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ds000007-mriqc/logs/duct/sub-05_2025.10.10T01.19.48-2286393_stdout
Felix Hoffstaedter 4c899a9406 [DATALAD RUNCMD] Compute MRIQC for sub-05 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-05 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-05",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:52:24 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2216916/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 23:19:50 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 23:19:50 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 23:19:50 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 23:19:50 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 23:19:50 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-231949_2598e5ab-3542-442f-8eaa-6f26bc5a552c.toml.
2025-10-09 23:19:54 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 23:19:55 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 23:19:55 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 23:19:56 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 23:19:59 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 23:20:03 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 23:20:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/5e5493305b684d1f3de50902731f8b82e7ee61e2/conform".
2025-10-09 23:20:03 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 23:20:03 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.376439s.
2025-10-09 23:20:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/13a49659d32c0b532d476a4a92340be0d0ae35b1/pick_echo".
2025-10-09 23:20:05 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 23:20:05 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000258s.
2025-10-09 23:20:07 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/provenance/mapflow/_provenance0".
2025-10-09 23:20:07 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:20:07 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042601s.
2025-10-09 23:20:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/4145cec61bdb378a2f33891bcaa63090cec125be/pick_echo".
2025-10-09 23:20:07 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 23:20:07 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 23:20:09 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/provenance/mapflow/_provenance0".
2025-10-09 23:20:09 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:20:09 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042656s.
2025-10-09 23:20:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/pick_echo".
2025-10-09 23:20:09 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 23:20:09 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000131s.
2025-10-09 23:20:11 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/provenance/mapflow/_provenance0".
2025-10-09 23:20:11 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:20:11 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042788s.
2025-10-09 23:20:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/pick_echo".
2025-10-09 23:20:11 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 23:20:11 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000122s.
2025-10-09 23:20:13 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/provenance/mapflow/_provenance0".
2025-10-09 23:20:13 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:20:13 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042912s.
2025-10-09 23:20:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c59ce54183667c58a1da4fbb902f00f274b2917c/pick_echo".
2025-10-09 23:20:13 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 23:20:13 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00011s.
2025-10-09 23:20:15 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/provenance/mapflow/_provenance0".
2025-10-09 23:20:15 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:20:15 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04283s.
2025-10-09 23:20:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/13930265280e615ab9405a810d8cc296cae20c3e/pick_echo".
2025-10-09 23:20:15 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 23:20:15 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00011s.
2025-10-09 23:20:17 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/provenance/mapflow/_provenance0".
2025-10-09 23:20:17 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:20:17 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042813s.
2025-10-09 23:20:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/pre_clip".
2025-10-09 23:20:17 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:20:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.508403s.
2025-10-09 23:20:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/5e5493305b684d1f3de50902731f8b82e7ee61e2/RotationMask".
2025-10-09 23:20:25 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 23:20:26 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.44311s.
2025-10-09 23:20:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotMosaicNoise".
2025-10-09 23:20:27 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:20:31 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.834625s.
2025-10-09 23:20:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/13a49659d32c0b532d476a4a92340be0d0ae35b1/non_steady_state_detector".
2025-10-09 23:20:31 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 23:20:31 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.142893s.
2025-10-09 23:20:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/4145cec61bdb378a2f33891bcaa63090cec125be/non_steady_state_detector".
2025-10-09 23:20:33 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 23:20:33 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.138905s.
2025-10-09 23:20:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/non_steady_state_detector".
2025-10-09 23:20:35 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 23:20:35 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.138854s.
2025-10-09 23:20:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/non_steady_state_detector".
2025-10-09 23:20:37 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 23:20:37 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.139278s.
2025-10-09 23:20:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c59ce54183667c58a1da4fbb902f00f274b2917c/non_steady_state_detector".
2025-10-09 23:20:39 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 23:20:39 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141679s.
2025-10-09 23:20:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/13930265280e615ab9405a810d8cc296cae20c3e/non_steady_state_detector".
2025-10-09 23:20:41 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 23:20:41 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.140516s.
2025-10-09 23:20:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/pre_n4".
2025-10-09 23:20:43 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:21:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 52.410179s.
2025-10-09 23:21:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_background".
2025-10-09 23:21:37 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:21:37 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007238s.
2025-10-09 23:21:37 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/13a49659d32c0b532d476a4a92340be0d0ae35b1/sanitize/mapflow/_sanitize0".
2025-10-09 23:21:37 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 23:21:38 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.017763s.
2025-10-09 23:21:39 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/4145cec61bdb378a2f33891bcaa63090cec125be/sanitize/mapflow/_sanitize0".
2025-10-09 23:21:39 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 23:21:39 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.030792s.
2025-10-09 23:21:41 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/sanitize/mapflow/_sanitize0".
2025-10-09 23:21:41 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 23:21:42 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.018779s.
2025-10-09 23:21:43 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/sanitize/mapflow/_sanitize0".
2025-10-09 23:21:43 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 23:21:44 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.006851s.
2025-10-09 23:21:45 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c59ce54183667c58a1da4fbb902f00f274b2917c/sanitize/mapflow/_sanitize0".
2025-10-09 23:21:45 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 23:21:46 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.025227s.
2025-10-09 23:21:47 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/13930265280e615ab9405a810d8cc296cae20c3e/sanitize/mapflow/_sanitize0".
2025-10-09 23:21:47 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 23:21:48 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.010133s.
2025-10-09 23:21:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/synthstrip".
2025-10-09 23:21:49 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:22:21 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 31.409173s.
2025-10-09 23:22:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/13a49659d32c0b532d476a4a92340be0d0ae35b1/estimate_hm".
2025-10-09 23:22:21 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 23:23:49 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 87.395406s.
2025-10-09 23:23:49 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 23:23:49 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:23:50 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.014635s.
2025-10-09 23:23:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4145cec61bdb378a2f33891bcaa63090cec125be/estimate_hm".
2025-10-09 23:23:51 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 23:25:19 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 87.870123s.
2025-10-09 23:25:19 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 23:25:19 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:25:20 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.986113s.
2025-10-09 23:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/estimate_hm".
2025-10-09 23:25:21 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 23:26:48 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 87.155752s.
2025-10-09 23:26:49 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 23:26:49 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:26:50 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.978418s.
2025-10-09 23:26:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/estimate_hm".
2025-10-09 23:26:51 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 23:28:20 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 88.623307s.
2025-10-09 23:28:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 23:28:21 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:28:22 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.991204s.
2025-10-09 23:28:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c59ce54183667c58a1da4fbb902f00f274b2917c/estimate_hm".
2025-10-09 23:28:23 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 23:29:49 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 86.104022s.
2025-10-09 23:29:51 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 23:29:51 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:29:52 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.941901s.
2025-10-09 23:29:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/13930265280e615ab9405a810d8cc296cae20c3e/estimate_hm".
2025-10-09 23:29:53 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 23:31:17 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 83.901843s.
2025-10-09 23:31:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 23:31:17 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:31:18 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.979716s.
2025-10-09 23:31:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/post_n4".
2025-10-09 23:31:19 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:31:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 11.865378s.
2025-10-09 23:31:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5e5493305b684d1f3de50902731f8b82e7ee61e2/smoothness".
2025-10-09 23:31:31 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:31:33 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.056267s.
2025-10-09 23:31:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotMosaicZoomed".
2025-10-09 23:31:35 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:31:38 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.135005s.
2025-10-09 23:31:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotBrainmask".
2025-10-09 23:31:39 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:31:41 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.013559s.
2025-10-09 23:31:43 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/13a49659d32c0b532d476a4a92340be0d0ae35b1/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 23:31:43 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:31:50 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 6.8792919999999995s.
2025-10-09 23:31:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/13a49659d32c0b532d476a4a92340be0d0ae35b1/ComputeFD".
2025-10-09 23:31:51 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 23:31:51 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005871s.
2025-10-09 23:31:53 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 23:31:53 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 23:31:54 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.364099s.
2025-10-09 23:31:55 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4145cec61bdb378a2f33891bcaa63090cec125be/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 23:31:55 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:32:02 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 6.944599s.
2025-10-09 23:32:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4145cec61bdb378a2f33891bcaa63090cec125be/ComputeFD".
2025-10-09 23:32:03 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 23:32:03 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001803s.
2025-10-09 23:32:05 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 23:32:05 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 23:32:06 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.360881s.
2025-10-09 23:32:07 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 23:32:07 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:32:14 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 6.893155s.
2025-10-09 23:32:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ComputeFD".
2025-10-09 23:32:15 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 23:32:15 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003925s.
2025-10-09 23:32:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 23:32:17 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 23:32:18 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.357346s.
2025-10-09 23:32:19 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 23:32:19 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:32:26 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 6.927614s.
2025-10-09 23:32:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ComputeFD".
2025-10-09 23:32:27 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 23:32:27 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005921s.
2025-10-09 23:32:29 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 23:32:29 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 23:32:30 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.339887s.
2025-10-09 23:32:31 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c59ce54183667c58a1da4fbb902f00f274b2917c/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 23:32:31 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:32:38 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 6.871427s.
2025-10-09 23:32:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c59ce54183667c58a1da4fbb902f00f274b2917c/ComputeFD".
2025-10-09 23:32:39 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 23:32:39 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004575s.
2025-10-09 23:32:41 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 23:32:41 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 23:32:42 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.36544s.
2025-10-09 23:32:43 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/13930265280e615ab9405a810d8cc296cae20c3e/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 23:32:43 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:32:50 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 6.793692s.
2025-10-09 23:32:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/13930265280e615ab9405a810d8cc296cae20c3e/ComputeFD".
2025-10-09 23:32:51 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 23:32:51 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005814s.
2025-10-09 23:32:53 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 23:32:53 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 23:32:54 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.361875s.
2025-10-09 23:32:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/final_masked".
2025-10-09 23:32:55 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:32:56 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.182015s.
2025-10-09 23:32:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization".
2025-10-09 23:32:57 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:32:58 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:33:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 23:33:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:33:44 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:33:44 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 23:33:44 | INFO | niworkflows | Generating visual report
2025-10-09 23:33:55 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 57.878344s.
2025-10-09 23:33:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_zoomed".
2025-10-09 23:33:55 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:33:55 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003778s.
2025-10-09 23:33:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_bmask".
2025-10-09 23:33:56 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:33:56 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003578s.
2025-10-09 23:33:56 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/13a49659d32c0b532d476a4a92340be0d0ae35b1/mean/mapflow/_mean0".
2025-10-09 23:33:56 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 23:33:56 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.583764s.
2025-10-09 23:33:57 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/13a49659d32c0b532d476a4a92340be0d0ae35b1/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 23:33:57 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 23:33:58 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.37637s.
2025-10-09 23:33:59 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/quality/mapflow/_quality0".
2025-10-09 23:33:59 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 23:34:01 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.224693s.
2025-10-09 23:34:01 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/4145cec61bdb378a2f33891bcaa63090cec125be/mean/mapflow/_mean0".
2025-10-09 23:34:01 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 23:34:02 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.500849s.
2025-10-09 23:34:03 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/4145cec61bdb378a2f33891bcaa63090cec125be/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 23:34:03 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 23:34:04 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.412066s.
2025-10-09 23:34:05 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/quality/mapflow/_quality0".
2025-10-09 23:34:05 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 23:34:07 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.194542s.
2025-10-09 23:34:07 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/mean/mapflow/_mean0".
2025-10-09 23:34:07 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 23:34:08 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.540548s.
2025-10-09 23:34:09 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 23:34:09 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 23:34:10 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.410156s.
2025-10-09 23:34:11 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/quality/mapflow/_quality0".
2025-10-09 23:34:11 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 23:34:13 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.178366s.
2025-10-09 23:34:13 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/mean/mapflow/_mean0".
2025-10-09 23:34:13 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 23:34:14 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.503114s.
2025-10-09 23:34:15 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/19cac49ac7730b96f5b29bb122e2956948d1d2a1/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 23:34:15 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 23:34:16 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.376378s.
2025-10-09 23:34:17 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/quality/mapflow/_quality0".
2025-10-09 23:34:17 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 23:34:19 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.165063s.
2025-10-09 23:34:19 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c59ce54183667c58a1da4fbb902f00f274b2917c/mean/mapflow/_mean0".
2025-10-09 23:34:19 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 23:34:20 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.502455s.
2025-10-09 23:34:21 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c59ce54183667c58a1da4fbb902f00f274b2917c/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 23:34:21 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 23:34:22 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.383258s.
2025-10-09 23:34:23 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/quality/mapflow/_quality0".
2025-10-09 23:34:23 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 23:34:25 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.198252s.
2025-10-09 23:34:26 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/13930265280e615ab9405a810d8cc296cae20c3e/mean/mapflow/_mean0".
2025-10-09 23:34:26 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 23:34:26 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.498467s.
2025-10-09 23:34:27 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/13930265280e615ab9405a810d8cc296cae20c3e/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 23:34:27 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 23:34:28 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.415305s.
2025-10-09 23:34:29 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/quality/mapflow/_quality0".
2025-10-09 23:34:29 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 23:34:31 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.166272s.
2025-10-09 23:34:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_norm".
2025-10-09 23:34:31 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:34:31 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003561s.
2025-10-09 23:34:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/pre_clip".
2025-10-09 23:34:32 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:34:32 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.200607s.
2025-10-09 23:34:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/SharpenEPI".
2025-10-09 23:34:33 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:34:35 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.413087s.
2025-10-09 23:34:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 23:34:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.790748s.
2025-10-09 23:34:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 23:34:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.805979s.
2025-10-09 23:34:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 23:34:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.854484s.
2025-10-09 23:34:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/pre_clip".
2025-10-09 23:34:41 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:34:42 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.205028s.
2025-10-09 23:34:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/SharpenEPI".
2025-10-09 23:34:43 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:34:45 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5069059999999999s.
2025-10-09 23:34:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 23:34:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.795553s.
2025-10-09 23:34:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 23:34:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.852653s.
2025-10-09 23:34:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 23:34:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.860348s.
2025-10-09 23:34:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/pre_clip".
2025-10-09 23:34:51 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:34:52 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.206656s.
2025-10-09 23:34:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/SharpenEPI".
2025-10-09 23:34:53 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:34:55 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.48431s.
2025-10-09 23:34:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 23:34:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.764079s.
2025-10-09 23:34:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 23:34:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:34:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.833989s.
2025-10-09 23:34:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 23:34:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.855088s.
2025-10-09 23:35:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/pre_clip".
2025-10-09 23:35:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:35:02 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.206611s.
2025-10-09 23:35:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/SharpenEPI".
2025-10-09 23:35:03 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:05 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.514684s.
2025-10-09 23:35:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 23:35:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.799821s.
2025-10-09 23:35:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 23:35:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.860516s.
2025-10-09 23:35:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 23:35:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.86221s.
2025-10-09 23:35:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/pre_clip".
2025-10-09 23:35:11 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:35:12 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.212466s.
2025-10-09 23:35:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/SharpenEPI".
2025-10-09 23:35:13 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:15 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.483216s.
2025-10-09 23:35:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 23:35:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.771688s.
2025-10-09 23:35:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 23:35:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.82188s.
2025-10-09 23:35:19 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 23:35:19 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.870781s.
2025-10-09 23:35:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/pre_clip".
2025-10-09 23:35:21 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 23:35:22 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.246264s.
2025-10-09 23:35:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/SharpenEPI".
2025-10-09 23:35:23 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:25 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.508745s.
2025-10-09 23:35:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 23:35:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.813285s.
2025-10-09 23:35:27 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 23:35:27 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.863588s.
2025-10-09 23:35:29 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 23:35:29 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:35:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.865101s.
2025-10-09 23:35:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/pre_n4".
2025-10-09 23:35:31 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:33 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.460264s.
2025-10-09 23:35:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 23:35:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004073s.
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003857s.
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003991s.
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/pre_n4".
2025-10-09 23:35:34 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:35 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.410206s.
2025-10-09 23:35:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 23:35:35 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:35 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003969s.
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003828s.
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004006s.
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/pre_n4".
2025-10-09 23:35:36 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:37 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.399613s.
2025-10-09 23:35:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 23:35:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00389s.
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003787s.
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004394s.
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/pre_n4".
2025-10-09 23:35:38 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:39 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.40118s.
2025-10-09 23:35:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 23:35:39 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:39 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004138s.
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003914s.
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003845s.
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/pre_n4".
2025-10-09 23:35:40 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:41 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.401137s.
2025-10-09 23:35:41 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 23:35:41 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:41 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003951s.
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003898s.
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.011958s.
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/pre_n4".
2025-10-09 23:35:42 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:35:43 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.39887s.
2025-10-09 23:35:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 23:35:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003842s.
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00385s.
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003992s.
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/synthstrip".
2025-10-09 23:35:44 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:36:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.41743s.
2025-10-09 23:36:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/synthstrip".
2025-10-09 23:36:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:36:38 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.565609s.
2025-10-09 23:36:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/synthstrip".
2025-10-09 23:36:39 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:37:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.347174s.
2025-10-09 23:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/synthstrip".
2025-10-09 23:37:08 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:37:34 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.249215s.
2025-10-09 23:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/synthstrip".
2025-10-09 23:37:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:38:02 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.199787s.
2025-10-09 23:38:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/synthstrip".
2025-10-09 23:38:04 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 23:38:30 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.282026s.
2025-10-09 23:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/post_n4".
2025-10-09 23:38:32 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:38:32 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.671622s.
2025-10-09 23:38:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/EPI2MNI".
2025-10-09 23:38:34 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:38:34 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:38:50 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/EPI2MNI/stderr.nipype-init).
2025-10-09 23:38:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:38:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/SharpenEPI/sub-05_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/SharpenEPI/sub-05_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/SharpenEPI/sub-05_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:39:46 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:39:46 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:39:46 | INFO | niworkflows | Generating visual report
2025-10-09 23:39:58 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 84.304972s.
2025-10-09 23:40:00 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:40:00 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:40:03 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.839794s.
2025-10-09 23:40:04 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/smoothness/mapflow/_smoothness0".
2025-10-09 23:40:04 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:40:04 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.226306s.
2025-10-09 23:40:06 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/outliers/mapflow/_outliers0".
2025-10-09 23:40:06 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:40:06 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.703174s.
2025-10-09 23:40:08 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/gcor/mapflow/_gcor0".
2025-10-09 23:40:08 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:40:09 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.151936s.
2025-10-09 23:40:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/dilated_mask".
2025-10-09 23:40:10 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:40:10 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013999s.
2025-10-09 23:40:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:40:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:40:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.761128s.
2025-10-09 23:40:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/PlotBrainmask".
2025-10-09 23:40:14 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:40:15 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.915291s.
2025-10-09 23:40:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/post_n4".
2025-10-09 23:40:16 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:40:16 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.637315s.
2025-10-09 23:40:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/EPI2MNI".
2025-10-09 23:40:18 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:40:18 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:40:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:40:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/SharpenEPI/sub-05_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/SharpenEPI/sub-05_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/SharpenEPI/sub-05_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:41:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:41:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:41:30 | INFO | niworkflows | Generating visual report
2025-10-09 23:41:42 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 84.349559s.
2025-10-09 23:41:44 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:41:44 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:41:47 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.656392s.
2025-10-09 23:41:48 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/smoothness/mapflow/_smoothness0".
2025-10-09 23:41:48 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:41:48 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.222551s.
2025-10-09 23:41:50 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/outliers/mapflow/_outliers0".
2025-10-09 23:41:50 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:41:50 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.646833s.
2025-10-09 23:41:52 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/gcor/mapflow/_gcor0".
2025-10-09 23:41:52 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:41:53 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.023297s.
2025-10-09 23:41:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/dilated_mask".
2025-10-09 23:41:54 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:41:54 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01467s.
2025-10-09 23:41:56 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:41:56 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:41:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.799651s.
2025-10-09 23:41:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/PlotBrainmask".
2025-10-09 23:41:58 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:41:59 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.951705s.
2025-10-09 23:42:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/post_n4".
2025-10-09 23:42:00 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:42:00 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.67376s.
2025-10-09 23:42:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/EPI2MNI".
2025-10-09 23:42:02 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:42:02 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:42:18 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/EPI2MNI/stderr.nipype-init).
2025-10-09 23:42:18 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:42:18 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/SharpenEPI/sub-05_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/SharpenEPI/sub-05_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/SharpenEPI/sub-05_task-stopvocal_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:43:15 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:43:15 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:43:15 | INFO | niworkflows | Generating visual report
2025-10-09 23:43:26 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 84.307714s.
2025-10-09 23:43:28 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:43:28 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:43:31 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.699236s.
2025-10-09 23:43:32 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/smoothness/mapflow/_smoothness0".
2025-10-09 23:43:32 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:43:32 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.239542s.
2025-10-09 23:43:34 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/outliers/mapflow/_outliers0".
2025-10-09 23:43:34 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:43:34 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.686492s.
2025-10-09 23:43:36 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/gcor/mapflow/_gcor0".
2025-10-09 23:43:36 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:43:37 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.040991s.
2025-10-09 23:43:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/dilated_mask".
2025-10-09 23:43:38 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:43:38 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014497s.
2025-10-09 23:43:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:43:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:43:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.758462s.
2025-10-09 23:43:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/PlotBrainmask".
2025-10-09 23:43:42 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:43:43 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.901624s.
2025-10-09 23:43:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/post_n4".
2025-10-09 23:43:44 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:43:44 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.685111s.
2025-10-09 23:43:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/EPI2MNI".
2025-10-09 23:43:46 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:43:46 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:44:04 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:44:04 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/SharpenEPI/sub-05_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/SharpenEPI/sub-05_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/SharpenEPI/sub-05_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:45:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:45:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:45:01 | INFO | niworkflows | Generating visual report
2025-10-09 23:45:12 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 86.386176s.
2025-10-09 23:45:14 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:45:14 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:45:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.71301s.
2025-10-09 23:45:18 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/smoothness/mapflow/_smoothness0".
2025-10-09 23:45:18 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:45:18 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.239017s.
2025-10-09 23:45:20 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/outliers/mapflow/_outliers0".
2025-10-09 23:45:20 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:45:20 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.64253s.
2025-10-09 23:45:22 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/gcor/mapflow/_gcor0".
2025-10-09 23:45:22 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:45:23 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.043258s.
2025-10-09 23:45:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/dilated_mask".
2025-10-09 23:45:24 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:45:24 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015691s.
2025-10-09 23:45:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:45:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:45:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.800507s.
2025-10-09 23:45:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/PlotBrainmask".
2025-10-09 23:45:28 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:45:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.950636s.
2025-10-09 23:45:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/post_n4".
2025-10-09 23:45:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:45:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.686782s.
2025-10-09 23:45:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/EPI2MNI".
2025-10-09 23:45:32 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:45:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:45:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:45:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/SharpenEPI/sub-05_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/SharpenEPI/sub-05_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/SharpenEPI/sub-05_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:46:45 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:46:45 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:46:45 | INFO | niworkflows | Generating visual report
2025-10-09 23:46:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 84.64021s.
2025-10-09 23:46:58 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:46:58 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:47:02 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.79788s.
2025-10-09 23:47:02 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/smoothness/mapflow/_smoothness0".
2025-10-09 23:47:02 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:47:02 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.27657s.
2025-10-09 23:47:04 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/outliers/mapflow/_outliers0".
2025-10-09 23:47:04 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:47:04 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.688598s.
2025-10-09 23:47:06 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/gcor/mapflow/_gcor0".
2025-10-09 23:47:06 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:47:07 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.037668s.
2025-10-09 23:47:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/dilated_mask".
2025-10-09 23:47:08 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:47:08 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.012543s.
2025-10-09 23:47:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:47:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:47:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.798351s.
2025-10-09 23:47:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/PlotBrainmask".
2025-10-09 23:47:12 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:47:13 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.961748s.
2025-10-09 23:47:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/post_n4".
2025-10-09 23:47:14 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:47:14 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.652066s.
2025-10-09 23:47:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/EPI2MNI".
2025-10-09 23:47:16 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:47:16 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:47:33 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/EPI2MNI/stderr.nipype-init).
2025-10-09 23:47:33 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:47:33 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/SharpenEPI/sub-05_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/SharpenEPI/sub-05_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/SharpenEPI/sub-05_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:48:29 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:48:29 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:48:29 | INFO | niworkflows | Generating visual report
2025-10-09 23:48:41 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 84.898667s.
2025-10-09 23:48:42 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:48:42 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:48:46 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.795569s.
2025-10-09 23:48:46 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/smoothness/mapflow/_smoothness0".
2025-10-09 23:48:46 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:48:46 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.238736s.
2025-10-09 23:48:48 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/outliers/mapflow/_outliers0".
2025-10-09 23:48:48 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:48:48 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.6893s.
2025-10-09 23:48:50 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/gcor/mapflow/_gcor0".
2025-10-09 23:48:50 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:48:51 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.018639s.
2025-10-09 23:48:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/dilated_mask".
2025-10-09 23:48:52 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:48:52 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01454s.
2025-10-09 23:48:54 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:48:54 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:48:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.797879s.
2025-10-09 23:48:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/PlotBrainmask".
2025-10-09 23:48:56 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:48:57 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.948858s.
2025-10-09 23:48:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/final_masked".
2025-10-09 23:48:58 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:48:58 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021909s.
2025-10-09 23:49:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13a49659d32c0b532d476a4a92340be0d0ae35b1/ResampleSegmentation".
2025-10-09 23:49:00 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:49:01 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.905948s.
2025-10-09 23:49:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_norm".
2025-10-09 23:49:02 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:02 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003907s.
2025-10-09 23:49:02 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/measures/mapflow/_measures0".
2025-10-09 23:49:02 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:49:02 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.353228s.
2025-10-09 23:49:04 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/timeseries/mapflow/_timeseries0".
2025-10-09 23:49:04 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:49:04 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018105s.
2025-10-09 23:49:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/subtract_mask".
2025-10-09 23:49:06 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:49:06 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011107s.
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003889s.
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_bmask".
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003757s.
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4145cec61bdb378a2f33891bcaa63090cec125be/final_masked".
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:49:08 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027632s.
2025-10-09 23:49:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4145cec61bdb378a2f33891bcaa63090cec125be/ResampleSegmentation".
2025-10-09 23:49:10 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:49:11 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.839263s.
2025-10-09 23:49:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_norm".
2025-10-09 23:49:12 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:12 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003781s.
2025-10-09 23:49:12 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/measures/mapflow/_measures0".
2025-10-09 23:49:12 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:49:12 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.372032s.
2025-10-09 23:49:14 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/timeseries/mapflow/_timeseries0".
2025-10-09 23:49:14 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:49:14 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014s.
2025-10-09 23:49:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/subtract_mask".
2025-10-09 23:49:16 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:49:16 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01493s.
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004068s.
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_bmask".
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004059s.
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/final_masked".
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:49:18 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021721s.
2025-10-09 23:49:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ResampleSegmentation".
2025-10-09 23:49:20 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:49:21 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.841578s.
2025-10-09 23:49:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_norm".
2025-10-09 23:49:22 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:22 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004037s.
2025-10-09 23:49:22 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/measures/mapflow/_measures0".
2025-10-09 23:49:22 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:49:22 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.331207s.
2025-10-09 23:49:24 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/timeseries/mapflow/_timeseries0".
2025-10-09 23:49:24 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:49:24 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015243s.
2025-10-09 23:49:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/subtract_mask".
2025-10-09 23:49:26 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:49:26 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013051s.
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003866s.
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_bmask".
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003741s.
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/final_masked".
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:49:28 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021441s.
2025-10-09 23:49:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ResampleSegmentation".
2025-10-09 23:49:30 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:49:31 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.833136s.
2025-10-09 23:49:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_norm".
2025-10-09 23:49:32 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:32 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003847s.
2025-10-09 23:49:32 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/measures/mapflow/_measures0".
2025-10-09 23:49:32 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:49:32 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.359391s.
2025-10-09 23:49:34 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/timeseries/mapflow/_timeseries0".
2025-10-09 23:49:34 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:49:34 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.013972s.
2025-10-09 23:49:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/subtract_mask".
2025-10-09 23:49:36 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:49:36 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012979s.
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004042s.
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_bmask".
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003749s.
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/final_masked".
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:49:38 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021668s.
2025-10-09 23:49:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c59ce54183667c58a1da4fbb902f00f274b2917c/ResampleSegmentation".
2025-10-09 23:49:40 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:49:41 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.869651s.
2025-10-09 23:49:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_norm".
2025-10-09 23:49:42 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:42 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003804s.
2025-10-09 23:49:42 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/measures/mapflow/_measures0".
2025-10-09 23:49:42 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:49:42 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.333578s.
2025-10-09 23:49:44 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/timeseries/mapflow/_timeseries0".
2025-10-09 23:49:44 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:49:44 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.009807s.
2025-10-09 23:49:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/subtract_mask".
2025-10-09 23:49:46 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:49:46 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013355s.
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003977s.
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_bmask".
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003827s.
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/13930265280e615ab9405a810d8cc296cae20c3e/final_masked".
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:49:48 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02217s.
2025-10-09 23:49:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/13930265280e615ab9405a810d8cc296cae20c3e/ResampleSegmentation".
2025-10-09 23:49:50 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:49:51 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.862146s.
2025-10-09 23:49:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_norm".
2025-10-09 23:49:52 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:52 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003928s.
2025-10-09 23:49:52 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/measures/mapflow/_measures0".
2025-10-09 23:49:52 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:49:52 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.322158s.
2025-10-09 23:49:54 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/timeseries/mapflow/_timeseries0".
2025-10-09 23:49:54 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:49:54 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.007879s.
2025-10-09 23:49:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/subtract_mask".
2025-10-09 23:49:56 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:49:56 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011194s.
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003877s.
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_bmask".
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003769s.
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/datasink/mapflow/_datasink0".
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000531s.
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003665s.
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/parcels".
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:49:58 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018271s.
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/datasink/mapflow/_datasink0".
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000403s.
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4145cec61bdb378a2f33891bcaa63090cec125be/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003657s.
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/parcels".
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:00 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018123s.
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/datasink/mapflow/_datasink0".
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00042s.
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003686s.
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/parcels".
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:02 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015932s.
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/datasink/mapflow/_datasink0".
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000406s.
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003557s.
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/parcels".
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:04 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015248s.
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/datasink/mapflow/_datasink0".
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000445s.
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003713s.
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/parcels".
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:06 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.011471s.
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/datasink/mapflow/_datasink0".
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000421s.
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/13930265280e615ab9405a810d8cc296cae20c3e/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003796s.
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/parcels".
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:08 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01217s.
2025-10-09 23:50:10 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:50:10 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:50:11 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.241938s.
2025-10-09 23:50:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:50:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:50:13 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.239899s.
2025-10-09 23:50:14 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:50:14 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:50:15 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.330897s.
2025-10-09 23:50:16 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:50:16 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:50:17 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.195513s.
2025-10-09 23:50:18 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:50:18 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:50:19 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.1852610000000001s.
2025-10-09 23:50:20 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:50:20 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:50:21 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.322081s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13a49659d32c0b532d476a4a92340be0d0ae35b1/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003877s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4145cec61bdb378a2f33891bcaa63090cec125be/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003716s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b0a8067bc2639f4c4df74f4a1a2daed5f46aa01a/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003726s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/19cac49ac7730b96f5b29bb122e2956948d1d2a1/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003793s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c59ce54183667c58a1da4fbb902f00f274b2917c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003886s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/13930265280e615ab9405a810d8cc296cae20c3e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003808s.
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:50:22 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:50:26 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.7383319999999998s.
2025-10-09 23:50:28 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:50:28 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:50:32 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.7967969999999998s.
2025-10-09 23:50:32 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:50:32 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.746248s.
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/5e5493305b684d1f3de50902731f8b82e7ee61e2/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:50:36 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:50:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/5e5493305b684d1f3de50902731f8b82e7ee61e2/Enhance".
2025-10-09 23:50:38 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:38 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.435648s.
2025-10-09 23:50:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/5e5493305b684d1f3de50902731f8b82e7ee61e2/format_tpm_names".
2025-10-09 23:50:40 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:41 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.749801s.
2025-10-09 23:50:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/5e5493305b684d1f3de50902731f8b82e7ee61e2/Grad".
2025-10-09 23:50:42 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:43 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.016033s.
2025-10-09 23:50:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/5e5493305b684d1f3de50902731f8b82e7ee61e2/apply_mask".
2025-10-09 23:50:44 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:50:44 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.181721s.
2025-10-09 23:50:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/5e5493305b684d1f3de50902731f8b82e7ee61e2/GradientThreshold".
2025-10-09 23:50:46 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:50:50 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 3.790404s.
2025-10-09 23:50:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/5e5493305b684d1f3de50902731f8b82e7ee61e2/segmentation".
2025-10-09 23:50:50 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:51:26 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 35.98359s.
2025-10-09 23:51:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/5e5493305b684d1f3de50902731f8b82e7ee61e2/ArtifactMask".
2025-10-09 23:51:28 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:51:29 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.060224s.
2025-10-09 23:51:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotHeadmask".
2025-10-09 23:51:30 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:51:32 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.707438s.
2025-10-09 23:51:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5e5493305b684d1f3de50902731f8b82e7ee61e2/harmonize".
2025-10-09 23:51:32 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:51:32 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.472001s.
2025-10-09 23:51:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotSegmentation".
2025-10-09 23:51:34 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:51:36 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 1.913652s.
2025-10-09 23:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5e5493305b684d1f3de50902731f8b82e7ee61e2/provenance".
2025-10-09 23:51:38 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:51:38 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.041377s.
2025-10-09 23:51:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5e5493305b684d1f3de50902731f8b82e7ee61e2/ComputeQI2".
2025-10-09 23:51:38 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:51:47 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 8.840946s.
2025-10-09 23:51:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotAirmask".
2025-10-09 23:51:48 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:51:50 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.71919s.
2025-10-09 23:51:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/PlotArtmask".
2025-10-09 23:51:50 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:51:52 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.7661639999999998s.
2025-10-09 23:51:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_headmask".
2025-10-09 23:51:52 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:51:52 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003563s.
2025-10-09 23:51:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5e5493305b684d1f3de50902731f8b82e7ee61e2/measures".
2025-10-09 23:51:52 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:51:55 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.375013s.
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_segm".
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003614s.
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_noisefit".
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003621s.
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_airmask".
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003584s.
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/5e5493305b684d1f3de50902731f8b82e7ee61e2/ds_report_artmask".
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003481s.
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/5e5493305b684d1f3de50902731f8b82e7ee61e2/datasink".
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:51:56 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000484s.
2025-10-09 23:51:58 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:51:59 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:51:59 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 04min 35s per subject.
2025-10-09 23:51:59 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 32min 09s).
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