f.hoffstaedter/ds000007-mriqc
1
0
Fork 0
Code Pull requests Packages Activity
ds000007-mriqc/logs/duct/sub-07_2025.10.10T00.36.33-13287_stdout
Felix Hoffstaedter 71572e7915 [DATALAD RUNCMD] Compute MRIQC for sub-07 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-07 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-07",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:19:40 +02:00

1024 lines
195 KiB (Stored with Git Annex)
Text
Raw Permalink Blame History

This file contains invisible Unicode characters

This file contains invisible Unicode characters that are indistinguishable to humans but may be processed differently by a computer. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3404/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:35 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:35 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:35 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:36 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:36 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223634_32eba2c7-0bed-4031-8ca4-2b3861a36bc2.toml.
2025-10-09 22:36:41 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:42 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:42 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:43 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:48 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:53 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/e92494113a9341a492bac8a588a15bc014db3994/conform".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.501341s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/cf15cd1de85d00d311ee38edbb58df626cc414e5/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000271s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.059252s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/pick_echo".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000162s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.059337s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/1da58f866d1e27eb3e1208a118ffec460af658d3/pick_echo".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000174s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/provenance/mapflow/_provenance0".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.058388s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/pick_echo".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000145s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/provenance/mapflow/_provenance0".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.093346s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/pick_echo".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000146s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/provenance/mapflow/_provenance0".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.060107s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/3c5aa97171620732e3a2e42fdb074cabdd91e304/pick_echo".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000711s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/provenance/mapflow/_provenance0".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.059698s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/e92494113a9341a492bac8a588a15bc014db3994/pre_clip".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 11.21954s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/e92494113a9341a492bac8a588a15bc014db3994/RotationMask".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.579208s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotMosaicNoise".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.451183s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/cf15cd1de85d00d311ee38edbb58df626cc414e5/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.219448s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/non_steady_state_detector".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.221422s.
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/1da58f866d1e27eb3e1208a118ffec460af658d3/non_steady_state_detector".
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.216951s.
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/non_steady_state_detector".
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.218434s.
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/non_steady_state_detector".
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.219574s.
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/3c5aa97171620732e3a2e42fdb074cabdd91e304/non_steady_state_detector".
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.221367s.
2025-10-09 22:37:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/e92494113a9341a492bac8a588a15bc014db3994/pre_n4".
2025-10-09 22:37:40 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 69.235665s.
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_background".
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.009608s.
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/cf15cd1de85d00d311ee38edbb58df626cc414e5/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:50 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.047846s.
2025-10-09 22:38:52 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:52 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:53 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.561596s.
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/1da58f866d1e27eb3e1208a118ffec460af658d3/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:54 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:55 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.5734620000000001s.
2025-10-09 22:38:56 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:56 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:57 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.626659s.
2025-10-09 22:38:58 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:58 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:58 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.048523s.
2025-10-09 22:39:00 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/3c5aa97171620732e3a2e42fdb074cabdd91e304/sanitize/mapflow/_sanitize0".
2025-10-09 22:39:00 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:39:00 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.048007s.
2025-10-09 22:39:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/e92494113a9341a492bac8a588a15bc014db3994/synthstrip".
2025-10-09 22:39:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 51.565331s.
2025-10-09 22:39:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cf15cd1de85d00d311ee38edbb58df626cc414e5/estimate_hm".
2025-10-09 22:39:54 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:24 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 150.276891s.
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:26 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:27 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.57317s.
2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/estimate_hm".
2025-10-09 22:42:28 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:58 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 150.192808s.
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.66096s.
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1da58f866d1e27eb3e1208a118ffec460af658d3/estimate_hm".
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:24 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 142.681956s.
2025-10-09 22:47:26 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:47:26 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:28 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.8349820000000001s.
2025-10-09 22:47:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/estimate_hm".
2025-10-09 22:47:28 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 137.641535s.
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:47 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.5522960000000001s.
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/estimate_hm".
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 130.852699s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.3835060000000001s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3c5aa97171620732e3a2e42fdb074cabdd91e304/estimate_hm".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 129.904476s.
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.35074s.
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/e92494113a9341a492bac8a588a15bc014db3994/post_n4".
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 15.588251s.
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/e92494113a9341a492bac8a588a15bc014db3994/smoothness".
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 3.241928s.
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotMosaicZoomed".
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 4.031017s.
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotBrainmask".
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.596178s.
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cf15cd1de85d00d311ee38edbb58df626cc414e5/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.59153s.
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cf15cd1de85d00d311ee38edbb58df626cc414e5/ComputeFD".
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005584s.
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.436263s.
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.499732999999999s.
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ComputeFD".
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006443s.
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.449892s.
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1da58f866d1e27eb3e1208a118ffec460af658d3/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.579724s.
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/1da58f866d1e27eb3e1208a118ffec460af658d3/ComputeFD".
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006938s.
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.463221s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.492022s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ComputeFD".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002381s.
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:55:38 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:55:39 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.453755s.
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:55:40 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:55:50 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.571349s.
2025-10-09 22:55:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ComputeFD".
2025-10-09 22:55:50 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:55:50 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002429s.
2025-10-09 22:55:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:55:52 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:55:53 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.465057s.
2025-10-09 22:55:54 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3c5aa97171620732e3a2e42fdb074cabdd91e304/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:55:54 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:56:04 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 9.585063s.
2025-10-09 22:56:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3c5aa97171620732e3a2e42fdb074cabdd91e304/ComputeFD".
2025-10-09 22:56:04 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:56:04 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002396s.
2025-10-09 22:56:06 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:56:06 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:56:07 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.443399s.
2025-10-09 22:56:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/e92494113a9341a492bac8a588a15bc014db3994/final_masked".
2025-10-09 22:56:08 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:56:08 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.259599s.
2025-10-09 22:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization".
2025-10-09 22:56:10 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:56:11 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:57:07 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:57:07 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:57:07 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:57:20 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:57:21 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:57:21 | INFO | niworkflows | Generating visual report
2025-10-09 22:57:37 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 86.756268s.
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_zoomed".
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.005103s.
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_bmask".
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004429s.
2025-10-09 22:57:39 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/cf15cd1de85d00d311ee38edbb58df626cc414e5/mean/mapflow/_mean0".
2025-10-09 22:57:39 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:57:39 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.679227s.
2025-10-09 22:57:40 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/cf15cd1de85d00d311ee38edbb58df626cc414e5/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:57:40 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:57:41 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.481544s.
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/quality/mapflow/_quality0".
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.460067s.
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/mean/mapflow/_mean0".
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:57:45 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.607977s.
2025-10-09 22:57:46 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:57:46 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:57:47 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.493582s.
2025-10-09 22:57:48 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/quality/mapflow/_quality0".
2025-10-09 22:57:48 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:57:50 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.431187s.
2025-10-09 22:57:50 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/1da58f866d1e27eb3e1208a118ffec460af658d3/mean/mapflow/_mean0".
2025-10-09 22:57:50 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:57:51 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.612568s.
2025-10-09 22:57:52 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/1da58f866d1e27eb3e1208a118ffec460af658d3/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:57:52 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:57:53 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.488756s.
2025-10-09 22:57:54 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/quality/mapflow/_quality0".
2025-10-09 22:57:54 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:57:56 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.443563s.
2025-10-09 22:57:56 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/mean/mapflow/_mean0".
2025-10-09 22:57:56 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:57:57 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.619419s.
2025-10-09 22:57:58 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:57:58 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:57:59 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.4985s.
2025-10-09 22:58:00 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/quality/mapflow/_quality0".
2025-10-09 22:58:00 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:58:02 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.459336s.
2025-10-09 22:58:02 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/mean/mapflow/_mean0".
2025-10-09 22:58:02 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:58:03 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.620531s.
2025-10-09 22:58:04 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/9996c00673622e569a6463a3bfa2fdc8fa879bdc/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:58:04 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:58:05 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.5002s.
2025-10-09 22:58:06 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/quality/mapflow/_quality0".
2025-10-09 22:58:06 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:58:08 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.436584s.
2025-10-09 22:58:08 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/3c5aa97171620732e3a2e42fdb074cabdd91e304/mean/mapflow/_mean0".
2025-10-09 22:58:08 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:58:09 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.618491s.
2025-10-09 22:58:10 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/3c5aa97171620732e3a2e42fdb074cabdd91e304/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:58:10 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:58:11 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.48229s.
2025-10-09 22:58:12 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/quality/mapflow/_quality0".
2025-10-09 22:58:12 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:58:14 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.449292s.
2025-10-09 22:58:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_norm".
2025-10-09 22:58:14 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:58:14 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004485s.
2025-10-09 22:58:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/pre_clip".
2025-10-09 22:58:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:58:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.257706s.
2025-10-09 22:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/SharpenEPI".
2025-10-09 22:58:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.6651829999999999s.
2025-10-09 22:58:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:58:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.932762s.
2025-10-09 22:58:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:58:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.961017s.
2025-10-09 22:58:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:58:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.974456s.
2025-10-09 22:58:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/pre_clip".
2025-10-09 22:58:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:58:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.26128s.
2025-10-09 22:58:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/SharpenEPI".
2025-10-09 22:58:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.739077s.
2025-10-09 22:58:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:58:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.955201s.
2025-10-09 22:58:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:58:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.971923s.
2025-10-09 22:58:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:58:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.034795s.
2025-10-09 22:58:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/pre_clip".
2025-10-09 22:58:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:58:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.265085s.
2025-10-09 22:58:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/SharpenEPI".
2025-10-09 22:58:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.73455s.
2025-10-09 22:58:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:58:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.919276s.
2025-10-09 22:58:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:58:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.002789s.
2025-10-09 22:58:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:58:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.988633s.
2025-10-09 22:58:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/pre_clip".
2025-10-09 22:58:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:58:45 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.268988s.
2025-10-09 22:58:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/SharpenEPI".
2025-10-09 22:58:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.74319s.
2025-10-09 22:58:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:58:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.935438s.
2025-10-09 22:58:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:58:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.972229s.
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.99233s.
2025-10-09 22:58:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/pre_clip".
2025-10-09 22:58:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:58:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.266059s.
2025-10-09 22:58:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/SharpenEPI".
2025-10-09 22:58:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.732904s.
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:58:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.937112s.
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.980221s.
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.995954s.
2025-10-09 22:59:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/pre_clip".
2025-10-09 22:59:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:59:05 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.296797s.
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/SharpenEPI".
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.764487s.
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.971127s.
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.00002s.
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.084464s.
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/pre_n4".
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.742016s.
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004839s.
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004668s.
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004637s.
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/pre_n4".
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.678916s.
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004837s.
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005016s.
2025-10-09 22:59:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:59:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004821s.
2025-10-09 22:59:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/pre_n4".
2025-10-09 22:59:21 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:22 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.6818469999999999s.
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00465s.
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004661s.
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004636s.
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/pre_n4".
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.673313s.
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004789s.
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004633s.
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004609s.
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/pre_n4".
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.646286s.
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004781s.
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004701s.
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004708s.
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/pre_n4".
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:34 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.664472s.
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004782s.
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004626s.
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004604s.
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/synthstrip".
2025-10-09 22:59:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:00:15 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 38.31873s.
2025-10-09 23:00:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/synthstrip".
2025-10-09 23:00:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.997586s.
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/synthstrip".
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:01:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.972553s.
2025-10-09 23:01:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/synthstrip".
2025-10-09 23:01:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:02:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.957624s.
2025-10-09 23:02:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/synthstrip".
2025-10-09 23:02:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:02:54 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.941549s.
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/synthstrip".
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:03:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 37.874213s.
2025-10-09 23:03:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/post_n4".
2025-10-09 23:03:34 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:03:35 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.853063s.
2025-10-09 23:03:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/EPI2MNI".
2025-10-09 23:03:36 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:03:36 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:58 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:58 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/SharpenEPI/sub-07_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/SharpenEPI/sub-07_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/SharpenEPI/sub-07_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:05:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:05:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:05:01 | INFO | niworkflows | Generating visual report
2025-10-09 23:05:17 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 100.58242s.
2025-10-09 23:05:18 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:05:18 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:05:24 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.500009s.
2025-10-09 23:05:24 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/smoothness/mapflow/_smoothness0".
2025-10-09 23:05:24 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:05:25 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.282058s.
2025-10-09 23:05:26 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/outliers/mapflow/_outliers0".
2025-10-09 23:05:26 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:05:27 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.924205s.
2025-10-09 23:05:28 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/gcor/mapflow/_gcor0".
2025-10-09 23:05:28 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:05:30 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.309663s.
2025-10-09 23:05:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/dilated_mask".
2025-10-09 23:05:30 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:05:30 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018771s.
2025-10-09 23:05:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:05:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:05:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.989756s.
2025-10-09 23:05:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/PlotBrainmask".
2025-10-09 23:05:34 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:05:36 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.24638s.
2025-10-09 23:05:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/post_n4".
2025-10-09 23:05:36 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:05:37 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.862s.
2025-10-09 23:05:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/EPI2MNI".
2025-10-09 23:05:38 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:05:38 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:06:00 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/EPI2MNI/stderr.nipype-init).
2025-10-09 23:06:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:06:00 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/SharpenEPI/sub-07_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/SharpenEPI/sub-07_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/SharpenEPI/sub-07_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:04 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:04 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:04 | INFO | niworkflows | Generating visual report
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 101.801459s.
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.483865s.
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/smoothness/mapflow/_smoothness0".
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:07:27 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.282643s.
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/outliers/mapflow/_outliers0".
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:07:29 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.918364s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/gcor/mapflow/_gcor0".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.143592s.
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/dilated_mask".
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:07:33 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016585s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.974011s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/PlotBrainmask".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.265332s.
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/post_n4".
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:07:39 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.865384s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/EPI2MNI".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:07:40 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:08:01 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/EPI2MNI/stderr.nipype-init).
2025-10-09 23:08:01 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:08:01 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/SharpenEPI/sub-07_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/SharpenEPI/sub-07_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/SharpenEPI/sub-07_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:09:05 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:09:05 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:09:05 | INFO | niworkflows | Generating visual report
2025-10-09 23:09:22 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 101.445702s.
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.445369s.
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/smoothness/mapflow/_smoothness0".
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.271024s.
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/outliers/mapflow/_outliers0".
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:09:31 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.915899s.
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/gcor/mapflow/_gcor0".
2025-10-09 23:09:33 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:09:34 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.142426s.
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/dilated_mask".
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:09:35 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01269s.
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:09:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:09:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.978771s.
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/PlotBrainmask".
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.262264s.
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/post_n4".
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.837913s.
2025-10-09 23:09:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/EPI2MNI".
2025-10-09 23:09:43 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:09:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:10:03 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/EPI2MNI/stderr.nipype-init).
2025-10-09 23:10:03 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:10:03 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/SharpenEPI/sub-07_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/SharpenEPI/sub-07_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/SharpenEPI/sub-07_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:11:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:11:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:11:08 | INFO | niworkflows | Generating visual report
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 102.240088s.
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:11:32 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.459273s.
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/smoothness/mapflow/_smoothness0".
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.290181s.
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/outliers/mapflow/_outliers0".
2025-10-09 23:11:35 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:11:36 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.909592s.
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/gcor/mapflow/_gcor0".
2025-10-09 23:11:37 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:11:38 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.15096s.
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/dilated_mask".
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.018139s.
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:11:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:11:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.964716s.
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/PlotBrainmask".
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:44 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.262063s.
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/post_n4".
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.873706s.
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/EPI2MNI".
2025-10-09 23:11:47 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:11:47 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:12:08 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/EPI2MNI/stderr.nipype-init).
2025-10-09 23:12:08 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:12:08 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/SharpenEPI/sub-07_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/SharpenEPI/sub-07_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/SharpenEPI/sub-07_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:13:12 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:13:12 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:13:12 | INFO | niworkflows | Generating visual report
2025-10-09 23:13:29 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 102.059559s.
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:13:31 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:13:36 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.496549s.
2025-10-09 23:13:37 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/smoothness/mapflow/_smoothness0".
2025-10-09 23:13:37 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:13:37 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.283417s.
2025-10-09 23:13:39 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/outliers/mapflow/_outliers0".
2025-10-09 23:13:39 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:13:40 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.910577s.
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/gcor/mapflow/_gcor0".
2025-10-09 23:13:41 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:13:42 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.139986s.
2025-10-09 23:13:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/dilated_mask".
2025-10-09 23:13:43 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:13:43 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.019446s.
2025-10-09 23:13:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:13:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:13:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.982497s.
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/PlotBrainmask".
2025-10-09 23:13:47 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:48 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.275924s.
2025-10-09 23:13:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/post_n4".
2025-10-09 23:13:49 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:13:50 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.869819s.
2025-10-09 23:13:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/EPI2MNI".
2025-10-09 23:13:51 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:13:51 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:14:13 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/EPI2MNI/stderr.nipype-init).
2025-10-09 23:14:13 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:14:13 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/SharpenEPI/sub-07_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/SharpenEPI/sub-07_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/SharpenEPI/sub-07_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:15:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:15:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:15:17 | INFO | niworkflows | Generating visual report
2025-10-09 23:15:34 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 103.146635s.
2025-10-09 23:15:35 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:15:35 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:15:40 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.435975s.
2025-10-09 23:15:41 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/smoothness/mapflow/_smoothness0".
2025-10-09 23:15:41 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:15:41 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.273725s.
2025-10-09 23:15:43 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/outliers/mapflow/_outliers0".
2025-10-09 23:15:43 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:15:44 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.928765s.
2025-10-09 23:15:45 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/gcor/mapflow/_gcor0".
2025-10-09 23:15:45 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:15:46 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.138798s.
2025-10-09 23:15:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/dilated_mask".
2025-10-09 23:15:47 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:15:47 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016538s.
2025-10-09 23:15:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:15:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:15:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.970543s.
2025-10-09 23:15:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/PlotBrainmask".
2025-10-09 23:15:51 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:15:52 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.249536s.
2025-10-09 23:15:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/final_masked".
2025-10-09 23:15:53 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:15:53 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028889s.
2025-10-09 23:15:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cf15cd1de85d00d311ee38edbb58df626cc414e5/ResampleSegmentation".
2025-10-09 23:15:55 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:15:56 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.185432s.
2025-10-09 23:15:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_norm".
2025-10-09 23:15:57 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:15:57 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004689s.
2025-10-09 23:15:57 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/measures/mapflow/_measures0".
2025-10-09 23:15:57 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:15:57 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.454741s.
2025-10-09 23:15:59 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/timeseries/mapflow/_timeseries0".
2025-10-09 23:15:59 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:15:59 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.026501s.
2025-10-09 23:16:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/subtract_mask".
2025-10-09 23:16:01 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:16:01 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008612s.
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004667s.
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_bmask".
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004626s.
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/final_masked".
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:16:03 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02934s.
2025-10-09 23:16:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ResampleSegmentation".
2025-10-09 23:16:05 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:16:06 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.129627s.
2025-10-09 23:16:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_norm".
2025-10-09 23:16:07 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:07 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00474s.
2025-10-09 23:16:07 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/measures/mapflow/_measures0".
2025-10-09 23:16:07 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:16:07 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.442389s.
2025-10-09 23:16:09 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/timeseries/mapflow/_timeseries0".
2025-10-09 23:16:09 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:16:09 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.009416s.
2025-10-09 23:16:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/subtract_mask".
2025-10-09 23:16:11 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:16:11 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015328s.
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004794s.
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_bmask".
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004642s.
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/final_masked".
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:16:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025592s.
2025-10-09 23:16:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/1da58f866d1e27eb3e1208a118ffec460af658d3/ResampleSegmentation".
2025-10-09 23:16:15 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:16:16 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.131069s.
2025-10-09 23:16:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_norm".
2025-10-09 23:16:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004675s.
2025-10-09 23:16:17 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/measures/mapflow/_measures0".
2025-10-09 23:16:17 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:16:17 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.446878s.
2025-10-09 23:16:19 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/timeseries/mapflow/_timeseries0".
2025-10-09 23:16:19 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:16:19 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016484s.
2025-10-09 23:16:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/subtract_mask".
2025-10-09 23:16:21 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:16:21 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016918s.
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004727s.
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_bmask".
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004613s.
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/final_masked".
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:16:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027152s.
2025-10-09 23:16:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ResampleSegmentation".
2025-10-09 23:16:25 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:16:26 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.123018s.
2025-10-09 23:16:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_norm".
2025-10-09 23:16:27 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:27 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004633s.
2025-10-09 23:16:27 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/measures/mapflow/_measures0".
2025-10-09 23:16:27 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:16:27 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.424124s.
2025-10-09 23:16:29 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/timeseries/mapflow/_timeseries0".
2025-10-09 23:16:29 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:16:29 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.021464s.
2025-10-09 23:16:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/subtract_mask".
2025-10-09 23:16:31 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:16:31 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015707s.
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004701s.
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_bmask".
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004586s.
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/final_masked".
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:16:33 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028968s.
2025-10-09 23:16:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ResampleSegmentation".
2025-10-09 23:16:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:16:36 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.104526s.
2025-10-09 23:16:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_norm".
2025-10-09 23:16:37 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:37 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.006898s.
2025-10-09 23:16:37 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/measures/mapflow/_measures0".
2025-10-09 23:16:37 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:16:37 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.424683s.
2025-10-09 23:16:39 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/timeseries/mapflow/_timeseries0".
2025-10-09 23:16:39 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:16:39 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014217s.
2025-10-09 23:16:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/subtract_mask".
2025-10-09 23:16:41 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:16:41 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.019811s.
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004738s.
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_bmask".
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004647s.
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/final_masked".
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:16:43 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.028306s.
2025-10-09 23:16:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3c5aa97171620732e3a2e42fdb074cabdd91e304/ResampleSegmentation".
2025-10-09 23:16:45 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:16:46 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.128941s.
2025-10-09 23:16:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_norm".
2025-10-09 23:16:47 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:47 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004701s.
2025-10-09 23:16:47 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/measures/mapflow/_measures0".
2025-10-09 23:16:47 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:16:47 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.445276s.
2025-10-09 23:16:49 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/timeseries/mapflow/_timeseries0".
2025-10-09 23:16:49 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:16:49 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016122s.
2025-10-09 23:16:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/subtract_mask".
2025-10-09 23:16:51 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:16:51 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016087s.
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004803s.
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_bmask".
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004623s.
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/datasink/mapflow/_datasink0".
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000578s.
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004049s.
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/parcels".
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:16:53 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.023488s.
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/datasink/mapflow/_datasink0".
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000452s.
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00397s.
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/parcels".
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:16:55 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.022818s.
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/datasink/mapflow/_datasink0".
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000451s.
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003956s.
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/parcels".
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:16:57 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020247s.
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/datasink/mapflow/_datasink0".
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000444s.
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003986s.
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/parcels".
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:16:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018976s.
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/datasink/mapflow/_datasink0".
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000483s.
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003971s.
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/parcels".
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:17:01 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01719s.
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/datasink/mapflow/_datasink0".
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00045s.
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004004s.
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/parcels".
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:17:03 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014795s.
2025-10-09 23:17:05 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:17:05 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:17:06 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.663039s.
2025-10-09 23:17:07 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:17:07 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:17:08 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.686077s.
2025-10-09 23:17:09 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:17:09 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:17:11 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.811578s.
2025-10-09 23:17:11 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:17:11 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:17:12 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.7252960000000002s.
2025-10-09 23:17:13 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:17:13 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:17:14 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.679367s.
2025-10-09 23:17:15 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:17:15 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.8555540000000001s.
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cf15cd1de85d00d311ee38edbb58df626cc414e5/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00476s.
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3b33874da3e698a2c3d047104b0dcec18aa5ba6f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004622s.
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/1da58f866d1e27eb3e1208a118ffec460af658d3/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004723s.
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b3ae62d67117c6c3c81ca4708dc77dcc9606f115/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004708s.
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/9996c00673622e569a6463a3bfa2fdc8fa879bdc/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004883s.
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3c5aa97171620732e3a2e42fdb074cabdd91e304/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:17:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004638s.
2025-10-09 23:17:18 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:17:18 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:17:23 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 5.148753s.
2025-10-09 23:17:25 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:17:25 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:17:30 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 5.178985s.
2025-10-09 23:17:31 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:17:31 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:17:36 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 5.15803s.
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/e92494113a9341a492bac8a588a15bc014db3994/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:17:37 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:17:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/e92494113a9341a492bac8a588a15bc014db3994/Enhance".
2025-10-09 23:17:39 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:17:39 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.562178s.
2025-10-09 23:17:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/e92494113a9341a492bac8a588a15bc014db3994/format_tpm_names".
2025-10-09 23:17:41 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:17:42 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 1.114835s.
2025-10-09 23:17:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/e92494113a9341a492bac8a588a15bc014db3994/Grad".
2025-10-09 23:17:43 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:17:44 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.541862s.
2025-10-09 23:17:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/e92494113a9341a492bac8a588a15bc014db3994/apply_mask".
2025-10-09 23:17:45 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:17:45 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.255284s.
2025-10-09 23:17:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/e92494113a9341a492bac8a588a15bc014db3994/GradientThreshold".
2025-10-09 23:17:47 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:17:52 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.924008s.
2025-10-09 23:17:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/e92494113a9341a492bac8a588a15bc014db3994/segmentation".
2025-10-09 23:17:53 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:18:55 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 61.987429s.
2025-10-09 23:18:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/e92494113a9341a492bac8a588a15bc014db3994/ArtifactMask".
2025-10-09 23:18:57 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:18:58 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.531924s.
2025-10-09 23:18:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotHeadmask".
2025-10-09 23:18:59 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:19:01 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.206892s.
2025-10-09 23:19:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/e92494113a9341a492bac8a588a15bc014db3994/harmonize".
2025-10-09 23:19:03 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:19:03 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.734461s.
2025-10-09 23:19:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotSegmentation".
2025-10-09 23:19:05 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:19:07 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.594491s.
2025-10-09 23:19:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/e92494113a9341a492bac8a588a15bc014db3994/provenance".
2025-10-09 23:19:09 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:19:09 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.048499s.
2025-10-09 23:19:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/e92494113a9341a492bac8a588a15bc014db3994/ComputeQI2".
2025-10-09 23:19:09 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:19:20 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 11.371024s.
2025-10-09 23:19:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotAirmask".
2025-10-09 23:19:21 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:19:23 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.216069s.
2025-10-09 23:19:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/PlotArtmask".
2025-10-09 23:19:25 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:19:27 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.241647s.
2025-10-09 23:19:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_headmask".
2025-10-09 23:19:29 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:19:29 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.00452s.
2025-10-09 23:19:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/e92494113a9341a492bac8a588a15bc014db3994/measures".
2025-10-09 23:19:29 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:19:34 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.830216s.
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_segm".
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004298s.
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_noisefit".
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004228s.
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_airmask".
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004377s.
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/e92494113a9341a492bac8a588a15bc014db3994/ds_report_artmask".
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004222s.
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/e92494113a9341a492bac8a588a15bc014db3994/datasink".
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:19:35 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000502s.
2025-10-09 23:19:37 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:19:38 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:19:38 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 09s per subject.
2025-10-09 23:19:38 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 43min 04s).
----------------------------------------------------------------
View git blame Copy permalink