ds000007-mriqc/logs/duct/sub-03_2025.10.10T00.36.30-400727_stdout
Felix Hoffstaedter ac134ef501 [DATALAD RUNCMD] Compute MRIQC for sub-03
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-03 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-03",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:13:27 +02:00

1020 lines
194 KiB (Stored with Git Annex)
Text
Raw Permalink Blame History

This file contains invisible Unicode characters

This file contains invisible Unicode characters that are indistinguishable to humans but may be processed differently by a computer. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_397498/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:31 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:31 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:31 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:32 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:32 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223630_ca014dcd-6e3a-4cff-bcba-ba9b850f06c7.toml.
2025-10-09 22:36:36 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:36 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:37 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:37 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:41 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:45 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/ad3a9c268935199cec8c3191b7304670d2a44552/conform".
2025-10-09 22:36:45 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:45 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.406238s.
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/35cab832d7941f2ed43e260e1587c04d6664b046/pick_echo".
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000242s.
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/provenance/mapflow/_provenance0".
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045114s.
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/pick_echo".
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000122s.
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/provenance/mapflow/_provenance0".
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045303s.
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/pick_echo".
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000127s.
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/provenance/mapflow/_provenance0".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045329s.
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/f137a2b6f51db4698e031afe167a6967bee0d00d/pick_echo".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000119s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/provenance/mapflow/_provenance0".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045353s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/pick_echo".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000113s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/provenance/mapflow/_provenance0".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.044936s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/pick_echo".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/provenance/mapflow/_provenance0".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.045151s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/ad3a9c268935199cec8c3191b7304670d2a44552/pre_clip".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.027145s.
2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/ad3a9c268935199cec8c3191b7304670d2a44552/RotationMask".
2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.4434s.
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotMosaicNoise".
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.026664s.
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/35cab832d7941f2ed43e260e1587c04d6664b046/non_steady_state_detector".
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.166584s.
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/non_steady_state_detector".
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.164439s.
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/non_steady_state_detector".
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.165052s.
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/f137a2b6f51db4698e031afe167a6967bee0d00d/non_steady_state_detector".
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.165862s.
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/non_steady_state_detector".
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.163907s.
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/non_steady_state_detector".
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.163975s.
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/ad3a9c268935199cec8c3191b7304670d2a44552/pre_n4".
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:22 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 52.049682s.
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_background".
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007077s.
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/35cab832d7941f2ed43e260e1587c04d6664b046/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:23 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:24 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.149287s.
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:26 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.15669s.
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.035491s.
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/f137a2b6f51db4698e031afe167a6967bee0d00d/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.035731s.
2025-10-09 22:38:31 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:31 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:31 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.035719s.
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.160013s.
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/ad3a9c268935199cec8c3191b7304670d2a44552/synthstrip".
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.227014s.
2025-10-09 22:39:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/35cab832d7941f2ed43e260e1587c04d6664b046/estimate_hm".
2025-10-09 22:39:15 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:05 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.187581s.
2025-10-09 22:41:07 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:07 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:08 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.258754s.
2025-10-09 22:41:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/estimate_hm".
2025-10-09 22:41:09 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:58 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 108.840154s.
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:59 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:00 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.271817s.
2025-10-09 22:43:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/estimate_hm".
2025-10-09 22:43:01 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:52 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.333924s.
2025-10-09 22:44:53 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:53 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.28299s.
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f137a2b6f51db4698e031afe167a6967bee0d00d/estimate_hm".
2025-10-09 22:44:55 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:44 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.256006s.
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:45 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.274798s.
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/estimate_hm".
2025-10-09 22:46:47 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 109.391693s.
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:37 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.282486s.
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/estimate_hm".
2025-10-09 22:48:39 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:50:30 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 110.415844s.
2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:50:31 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:33 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.277223s.
2025-10-09 22:50:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/ad3a9c268935199cec8c3191b7304670d2a44552/post_n4".
2025-10-09 22:50:33 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:50:46 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 12.387278s.
2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/ad3a9c268935199cec8c3191b7304670d2a44552/smoothness".
2025-10-09 22:50:47 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:50:50 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.443992s.
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotMosaicZoomed".
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.399244s.
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotBrainmask".
2025-10-09 22:50:55 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:50:58 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.387995s.
2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/35cab832d7941f2ed43e260e1587c04d6664b046/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:59 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.829827s.
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/35cab832d7941f2ed43e260e1587c04d6664b046/ComputeFD".
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002216s.
2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:09 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.39016s.
2025-10-09 22:51:11 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:11 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.874243s.
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ComputeFD".
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005428s.
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:21 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.39129s.
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:23 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.944614s.
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ComputeFD".
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:33 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002149s.
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:35 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.399601s.
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f137a2b6f51db4698e031afe167a6967bee0d00d/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:45 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.950538s.
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/f137a2b6f51db4698e031afe167a6967bee0d00d/ComputeFD".
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006136s.
2025-10-09 22:51:49 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:49 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.40105s.
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:51:51 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:59 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.93114s.
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ComputeFD".
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:01 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002123s.
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:03 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.383583s.
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:52:05 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.876274s.
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ComputeFD".
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005041s.
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.370789s.
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/ad3a9c268935199cec8c3191b7304670d2a44552/final_masked".
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.205755s.
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization".
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:52:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:53:09 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:53:09 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:53:21 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:53:22 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:53:22 | INFO | niworkflows | Generating visual report
2025-10-09 22:53:36 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 76.239697s.
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_zoomed".
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003943s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_bmask".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003826s.
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/35cab832d7941f2ed43e260e1587c04d6664b046/mean/mapflow/_mean0".
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:38 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.599263s.
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/35cab832d7941f2ed43e260e1587c04d6664b046/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.406172s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/quality/mapflow/_quality0".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.263912s.
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/mean/mapflow/_mean0".
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.542269s.
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:46 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.408289s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/quality/mapflow/_quality0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.256417s.
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/mean/mapflow/_mean0".
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.545442s.
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b5a554ead4e94c6a1c8703f380b24db6c29dab44/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.411473s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/quality/mapflow/_quality0".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.287638s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/f137a2b6f51db4698e031afe167a6967bee0d00d/mean/mapflow/_mean0".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:53:56 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.5734s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/f137a2b6f51db4698e031afe167a6967bee0d00d/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:53:58 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.441459s.
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/quality/mapflow/_quality0".
2025-10-09 22:53:59 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.275502s.
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/mean/mapflow/_mean0".
2025-10-09 22:54:01 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:02 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.572484s.
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/2f4cd53dbc736d81769a37efa7c6798ab3504f80/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:03 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:04 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.411399s.
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/quality/mapflow/_quality0".
2025-10-09 22:54:05 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.259957s.
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/mean/mapflow/_mean0".
2025-10-09 22:54:07 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:54:08 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.54404s.
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/80977db6f6f0ff13a235aae32da113afbfbf4f8a/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:54:09 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:54:10 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.408908s.
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/quality/mapflow/_quality0".
2025-10-09 22:54:11 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.258342s.
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_norm".
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:54:13 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003878s.
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/pre_clip".
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.22253s.
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/SharpenEPI".
2025-10-09 22:54:15 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:17 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.451708s.
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.788347s.
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.829172s.
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.869274s.
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/pre_clip".
2025-10-09 22:54:23 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.248574s.
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/SharpenEPI".
2025-10-09 22:54:25 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5167920000000001s.
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.823362s.
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:29 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.862942s.
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.876584s.
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/pre_clip".
2025-10-09 22:54:33 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.223194s.
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/SharpenEPI".
2025-10-09 22:54:35 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.510087s.
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:37 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.825167s.
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:39 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.871022s.
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.883385s.
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/pre_clip".
2025-10-09 22:54:43 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.23072s.
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/SharpenEPI".
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.509357s.
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.809394s.
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.872178s.
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:54:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.885826s.
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/pre_clip".
2025-10-09 22:54:53 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:54:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.246506s.
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/SharpenEPI".
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.535623s.
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:54:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.827306s.
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:54:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.877702s.
2025-10-09 22:55:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.886157s.
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/pre_clip".
2025-10-09 22:55:03 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:55:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.235958s.
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/SharpenEPI".
2025-10-09 22:55:05 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.513828s.
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:55:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.837908s.
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:55:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.879582s.
2025-10-09 22:55:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:55:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.867785s.
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/pre_n4".
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:15 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.497918s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.006573s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004463s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004213s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/pre_n4".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.4376120000000001s.
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004116s.
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004128s.
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00414s.
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/pre_n4".
2025-10-09 22:55:18 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.439736s.
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:19 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004141s.
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00413s.
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00422s.
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/pre_n4".
2025-10-09 22:55:20 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.435867s.
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004143s.
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004091s.
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004236s.
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/pre_n4".
2025-10-09 22:55:22 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.431675s.
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004142s.
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004085s.
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004135s.
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/pre_n4".
2025-10-09 22:55:24 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.447559s.
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004123s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004047s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004086s.
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/synthstrip".
2025-10-09 22:55:26 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:59 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.093748s.
2025-10-09 22:56:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/synthstrip".
2025-10-09 22:56:00 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:32 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.925071s.
2025-10-09 22:56:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/synthstrip".
2025-10-09 22:56:34 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:06 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.934031s.
2025-10-09 22:57:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/synthstrip".
2025-10-09 22:57:08 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:57:40 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.943778s.
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/synthstrip".
2025-10-09 22:57:42 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:15 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 32.956265s.
2025-10-09 22:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/synthstrip".
2025-10-09 22:58:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:58:49 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 33.116085s.
2025-10-09 22:58:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/post_n4".
2025-10-09 22:58:50 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:50 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.701058s.
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/EPI2MNI".
2025-10-09 22:58:52 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:58:52 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:12 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/EPI2MNI/stderr.nipype-init).
2025-10-09 22:59:12 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:12 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/SharpenEPI/sub-03_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/SharpenEPI/sub-03_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/SharpenEPI/sub-03_task-stopmanual_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:08 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:08 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:08 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:22 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.240369s.
2025-10-09 23:00:24 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:24 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:28 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.329926s.
2025-10-09 23:00:30 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:30 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:30 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.238818s.
2025-10-09 23:00:32 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/outliers/mapflow/_outliers0".
2025-10-09 23:00:32 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:32 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.788243s.
2025-10-09 23:00:34 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/gcor/mapflow/_gcor0".
2025-10-09 23:00:34 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.112939s.
2025-10-09 23:00:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/dilated_mask".
2025-10-09 23:00:36 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:36 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016032s.
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:00:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.852919s.
2025-10-09 23:00:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/PlotBrainmask".
2025-10-09 23:00:40 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:00:41 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.191381s.
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/post_n4".
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:00:42 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.70902s.
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/EPI2MNI".
2025-10-09 23:00:44 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:00:44 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:04 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:04 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/SharpenEPI/sub-03_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/SharpenEPI/sub-03_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/SharpenEPI/sub-03_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:01 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:15 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.758341s.
2025-10-09 23:02:16 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:16 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:20 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.382073s.
2025-10-09 23:02:22 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:22 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:22 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.243349s.
2025-10-09 23:02:24 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/outliers/mapflow/_outliers0".
2025-10-09 23:02:24 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:24 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.782527s.
2025-10-09 23:02:26 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/gcor/mapflow/_gcor0".
2025-10-09 23:02:26 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:27 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.022254s.
2025-10-09 23:02:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/dilated_mask".
2025-10-09 23:02:28 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:28 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016422s.
2025-10-09 23:02:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:31 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.858656s.
2025-10-09 23:02:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/PlotBrainmask".
2025-10-09 23:02:32 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:33 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.1892179999999999s.
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/post_n4".
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.714041s.
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/EPI2MNI".
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:36 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:02:55 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/EPI2MNI/stderr.nipype-init).
2025-10-09 23:02:55 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:02:55 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/SharpenEPI/sub-03_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/SharpenEPI/sub-03_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/SharpenEPI/sub-03_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:03:51 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:03:51 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:03:51 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:06 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.112802s.
2025-10-09 23:04:08 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:08 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:12 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.319558s.
2025-10-09 23:04:14 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:14 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:14 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.261242s.
2025-10-09 23:04:16 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/outliers/mapflow/_outliers0".
2025-10-09 23:04:16 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:17 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.789785s.
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/gcor/mapflow/_gcor0".
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.02726s.
2025-10-09 23:04:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/dilated_mask".
2025-10-09 23:04:20 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:20 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.017343s.
2025-10-09 23:04:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:23 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.846548s.
2025-10-09 23:04:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/PlotBrainmask".
2025-10-09 23:04:24 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:25 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.193617s.
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/post_n4".
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.739086s.
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/EPI2MNI".
2025-10-09 23:04:28 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:28 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:04:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:04:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/SharpenEPI/sub-03_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/SharpenEPI/sub-03_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/SharpenEPI/sub-03_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:05:45 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:05:45 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:05:45 | INFO | niworkflows | Generating visual report
2025-10-09 23:05:59 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.704494s.
2025-10-09 23:06:00 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:00 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:04 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.368472s.
2025-10-09 23:06:06 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:06 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.265883s.
2025-10-09 23:06:08 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/outliers/mapflow/_outliers0".
2025-10-09 23:06:08 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:09 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.791953s.
2025-10-09 23:06:10 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/gcor/mapflow/_gcor0".
2025-10-09 23:06:10 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.030589s.
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/dilated_mask".
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.011396s.
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.843331s.
2025-10-09 23:06:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/PlotBrainmask".
2025-10-09 23:06:16 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.19324s.
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/post_n4".
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:19 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.741683s.
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/EPI2MNI".
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:06:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:06:41 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/SharpenEPI/sub-03_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/SharpenEPI/sub-03_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/SharpenEPI/sub-03_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:37 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:37 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:37 | INFO | niworkflows | Generating visual report
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.438613s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.337588s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/smoothness/mapflow/_smoothness0".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.272899s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/outliers/mapflow/_outliers0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:08:01 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.783479s.
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/gcor/mapflow/_gcor0".
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:08:03 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.02552s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/dilated_mask".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013413s.
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.859361s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/PlotBrainmask".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:09 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.20051s.
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/post_n4".
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:08:11 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.740843s.
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/EPI2MNI".
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:08:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:08:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:08:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/SharpenEPI/sub-03_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/SharpenEPI/sub-03_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/SharpenEPI/sub-03_task-stopword_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:09:30 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:09:30 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:09:30 | INFO | niworkflows | Generating visual report
2025-10-09 23:09:45 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 92.714179s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.358496s.
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/smoothness/mapflow/_smoothness0".
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.277057s.
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/outliers/mapflow/_outliers0".
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:09:55 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.788821s.
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/gcor/mapflow/_gcor0".
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:09:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.023448s.
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/dilated_mask".
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:09:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016599s.
2025-10-09 23:10:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:10:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:10:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.864691s.
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/PlotBrainmask".
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:10:03 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.202595s.
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/35cab832d7941f2ed43e260e1587c04d6664b046/final_masked".
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025334s.
2025-10-09 23:10:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/35cab832d7941f2ed43e260e1587c04d6664b046/ResampleSegmentation".
2025-10-09 23:10:06 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.99035s.
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_norm".
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004373s.
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/measures/mapflow/_measures0".
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:08 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.383339s.
2025-10-09 23:10:10 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:10 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:10 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.023026s.
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/subtract_mask".
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:12 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014902s.
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004158s.
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_bmask".
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004207s.
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/final_masked".
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:14 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025342s.
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ResampleSegmentation".
2025-10-09 23:10:16 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:17 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.96258s.
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_norm".
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.007222s.
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/measures/mapflow/_measures0".
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:18 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.360901s.
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:20 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.017972s.
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/subtract_mask".
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:22 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014798s.
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004211s.
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_bmask".
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004099s.
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/final_masked".
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025248s.
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ResampleSegmentation".
2025-10-09 23:10:26 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:27 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.960529s.
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_norm".
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004215s.
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/measures/mapflow/_measures0".
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:28 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.389756s.
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:30 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019637s.
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/subtract_mask".
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:32 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008569s.
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004127s.
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_bmask".
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004097s.
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/final_masked".
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025598s.
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/f137a2b6f51db4698e031afe167a6967bee0d00d/ResampleSegmentation".
2025-10-09 23:10:36 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:37 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.950299s.
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_norm".
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004223s.
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/measures/mapflow/_measures0".
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:38 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.363583s.
2025-10-09 23:10:40 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:40 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:40 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011839s.
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/subtract_mask".
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:42 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.01309s.
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004206s.
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_bmask".
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004145s.
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/final_masked".
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:44 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025146s.
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ResampleSegmentation".
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.956616s.
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_norm".
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004261s.
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/measures/mapflow/_measures0".
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.364978s.
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/timeseries/mapflow/_timeseries0".
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022573s.
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/subtract_mask".
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015115s.
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004329s.
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_bmask".
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00413s.
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/final_masked".
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:10:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.025342s.
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ResampleSegmentation".
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:10:57 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.961528s.
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_norm".
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004163s.
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/measures/mapflow/_measures0".
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:10:58 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.388707s.
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/timeseries/mapflow/_timeseries0".
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:11:00 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014744s.
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/subtract_mask".
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:11:02 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012158s.
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004153s.
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_bmask".
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004132s.
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/datasink/mapflow/_datasink0".
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.0005s.
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/35cab832d7941f2ed43e260e1587c04d6664b046/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00376s.
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/parcels".
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:04 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017965s.
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/datasink/mapflow/_datasink0".
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000424s.
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00358s.
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/parcels".
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.020164s.
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/datasink/mapflow/_datasink0".
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000401s.
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003586s.
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/parcels".
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01654s.
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/datasink/mapflow/_datasink0".
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.0004s.
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00359s.
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/parcels".
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016839s.
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/datasink/mapflow/_datasink0".
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000418s.
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003681s.
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/parcels".
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:12 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015335s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/datasink/mapflow/_datasink0".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000412s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00359s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/parcels".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.013839s.
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:16 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:17 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.541841s.
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:18 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:19 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.495852s.
2025-10-09 23:11:20 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:20 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.623461s.
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:22 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:23 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.516262s.
2025-10-09 23:11:24 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:24 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:25 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.477001s.
2025-10-09 23:11:26 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:11:26 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.691096s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/35cab832d7941f2ed43e260e1587c04d6664b046/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004236s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/28c97cb4ea70e8c07a0497548d79ae782d17ab0b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004077s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b5a554ead4e94c6a1c8703f380b24db6c29dab44/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004041s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/f137a2b6f51db4698e031afe167a6967bee0d00d/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004123s.
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f4cd53dbc736d81769a37efa7c6798ab3504f80/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004224s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/80977db6f6f0ff13a235aae32da113afbfbf4f8a/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003921s.
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:29 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:33 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.155536s.
2025-10-09 23:11:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:34 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:38 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.202309s.
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:40 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:11:44 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.169666s.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/ad3a9c268935199cec8c3191b7304670d2a44552/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:11:46 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/ad3a9c268935199cec8c3191b7304670d2a44552/Enhance".
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:48 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.528688s.
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/ad3a9c268935199cec8c3191b7304670d2a44552/format_tpm_names".
2025-10-09 23:11:50 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:51 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.849403s.
2025-10-09 23:11:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/ad3a9c268935199cec8c3191b7304670d2a44552/Grad".
2025-10-09 23:11:52 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:11:53 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.346842s.
2025-10-09 23:11:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/ad3a9c268935199cec8c3191b7304670d2a44552/apply_mask".
2025-10-09 23:11:54 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:11:54 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.20494s.
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/ad3a9c268935199cec8c3191b7304670d2a44552/GradientThreshold".
2025-10-09 23:11:56 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:12:00 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.285333s.
2025-10-09 23:12:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/ad3a9c268935199cec8c3191b7304670d2a44552/segmentation".
2025-10-09 23:12:02 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:12:44 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 41.729939s.
2025-10-09 23:12:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/ad3a9c268935199cec8c3191b7304670d2a44552/ArtifactMask".
2025-10-09 23:12:44 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:12:45 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.34196s.
2025-10-09 23:12:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotHeadmask".
2025-10-09 23:12:46 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:48 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.035083s.
2025-10-09 23:12:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/ad3a9c268935199cec8c3191b7304670d2a44552/harmonize".
2025-10-09 23:12:50 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:12:51 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.629322s.
2025-10-09 23:12:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotSegmentation".
2025-10-09 23:12:52 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:12:54 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.276846s.
2025-10-09 23:12:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/ad3a9c268935199cec8c3191b7304670d2a44552/provenance".
2025-10-09 23:12:56 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:12:56 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.042592s.
2025-10-09 23:12:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/ad3a9c268935199cec8c3191b7304670d2a44552/ComputeQI2".
2025-10-09 23:12:56 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:13:07 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 10.731129s.
2025-10-09 23:13:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotAirmask".
2025-10-09 23:13:08 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:10 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.033033s.
2025-10-09 23:13:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/PlotArtmask".
2025-10-09 23:13:12 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:13:14 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.037547s.
2025-10-09 23:13:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_headmask".
2025-10-09 23:13:16 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:16 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003829s.
2025-10-09 23:13:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/ad3a9c268935199cec8c3191b7304670d2a44552/measures".
2025-10-09 23:13:16 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:13:20 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.260121s.
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_segm".
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003835s.
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_noisefit".
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003788s.
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_airmask".
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.00397s.
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/ad3a9c268935199cec8c3191b7304670d2a44552/ds_report_artmask".
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003887s.
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/ad3a9c268935199cec8c3191b7304670d2a44552/datasink".
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:13:22 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000446s.
2025-10-09 23:13:24 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:13:25 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:13:25 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 05min 16s per subject.
2025-10-09 23:13:25 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 36min 54s).
----------------------------------------------------------------