s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/pick_echo".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000115s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/provenance/mapflow/_provenance0".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045282s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/d08405ac59ecec43adb9b6030477002007e35e79/pick_echo".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000127s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/provenance/mapflow/_provenance0".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044838s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/pick_echo".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000116s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/provenance/mapflow/_provenance0".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045155s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/pick_echo".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/provenance/mapflow/_provenance0".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044931s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000106s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.00847s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/pre_clip".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.143543s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/d4bb086893b099466d88f4f7654df0092b5d9d86/RotationMask".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.463367s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotMosaicNoise".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:14 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.016019s.
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/cda09d85147db528b938ef1b80bf4e34c954b939/non_steady_state_detector".
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159881s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/non_steady_state_detector".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159769s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/d08405ac59ecec43adb9b6030477002007e35e79/non_steady_state_detector".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.157396s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/non_steady_state_detector".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.158379s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/non_steady_state_detector".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15769s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.116525s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/pre_n4".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:20 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 52.033848s.
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_background".
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.00689s.
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/cda09d85147db528b938ef1b80bf4e34c954b939/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033658s.
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.055996s.
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/d08405ac59ecec43adb9b6030477002007e35e79/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033938s.
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033724s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033828s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.225666s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/synthstrip".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:13 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 38.975861s.
2025-10-09 22:39:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cda09d85147db528b938ef1b80bf4e34c954b939/estimate_hm".
2025-10-09 22:39:14 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:03 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.188832s.
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:05 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.280425s.
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/estimate_hm".
2025-10-09 22:41:06 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:56 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.257959s.
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.263487s.
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d08405ac59ecec43adb9b6030477002007e35e79/estimate_hm".
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:51 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.130898s.
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:53 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.260307s.
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/estimate_hm".
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.243692s.
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:46 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.266507s.
2025-10-09 22:46:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/estimate_hm".
2025-10-09 22:46:48 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.252158s.
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:41 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.2646709999999999s.
2025-10-09 22:48:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/estimate_hm".
2025-10-09 22:48:42 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 19.309216s.
2025-10-09 22:49:02 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:49:02 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:03 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.111992s.
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/post_n4".
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 11.710781s.
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d4bb086893b099466d88f4f7654df0092b5d9d86/smoothness".
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.198656s.
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotMosaicZoomed".
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.190475s.
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotBrainmask".
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.386827s.
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cda09d85147db528b938ef1b80bf4e34c954b939/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.884779s.
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cda09d85147db528b938ef1b80bf4e34c954b939/ComputeFD".
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005682s.
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.366126s.
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.884557s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ComputeFD".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002139s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:55 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.364548s.
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d08405ac59ecec43adb9b6030477002007e35e79/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.8870059999999995s.
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d08405ac59ecec43adb9b6030477002007e35e79/ComputeFD".
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005303s.
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.365413s.
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.874879s.
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ComputeFD".
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002222s.
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:21 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.367208s.
2025-10-09 22:50:22 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:22 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.8750160000000005s.
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ComputeFD".
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002096s.
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:32 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:33 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.366017s.
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 1.42827s.
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ComputeFD".
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:36 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.000835s.
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.129572s.
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/final_masked".
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.226091s.
2025-10-09 22:50:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization".
2025-10-09 22:50:42 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:50:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:51:31 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:51:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:51:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:51:43 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:51:44 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:51:44 | INFO | niworkflows | Generating visual report
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 75.566323s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_zoomed".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004106s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_bmask".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003972s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/cda09d85147db528b938ef1b80bf4e34c954b939/mean/mapflow/_mean0".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.617897s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/cda09d85147db528b938ef1b80bf4e34c954b939/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.404635s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/quality/mapflow/_quality0".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.232458s.
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/mean/mapflow/_mean0".
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.549806s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.437221s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/quality/mapflow/_quality0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.207349s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/d08405ac59ecec43adb9b6030477002007e35e79/mean/mapflow/_mean0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.572133s.
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/d08405ac59ecec43adb9b6030477002007e35e79/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.430854s.
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/quality/mapflow/_quality0".
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.191891s.
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/mean/mapflow/_mean0".
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.572053s.
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.409194s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/quality/mapflow/_quality0".
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.208932s.
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/mean/mapflow/_mean0".
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.548s.
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/314c103b4ea5c1fdf4570990d2f6a47630bfe739/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.406762s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/quality/mapflow/_quality0".
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.205644s.
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/mean/mapflow/_mean0".
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.217829s.
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/e61ba4e2cdece9bd32c8d87f13c65726673a0619/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.163743s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/quality/mapflow/_quality0".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 0.298248s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_norm".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003851s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/pre_clip".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.217035s.
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/SharpenEPI".
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.46729s.
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.806954s.
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.851693s.
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.863659s.
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/pre_clip".
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.224626s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/SharpenEPI".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.496551s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.814973s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.859913s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.8721s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/pre_clip".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.22681s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/SharpenEPI".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5011299999999999s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.793794s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.839135s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.868124s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/pre_clip".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.255104s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/SharpenEPI".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5271219999999999s.
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.82108s.
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.8568s.
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.875471s.
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/pre_clip".
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.23211s.
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/SharpenEPI".
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.508922s.
2025-10-09 22:53:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.82452s.
2025-10-09 22:53:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.867975s.
2025-10-09 22:53:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.880614s.
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/pre_clip".
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.23482s.
2025-10-09 22:53:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/SharpenEPI".
2025-10-09 22:53:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.510451s.
2025-10-09 22:53:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.816524s.
2025-10-09 22:53:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.872183s.
2025-10-09 22:53:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.885014s.
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/pre_n4".
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.518769s.
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004325s.
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004258s.
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004153s.
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/pre_n4".
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.441376s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004213s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004236s.
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004052s.
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/pre_n4".
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.459181s.
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.0041s.
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004066s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004088s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/pre_n4".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.454666s.
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004192s.
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004124s.
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004061s.
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/pre_n4".
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.455891s.
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004118s.
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004129s.
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004193s.
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/pre_n4".
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.455223s.
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004301s.
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004219s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004205s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/synthstrip".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.899921s.
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/synthstrip".
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.981201s.
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/synthstrip".
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.884354s.
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/synthstrip".
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.862865s.
2025-10-09 22:56:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/synthstrip".
2025-10-09 22:56:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.888884s.
2025-10-09 22:56:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/synthstrip".
2025-10-09 22:56:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.883904s.
2025-10-09 22:57:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/post_n4".
2025-10-09 22:57:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:57:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.657256s.
2025-10-09 22:57:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/EPI2MNI".
2025-10-09 22:57:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:57:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:57:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:57:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/SharpenEPI/sub-13_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/SharpenEPI/sub-13_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/SharpenEPI/sub-13_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:58:32 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:58:32 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:58:32 | INFO | niworkflows | Generating visual report
2025-10-09 22:58:47 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.201319s.
2025-10-09 22:58:48 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:58:48 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.686573s.
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/smoothness/mapflow/_smoothness0".
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.233947s.
2025-10-09 22:58:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/outliers/mapflow/_outliers0".
2025-10-09 22:58:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:58:55 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.750593s.
2025-10-09 22:58:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/gcor/mapflow/_gcor0".
2025-10-09 22:58:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.106625s.
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/dilated_mask".
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016323s.
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.80295s.
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/PlotBrainmask".
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:59:04 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.179508s.
2025-10-09 22:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/post_n4".
2025-10-09 22:59:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.69214s.
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/EPI2MNI".
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/SharpenEPI/sub-13_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/SharpenEPI/sub-13_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/SharpenEPI/sub-13_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:27 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:27 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:27 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 95.149228s.
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.688595s.
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:47 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.233514s.
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/outliers/mapflow/_outliers0".
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:49 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.706185s.
2025-10-09 23:00:50 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/gcor/mapflow/_gcor0".
2025-10-09 23:00:50 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:51 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.007037s.
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/dilated_mask".
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016814s.
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:00:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.807461s.
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/PlotBrainmask".
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.195178s.
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/post_n4".
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:00:59 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.686264s.
2025-10-09 23:01:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/EPI2MNI".
2025-10-09 23:01:00 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:00 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:23 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:23 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/SharpenEPI/sub-13_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/SharpenEPI/sub-13_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/SharpenEPI/sub-13_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:21 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:21 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:21 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 95.104047s.
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.641895s.
2025-10-09 23:02:41 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:41 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:41 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.232207s.
2025-10-09 23:02:43 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/outliers/mapflow/_outliers0".
2025-10-09 23:02:43 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:43 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.699453s.
2025-10-09 23:02:45 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/gcor/mapflow/_gcor0".
2025-10-09 23:02:45 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:46 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.010169s.
2025-10-09 23:02:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/dilated_mask".
2025-10-09 23:02:47 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:47 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016549s.
2025-10-09 23:02:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.834455s.
2025-10-09 23:02:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/PlotBrainmask".
2025-10-09 23:02:51 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.191664s.
2025-10-09 23:02:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/post_n4".
2025-10-09 23:02:53 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.686914s.
2025-10-09 23:02:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/EPI2MNI".
2025-10-09 23:02:55 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:55 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:16 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:16 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/SharpenEPI/sub-13_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/SharpenEPI/sub-13_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/SharpenEPI/sub-13_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:14 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:14 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:14 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.549475s.
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:32 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.630779s.
2025-10-09 23:04:33 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:33 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:33 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.235481s.
2025-10-09 23:04:35 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/outliers/mapflow/_outliers0".
2025-10-09 23:04:35 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:35 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.707276s.
2025-10-09 23:04:37 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/gcor/mapflow/_gcor0".
2025-10-09 23:04:37 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:38 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.012499s.
2025-10-09 23:04:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/dilated_mask".
2025-10-09 23:04:39 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:39 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.021251s.
2025-10-09 23:04:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.835187s.
2025-10-09 23:04:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/PlotBrainmask".
2025-10-09 23:04:43 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:44 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.192787s.
2025-10-09 23:04:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/post_n4".
2025-10-09 23:04:45 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:45 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.690835s.
2025-10-09 23:04:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/EPI2MNI".
2025-10-09 23:04:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:10 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/EPI2MNI/stderr.nipype-init).
2025-10-09 23:05:10 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:10 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/SharpenEPI/sub-13_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/SharpenEPI/sub-13_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/SharpenEPI/sub-13_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:06 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:06 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.966092s.
2025-10-09 23:06:23 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:23 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:26 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.632079s.
2025-10-09 23:06:27 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:27 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:27 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.242974s.
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/outliers/mapflow/_outliers0".
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.705742s.
2025-10-09 23:06:31 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/gcor/mapflow/_gcor0".
2025-10-09 23:06:31 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:32 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.010895s.
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/dilated_mask".
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015567s.
2025-10-09 23:06:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.832958s.
2025-10-09 23:06:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/PlotBrainmask".
2025-10-09 23:06:37 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.191347s.
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/post_n4".
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.698133s.
2025-10-09 23:06:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/EPI2MNI".
2025-10-09 23:06:41 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:41 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:07:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:07:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/SharpenEPI/sub-13_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/SharpenEPI/sub-13_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/SharpenEPI/sub-13_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:56 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:56 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:56 | INFO | niworkflows | Generating visual report
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.404163s.
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 2.845794s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/smoothness/mapflow/_smoothness0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.260584s.
2025-10-09 23:08:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/outliers/mapflow/_outliers0".
2025-10-09 23:08:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:17 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.326284s.
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/gcor/mapflow/_gcor0".
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.378896s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/dilated_mask".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018583s.
2025-10-09 23:08:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.834297s.
2025-10-09 23:08:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/PlotBrainmask".
2025-10-09 23:08:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.196937s.
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cda09d85147db528b938ef1b80bf4e34c954b939/final_masked".
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023967s.
2025-10-09 23:08:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cda09d85147db528b938ef1b80bf4e34c954b939/ResampleSegmentation".
2025-10-09 23:08:29 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.942899s.
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_norm".
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004121s.
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/measures/mapflow/_measures0".
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.379869s.
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019259s.
2025-10-09 23:08:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/subtract_mask".
2025-10-09 23:08:35 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:35 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014993s.
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004063s.
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_bmask".
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004171s.
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/final_masked".
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024357s.
2025-10-09 23:08:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ResampleSegmentation".
2025-10-09 23:08:39 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.897472s.
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_norm".
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004144s.
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/measures/mapflow/_measures0".
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.384688s.
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010661s.
2025-10-09 23:08:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/subtract_mask".
2025-10-09 23:08:45 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:45 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.017346s.
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004331s.
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_bmask".
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004024s.
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d08405ac59ecec43adb9b6030477002007e35e79/final_masked".
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.020845s.
2025-10-09 23:08:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d08405ac59ecec43adb9b6030477002007e35e79/ResampleSegmentation".
2025-10-09 23:08:49 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.887202s.
2025-10-09 23:08:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_norm".
2025-10-09 23:08:51 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:51 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004085s.
2025-10-09 23:08:51 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/measures/mapflow/_measures0".
2025-10-09 23:08:51 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:51 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.356634s.
2025-10-09 23:08:53 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:53 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:53 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014369s.
2025-10-09 23:08:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/subtract_mask".
2025-10-09 23:08:55 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:55 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010691s.
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004107s.
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_bmask".
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004058s.
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/final_masked".
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:57 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02476s.
2025-10-09 23:08:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ResampleSegmentation".
2025-10-09 23:08:59 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.881215s.
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_norm".
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.007303s.
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/measures/mapflow/_measures0".
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:01 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.358331s.
2025-10-09 23:09:03 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:03 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:03 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015282s.
2025-10-09 23:09:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/subtract_mask".
2025-10-09 23:09:05 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:05 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010603s.
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004137s.
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_bmask".
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004053s.
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/final_masked".
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:07 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024765s.
2025-10-09 23:09:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ResampleSegmentation".
2025-10-09 23:09:09 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.893651s.
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_norm".
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00418s.
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/measures/mapflow/_measures0".
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:11 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.380179s.
2025-10-09 23:09:13 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:13 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:13 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01434s.
2025-10-09 23:09:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/subtract_mask".
2025-10-09 23:09:15 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:15 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012224s.
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.0041s.
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_bmask".
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004221s.
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/final_masked".
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02508s.
2025-10-09 23:09:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ResampleSegmentation".
2025-10-09 23:09:19 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.885658s.
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_norm".
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004166s.
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/measures/mapflow/_measures0".
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.145103s.
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.007731s.
2025-10-09 23:09:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/subtract_mask".
2025-10-09 23:09:25 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:25 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010659s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004214s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_bmask".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004056s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/datasink/mapflow/_datasink0".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000508s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cda09d85147db528b938ef1b80bf4e34c954b939/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003693s.
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/parcels".
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020461s.
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/datasink/mapflow/_datasink0".
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000425s.
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003607s.
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/parcels".
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016256s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/datasink/mapflow/_datasink0".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000409s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d08405ac59ecec43adb9b6030477002007e35e79/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003514s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/parcels".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01893s.
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/datasink/mapflow/_datasink0".
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000414s.
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003572s.
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/parcels".
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017058s.
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/datasink/mapflow/_datasink0".
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000412s.
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003515s.
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/parcels".
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015609s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/datasink/mapflow/_datasink0".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000422s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003558s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/parcels".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.013876s.
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.495589s.
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.4800499999999999s.
2025-10-09 23:09:43 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:43 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.591195s.
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.448748s.
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:48 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.421456s.
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 0.735642s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cda09d85147db528b938ef1b80bf4e34c954b939/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004061s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19b9aa9388ed0d3cdfeae43c3a866216cbc98853/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004026s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d08405ac59ecec43adb9b6030477002007e35e79/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00414s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/43281d29230fe539ccb0893f2ed12aae4ed6aa3a/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004056s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/314c103b4ea5c1fdf4570990d2f6a47630bfe739/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004116s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/e61ba4e2cdece9bd32c8d87f13c65726673a0619/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003911s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.869164s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.886552s.
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.89759s.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/d4bb086893b099466d88f4f7654df0092b5d9d86/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d4bb086893b099466d88f4f7654df0092b5d9d86/Enhance".
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.49208s.
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/d4bb086893b099466d88f4f7654df0092b5d9d86/format_tpm_names".
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.787941s.
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d4bb086893b099466d88f4f7654df0092b5d9d86/Grad".
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.303878s.
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d4bb086893b099466d88f4f7654df0092b5d9d86/apply_mask".
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.19908s.
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/d4bb086893b099466d88f4f7654df0092b5d9d86/GradientThreshold".
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.274087s.
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/d4bb086893b099466d88f4f7654df0092b5d9d86/segmentation".
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 38.364558s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/d4bb086893b099466d88f4f7654df0092b5d9d86/ArtifactMask".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.358522s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotHeadmask".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.011038s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d4bb086893b099466d88f4f7654df0092b5d9d86/harmonize".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.632865s.
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotSegmentation".
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.31677s.
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d4bb086893b099466d88f4f7654df0092b5d9d86/provenance".
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.041461s.
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d4bb086893b099466d88f4f7654df0092b5d9d86/ComputeQI2".
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.607304s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotAirmask".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.054103s.
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/PlotArtmask".
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.046976s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_headmask".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003798s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d4bb086893b099466d88f4f7654df0092b5d9d86/measures".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.23609s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_segm".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003785s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_noisefit".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003716s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_airmask".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003663s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/d4bb086893b099466d88f4f7654df0092b5d9d86/ds_report_artmask".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004855s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/d4bb086893b099466d88f4f7654df0092b5d9d86/datasink".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000475s.
2025-10-09 23:11:45 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:11:46 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:11:46 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 02s per subject.
2025-10-09 23:11:46 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 35min 16s).
----------------------------------------------------------------