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ds000007-mriqc/logs/duct/sub-11_2025.10.10T00.36.31-421398_stdout
Felix Hoffstaedter 6821122deb [DATALAD RUNCMD] Compute MRIQC for sub-11 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-11 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-11",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:09:56 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_416132/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:32 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:33 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:33 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223631_2f1b30a5-c51f-4890-96be-37d64aa14707.toml.
2025-10-09 22:36:37 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:37 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:38 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:38 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:42 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:45 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/4a65739c684b8ae0062057335f9de08194ed7145/conform".
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.360162s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/68a9c32d476b6d8c53859c472521ed91c117576c/pick_echo".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000243s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/provenance/mapflow/_provenance0".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042207s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/821605ac54017e622aca9c671bb4a11c57a4a1c0/pick_echo".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000118s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/provenance/mapflow/_provenance0".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042003s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/571f39948bc1edc15928909578720b10aa152e6f/pick_echo".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000126s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/provenance/mapflow/_provenance0".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042157s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/115858bc1f13b5c736f540fb385a05658d128857/pick_echo".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000122s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/provenance/mapflow/_provenance0".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042029s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042065s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/a6bd62456075108dc8faf3e37e14a1439c096252/pick_echo".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042654s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4a65739c684b8ae0062057335f9de08194ed7145/pre_clip".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.081308s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/4a65739c684b8ae0062057335f9de08194ed7145/RotationMask".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.401812s.
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotMosaicNoise".
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.093621s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/68a9c32d476b6d8c53859c472521ed91c117576c/non_steady_state_detector".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.144475s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/821605ac54017e622aca9c671bb4a11c57a4a1c0/non_steady_state_detector".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141695s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/571f39948bc1edc15928909578720b10aa152e6f/non_steady_state_detector".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.140754s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/115858bc1f13b5c736f540fb385a05658d128857/non_steady_state_detector".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141241s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141794s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/a6bd62456075108dc8faf3e37e14a1439c096252/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141827s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4a65739c684b8ae0062057335f9de08194ed7145/pre_n4".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 54.744123s.
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_background".
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.012774s.
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/68a9c32d476b6d8c53859c472521ed91c117576c/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.016297s.
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/821605ac54017e622aca9c671bb4a11c57a4a1c0/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.017001s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/571f39948bc1edc15928909578720b10aa152e6f/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.030825s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/115858bc1f13b5c736f540fb385a05658d128857/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.029932s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.011461s.
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/a6bd62456075108dc8faf3e37e14a1439c096252/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.013507s.
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4a65739c684b8ae0062057335f9de08194ed7145/synthstrip".
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:24 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 46.675485s.
2025-10-09 22:39:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/68a9c32d476b6d8c53859c472521ed91c117576c/estimate_hm".
2025-10-09 22:39:26 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:57 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.159321s.
2025-10-09 22:40:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:40:58 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:40:59 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.94122s.
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/821605ac54017e622aca9c671bb4a11c57a4a1c0/estimate_hm".
2025-10-09 22:41:00 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:31 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.859085s.
2025-10-09 22:42:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:32 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:33 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.926862s.
2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/571f39948bc1edc15928909578720b10aa152e6f/estimate_hm".
2025-10-09 22:42:34 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:06 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 92.204487s.
2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:08 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:09 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.923545s.
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/115858bc1f13b5c736f540fb385a05658d128857/estimate_hm".
2025-10-09 22:44:10 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:42 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.951429s.
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:44 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:45 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.920114s.
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/estimate_hm".
2025-10-09 22:45:46 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:17 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.167281s.
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:47:18 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:19 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.920096s.
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a6bd62456075108dc8faf3e37e14a1439c096252/estimate_hm".
2025-10-09 22:47:20 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:51 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.950541s.
2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:52 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.927205s.
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4a65739c684b8ae0062057335f9de08194ed7145/post_n4".
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 11.187668s.
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4a65739c684b8ae0062057335f9de08194ed7145/smoothness".
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 1.797806s.
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotMosaicZoomed".
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:11 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 2.9900349999999998s.
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotBrainmask".
2025-10-09 22:49:12 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:49:14 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.952851s.
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/68a9c32d476b6d8c53859c472521ed91c117576c/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.176409s.
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/68a9c32d476b6d8c53859c472521ed91c117576c/ComputeFD".
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001919s.
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.335472s.
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/821605ac54017e622aca9c671bb4a11c57a4a1c0/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:35 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.16968s.
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/821605ac54017e622aca9c671bb4a11c57a4a1c0/ComputeFD".
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:36 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005458s.
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.331719s.
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/571f39948bc1edc15928909578720b10aa152e6f/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.213477s.
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/571f39948bc1edc15928909578720b10aa152e6f/ComputeFD".
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001853s.
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.35149s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/115858bc1f13b5c736f540fb385a05658d128857/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:59 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.219151s.
2025-10-09 22:50:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/115858bc1f13b5c736f540fb385a05658d128857/ComputeFD".
2025-10-09 22:50:00 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:00 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004142s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.356064s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:11 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.171464s.
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ComputeFD".
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001815s.
2025-10-09 22:50:14 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:14 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:14 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.333236s.
2025-10-09 22:50:16 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a6bd62456075108dc8faf3e37e14a1439c096252/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:16 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:23 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.140709s.
2025-10-09 22:50:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a6bd62456075108dc8faf3e37e14a1439c096252/ComputeFD".
2025-10-09 22:50:24 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:24 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006401s.
2025-10-09 22:50:26 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:26 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:26 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.336753s.
2025-10-09 22:50:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/4a65739c684b8ae0062057335f9de08194ed7145/final_masked".
2025-10-09 22:50:28 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:50:28 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.1826s.
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization".
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:50:30 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:51:07 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:51:07 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:51:07 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:51:16 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:51:17 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:51:17 | INFO | niworkflows | Generating visual report
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 57.774631s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_zoomed".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003752s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_bmask".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00368s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/68a9c32d476b6d8c53859c472521ed91c117576c/mean/mapflow/_mean0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.540345s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/68a9c32d476b6d8c53859c472521ed91c117576c/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.36711s.
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/quality/mapflow/_quality0".
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.187628s.
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/821605ac54017e622aca9c671bb4a11c57a4a1c0/mean/mapflow/_mean0".
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.520689s.
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/821605ac54017e622aca9c671bb4a11c57a4a1c0/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.386152s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/quality/mapflow/_quality0".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.156566s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/571f39948bc1edc15928909578720b10aa152e6f/mean/mapflow/_mean0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.528935s.
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/571f39948bc1edc15928909578720b10aa152e6f/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.38301s.
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/quality/mapflow/_quality0".
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:45 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.152214s.
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/115858bc1f13b5c736f540fb385a05658d128857/mean/mapflow/_mean0".
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.529712s.
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/115858bc1f13b5c736f540fb385a05658d128857/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.36362s.
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/quality/mapflow/_quality0".
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.157421s.
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/mean/mapflow/_mean0".
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.500394s.
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.360989s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/quality/mapflow/_quality0".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.150532s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/a6bd62456075108dc8faf3e37e14a1439c096252/mean/mapflow/_mean0".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.49858s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/a6bd62456075108dc8faf3e37e14a1439c096252/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.365084s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/quality/mapflow/_quality0".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.1545s.
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_norm".
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003725s.
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/pre_clip".
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.210665s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/SharpenEPI".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.481857s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.792025s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.837367s.
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.844138s.
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/pre_clip".
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.213778s.
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/SharpenEPI".
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.537315s.
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.797761s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.836569s.
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.84117s.
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/pre_clip".
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.215648s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/SharpenEPI".
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.515004s.
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.798384s.
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.846723s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.828749s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/pre_clip".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.218501s.
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/SharpenEPI".
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.52491s.
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.795314s.
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.850528s.
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.850402s.
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/pre_clip".
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.226153s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/SharpenEPI".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.54338s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.806196s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.860838s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.860323s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/pre_clip".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.22389s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/SharpenEPI".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.526248s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.796382s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.854963s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.859357s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/pre_n4".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.511172s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003986s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004006s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00396s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/pre_n4".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.456081s.
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003985s.
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003996s.
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003939s.
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/pre_n4".
2025-10-09 22:53:08 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.448698s.
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003885s.
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004054s.
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004053s.
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/pre_n4".
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.449988s.
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003932s.
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003915s.
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004051s.
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/pre_n4".
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.457934s.
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004033s.
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00391s.
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003913s.
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/pre_n4".
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.456397s.
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003947s.
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004017s.
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004004s.
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/synthstrip".
2025-10-09 22:53:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.702228s.
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/synthstrip".
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.671336s.
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/synthstrip".
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.70026s.
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/synthstrip".
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.735258s.
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/synthstrip".
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:35 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.680155s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/synthstrip".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:03 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.734939s.
2025-10-09 22:56:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/post_n4".
2025-10-09 22:56:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:56:05 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.601615s.
2025-10-09 22:56:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/EPI2MNI".
2025-10-09 22:56:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:56:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:56:27 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/EPI2MNI/stderr.nipype-init).
2025-10-09 22:56:27 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:56:27 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/SharpenEPI/sub-11_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/SharpenEPI/sub-11_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/SharpenEPI/sub-11_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:57:26 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:57:26 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:57:26 | INFO | niworkflows | Generating visual report
2025-10-09 22:57:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.096937s.
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:57:41 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.153356s.
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/smoothness/mapflow/_smoothness0".
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.203418s.
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/outliers/mapflow/_outliers0".
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.630501s.
2025-10-09 22:57:46 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/gcor/mapflow/_gcor0".
2025-10-09 22:57:46 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:57:47 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.1493929999999999s.
2025-10-09 22:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/dilated_mask".
2025-10-09 22:57:48 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:57:48 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.012774s.
2025-10-09 22:57:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:57:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:57:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.759219s.
2025-10-09 22:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/PlotBrainmask".
2025-10-09 22:57:52 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:57:53 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.824444s.
2025-10-09 22:57:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/post_n4".
2025-10-09 22:57:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:57:55 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.617429s.
2025-10-09 22:57:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/EPI2MNI".
2025-10-09 22:57:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:57:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:58:17 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:58:17 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/SharpenEPI/sub-11_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/SharpenEPI/sub-11_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/SharpenEPI/sub-11_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:59:14 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:59:14 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:59:14 | INFO | niworkflows | Generating visual report
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.543957s.
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.143006s.
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/smoothness/mapflow/_smoothness0".
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.210928s.
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/outliers/mapflow/_outliers0".
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.619148s.
2025-10-09 22:59:34 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/gcor/mapflow/_gcor0".
2025-10-09 22:59:34 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:59:35 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.031146s.
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/dilated_mask".
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015032s.
2025-10-09 22:59:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:59:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.759472s.
2025-10-09 22:59:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/PlotBrainmask".
2025-10-09 22:59:40 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:59:41 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.832887s.
2025-10-09 22:59:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/post_n4".
2025-10-09 22:59:42 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:43 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.607895s.
2025-10-09 22:59:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/EPI2MNI".
2025-10-09 22:59:44 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:44 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:00:07 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/EPI2MNI/stderr.nipype-init).
2025-10-09 23:00:07 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:00:07 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/SharpenEPI/sub-11_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/SharpenEPI/sub-11_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/SharpenEPI/sub-11_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:01:02 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:01:02 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:01:02 | INFO | niworkflows | Generating visual report
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.342031s.
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:01:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.098716s.
2025-10-09 23:01:18 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/smoothness/mapflow/_smoothness0".
2025-10-09 23:01:18 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:01:18 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.204974s.
2025-10-09 23:01:20 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/outliers/mapflow/_outliers0".
2025-10-09 23:01:20 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:01:21 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.60688s.
2025-10-09 23:01:22 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/gcor/mapflow/_gcor0".
2025-10-09 23:01:22 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:01:23 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.035807s.
2025-10-09 23:01:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/dilated_mask".
2025-10-09 23:01:24 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:01:24 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015178s.
2025-10-09 23:01:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:01:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:01:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.766925s.
2025-10-09 23:01:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/PlotBrainmask".
2025-10-09 23:01:28 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:01:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.827133s.
2025-10-09 23:01:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/post_n4".
2025-10-09 23:01:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:01:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.617016s.
2025-10-09 23:01:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/EPI2MNI".
2025-10-09 23:01:32 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:54 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/EPI2MNI/stderr.nipype-init).
2025-10-09 23:01:54 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:54 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/SharpenEPI/sub-11_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/SharpenEPI/sub-11_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/SharpenEPI/sub-11_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:51 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:51 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:51 | INFO | niworkflows | Generating visual report
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.823471s.
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:03:05 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.078195s.
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/smoothness/mapflow/_smoothness0".
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.201399s.
2025-10-09 23:03:08 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/outliers/mapflow/_outliers0".
2025-10-09 23:03:08 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:03:09 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.615466s.
2025-10-09 23:03:10 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/gcor/mapflow/_gcor0".
2025-10-09 23:03:10 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:03:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.03593s.
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/dilated_mask".
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015125s.
2025-10-09 23:03:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:03:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:03:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.770587s.
2025-10-09 23:03:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/PlotBrainmask".
2025-10-09 23:03:16 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:03:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.840163s.
2025-10-09 23:03:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/post_n4".
2025-10-09 23:03:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:03:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.626688s.
2025-10-09 23:03:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/EPI2MNI".
2025-10-09 23:03:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:03:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:41 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/SharpenEPI/sub-11_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/SharpenEPI/sub-11_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/SharpenEPI/sub-11_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:38 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:38 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:38 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:49 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.234179s.
2025-10-09 23:04:50 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:50 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:53 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.086874s.
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.213101s.
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/outliers/mapflow/_outliers0".
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:57 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.611396s.
2025-10-09 23:04:58 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/gcor/mapflow/_gcor0".
2025-10-09 23:04:58 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:59 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.021904s.
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/dilated_mask".
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013429s.
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:05:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.786114s.
2025-10-09 23:05:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/PlotBrainmask".
2025-10-09 23:05:04 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:05:05 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.863432s.
2025-10-09 23:05:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/post_n4".
2025-10-09 23:05:06 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:05:07 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.630325s.
2025-10-09 23:05:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/EPI2MNI".
2025-10-09 23:05:08 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:05:08 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:30 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:30 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/SharpenEPI/sub-11_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/SharpenEPI/sub-11_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/SharpenEPI/sub-11_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:27 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:27 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:27 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.029475s.
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:43 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.129022s.
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:45 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.209955s.
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/outliers/mapflow/_outliers0".
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:47 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.635205s.
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/gcor/mapflow/_gcor0".
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:49 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.026798s.
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/dilated_mask".
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015108s.
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.780694s.
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/PlotBrainmask".
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.862501s.
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/68a9c32d476b6d8c53859c472521ed91c117576c/final_masked".
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022206s.
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/68a9c32d476b6d8c53859c472521ed91c117576c/ResampleSegmentation".
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:06:59 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.853228s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_norm".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003999s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/measures/mapflow/_measures0".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.334975s.
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022834s.
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/subtract_mask".
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011891s.
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004015s.
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_bmask".
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003881s.
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/final_masked".
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022385s.
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/821605ac54017e622aca9c671bb4a11c57a4a1c0/ResampleSegmentation".
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:09 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.818931s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_norm".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004159s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/measures/mapflow/_measures0".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:11 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.318823s.
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015957s.
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/subtract_mask".
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009765s.
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003953s.
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_bmask".
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003888s.
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/571f39948bc1edc15928909578720b10aa152e6f/final_masked".
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021449s.
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/571f39948bc1edc15928909578720b10aa152e6f/ResampleSegmentation".
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:19 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.803695s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_norm".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003956s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/measures/mapflow/_measures0".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.319438s.
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017791s.
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/subtract_mask".
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.019172s.
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004153s.
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_bmask".
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003965s.
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/115858bc1f13b5c736f540fb385a05658d128857/final_masked".
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021175s.
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/115858bc1f13b5c736f540fb385a05658d128857/ResampleSegmentation".
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:29 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.81661s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_norm".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004002s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/measures/mapflow/_measures0".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:31 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.345778s.
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011581s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/subtract_mask".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009791s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004011s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_bmask".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003909s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/final_masked".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021602s.
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ResampleSegmentation".
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.811886s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_norm".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003989s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/measures/mapflow/_measures0".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.322528s.
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.00821s.
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/subtract_mask".
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010235s.
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00397s.
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_bmask".
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003881s.
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a6bd62456075108dc8faf3e37e14a1439c096252/final_masked".
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.020341s.
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a6bd62456075108dc8faf3e37e14a1439c096252/ResampleSegmentation".
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:49 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.820029s.
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_norm".
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003912s.
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/measures/mapflow/_measures0".
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.319983s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015491s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/subtract_mask".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011779s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003988s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_bmask".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003937s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/datasink/mapflow/_datasink0".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000549s.
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/68a9c32d476b6d8c53859c472521ed91c117576c/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003521s.
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/parcels".
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017723s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/datasink/mapflow/_datasink0".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000424s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003552s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/parcels".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017974s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/datasink/mapflow/_datasink0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000419s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/571f39948bc1edc15928909578720b10aa152e6f/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003579s.
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/parcels".
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016349s.
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/datasink/mapflow/_datasink0".
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000429s.
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/115858bc1f13b5c736f540fb385a05658d128857/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003525s.
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/parcels".
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01034s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/datasink/mapflow/_datasink0".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00041s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.008793s.
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/parcels".
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:05 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014181s.
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/datasink/mapflow/_datasink0".
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000425s.
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a6bd62456075108dc8faf3e37e14a1439c096252/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003491s.
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/parcels".
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.009371s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.169364s.
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.142457s.
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.287493s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.180592s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:17 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.163879s.
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.280797s.
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/68a9c32d476b6d8c53859c472521ed91c117576c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003937s.
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/821605ac54017e622aca9c671bb4a11c57a4a1c0/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003935s.
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/571f39948bc1edc15928909578720b10aa152e6f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003926s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/115858bc1f13b5c736f540fb385a05658d128857/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003879s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6e3436fd0c504dab20edf43d40f3e6aae2f443e0/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003863s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a6bd62456075108dc8faf3e37e14a1439c096252/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003859s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.423323s.
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.981491s.
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.418555s.
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/4a65739c684b8ae0062057335f9de08194ed7145/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4a65739c684b8ae0062057335f9de08194ed7145/Enhance".
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:39 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.462451s.
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/4a65739c684b8ae0062057335f9de08194ed7145/format_tpm_names".
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:41 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.696405s.
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4a65739c684b8ae0062057335f9de08194ed7145/Grad".
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:43 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.038483s.
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4a65739c684b8ae0062057335f9de08194ed7145/apply_mask".
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:45 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.182688s.
2025-10-09 23:08:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/4a65739c684b8ae0062057335f9de08194ed7145/GradientThreshold".
2025-10-09 23:08:46 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 3.870327s.
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/4a65739c684b8ae0062057335f9de08194ed7145/segmentation".
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 32.811004s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/4a65739c684b8ae0062057335f9de08194ed7145/ArtifactMask".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:09:25 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.054754s.
2025-10-09 23:09:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotHeadmask".
2025-10-09 23:09:26 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.660995s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4a65739c684b8ae0062057335f9de08194ed7145/harmonize".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.50756s.
2025-10-09 23:09:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotSegmentation".
2025-10-09 23:09:30 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 1.858486s.
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4a65739c684b8ae0062057335f9de08194ed7145/provenance".
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.040318s.
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4a65739c684b8ae0062057335f9de08194ed7145/ComputeQI2".
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 9.56885s.
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotAirmask".
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.6510479999999998s.
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/PlotArtmask".
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.686707s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_headmask".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003858s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4a65739c684b8ae0062057335f9de08194ed7145/measures".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.257577s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_segm".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003777s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_noisefit".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.00355s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_airmask".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003593s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/4a65739c684b8ae0062057335f9de08194ed7145/ds_report_artmask".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.00367s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/4a65739c684b8ae0062057335f9de08194ed7145/datasink".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000483s.
2025-10-09 23:09:52 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:09:53 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:09:53 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 04min 46s per subject.
2025-10-09 23:09:53 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 33min 22s).
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