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ds000007-mriqc/logs/duct/sub-06_2025.10.10T00.36.42-2961718_stdout
Felix Hoffstaedter c8c3ba64f8 [DATALAD RUNCMD] Compute MRIQC for sub-06 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-06 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-06",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:09:55 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2957993/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:44 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:44 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:44 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:45 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:45 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223643_6c56470d-adff-419b-811c-38f3e2eee75d.toml.
2025-10-09 22:36:48 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:49 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:50 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:50 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:54 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:57 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/de03227a25b674dbcd018fab5715c91742f1243c/conform".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.342858s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/pick_echo".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000241s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/provenance/mapflow/_provenance0".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04452s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/06c6ba03a769710b144a70082293e83467eb9530/pick_echo".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000126s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/provenance/mapflow/_provenance0".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044509s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/pick_echo".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000131s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/provenance/mapflow/_provenance0".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044701s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/515ad3b581af5833efebc84205337940d17a7dc0/pick_echo".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000126s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/provenance/mapflow/_provenance0".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044573s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/440b919653b95e8d8df41bd3aad0835f6e9f001c/pick_echo".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000115s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/provenance/mapflow/_provenance0".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044256s.
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b58ca4a46dd847ee2042a46d6294a93495967cca/pick_echo".
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/provenance/mapflow/_provenance0".
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044384s.
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/de03227a25b674dbcd018fab5715c91742f1243c/pre_clip".
2025-10-09 22:37:12 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.435807s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/de03227a25b674dbcd018fab5715c91742f1243c/RotationMask".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.415209s.
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotMosaicNoise".
2025-10-09 22:37:22 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.873512s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153876s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/06c6ba03a769710b144a70082293e83467eb9530/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.151711s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/non_steady_state_detector".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152141s.
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/515ad3b581af5833efebc84205337940d17a7dc0/non_steady_state_detector".
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.153104s.
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/440b919653b95e8d8df41bd3aad0835f6e9f001c/non_steady_state_detector".
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.15116s.
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b58ca4a46dd847ee2042a46d6294a93495967cca/non_steady_state_detector".
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.152009s.
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/de03227a25b674dbcd018fab5715c91742f1243c/pre_n4".
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 54.503454s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_background".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.00725s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.089802s.
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/06c6ba03a769710b144a70082293e83467eb9530/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.080246s.
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.08991s.
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/515ad3b581af5833efebc84205337940d17a7dc0/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.096172s.
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/440b919653b95e8d8df41bd3aad0835f6e9f001c/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.03266s.
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b58ca4a46dd847ee2042a46d6294a93495967cca/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.104739s.
2025-10-09 22:38:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/de03227a25b674dbcd018fab5715c91742f1243c/synthstrip".
2025-10-09 22:38:46 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 31.543116s.
2025-10-09 22:39:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/estimate_hm".
2025-10-09 22:39:18 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:47 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 89.240623s.
2025-10-09 22:40:48 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:40:48 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:40:49 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.992681s.
2025-10-09 22:40:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/06c6ba03a769710b144a70082293e83467eb9530/estimate_hm".
2025-10-09 22:40:50 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 89.661993s.
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:20 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:21 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.982576s.
2025-10-09 22:42:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/estimate_hm".
2025-10-09 22:42:22 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.235039s.
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:43:54 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:55 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.975408s.
2025-10-09 22:43:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/515ad3b581af5833efebc84205337940d17a7dc0/estimate_hm".
2025-10-09 22:43:56 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.609307s.
2025-10-09 22:45:28 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:28 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:29 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.973416s.
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/440b919653b95e8d8df41bd3aad0835f6e9f001c/estimate_hm".
2025-10-09 22:45:30 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:03 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 92.805277s.
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:47:04 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:05 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.981827s.
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b58ca4a46dd847ee2042a46d6294a93495967cca/estimate_hm".
2025-10-09 22:47:06 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:36 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.452809s.
2025-10-09 22:48:38 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:38 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.996373s.
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/de03227a25b674dbcd018fab5715c91742f1243c/post_n4".
2025-10-09 22:48:40 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 12.808871s.
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/de03227a25b674dbcd018fab5715c91742f1243c/smoothness".
2025-10-09 22:48:54 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:48:56 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.175185s.
2025-10-09 22:48:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotMosaicZoomed".
2025-10-09 22:48:58 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:01 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.296167s.
2025-10-09 22:49:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotBrainmask".
2025-10-09 22:49:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:49:04 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.97509s.
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:06 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:13 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.279993s.
2025-10-09 22:49:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ComputeFD".
2025-10-09 22:49:14 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:14 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00544s.
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:16 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.367346s.
2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/06c6ba03a769710b144a70082293e83467eb9530/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.217677s.
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/06c6ba03a769710b144a70082293e83467eb9530/ComputeFD".
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:26 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00182s.
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:28 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.369482s.
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:37 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.285984s.
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ComputeFD".
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:38 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005798s.
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:40 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.345228s.
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/515ad3b581af5833efebc84205337940d17a7dc0/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.287184s.
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/515ad3b581af5833efebc84205337940d17a7dc0/ComputeFD".
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:50 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001828s.
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:52 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.353929s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/440b919653b95e8d8df41bd3aad0835f6e9f001c/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.331605s.
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/440b919653b95e8d8df41bd3aad0835f6e9f001c/ComputeFD".
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:02 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005286s.
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:04 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.380212s.
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b58ca4a46dd847ee2042a46d6294a93495967cca/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.292172s.
2025-10-09 22:50:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b58ca4a46dd847ee2042a46d6294a93495967cca/ComputeFD".
2025-10-09 22:50:14 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:14 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001831s.
2025-10-09 22:50:16 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:16 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:16 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.364665s.
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/de03227a25b674dbcd018fab5715c91742f1243c/final_masked".
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:50:18 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.181816s.
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization".
2025-10-09 22:50:20 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:50:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:50:56 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:50:56 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:51:05 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:51:05 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:51:05 | INFO | niworkflows | Generating visual report
2025-10-09 22:51:17 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 56.858071s.
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_zoomed".
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003816s.
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_bmask".
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003813s.
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/mean/mapflow/_mean0".
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.581558s.
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.382807s.
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/quality/mapflow/_quality0".
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.264368s.
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/06c6ba03a769710b144a70082293e83467eb9530/mean/mapflow/_mean0".
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.535208s.
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/06c6ba03a769710b144a70082293e83467eb9530/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.380441s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/quality/mapflow/_quality0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:29 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.236233s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/mean/mapflow/_mean0".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.521943s.
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f6c6f83d3334766089cc6fadd11209176dd4fe5a/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.385084s.
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/quality/mapflow/_quality0".
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.233695s.
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/515ad3b581af5833efebc84205337940d17a7dc0/mean/mapflow/_mean0".
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.514487s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/515ad3b581af5833efebc84205337940d17a7dc0/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.382757s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/quality/mapflow/_quality0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:41 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.242203s.
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/440b919653b95e8d8df41bd3aad0835f6e9f001c/mean/mapflow/_mean0".
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:43 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.519917s.
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/440b919653b95e8d8df41bd3aad0835f6e9f001c/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.383416s.
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/quality/mapflow/_quality0".
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.274558s.
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b58ca4a46dd847ee2042a46d6294a93495967cca/mean/mapflow/_mean0".
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:49 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.53735s.
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b58ca4a46dd847ee2042a46d6294a93495967cca/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.406769s.
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/quality/mapflow/_quality0".
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:53 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.243421s.
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_norm".
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003681s.
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/pre_clip".
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.210188s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/SharpenEPI".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.480195s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.81102s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.8607s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.867433s.
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/pre_clip".
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.213869s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/SharpenEPI".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5187439999999999s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.810871s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.85869s.
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.855849s.
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/pre_clip".
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.217331s.
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/SharpenEPI".
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.512839s.
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.811119s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.859493s.
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.873184s.
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/pre_clip".
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.234337s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/SharpenEPI".
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.540502s.
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.817813s.
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.873371s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.878469s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/pre_clip".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.223094s.
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/SharpenEPI".
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5273029999999999s.
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.822521s.
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.871123s.
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.879886s.
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/pre_clip".
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.224704s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/SharpenEPI".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.524073s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.801668s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.854039s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.879693s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/pre_n4".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.526656s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004239s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004021s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004028s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/pre_n4".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.460398s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004128s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003961s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003972s.
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/pre_n4".
2025-10-09 22:52:58 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.454246s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004061s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004105s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003989s.
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/pre_n4".
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.492167s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003966s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00397s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003953s.
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/pre_n4".
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.465139s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003962s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004138s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004116s.
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/pre_n4".
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.463443s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003967s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004094s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003945s.
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/synthstrip".
2025-10-09 22:53:06 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:53:33 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.773759s.
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/synthstrip".
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.929811s.
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/synthstrip".
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.806756s.
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/synthstrip".
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.849199s.
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/synthstrip".
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.769753s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/synthstrip".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:53 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.771776s.
2025-10-09 22:55:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/post_n4".
2025-10-09 22:55:54 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:55 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.675526s.
2025-10-09 22:55:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/EPI2MNI".
2025-10-09 22:55:56 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:55:56 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:56:12 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/EPI2MNI/stderr.nipype-init).
2025-10-09 22:56:12 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:56:12 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/SharpenEPI/sub-06_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/SharpenEPI/sub-06_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/SharpenEPI/sub-06_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:57:11 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:57:11 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:57:11 | INFO | niworkflows | Generating visual report
2025-10-09 22:57:23 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 86.814371s.
2025-10-09 22:57:24 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:57:24 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.076279s.
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/smoothness/mapflow/_smoothness0".
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.231078s.
2025-10-09 22:57:32 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/outliers/mapflow/_outliers0".
2025-10-09 22:57:32 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:57:33 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.73508s.
2025-10-09 22:57:34 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/gcor/mapflow/_gcor0".
2025-10-09 22:57:34 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:57:35 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.208392s.
2025-10-09 22:57:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/dilated_mask".
2025-10-09 22:57:36 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:57:36 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.0134s.
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:57:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:57:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.81405s.
2025-10-09 22:57:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/PlotBrainmask".
2025-10-09 22:57:40 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:57:41 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.910684s.
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/post_n4".
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:57:43 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.690085s.
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/EPI2MNI".
2025-10-09 22:57:44 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:57:44 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:58:01 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/EPI2MNI/stderr.nipype-init).
2025-10-09 22:58:01 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:58:01 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/SharpenEPI/sub-06_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/SharpenEPI/sub-06_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/SharpenEPI/sub-06_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:59:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:59:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:59:01 | INFO | niworkflows | Generating visual report
2025-10-09 22:59:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 88.462005s.
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.059114s.
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/smoothness/mapflow/_smoothness0".
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.229005s.
2025-10-09 22:59:22 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/outliers/mapflow/_outliers0".
2025-10-09 22:59:22 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:59:23 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.719358s.
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/gcor/mapflow/_gcor0".
2025-10-09 22:59:24 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:59:25 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.05393s.
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/dilated_mask".
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:59:26 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015083s.
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:59:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.79823s.
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/PlotBrainmask".
2025-10-09 22:59:30 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:59:31 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.916249s.
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/post_n4".
2025-10-09 22:59:32 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:33 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.684483s.
2025-10-09 22:59:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/EPI2MNI".
2025-10-09 22:59:34 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:34 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:52 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:52 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/SharpenEPI/sub-06_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/SharpenEPI/sub-06_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/SharpenEPI/sub-06_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:50 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:50 | INFO | niworkflows | Generating visual report
2025-10-09 23:01:01 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 86.880477s.
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.116985s.
2025-10-09 23:01:08 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/smoothness/mapflow/_smoothness0".
2025-10-09 23:01:08 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:01:08 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.233618s.
2025-10-09 23:01:10 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/outliers/mapflow/_outliers0".
2025-10-09 23:01:10 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:01:11 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.713745s.
2025-10-09 23:01:12 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/gcor/mapflow/_gcor0".
2025-10-09 23:01:12 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:01:13 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.059915s.
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/dilated_mask".
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:01:14 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015533s.
2025-10-09 23:01:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:01:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:01:17 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.829363s.
2025-10-09 23:01:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/PlotBrainmask".
2025-10-09 23:01:18 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:01:19 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.907137s.
2025-10-09 23:01:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/post_n4".
2025-10-09 23:01:20 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:01:21 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.687568s.
2025-10-09 23:01:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/EPI2MNI".
2025-10-09 23:01:22 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:22 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:41 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/SharpenEPI/sub-06_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/SharpenEPI/sub-06_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/SharpenEPI/sub-06_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:40 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:40 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:40 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.377096s.
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:56 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.065317s.
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:58 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.230642s.
2025-10-09 23:03:00 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/outliers/mapflow/_outliers0".
2025-10-09 23:03:00 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:03:01 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.724969s.
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/gcor/mapflow/_gcor0".
2025-10-09 23:03:02 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:03:03 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.064369s.
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/dilated_mask".
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:03:04 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.012664s.
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:03:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:03:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.796642s.
2025-10-09 23:03:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/PlotBrainmask".
2025-10-09 23:03:08 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:03:09 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.901145s.
2025-10-09 23:03:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/post_n4".
2025-10-09 23:03:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:03:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.684055s.
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/EPI2MNI".
2025-10-09 23:03:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:03:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:32 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/EPI2MNI/stderr.nipype-init).
2025-10-09 23:03:32 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:32 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/SharpenEPI/sub-06_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/SharpenEPI/sub-06_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/SharpenEPI/sub-06_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:30 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.523026s.
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:46 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.03558s.
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:48 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:49 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.229188s.
2025-10-09 23:04:50 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/outliers/mapflow/_outliers0".
2025-10-09 23:04:50 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:51 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.7152s.
2025-10-09 23:04:52 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/gcor/mapflow/_gcor0".
2025-10-09 23:04:52 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:53 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.067739s.
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/dilated_mask".
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:54 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015654s.
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:57 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.816088s.
2025-10-09 23:04:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/PlotBrainmask".
2025-10-09 23:04:58 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:59 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.910339s.
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/post_n4".
2025-10-09 23:05:00 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:05:01 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.694363s.
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/EPI2MNI".
2025-10-09 23:05:02 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:05:02 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:20 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:20 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/SharpenEPI/sub-06_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/SharpenEPI/sub-06_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/SharpenEPI/sub-06_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:20 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:20 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:20 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:31 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 88.750247s.
2025-10-09 23:06:32 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:32 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:36 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.993151s.
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:39 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.225535s.
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/outliers/mapflow/_outliers0".
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:41 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.713236s.
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/gcor/mapflow/_gcor0".
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:43 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.060298s.
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/dilated_mask".
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015035s.
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:47 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.821516s.
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/PlotBrainmask".
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:49 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.916517s.
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/final_masked".
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.019915s.
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ResampleSegmentation".
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:06:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.923483s.
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_norm".
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.009888s.
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/measures/mapflow/_measures0".
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:06:55 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.360703s.
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/timeseries/mapflow/_timeseries0".
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018054s.
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/subtract_mask".
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010446s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003969s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_bmask".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00395s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/06c6ba03a769710b144a70082293e83467eb9530/final_masked".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:01 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023459s.
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/06c6ba03a769710b144a70082293e83467eb9530/ResampleSegmentation".
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.923369s.
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_norm".
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003937s.
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/measures/mapflow/_measures0".
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:05 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.350339s.
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014137s.
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/subtract_mask".
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008297s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004091s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_bmask".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003862s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/final_masked".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022732s.
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ResampleSegmentation".
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:13 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.884428s.
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_norm".
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004014s.
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/measures/mapflow/_measures0".
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:15 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.336246s.
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016164s.
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/subtract_mask".
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014003s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004053s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_bmask".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003892s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/515ad3b581af5833efebc84205337940d17a7dc0/final_masked".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:21 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02269s.
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/515ad3b581af5833efebc84205337940d17a7dc0/ResampleSegmentation".
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:23 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.910555s.
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_norm".
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004082s.
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/measures/mapflow/_measures0".
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:25 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.336471s.
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014044s.
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/subtract_mask".
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011395s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003941s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_bmask".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004002s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/final_masked".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022733s.
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/440b919653b95e8d8df41bd3aad0835f6e9f001c/ResampleSegmentation".
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.953328s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_norm".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004032s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/measures/mapflow/_measures0".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:35 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.340099s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018518s.
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/subtract_mask".
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009817s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004024s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_bmask".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00389s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/final_masked".
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022378s.
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b58ca4a46dd847ee2042a46d6294a93495967cca/ResampleSegmentation".
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:43 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.904267s.
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_norm".
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003931s.
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/measures/mapflow/_measures0".
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.360063s.
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01416s.
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/subtract_mask".
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009843s.
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00402s.
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_bmask".
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003865s.
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/datasink/mapflow/_datasink0".
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000561s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003692s.
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/parcels".
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016941s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/datasink/mapflow/_datasink0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000425s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/06c6ba03a769710b144a70082293e83467eb9530/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003547s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/parcels".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018031s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/datasink/mapflow/_datasink0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000408s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00352s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/parcels".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:55 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015419s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/datasink/mapflow/_datasink0".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.0004s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/515ad3b581af5833efebc84205337940d17a7dc0/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003441s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/parcels".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015228s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/datasink/mapflow/_datasink0".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00041s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003518s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/parcels".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.009577s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/datasink/mapflow/_datasink0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000408s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003627s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/parcels".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.012783s.
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.2620689999999999s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.214618s.
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.34295s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.187414s.
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.205896s.
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.373423s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/3dc16abbf3cf3f1ea8f942755d01cd4b774016ab/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003989s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/06c6ba03a769710b144a70082293e83467eb9530/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003803s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f6c6f83d3334766089cc6fadd11209176dd4fe5a/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003858s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/515ad3b581af5833efebc84205337940d17a7dc0/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003926s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/440b919653b95e8d8df41bd3aad0835f6e9f001c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003864s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b58ca4a46dd847ee2042a46d6294a93495967cca/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003828s.
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:19 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.8956619999999997s.
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.93032s.
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.8701600000000003s.
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/de03227a25b674dbcd018fab5715c91742f1243c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/de03227a25b674dbcd018fab5715c91742f1243c/Enhance".
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:33 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.449207s.
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/de03227a25b674dbcd018fab5715c91742f1243c/format_tpm_names".
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:35 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.832955s.
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/de03227a25b674dbcd018fab5715c91742f1243c/Grad".
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:37 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.019206s.
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/de03227a25b674dbcd018fab5715c91742f1243c/apply_mask".
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.18175s.
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/de03227a25b674dbcd018fab5715c91742f1243c/GradientThreshold".
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 3.7943249999999997s.
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/de03227a25b674dbcd018fab5715c91742f1243c/segmentation".
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 39.021351s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/de03227a25b674dbcd018fab5715c91742f1243c/ArtifactMask".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:09:25 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.044039s.
2025-10-09 23:09:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotHeadmask".
2025-10-09 23:09:26 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.627659s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/de03227a25b674dbcd018fab5715c91742f1243c/harmonize".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:09:29 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.472568s.
2025-10-09 23:09:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotSegmentation".
2025-10-09 23:09:30 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 1.846142s.
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/de03227a25b674dbcd018fab5715c91742f1243c/provenance".
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.040231s.
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/de03227a25b674dbcd018fab5715c91742f1243c/ComputeQI2".
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:09:41 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 8.794134s.
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotAirmask".
2025-10-09 23:09:42 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.666895s.
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/PlotArtmask".
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.68967s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_headmask".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003652s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/de03227a25b674dbcd018fab5715c91742f1243c/measures".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.261179s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_segm".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.00363s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_noisefit".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003607s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_airmask".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003731s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/de03227a25b674dbcd018fab5715c91742f1243c/ds_report_artmask".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003666s.
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/de03227a25b674dbcd018fab5715c91742f1243c/datasink".
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000483s.
2025-10-09 23:09:52 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:09:53 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:09:53 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 04min 44s per subject.
2025-10-09 23:09:53 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 33min 10s).
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