f.hoffstaedter/ds000007-mriqc
1
0
Fork 0
Code Pull requests Packages Activity
ds000007-mriqc/logs/duct/sub-10_2025.10.10T00.36.31-3222745_stdout
Felix Hoffstaedter aaed0a6f80 [DATALAD RUNCMD] Compute MRIQC for sub-10 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-10 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-10",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:13:36 +02:00

1022 lines
194 KiB (Stored with Git Annex)
Text
Raw Permalink Blame History

This file contains invisible Unicode characters

This file contains invisible Unicode characters that are indistinguishable to humans but may be processed differently by a computer. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3219630/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:32 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:33 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:33 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:33 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223631_db6a465a-8e5e-4e78-ad0d-4fc28afd0501.toml.
2025-10-09 22:36:37 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:38 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:38 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:39 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:42 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:46 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/conform".
2025-10-09 22:36:46 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.404277s.
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/78e0583010d494760d7af3ce70c69547060c910b/pick_echo".
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000237s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/provenance/mapflow/_provenance0".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045823s.
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/93332d692da03657097eb763dd10e8ea81ab339c/pick_echo".
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:50 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00012s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/provenance/mapflow/_provenance0".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045831s.
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/pick_echo".
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:52 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000135s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/provenance/mapflow/_provenance0".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045758s.
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5c48e7f16c4f49eb38697a548327b332bddc2c50/pick_echo".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000114s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/provenance/mapflow/_provenance0".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04598s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000116s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045815s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/pick_echo".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000114s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045593s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/pre_clip".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.093791s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/RotationMask".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.463445s.
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotMosaicNoise".
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.091667s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/78e0583010d494760d7af3ce70c69547060c910b/non_steady_state_detector".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.180515s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/93332d692da03657097eb763dd10e8ea81ab339c/non_steady_state_detector".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.174057s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/non_steady_state_detector".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15767s.
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5c48e7f16c4f49eb38697a548327b332bddc2c50/non_steady_state_detector".
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15777s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.158104s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.157864s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/pre_n4".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 51.864915s.
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_background".
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007058s.
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/78e0583010d494760d7af3ce70c69547060c910b/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.130577s.
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/93332d692da03657097eb763dd10e8ea81ab339c/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034245s.
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.11352s.
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5c48e7f16c4f49eb38697a548327b332bddc2c50/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033934s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034161s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.033836s.
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/synthstrip".
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:15 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.125838s.
2025-10-09 22:39:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/78e0583010d494760d7af3ce70c69547060c910b/estimate_hm".
2025-10-09 22:39:16 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:07 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.98661799999999s.
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.28165s.
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/93332d692da03657097eb763dd10e8ea81ab339c/estimate_hm".
2025-10-09 22:41:10 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:01 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.130008s.
2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:43:02 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:04 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.279976s.
2025-10-09 22:43:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/estimate_hm".
2025-10-09 22:43:04 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.662693s.
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:54 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.262927s.
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5c48e7f16c4f49eb38697a548327b332bddc2c50/estimate_hm".
2025-10-09 22:44:56 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.174639s.
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.255722s.
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/estimate_hm".
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:44 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.837326s.
2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.26736s.
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/estimate_hm".
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 113.015558s.
2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:42 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.246997s.
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/post_n4".
2025-10-09 22:50:43 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:50:54 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 11.397196s.
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/smoothness".
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:50:57 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.185866s.
2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotMosaicZoomed".
2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 2.809955s.
2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotBrainmask".
2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.449215s.
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/78e0583010d494760d7af3ce70c69547060c910b/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.862146s.
2025-10-09 22:51:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/78e0583010d494760d7af3ce70c69547060c910b/ComputeFD".
2025-10-09 22:51:15 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:15 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002221s.
2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.358216s.
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/93332d692da03657097eb763dd10e8ea81ab339c/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.881771s.
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/93332d692da03657097eb763dd10e8ea81ab339c/ComputeFD".
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:27 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005011s.
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.387139s.
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.814953s.
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ComputeFD".
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:39 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006099s.
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.381468s.
2025-10-09 22:51:43 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5c48e7f16c4f49eb38697a548327b332bddc2c50/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:43 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.908654s.
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5c48e7f16c4f49eb38697a548327b332bddc2c50/ComputeFD".
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003999s.
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.361718s.
2025-10-09 22:51:55 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:55 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.900524s.
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ComputeFD".
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002135s.
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.363162s.
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.893766s.
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ComputeFD".
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002126s.
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.362196s.
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/final_masked".
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.199134s.
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization".
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:52:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:53:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:53:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:53:25 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:53:25 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:53:25 | INFO | niworkflows | Generating visual report
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 74.821211s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_zoomed".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004041s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_bmask".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00389s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/78e0583010d494760d7af3ce70c69547060c910b/mean/mapflow/_mean0".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.579353s.
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/78e0583010d494760d7af3ce70c69547060c910b/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.424702s.
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/quality/mapflow/_quality0".
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.196011s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/93332d692da03657097eb763dd10e8ea81ab339c/mean/mapflow/_mean0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.559364s.
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/93332d692da03657097eb763dd10e8ea81ab339c/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.417526s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/quality/mapflow/_quality0".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.186763s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/mean/mapflow/_mean0".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.537272s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.404078s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/quality/mapflow/_quality0".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.19188s.
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5c48e7f16c4f49eb38697a548327b332bddc2c50/mean/mapflow/_mean0".
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.539874s.
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5c48e7f16c4f49eb38697a548327b332bddc2c50/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.406856s.
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/quality/mapflow/_quality0".
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.198998s.
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/mean/mapflow/_mean0".
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.541182s.
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/31c275e769bf4be38995743bec7b0e6ac33fc0ae/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.406509s.
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/quality/mapflow/_quality0".
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.206947s.
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/mean/mapflow/_mean0".
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.560503s.
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6c623834fc3c910b0d6dc795dd8f83573a6422c4/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.429604s.
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/quality/mapflow/_quality0".
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:16 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.198233s.
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_norm".
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003755s.
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/pre_clip".
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.241286s.
2025-10-09 22:54:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/SharpenEPI".
2025-10-09 22:54:19 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.465052s.
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.804836s.
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.844473s.
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.85642s.
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/pre_clip".
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.223132s.
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/SharpenEPI".
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.489756s.
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.807542s.
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.822274s.
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.835957s.
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/pre_clip".
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.227221s.
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/SharpenEPI".
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.495409s.
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.812124s.
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.851304s.
2025-10-09 22:54:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.865532s.
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/pre_clip".
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.229504s.
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/SharpenEPI".
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.520071s.
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.814759s.
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.859869s.
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.872329s.
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/pre_clip".
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.23277s.
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/SharpenEPI".
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.499681s.
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.817253s.
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.849611s.
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.847447s.
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/pre_clip".
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.234721s.
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/SharpenEPI".
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5036429999999998s.
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.820378s.
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.859148s.
2025-10-09 22:55:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.869551s.
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/pre_n4".
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.511828s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004177s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004031s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004143s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/pre_n4".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.460003s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004003s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004239s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004031s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/pre_n4".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.451028s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004014s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004257s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004037s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/pre_n4".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4483519999999999s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004124s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004184s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004104s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/pre_n4".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.448756s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004042s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00407s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004091s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/pre_n4".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.428331s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004108s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004005s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004073s.
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/synthstrip".
2025-10-09 22:55:29 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:02 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.784795s.
2025-10-09 22:56:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/synthstrip".
2025-10-09 22:56:03 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:36 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.799816s.
2025-10-09 22:56:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/synthstrip".
2025-10-09 22:56:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.76275s.
2025-10-09 22:57:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/synthstrip".
2025-10-09 22:57:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.750728s.
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/synthstrip".
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:18 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.837106s.
2025-10-09 22:58:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/synthstrip".
2025-10-09 22:58:19 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.763059s.
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/post_n4".
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.666851s.
2025-10-09 22:58:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/EPI2MNI".
2025-10-09 22:58:55 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:58:55 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:19 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/EPI2MNI/stderr.nipype-init).
2025-10-09 22:59:19 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:19 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/SharpenEPI/sub-10_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/SharpenEPI/sub-10_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/SharpenEPI/sub-10_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:15 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:15 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:15 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:29 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.190819s.
2025-10-09 23:00:31 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:31 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.690714s.
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.241101s.
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/outliers/mapflow/_outliers0".
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.724504s.
2025-10-09 23:00:39 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/gcor/mapflow/_gcor0".
2025-10-09 23:00:39 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:40 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.101412s.
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/dilated_mask".
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01598s.
2025-10-09 23:00:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:00:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.831346s.
2025-10-09 23:00:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/PlotBrainmask".
2025-10-09 23:00:45 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.151356s.
2025-10-09 23:00:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/post_n4".
2025-10-09 23:00:47 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.648384s.
2025-10-09 23:00:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/EPI2MNI".
2025-10-09 23:00:49 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:00:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:14 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/EPI2MNI/stderr.nipype-init).
2025-10-09 23:01:14 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:14 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/SharpenEPI/sub-10_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/SharpenEPI/sub-10_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/SharpenEPI/sub-10_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:09 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:09 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:09 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:23 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.340962s.
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.615253s.
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.255444s.
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/outliers/mapflow/_outliers0".
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:32 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.709008s.
2025-10-09 23:02:33 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/gcor/mapflow/_gcor0".
2025-10-09 23:02:33 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.006706s.
2025-10-09 23:02:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/dilated_mask".
2025-10-09 23:02:35 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:35 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016636s.
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.826815s.
2025-10-09 23:02:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/PlotBrainmask".
2025-10-09 23:02:39 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.158627s.
2025-10-09 23:02:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/post_n4".
2025-10-09 23:02:41 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.6871s.
2025-10-09 23:02:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/EPI2MNI".
2025-10-09 23:02:43 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:08 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/EPI2MNI/stderr.nipype-init).
2025-10-09 23:03:08 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:08 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/SharpenEPI/sub-10_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/SharpenEPI/sub-10_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/SharpenEPI/sub-10_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:04 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:04 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:04 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 94.959618s.
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.775508s.
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.241488s.
2025-10-09 23:04:25 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/outliers/mapflow/_outliers0".
2025-10-09 23:04:25 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.69563s.
2025-10-09 23:04:27 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/gcor/mapflow/_gcor0".
2025-10-09 23:04:27 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.988894s.
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/dilated_mask".
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014633s.
2025-10-09 23:04:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.805564s.
2025-10-09 23:04:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/PlotBrainmask".
2025-10-09 23:04:33 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:34 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.159974s.
2025-10-09 23:04:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/post_n4".
2025-10-09 23:04:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:36 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.690051s.
2025-10-09 23:04:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/EPI2MNI".
2025-10-09 23:04:37 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:37 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:02 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/EPI2MNI/stderr.nipype-init).
2025-10-09 23:05:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/SharpenEPI/sub-10_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/SharpenEPI/sub-10_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/SharpenEPI/sub-10_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:05:58 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:05:58 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:05:58 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 95.548495s.
2025-10-09 23:06:13 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:13 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.796928s.
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.253324s.
2025-10-09 23:06:19 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/outliers/mapflow/_outliers0".
2025-10-09 23:06:19 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.72834s.
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/gcor/mapflow/_gcor0".
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:22 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.002889s.
2025-10-09 23:06:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/dilated_mask".
2025-10-09 23:06:23 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:23 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017976s.
2025-10-09 23:06:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.830976s.
2025-10-09 23:06:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/PlotBrainmask".
2025-10-09 23:06:27 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:28 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.162505s.
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/post_n4".
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.670546s.
2025-10-09 23:06:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/EPI2MNI".
2025-10-09 23:06:31 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:31 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:06:56 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:06:56 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/SharpenEPI/sub-10_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/SharpenEPI/sub-10_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/SharpenEPI/sub-10_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:54 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:54 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:54 | INFO | niworkflows | Generating visual report
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 97.345178s.
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.753477s.
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/smoothness/mapflow/_smoothness0".
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.25576s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/outliers/mapflow/_outliers0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.732815s.
2025-10-09 23:08:17 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/gcor/mapflow/_gcor0".
2025-10-09 23:08:17 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.004962s.
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/dilated_mask".
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018904s.
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.83037s.
2025-10-09 23:08:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/PlotBrainmask".
2025-10-09 23:08:23 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.164666s.
2025-10-09 23:08:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/post_n4".
2025-10-09 23:08:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.683661s.
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/EPI2MNI".
2025-10-09 23:08:27 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:08:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:08:51 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:08:51 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/SharpenEPI/sub-10_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/SharpenEPI/sub-10_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/SharpenEPI/sub-10_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:09:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:09:50 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:09:50 | INFO | niworkflows | Generating visual report
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 96.833543s.
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:10:05 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.778506s.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/smoothness/mapflow/_smoothness0".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.255114s.
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/outliers/mapflow/_outliers0".
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.702503s.
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/gcor/mapflow/_gcor0".
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.011363s.
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/dilated_mask".
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:10:15 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01545s.
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.811199s.
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/PlotBrainmask".
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.16949s.
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/78e0583010d494760d7af3ce70c69547060c910b/final_masked".
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02487s.
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/78e0583010d494760d7af3ce70c69547060c910b/ResampleSegmentation".
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.96092s.
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_norm".
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004068s.
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/measures/mapflow/_measures0".
2025-10-09 23:10:25 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.394629s.
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017493s.
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/subtract_mask".
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014161s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004044s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_bmask".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004128s.
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/93332d692da03657097eb763dd10e8ea81ab339c/final_masked".
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023086s.
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/93332d692da03657097eb763dd10e8ea81ab339c/ResampleSegmentation".
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.886597s.
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_norm".
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004082s.
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/measures/mapflow/_measures0".
2025-10-09 23:10:35 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.382463s.
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.013927s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/subtract_mask".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012862s.
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004045s.
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_bmask".
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003976s.
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/final_masked".
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02477s.
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ResampleSegmentation".
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.938389s.
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_norm".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004031s.
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/measures/mapflow/_measures0".
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.351326s.
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014352s.
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/subtract_mask".
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009643s.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004156s.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_bmask".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004018s.
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/final_masked".
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024709s.
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5c48e7f16c4f49eb38697a548327b332bddc2c50/ResampleSegmentation".
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.863562s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_norm".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004135s.
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/measures/mapflow/_measures0".
2025-10-09 23:10:55 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.355027s.
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01368s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/subtract_mask".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014605s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004076s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_bmask".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.008183s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/final_masked".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024706s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ResampleSegmentation".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.902296s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_norm".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00408s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/measures/mapflow/_measures0".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.379766s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010428s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/subtract_mask".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010861s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004094s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_bmask".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004018s.
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/final_masked".
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:11 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024692s.
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ResampleSegmentation".
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.89468s.
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_norm".
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004002s.
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/measures/mapflow/_measures0".
2025-10-09 23:11:15 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.359308s.
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015444s.
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/subtract_mask".
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009549s.
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004059s.
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_bmask".
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004033s.
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/datasink/mapflow/_datasink0".
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000495s.
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/78e0583010d494760d7af3ce70c69547060c910b/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:21 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003543s.
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/parcels".
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020487s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/datasink/mapflow/_datasink0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000403s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/93332d692da03657097eb763dd10e8ea81ab339c/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003425s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/parcels".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020132s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/datasink/mapflow/_datasink0".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00041s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003483s.
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/parcels".
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018432s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/datasink/mapflow/_datasink0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000401s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003438s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/parcels".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017023s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/datasink/mapflow/_datasink0".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000395s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003489s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/parcels".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015549s.
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/datasink/mapflow/_datasink0".
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000417s.
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003545s.
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/parcels".
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:31 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.013739s.
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.47864s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.456119s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.6192090000000001s.
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.453204s.
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.4241869999999999s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.638734s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/78e0583010d494760d7af3ce70c69547060c910b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004115s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/93332d692da03657097eb763dd10e8ea81ab339c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004079s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/bc2c5aec6f2023751eb96ebbf7377a4d4650deb8/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004025s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5c48e7f16c4f49eb38697a548327b332bddc2c50/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004007s.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/31c275e769bf4be38995743bec7b0e6ac33fc0ae/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004012s.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6c623834fc3c910b0d6dc795dd8f83573a6422c4/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004044s.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.761602s.
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.770562s.
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.749444s.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:11:59 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:12:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/Enhance".
2025-10-09 23:12:01 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:02 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.49929s.
2025-10-09 23:12:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/format_tpm_names".
2025-10-09 23:12:03 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:04 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.78106s.
2025-10-09 23:12:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/Grad".
2025-10-09 23:12:05 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:06 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.3246470000000001s.
2025-10-09 23:12:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/apply_mask".
2025-10-09 23:12:07 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:12:07 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.196702s.
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/GradientThreshold".
2025-10-09 23:12:09 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:13 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.116349s.
2025-10-09 23:12:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/segmentation".
2025-10-09 23:12:15 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:12:53 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 37.613439s.
2025-10-09 23:12:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ArtifactMask".
2025-10-09 23:12:53 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:12:54 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.367298s.
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotHeadmask".
2025-10-09 23:12:55 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:57 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.000994s.
2025-10-09 23:12:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/harmonize".
2025-10-09 23:12:59 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:13:00 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.623476s.
2025-10-09 23:13:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotSegmentation".
2025-10-09 23:13:01 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:03 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.260277s.
2025-10-09 23:13:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/provenance".
2025-10-09 23:13:05 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:13:05 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.041998s.
2025-10-09 23:13:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ComputeQI2".
2025-10-09 23:13:05 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:13:16 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.350621s.
2025-10-09 23:13:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotAirmask".
2025-10-09 23:13:17 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.013422s.
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/PlotArtmask".
2025-10-09 23:13:21 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:23 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.017488s.
2025-10-09 23:13:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_headmask".
2025-10-09 23:13:25 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:25 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003718s.
2025-10-09 23:13:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/measures".
2025-10-09 23:13:25 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:13:30 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.291994s.
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_segm".
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003812s.
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_noisefit".
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003772s.
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_airmask".
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003689s.
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/ds_report_artmask".
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003806s.
2025-10-09 23:13:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2e54650b3e6fceace2a6697f0f8f81fe84f5467c/datasink".
2025-10-09 23:13:32 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:13:32 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000465s.
2025-10-09 23:13:33 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:13:34 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:13:34 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 17s per subject.
2025-10-09 23:13:34 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 37min 02s).
----------------------------------------------------------------
View git blame Copy permalink