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ds000007-mriqc/logs/duct/sub-12_2025.10.10T00.36.30-3304123_stdout
Felix Hoffstaedter a8dc7e744e [DATALAD RUNCMD] Compute MRIQC for sub-12 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-12 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-12",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:10:03 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3300319/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:33 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:33 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:33 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223631_0eeb0c73-a09c-4d45-9495-fce11da02202.toml.
2025-10-09 22:36:37 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:38 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:38 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:39 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:42 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:46 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/40fb50b5735177a49ac1d80e99af961c08195d0e/conform".
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.350078s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/pick_echo".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00013s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/provenance/mapflow/_provenance0".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044002s.
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/a19f7402dad793fa490707538da57cb49280d706/pick_echo".
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000115s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/provenance/mapflow/_provenance0".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.043717s.
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/ae64b3e526d220134bab830769727289e843c3aa/pick_echo".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000135s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/provenance/mapflow/_provenance0".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.043782s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/pick_echo".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000123s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/provenance/mapflow/_provenance0".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.043685s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/48c91764634b3c19feca64de6e36bea021df3376/pick_echo".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000128s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.043924s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/bca80988caa1db31d68b85d07c0948bb39d97e4e/pick_echo".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000122s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044543s.
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/pre_clip".
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.879165s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/40fb50b5735177a49ac1d80e99af961c08195d0e/RotationMask".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.416414s.
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotMosaicNoise".
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.062935s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/non_steady_state_detector".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.150082s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/a19f7402dad793fa490707538da57cb49280d706/non_steady_state_detector".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.147564s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/ae64b3e526d220134bab830769727289e843c3aa/non_steady_state_detector".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.14739s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/non_steady_state_detector".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.148569s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/48c91764634b3c19feca64de6e36bea021df3376/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.148267s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/bca80988caa1db31d68b85d07c0948bb39d97e4e/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.149061s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/pre_n4".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 54.678239s.
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_background".
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007252s.
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.071304s.
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/a19f7402dad793fa490707538da57cb49280d706/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.072038s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/ae64b3e526d220134bab830769727289e843c3aa/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.031734s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.032366s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/48c91764634b3c19feca64de6e36bea021df3376/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.031406s.
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/bca80988caa1db31d68b85d07c0948bb39d97e4e/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.031534s.
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/synthstrip".
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 31.664291s.
2025-10-09 22:39:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/estimate_hm".
2025-10-09 22:39:10 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:41 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.747226s.
2025-10-09 22:40:42 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:40:42 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:40:44 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.022042s.
2025-10-09 22:40:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a19f7402dad793fa490707538da57cb49280d706/estimate_hm".
2025-10-09 22:40:44 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:16 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.655703s.
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.963884s.
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ae64b3e526d220134bab830769727289e843c3aa/estimate_hm".
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:49 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.848074s.
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.074241s.
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/estimate_hm".
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:24 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.729852s.
2025-10-09 22:45:25 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:25 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.091744s.
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/48c91764634b3c19feca64de6e36bea021df3376/estimate_hm".
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.188358s.
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.060342s.
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bca80988caa1db31d68b85d07c0948bb39d97e4e/estimate_hm".
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:31 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.717683s.
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:34 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.963949s.
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/post_n4".
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 12.561154s.
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/40fb50b5735177a49ac1d80e99af961c08195d0e/smoothness".
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.10815s.
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotMosaicZoomed".
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.306476s.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotBrainmask".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:48:59 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.099952s.
2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.313387s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ComputeFD".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001942s.
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.347255s.
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a19f7402dad793fa490707538da57cb49280d706/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.342243s.
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a19f7402dad793fa490707538da57cb49280d706/ComputeFD".
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:21 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001887s.
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.372338s.
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ae64b3e526d220134bab830769727289e843c3aa/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.360997s.
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ae64b3e526d220134bab830769727289e843c3aa/ComputeFD".
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:33 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001855s.
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.370412s.
2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.352544s.
2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ComputeFD".
2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003381s.
2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.348075s.
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/48c91764634b3c19feca64de6e36bea021df3376/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.333348s.
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/48c91764634b3c19feca64de6e36bea021df3376/ComputeFD".
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:57 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001849s.
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.345811s.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bca80988caa1db31d68b85d07c0948bb39d97e4e/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.359346s.
2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bca80988caa1db31d68b85d07c0948bb39d97e4e/ComputeFD".
2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:09 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001855s.
2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.372463s.
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/final_masked".
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.188063s.
2025-10-09 22:50:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization".
2025-10-09 22:50:15 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:50:15 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:50:57 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:50:57 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:50:57 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:51:07 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:51:08 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:51:08 | INFO | niworkflows | Generating visual report
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 65.064505s.
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_zoomed".
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003899s.
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_bmask".
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003746s.
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/mean/mapflow/_mean0".
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.582653s.
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f9068e72ed720acffcd47b0ae69c56aa7dde4399/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.396383s.
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/quality/mapflow/_quality0".
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.259483s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/a19f7402dad793fa490707538da57cb49280d706/mean/mapflow/_mean0".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.538214s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/a19f7402dad793fa490707538da57cb49280d706/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.373395s.
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/quality/mapflow/_quality0".
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.236979s.
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/ae64b3e526d220134bab830769727289e843c3aa/mean/mapflow/_mean0".
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.513007s.
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/ae64b3e526d220134bab830769727289e843c3aa/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.38001s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/quality/mapflow/_quality0".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.228149s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/mean/mapflow/_mean0".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.515697s.
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.376585s.
2025-10-09 22:51:43 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/quality/mapflow/_quality0".
2025-10-09 22:51:43 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.246348s.
2025-10-09 22:51:45 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/48c91764634b3c19feca64de6e36bea021df3376/mean/mapflow/_mean0".
2025-10-09 22:51:45 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:45 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.520573s.
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/48c91764634b3c19feca64de6e36bea021df3376/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.38347s.
2025-10-09 22:51:49 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/quality/mapflow/_quality0".
2025-10-09 22:51:49 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.253298s.
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/bca80988caa1db31d68b85d07c0948bb39d97e4e/mean/mapflow/_mean0".
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.544456s.
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/bca80988caa1db31d68b85d07c0948bb39d97e4e/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.40596s.
2025-10-09 22:51:55 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/quality/mapflow/_quality0".
2025-10-09 22:51:55 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.27762s.
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_norm".
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003929s.
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/pre_clip".
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.232845s.
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/SharpenEPI".
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.501161s.
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.841286s.
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.886161s.
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.897913s.
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/pre_clip".
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.214256s.
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/SharpenEPI".
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.525773s.
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.840833s.
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.894839s.
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.920738s.
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/pre_clip".
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.216705s.
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/SharpenEPI".
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.533824s.
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.835794s.
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.896719s.
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.908922s.
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/pre_clip".
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.227486s.
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/SharpenEPI".
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.572592s.
2025-10-09 22:52:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.846636s.
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.898592s.
2025-10-09 22:52:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.908354s.
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/pre_clip".
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.222779s.
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/SharpenEPI".
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5474329999999998s.
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.847545s.
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.89773s.
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.925455s.
2025-10-09 22:52:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/pre_clip".
2025-10-09 22:52:47 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:47 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.22533s.
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/SharpenEPI".
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.545702s.
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.826439s.
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.898875s.
2025-10-09 22:52:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.915741s.
2025-10-09 22:52:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/pre_n4".
2025-10-09 22:52:57 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.551315s.
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004173s.
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004009s.
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004039s.
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/pre_n4".
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4749780000000001s.
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00422s.
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004086s.
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00411s.
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/pre_n4".
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.487106s.
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004277s.
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004151s.
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004028s.
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/pre_n4".
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.483556s.
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004129s.
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004029s.
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004048s.
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/pre_n4".
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.47619s.
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004209s.
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004072s.
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004043s.
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/pre_n4".
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.472773s.
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00416s.
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004029s.
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004139s.
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/synthstrip".
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.93901s.
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/synthstrip".
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.962301s.
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/synthstrip".
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.802036s.
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/synthstrip".
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.997386s.
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/synthstrip".
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.951713s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/synthstrip".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:56 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.872817s.
2025-10-09 22:55:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/post_n4".
2025-10-09 22:55:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:58 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.685317s.
2025-10-09 22:55:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/EPI2MNI".
2025-10-09 22:55:59 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:55:59 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:56:19 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/EPI2MNI/stderr.nipype-init).
2025-10-09 22:56:19 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:56:19 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/SharpenEPI/sub-12_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/SharpenEPI/sub-12_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/SharpenEPI/sub-12_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:57:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:57:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:57:17 | INFO | niworkflows | Generating visual report
2025-10-09 22:57:29 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.933s.
2025-10-09 22:57:29 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:57:29 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:57:33 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.049936s.
2025-10-09 22:57:35 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/smoothness/mapflow/_smoothness0".
2025-10-09 22:57:35 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:57:35 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.223658s.
2025-10-09 22:57:37 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/outliers/mapflow/_outliers0".
2025-10-09 22:57:37 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.740823s.
2025-10-09 22:57:39 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/gcor/mapflow/_gcor0".
2025-10-09 22:57:39 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:57:40 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.1911559999999999s.
2025-10-09 22:57:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/dilated_mask".
2025-10-09 22:57:41 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:57:41 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014856s.
2025-10-09 22:57:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:57:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.844203s.
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/PlotBrainmask".
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:57:46 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.01185s.
2025-10-09 22:57:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/post_n4".
2025-10-09 22:57:47 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:57:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.686856s.
2025-10-09 22:57:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/EPI2MNI".
2025-10-09 22:57:49 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:57:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:58:09 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/EPI2MNI/stderr.nipype-init).
2025-10-09 22:58:09 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:58:09 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/SharpenEPI/sub-12_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/SharpenEPI/sub-12_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/SharpenEPI/sub-12_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:59:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:59:06 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:59:06 | INFO | niworkflows | Generating visual report
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.313753s.
2025-10-09 22:59:19 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:59:19 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:59:23 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.976664s.
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/smoothness/mapflow/_smoothness0".
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.216051s.
2025-10-09 22:59:27 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/outliers/mapflow/_outliers0".
2025-10-09 22:59:27 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.708712s.
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/gcor/mapflow/_gcor0".
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.05827s.
2025-10-09 22:59:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/dilated_mask".
2025-10-09 22:59:31 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:59:31 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015717s.
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.871969s.
2025-10-09 22:59:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/PlotBrainmask".
2025-10-09 22:59:35 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.025114s.
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/post_n4".
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:38 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.705222s.
2025-10-09 22:59:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/EPI2MNI".
2025-10-09 22:59:39 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:39 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:58 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/EPI2MNI/stderr.nipype-init).
2025-10-09 22:59:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/SharpenEPI/sub-12_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/SharpenEPI/sub-12_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/SharpenEPI/sub-12_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:57 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:57 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:57 | INFO | niworkflows | Generating visual report
2025-10-09 23:01:09 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.883935s.
2025-10-09 23:01:09 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:01:09 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:01:13 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.928562s.
2025-10-09 23:01:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/smoothness/mapflow/_smoothness0".
2025-10-09 23:01:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:01:15 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.245438s.
2025-10-09 23:01:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/outliers/mapflow/_outliers0".
2025-10-09 23:01:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:01:18 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.706079s.
2025-10-09 23:01:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/gcor/mapflow/_gcor0".
2025-10-09 23:01:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:01:20 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.070116s.
2025-10-09 23:01:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/dilated_mask".
2025-10-09 23:01:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:01:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01611s.
2025-10-09 23:01:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:01:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:01:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.830084s.
2025-10-09 23:01:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/PlotBrainmask".
2025-10-09 23:01:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:01:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.026914s.
2025-10-09 23:01:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/post_n4".
2025-10-09 23:01:27 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:01:28 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.75319s.
2025-10-09 23:01:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/EPI2MNI".
2025-10-09 23:01:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/SharpenEPI/sub-12_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/SharpenEPI/sub-12_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/SharpenEPI/sub-12_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:45 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:45 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:45 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.404256s.
2025-10-09 23:02:57 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:57 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:03:01 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.984792s.
2025-10-09 23:03:03 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/smoothness/mapflow/_smoothness0".
2025-10-09 23:03:03 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:03:03 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.217065s.
2025-10-09 23:03:05 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/outliers/mapflow/_outliers0".
2025-10-09 23:03:05 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.710078s.
2025-10-09 23:03:07 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/gcor/mapflow/_gcor0".
2025-10-09 23:03:07 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:03:08 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.075075s.
2025-10-09 23:03:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/dilated_mask".
2025-10-09 23:03:09 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:03:09 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.012753s.
2025-10-09 23:03:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:03:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.855097s.
2025-10-09 23:03:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/PlotBrainmask".
2025-10-09 23:03:13 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:03:14 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.033266s.
2025-10-09 23:03:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/post_n4".
2025-10-09 23:03:15 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:03:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.698163s.
2025-10-09 23:03:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/EPI2MNI".
2025-10-09 23:03:17 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:03:17 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:36 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/EPI2MNI/stderr.nipype-init).
2025-10-09 23:03:36 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:36 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/SharpenEPI/sub-12_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/SharpenEPI/sub-12_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/SharpenEPI/sub-12_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:31 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:31 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:31 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:43 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 86.004595s.
2025-10-09 23:04:45 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:45 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:49 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.976826s.
2025-10-09 23:04:51 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:51 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:51 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.227459s.
2025-10-09 23:04:53 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/outliers/mapflow/_outliers0".
2025-10-09 23:04:53 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.718657s.
2025-10-09 23:04:55 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/gcor/mapflow/_gcor0".
2025-10-09 23:04:55 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.070722s.
2025-10-09 23:04:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/dilated_mask".
2025-10-09 23:04:57 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:57 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017772s.
2025-10-09 23:04:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.82097s.
2025-10-09 23:05:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/PlotBrainmask".
2025-10-09 23:05:01 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.038677s.
2025-10-09 23:05:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/post_n4".
2025-10-09 23:05:03 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:05:04 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.685171s.
2025-10-09 23:05:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/EPI2MNI".
2025-10-09 23:05:05 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:05:05 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:24 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:24 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/SharpenEPI/sub-12_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/SharpenEPI/sub-12_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/SharpenEPI/sub-12_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:21 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:21 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:21 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.676127s.
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:37 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.000073s.
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.219582s.
2025-10-09 23:06:41 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/outliers/mapflow/_outliers0".
2025-10-09 23:06:41 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.725984s.
2025-10-09 23:06:43 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/gcor/mapflow/_gcor0".
2025-10-09 23:06:43 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.072013s.
2025-10-09 23:06:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/dilated_mask".
2025-10-09 23:06:45 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:45 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015484s.
2025-10-09 23:06:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.852546s.
2025-10-09 23:06:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/PlotBrainmask".
2025-10-09 23:06:49 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.075115s.
2025-10-09 23:06:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/final_masked".
2025-10-09 23:06:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:06:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022949s.
2025-10-09 23:06:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ResampleSegmentation".
2025-10-09 23:06:53 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.925602s.
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_norm".
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005714s.
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/measures/mapflow/_measures0".
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.355233s.
2025-10-09 23:06:57 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/timeseries/mapflow/_timeseries0".
2025-10-09 23:06:57 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:06:57 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.02206s.
2025-10-09 23:06:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/subtract_mask".
2025-10-09 23:06:59 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:06:59 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.006048s.
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004056s.
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_bmask".
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003904s.
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a19f7402dad793fa490707538da57cb49280d706/final_masked".
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022729s.
2025-10-09 23:07:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a19f7402dad793fa490707538da57cb49280d706/ResampleSegmentation".
2025-10-09 23:07:03 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.900027s.
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_norm".
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004039s.
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/measures/mapflow/_measures0".
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.353471s.
2025-10-09 23:07:07 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:07 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:07 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014614s.
2025-10-09 23:07:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/subtract_mask".
2025-10-09 23:07:09 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:09 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011799s.
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004028s.
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_bmask".
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003869s.
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ae64b3e526d220134bab830769727289e843c3aa/final_masked".
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022582s.
2025-10-09 23:07:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ae64b3e526d220134bab830769727289e843c3aa/ResampleSegmentation".
2025-10-09 23:07:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.894682s.
2025-10-09 23:07:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_norm".
2025-10-09 23:07:15 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:15 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00393s.
2025-10-09 23:07:15 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/measures/mapflow/_measures0".
2025-10-09 23:07:15 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.338756s.
2025-10-09 23:07:17 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:17 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:17 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.00897s.
2025-10-09 23:07:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/subtract_mask".
2025-10-09 23:07:19 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:19 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014926s.
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004067s.
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_bmask".
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004167s.
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/final_masked".
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022446s.
2025-10-09 23:07:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ResampleSegmentation".
2025-10-09 23:07:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.926876s.
2025-10-09 23:07:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_norm".
2025-10-09 23:07:25 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:25 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004025s.
2025-10-09 23:07:25 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/measures/mapflow/_measures0".
2025-10-09 23:07:25 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.336367s.
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015468s.
2025-10-09 23:07:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/subtract_mask".
2025-10-09 23:07:29 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:29 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014096s.
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004209s.
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_bmask".
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004186s.
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/48c91764634b3c19feca64de6e36bea021df3376/final_masked".
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023046s.
2025-10-09 23:07:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/48c91764634b3c19feca64de6e36bea021df3376/ResampleSegmentation".
2025-10-09 23:07:33 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.915307s.
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_norm".
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003923s.
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/measures/mapflow/_measures0".
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.338474s.
2025-10-09 23:07:37 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:37 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:37 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010425s.
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/subtract_mask".
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014214s.
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003971s.
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_bmask".
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003949s.
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/final_masked".
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02268s.
2025-10-09 23:07:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bca80988caa1db31d68b85d07c0948bb39d97e4e/ResampleSegmentation".
2025-10-09 23:07:43 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.974224s.
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_norm".
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.0041s.
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/measures/mapflow/_measures0".
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.362414s.
2025-10-09 23:07:47 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:47 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:47 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015822s.
2025-10-09 23:07:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/subtract_mask".
2025-10-09 23:07:49 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:49 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008681s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003958s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_bmask".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003958s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/datasink/mapflow/_datasink0".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000475s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003618s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/parcels".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016889s.
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/datasink/mapflow/_datasink0".
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000419s.
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a19f7402dad793fa490707538da57cb49280d706/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003509s.
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/parcels".
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017434s.
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/datasink/mapflow/_datasink0".
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000406s.
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ae64b3e526d220134bab830769727289e843c3aa/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003522s.
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/parcels".
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01564s.
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/datasink/mapflow/_datasink0".
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000508s.
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003637s.
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/parcels".
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015367s.
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/datasink/mapflow/_datasink0".
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000526s.
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/48c91764634b3c19feca64de6e36bea021df3376/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003592s.
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/parcels".
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014132s.
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/datasink/mapflow/_datasink0".
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000434s.
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003645s.
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/parcels".
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.012564s.
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.250235s.
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.218915s.
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.444163s.
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.241828s.
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.247854s.
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.399373s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f9068e72ed720acffcd47b0ae69c56aa7dde4399/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004118s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a19f7402dad793fa490707538da57cb49280d706/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004133s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ae64b3e526d220134bab830769727289e843c3aa/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004159s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/895b30a85836cf85a0328b4bb60dbd2c8e2a66fc/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003959s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/48c91764634b3c19feca64de6e36bea021df3376/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004068s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bca80988caa1db31d68b85d07c0948bb39d97e4e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00423s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.898942s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:25 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.964801s.
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:31 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.963922s.
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/40fb50b5735177a49ac1d80e99af961c08195d0e/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:08:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/40fb50b5735177a49ac1d80e99af961c08195d0e/Enhance".
2025-10-09 23:08:35 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.449543s.
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/40fb50b5735177a49ac1d80e99af961c08195d0e/format_tpm_names".
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.782988s.
2025-10-09 23:08:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/40fb50b5735177a49ac1d80e99af961c08195d0e/Grad".
2025-10-09 23:08:39 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.014637s.
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/40fb50b5735177a49ac1d80e99af961c08195d0e/apply_mask".
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.184886s.
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/40fb50b5735177a49ac1d80e99af961c08195d0e/GradientThreshold".
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:47 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 3.917716s.
2025-10-09 23:08:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/40fb50b5735177a49ac1d80e99af961c08195d0e/segmentation".
2025-10-09 23:08:49 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 38.529614s.
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/40fb50b5735177a49ac1d80e99af961c08195d0e/ArtifactMask".
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:09:30 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.059074s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotHeadmask".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.671114s.
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/40fb50b5735177a49ac1d80e99af961c08195d0e/harmonize".
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:09:34 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.494652s.
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotSegmentation".
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 1.904537s.
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/40fb50b5735177a49ac1d80e99af961c08195d0e/provenance".
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.04158s.
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/40fb50b5735177a49ac1d80e99af961c08195d0e/ComputeQI2".
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 9.64443s.
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotAirmask".
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.802914s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/PlotArtmask".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.799315s.
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_headmask".
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.00379s.
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/40fb50b5735177a49ac1d80e99af961c08195d0e/measures".
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.297416s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_segm".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003751s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_noisefit".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003587s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_airmask".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003642s.
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/40fb50b5735177a49ac1d80e99af961c08195d0e/ds_report_artmask".
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003649s.
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/40fb50b5735177a49ac1d80e99af961c08195d0e/datasink".
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000477s.
2025-10-09 23:09:59 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:10:00 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:10:00 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 04min 47s per subject.
2025-10-09 23:10:00 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 33min 29s).
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