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ds000007-mriqc/logs/duct/sub-04_2025.10.10T00.36.38-2212824_stdout
Felix Hoffstaedter f60589877b [DATALAD RUNCMD] Compute MRIQC for sub-04 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-04 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-04",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:13:24 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2208815/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:40 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:40 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:40 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:40 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:40 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223639_0ded2ce6-3278-49db-be41-f470dd54fff4.toml.
2025-10-09 22:36:44 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:45 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:45 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:46 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:50 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:53 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/6680be59127e199463cb8000bbe7e84646698fae/conform".
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:54 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.400418s.
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f1f28c3362da7f102e4694ca5b687e22da2b272b/pick_echo".
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:56 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000205s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/provenance/mapflow/_provenance0".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042749s.
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/585207b44b1c1a7a63cd35215da95f628517d4f9/pick_echo".
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:58 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000116s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/provenance/mapflow/_provenance0".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.043044s.
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/pick_echo".
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000122s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/provenance/mapflow/_provenance0".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042943s.
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/pick_echo".
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:02 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000124s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/provenance/mapflow/_provenance0".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042488s.
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/58a8256503986b599df66acee1a89eed5cb0a9c4/pick_echo".
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:04 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000112s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/provenance/mapflow/_provenance0".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042518s.
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/0432f16c0ed43aaa496230a503af89f2740239f8/pick_echo".
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:06 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/provenance/mapflow/_provenance0".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042467s.
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6680be59127e199463cb8000bbe7e84646698fae/pre_clip".
2025-10-09 22:37:08 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:16 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.99176s.
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/6680be59127e199463cb8000bbe7e84646698fae/RotationMask".
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:18 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.459839s.
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotMosaicNoise".
2025-10-09 22:37:20 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:24 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.022196s.
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f1f28c3362da7f102e4694ca5b687e22da2b272b/non_steady_state_detector".
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:26 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.166255s.
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/585207b44b1c1a7a63cd35215da95f628517d4f9/non_steady_state_detector".
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:28 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.164628s.
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/non_steady_state_detector".
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:30 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.163694s.
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/non_steady_state_detector".
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:32 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.164079s.
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/58a8256503986b599df66acee1a89eed5cb0a9c4/non_steady_state_detector".
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:34 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.163124s.
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/0432f16c0ed43aaa496230a503af89f2740239f8/non_steady_state_detector".
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:36 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.163659s.
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6680be59127e199463cb8000bbe7e84646698fae/pre_n4".
2025-10-09 22:37:38 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:30 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 51.866228s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_background".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.006992s.
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f1f28c3362da7f102e4694ca5b687e22da2b272b/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034393s.
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/585207b44b1c1a7a63cd35215da95f628517d4f9/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.172367s.
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:36 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.039841s.
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:38 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.166005s.
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/58a8256503986b599df66acee1a89eed5cb0a9c4/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:40 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.158206s.
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/0432f16c0ed43aaa496230a503af89f2740239f8/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:42 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034952s.
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6680be59127e199463cb8000bbe7e84646698fae/synthstrip".
2025-10-09 22:38:44 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:22 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 38.814179s.
2025-10-09 22:39:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f1f28c3362da7f102e4694ca5b687e22da2b272b/estimate_hm".
2025-10-09 22:39:24 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:13 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.466653s.
2025-10-09 22:41:14 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:14 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:15 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.282362s.
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/585207b44b1c1a7a63cd35215da95f628517d4f9/estimate_hm".
2025-10-09 22:41:16 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:04 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 108.264825s.
2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:43:06 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:07 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.2702149999999999s.
2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/estimate_hm".
2025-10-09 22:43:08 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:59 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.370862s.
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:00 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:01 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.2429459999999999s.
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/estimate_hm".
2025-10-09 22:45:02 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:50 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 108.362529s.
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:52 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:53 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.235564s.
2025-10-09 22:46:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/58a8256503986b599df66acee1a89eed5cb0a9c4/estimate_hm".
2025-10-09 22:46:54 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:44 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.656844s.
2025-10-09 22:48:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:44 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:45 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.2583579999999999s.
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0432f16c0ed43aaa496230a503af89f2740239f8/estimate_hm".
2025-10-09 22:48:46 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 111.262716s.
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:50:38 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.261096s.
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6680be59127e199463cb8000bbe7e84646698fae/post_n4".
2025-10-09 22:50:40 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 12.631216s.
2025-10-09 22:50:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6680be59127e199463cb8000bbe7e84646698fae/smoothness".
2025-10-09 22:50:54 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:50:56 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.518268s.
2025-10-09 22:50:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotMosaicZoomed".
2025-10-09 22:50:58 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.316911s.
2025-10-09 22:51:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotBrainmask".
2025-10-09 22:51:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:51:04 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.373033s.
2025-10-09 22:51:06 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f1f28c3362da7f102e4694ca5b687e22da2b272b/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:06 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.288594s.
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f1f28c3362da7f102e4694ca5b687e22da2b272b/ComputeFD".
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002216s.
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.373384s.
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/585207b44b1c1a7a63cd35215da95f628517d4f9/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.250608s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/585207b44b1c1a7a63cd35215da95f628517d4f9/ComputeFD".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00591s.
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.371331s.
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.312304s.
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ComputeFD".
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005982s.
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.39112s.
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.297179s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ComputeFD".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006103s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.396411s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/58a8256503986b599df66acee1a89eed5cb0a9c4/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.281341s.
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/58a8256503986b599df66acee1a89eed5cb0a9c4/ComputeFD".
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00859s.
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.391643s.
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0432f16c0ed43aaa496230a503af89f2740239f8/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 8.374714s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0432f16c0ed43aaa496230a503af89f2740239f8/ComputeFD".
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003692s.
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.365905s.
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/6680be59127e199463cb8000bbe7e84646698fae/final_masked".
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.201773s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:52:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:53:22 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:53:22 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:53:22 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:53:32 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:53:33 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:53:33 | INFO | niworkflows | Generating visual report
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 74.652888s.
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_zoomed".
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004059s.
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_bmask".
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003832s.
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f1f28c3362da7f102e4694ca5b687e22da2b272b/mean/mapflow/_mean0".
2025-10-09 22:53:48 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.582723s.
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f1f28c3362da7f102e4694ca5b687e22da2b272b/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.433579s.
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/quality/mapflow/_quality0".
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.259954s.
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/585207b44b1c1a7a63cd35215da95f628517d4f9/mean/mapflow/_mean0".
2025-10-09 22:53:54 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.561944s.
2025-10-09 22:53:56 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/585207b44b1c1a7a63cd35215da95f628517d4f9/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:56 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.438566s.
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/quality/mapflow/_quality0".
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.232157s.
2025-10-09 22:54:00 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/mean/mapflow/_mean0".
2025-10-09 22:54:00 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.557041s.
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/a5fe9818919348c874f1451e4375dd6bd5d2ef87/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.420246s.
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/quality/mapflow/_quality0".
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.238355s.
2025-10-09 22:54:06 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/mean/mapflow/_mean0".
2025-10-09 22:54:06 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.537538s.
2025-10-09 22:54:08 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:08 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:08 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.416721s.
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/quality/mapflow/_quality0".
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.224729s.
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/58a8256503986b599df66acee1a89eed5cb0a9c4/mean/mapflow/_mean0".
2025-10-09 22:54:12 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.540355s.
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/58a8256503986b599df66acee1a89eed5cb0a9c4/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.413843s.
2025-10-09 22:54:16 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/quality/mapflow/_quality0".
2025-10-09 22:54:16 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.217648s.
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/0432f16c0ed43aaa496230a503af89f2740239f8/mean/mapflow/_mean0".
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:19 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.561992s.
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/0432f16c0ed43aaa496230a503af89f2740239f8/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.437887s.
2025-10-09 22:54:22 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/quality/mapflow/_quality0".
2025-10-09 22:54:22 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.2451699999999999s.
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_norm".
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003835s.
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/pre_clip".
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.243015s.
2025-10-09 22:54:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/SharpenEPI".
2025-10-09 22:54:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.460667s.
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.812831s.
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.853862s.
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.876389s.
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/pre_clip".
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.224089s.
2025-10-09 22:54:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/SharpenEPI".
2025-10-09 22:54:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.488076s.
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.817009s.
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.854444s.
2025-10-09 22:54:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.853795s.
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/pre_clip".
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.227278s.
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/SharpenEPI".
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.511995s.
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.819459s.
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.863191s.
2025-10-09 22:54:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.873652s.
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/pre_clip".
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.230049s.
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/SharpenEPI".
2025-10-09 22:54:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5201660000000001s.
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.823717s.
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.872151s.
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.886818s.
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/pre_clip".
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.235789s.
2025-10-09 22:55:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/SharpenEPI".
2025-10-09 22:55:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.504245s.
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.82973s.
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.871544s.
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:13 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.864953s.
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/pre_clip".
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.236123s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/SharpenEPI".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.528068s.
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.8346s.
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.876945s.
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.887206s.
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/pre_n4".
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.509394s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004167s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00411s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004225s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/pre_n4".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.461275s.
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004165s.
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004118s.
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004217s.
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/pre_n4".
2025-10-09 22:55:28 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.455619s.
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004291s.
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004118s.
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004108s.
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/pre_n4".
2025-10-09 22:55:30 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4601250000000001s.
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004243s.
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004206s.
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004108s.
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/pre_n4".
2025-10-09 22:55:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.450022s.
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004197s.
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004121s.
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004098s.
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/pre_n4".
2025-10-09 22:55:34 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.422414s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004221s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004108s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004079s.
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/synthstrip".
2025-10-09 22:55:36 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.701309s.
2025-10-09 22:56:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/synthstrip".
2025-10-09 22:56:10 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:43 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.867294s.
2025-10-09 22:56:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/synthstrip".
2025-10-09 22:56:44 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.729617s.
2025-10-09 22:57:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/synthstrip".
2025-10-09 22:57:18 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:51 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.741819s.
2025-10-09 22:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/synthstrip".
2025-10-09 22:57:52 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:25 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.736707s.
2025-10-09 22:58:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/synthstrip".
2025-10-09 22:58:26 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:59 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.706278s.
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/post_n4".
2025-10-09 22:59:00 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:01 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.729926s.
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/EPI2MNI".
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:02 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:21 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:21 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/SharpenEPI/sub-04_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/SharpenEPI/sub-04_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/SharpenEPI/sub-04_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:17 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:31 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.233567s.
2025-10-09 23:00:32 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:32 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.39407s.
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.247352s.
2025-10-09 23:00:40 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/outliers/mapflow/_outliers0".
2025-10-09 23:00:40 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.802267s.
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/gcor/mapflow/_gcor0".
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:43 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.1066259999999999s.
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/dilated_mask".
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016086s.
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:00:46 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:00:47 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.823658s.
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/PlotBrainmask".
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:00:49 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.160663s.
2025-10-09 23:00:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/post_n4".
2025-10-09 23:00:50 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:00:51 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.732805s.
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/EPI2MNI".
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:00:52 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:11 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:11 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/SharpenEPI/sub-04_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/SharpenEPI/sub-04_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/SharpenEPI/sub-04_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:06 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:06 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:06 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:20 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.668191s.
2025-10-09 23:02:20 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:20 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.385102s.
2025-10-09 23:02:26 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:26 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:26 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.244532s.
2025-10-09 23:02:28 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/outliers/mapflow/_outliers0".
2025-10-09 23:02:28 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.776718s.
2025-10-09 23:02:30 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/gcor/mapflow/_gcor0".
2025-10-09 23:02:30 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.00487s.
2025-10-09 23:02:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/dilated_mask".
2025-10-09 23:02:32 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:32 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016952s.
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:35 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.827446s.
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/PlotBrainmask".
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:37 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.167173s.
2025-10-09 23:02:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/post_n4".
2025-10-09 23:02:38 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:39 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.734255s.
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/EPI2MNI".
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:40 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:00 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:00 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/SharpenEPI/sub-04_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/SharpenEPI/sub-04_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/SharpenEPI/sub-04_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:03:56 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:03:56 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:03:56 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:10 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.172367s.
2025-10-09 23:04:12 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:12 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.364414s.
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.245279s.
2025-10-09 23:04:20 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/outliers/mapflow/_outliers0".
2025-10-09 23:04:20 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:21 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.781444s.
2025-10-09 23:04:22 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/gcor/mapflow/_gcor0".
2025-10-09 23:04:22 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.005615s.
2025-10-09 23:04:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/dilated_mask".
2025-10-09 23:04:24 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:24 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015284s.
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.802979s.
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/PlotBrainmask".
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.171664s.
2025-10-09 23:04:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/post_n4".
2025-10-09 23:04:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:31 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.705924s.
2025-10-09 23:04:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/EPI2MNI".
2025-10-09 23:04:32 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:04:52 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/EPI2MNI/stderr.nipype-init).
2025-10-09 23:04:52 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:04:52 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/SharpenEPI/sub-04_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/SharpenEPI/sub-04_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/SharpenEPI/sub-04_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:05:46 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:05:46 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:05:46 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:00 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 88.083409s.
2025-10-09 23:06:02 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:02 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:07 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.31678s.
2025-10-09 23:06:08 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:08 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:09 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.273833s.
2025-10-09 23:06:10 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/outliers/mapflow/_outliers0".
2025-10-09 23:06:10 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:11 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.759121s.
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/gcor/mapflow/_gcor0".
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:13 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.983815s.
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/dilated_mask".
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014573s.
2025-10-09 23:06:16 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:16 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.8312s.
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/PlotBrainmask".
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:19 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.183629s.
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/post_n4".
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.738026s.
2025-10-09 23:06:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/EPI2MNI".
2025-10-09 23:06:22 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:22 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:06:41 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/EPI2MNI/stderr.nipype-init).
2025-10-09 23:06:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:06:41 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/SharpenEPI/sub-04_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/SharpenEPI/sub-04_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/SharpenEPI/sub-04_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:37 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:37 | INFO | niworkflows | Generating visual report
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 88.747028s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.271343s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/smoothness/mapflow/_smoothness0".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:07:59 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.265485s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/outliers/mapflow/_outliers0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.771613s.
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/gcor/mapflow/_gcor0".
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 0.994456s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/dilated_mask".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015934s.
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.827638s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/PlotBrainmask".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.1798009999999999s.
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/post_n4".
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.734558s.
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/EPI2MNI".
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:08:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:08:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:08:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/SharpenEPI/sub-04_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/SharpenEPI/sub-04_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/SharpenEPI/sub-04_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:09:25 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:09:25 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:09:25 | INFO | niworkflows | Generating visual report
2025-10-09 23:09:39 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.061168s.
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.279545s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/smoothness/mapflow/_smoothness0".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:09:47 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.278695s.
2025-10-09 23:09:48 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/outliers/mapflow/_outliers0".
2025-10-09 23:09:48 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:09:49 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.773841s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/gcor/mapflow/_gcor0".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:09:51 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.00325s.
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/dilated_mask".
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.01936s.
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.835339s.
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/PlotBrainmask".
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.181439s.
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/final_masked".
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025701s.
2025-10-09 23:10:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f1f28c3362da7f102e4694ca5b687e22da2b272b/ResampleSegmentation".
2025-10-09 23:10:00 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.993483s.
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_norm".
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004177s.
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/measures/mapflow/_measures0".
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.381496s.
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.02177s.
2025-10-09 23:10:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/subtract_mask".
2025-10-09 23:10:06 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:06 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01098s.
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004146s.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_bmask".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004186s.
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/final_masked".
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:09 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025105s.
2025-10-09 23:10:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/585207b44b1c1a7a63cd35215da95f628517d4f9/ResampleSegmentation".
2025-10-09 23:10:10 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:11 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.99175s.
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_norm".
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004094s.
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/measures/mapflow/_measures0".
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:13 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.384847s.
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015594s.
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/subtract_mask".
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01471s.
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004165s.
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_bmask".
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004096s.
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/final_masked".
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:19 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025642s.
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ResampleSegmentation".
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:21 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.976342s.
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_norm".
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004101s.
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/measures/mapflow/_measures0".
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:23 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.369294s.
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.013017s.
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/subtract_mask".
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014917s.
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004231s.
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_bmask".
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004211s.
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/final_masked".
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:29 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025724s.
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ResampleSegmentation".
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:31 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.971066s.
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_norm".
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004218s.
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/measures/mapflow/_measures0".
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:33 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.36784s.
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.010361s.
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/subtract_mask".
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014862s.
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004256s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_bmask".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004063s.
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/final_masked".
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:39 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025594s.
2025-10-09 23:10:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/58a8256503986b599df66acee1a89eed5cb0a9c4/ResampleSegmentation".
2025-10-09 23:10:40 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:41 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.938767s.
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_norm".
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004094s.
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/measures/mapflow/_measures0".
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:43 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.362157s.
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015788s.
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/subtract_mask".
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01188s.
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004229s.
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_bmask".
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004208s.
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0432f16c0ed43aaa496230a503af89f2740239f8/final_masked".
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025419s.
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0432f16c0ed43aaa496230a503af89f2740239f8/ResampleSegmentation".
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:51 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.963283s.
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_norm".
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004178s.
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/measures/mapflow/_measures0".
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.389264s.
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.01114s.
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/subtract_mask".
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010083s.
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00418s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_bmask".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.0041s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/datasink/mapflow/_datasink0".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.00051s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003668s.
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/parcels".
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:59 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017026s.
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/datasink/mapflow/_datasink0".
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000416s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003563s.
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/parcels".
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:01 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020198s.
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/datasink/mapflow/_datasink0".
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000417s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.0036s.
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/parcels".
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:03 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019116s.
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/datasink/mapflow/_datasink0".
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000435s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003529s.
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/parcels".
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017159s.
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/datasink/mapflow/_datasink0".
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000404s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003661s.
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/parcels".
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015543s.
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/datasink/mapflow/_datasink0".
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000428s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0432f16c0ed43aaa496230a503af89f2740239f8/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003497s.
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/parcels".
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.010612s.
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.508521s.
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.443266s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.612813s.
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.516334s.
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:20 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.472058s.
2025-10-09 23:11:20 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:20 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.646951s.
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f1f28c3362da7f102e4694ca5b687e22da2b272b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004108s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/585207b44b1c1a7a63cd35215da95f628517d4f9/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004187s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/a5fe9818919348c874f1451e4375dd6bd5d2ef87/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004037s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cd0ba8fa1e367b9e76fb40100e5bc06951f5e50f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004197s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/58a8256503986b599df66acee1a89eed5cb0a9c4/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003984s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0432f16c0ed43aaa496230a503af89f2740239f8/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004014s.
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:27 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.244462s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.328947s.
2025-10-09 23:11:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:34 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:39 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.275374s.
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/6680be59127e199463cb8000bbe7e84646698fae/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:11:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6680be59127e199463cb8000bbe7e84646698fae/Enhance".
2025-10-09 23:11:42 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:43 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.511671s.
2025-10-09 23:11:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/6680be59127e199463cb8000bbe7e84646698fae/format_tpm_names".
2025-10-09 23:11:44 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:45 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.890998s.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6680be59127e199463cb8000bbe7e84646698fae/Grad".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.330932s.
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6680be59127e199463cb8000bbe7e84646698fae/apply_mask".
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:49 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.200417s.
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/6680be59127e199463cb8000bbe7e84646698fae/GradientThreshold".
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:55 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.234892s.
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/6680be59127e199463cb8000bbe7e84646698fae/segmentation".
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:12:40 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 43.253648s.
2025-10-09 23:12:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/6680be59127e199463cb8000bbe7e84646698fae/ArtifactMask".
2025-10-09 23:12:40 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:12:42 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.3616920000000001s.
2025-10-09 23:12:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotHeadmask".
2025-10-09 23:12:42 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:44 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.006955s.
2025-10-09 23:12:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6680be59127e199463cb8000bbe7e84646698fae/harmonize".
2025-10-09 23:12:46 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:12:47 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.632856s.
2025-10-09 23:12:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotSegmentation".
2025-10-09 23:12:48 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:51 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.256434s.
2025-10-09 23:12:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6680be59127e199463cb8000bbe7e84646698fae/provenance".
2025-10-09 23:12:52 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:12:52 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.041229s.
2025-10-09 23:12:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6680be59127e199463cb8000bbe7e84646698fae/ComputeQI2".
2025-10-09 23:12:53 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:13:03 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.13713s.
2025-10-09 23:13:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotAirmask".
2025-10-09 23:13:04 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:06 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.004864s.
2025-10-09 23:13:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/PlotArtmask".
2025-10-09 23:13:08 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:10 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.010102s.
2025-10-09 23:13:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_headmask".
2025-10-09 23:13:12 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:12 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003901s.
2025-10-09 23:13:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6680be59127e199463cb8000bbe7e84646698fae/measures".
2025-10-09 23:13:13 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:13:17 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.243535s.
2025-10-09 23:13:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_segm".
2025-10-09 23:13:18 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:18 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003919s.
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_noisefit".
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003869s.
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_airmask".
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003776s.
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/6680be59127e199463cb8000bbe7e84646698fae/ds_report_artmask".
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003684s.
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/6680be59127e199463cb8000bbe7e84646698fae/datasink".
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:13:19 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000481s.
2025-10-09 23:13:20 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:13:22 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:13:22 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 14s per subject.
2025-10-09 23:13:22 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 36min 42s).
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