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ds000007-mriqc/logs/duct/sub-02_2025.10.10T00.36.32-3173050_stdout
Felix Hoffstaedter dad65d6e46 [DATALAD RUNCMD] Compute MRIQC for sub-02 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-02 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-02",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:09:30 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3167587/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:34 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:34 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:34 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:34 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:34 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223633_9fffcba2-b09d-4325-8498-b88f6c7c52a9.toml.
2025-10-09 22:36:38 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:39 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:39 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:40 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:43 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:47 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/2a242346f6bc439da64a15d0b8d733b57e05a4fd/conform".
2025-10-09 22:36:47 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:48 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.345666s.
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/b7bf4382dbd304a288e07b805c8173b83e5ec530/pick_echo".
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:49 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000252s.
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/provenance/mapflow/_provenance0".
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042011s.
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/69e4b1eb16212acda0ad43528c939e06808edb70/pick_echo".
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:51 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/provenance/mapflow/_provenance0".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.041973s.
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/8f3d6731bf29088e492e159f1d10af9c7db5850e/pick_echo".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000134s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/provenance/mapflow/_provenance0".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.041574s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/pick_echo".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000127s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/provenance/mapflow/_provenance0".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.041821s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/0034e0cb5a4523494b3989072839a12864608562/pick_echo".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000121s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/provenance/mapflow/_provenance0".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.041794s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/89ced68a0a266d9be354fa950ab5190dae9fb765/pick_echo".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000116s.
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/provenance/mapflow/_provenance0".
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.042488s.
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/pre_clip".
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.503511s.
2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/2a242346f6bc439da64a15d0b8d733b57e05a4fd/RotationMask".
2025-10-09 22:37:09 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:10 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.406772s.
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotMosaicNoise".
2025-10-09 22:37:11 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.913309s.
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/b7bf4382dbd304a288e07b805c8173b83e5ec530/non_steady_state_detector".
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.144015s.
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/69e4b1eb16212acda0ad43528c939e06808edb70/non_steady_state_detector".
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141093s.
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/8f3d6731bf29088e492e159f1d10af9c7db5850e/non_steady_state_detector".
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:21 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.139763s.
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/non_steady_state_detector".
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.140523s.
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/0034e0cb5a4523494b3989072839a12864608562/non_steady_state_detector".
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.140098s.
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/89ced68a0a266d9be354fa950ab5190dae9fb765/non_steady_state_detector".
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.141325s.
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/pre_n4".
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 55.037089s.
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_background".
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007513s.
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/b7bf4382dbd304a288e07b805c8173b83e5ec530/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:25 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.030049s.
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/69e4b1eb16212acda0ad43528c939e06808edb70/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:27 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:28 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.011147s.
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/8f3d6731bf29088e492e159f1d10af9c7db5850e/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.030787s.
2025-10-09 22:38:31 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:31 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:32 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.980655s.
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/0034e0cb5a4523494b3989072839a12864608562/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:33 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:34 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 1.003138s.
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/89ced68a0a266d9be354fa950ab5190dae9fb765/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.03122s.
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/synthstrip".
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:09 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 31.507219s.
2025-10-09 22:39:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b7bf4382dbd304a288e07b805c8173b83e5ec530/estimate_hm".
2025-10-09 22:39:09 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:40:42 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 92.456605s.
2025-10-09 22:40:43 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:40:43 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:40:44 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.978548s.
2025-10-09 22:40:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/69e4b1eb16212acda0ad43528c939e06808edb70/estimate_hm".
2025-10-09 22:40:45 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:16 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.669204s.
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:17 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:18 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.949307s.
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8f3d6731bf29088e492e159f1d10af9c7db5850e/estimate_hm".
2025-10-09 22:42:19 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 91.792448s.
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:43:51 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:43:52 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.965055s.
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/estimate_hm".
2025-10-09 22:43:53 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:45:24 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.15513s.
2025-10-09 22:45:25 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:45:25 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:45:26 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.966655s.
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0034e0cb5a4523494b3989072839a12864608562/estimate_hm".
2025-10-09 22:45:27 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:58 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.644732s.
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:59 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:00 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.962729s.
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/89ced68a0a266d9be354fa950ab5190dae9fb765/estimate_hm".
2025-10-09 22:47:01 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:48:32 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 90.875451s.
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:48:33 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:48:34 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.955662s.
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/post_n4".
2025-10-09 22:48:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 11.652586s.
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2a242346f6bc439da64a15d0b8d733b57e05a4fd/smoothness".
2025-10-09 22:48:47 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 1.864835s.
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotMosaicZoomed".
2025-10-09 22:48:49 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.052876s.
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotBrainmask".
2025-10-09 22:48:53 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:48:55 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.954372s.
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b7bf4382dbd304a288e07b805c8173b83e5ec530/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:48:57 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.249466s.
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/b7bf4382dbd304a288e07b805c8173b83e5ec530/ComputeFD".
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:05 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001963s.
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:07 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:08 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.330611s.
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/69e4b1eb16212acda0ad43528c939e06808edb70/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:09 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:17 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.1957889999999995s.
2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/69e4b1eb16212acda0ad43528c939e06808edb70/ComputeFD".
2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:18 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.004286s.
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:20 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.335619s.
2025-10-09 22:49:22 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8f3d6731bf29088e492e159f1d10af9c7db5850e/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:22 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:29 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.22047s.
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/8f3d6731bf29088e492e159f1d10af9c7db5850e/ComputeFD".
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:30 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005868s.
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:32 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.354971s.
2025-10-09 22:49:34 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:34 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.206079s.
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ComputeFD".
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:42 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005999s.
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:44 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.336923s.
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0034e0cb5a4523494b3989072839a12864608562/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:46 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.207199s.
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/0034e0cb5a4523494b3989072839a12864608562/ComputeFD".
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:49:54 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005912s.
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:49:56 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.332788s.
2025-10-09 22:49:58 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/89ced68a0a266d9be354fa950ab5190dae9fb765/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:58 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.217659s.
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/89ced68a0a266d9be354fa950ab5190dae9fb765/ComputeFD".
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:06 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.001829s.
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:08 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.333717s.
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/final_masked".
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:50:10 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.180894s.
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization".
2025-10-09 22:50:12 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:50:12 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:50:47 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/stderr.nipype-init).
2025-10-09 22:50:47 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:50:47 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:50:56 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:50:56 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:50:56 | INFO | niworkflows | Generating visual report
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 55.833501s.
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_zoomed".
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003758s.
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_bmask".
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003687s.
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/b7bf4382dbd304a288e07b805c8173b83e5ec530/mean/mapflow/_mean0".
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:08 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.541273s.
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/b7bf4382dbd304a288e07b805c8173b83e5ec530/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:10 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.36719s.
2025-10-09 22:51:12 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/quality/mapflow/_quality0".
2025-10-09 22:51:12 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:13 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.201649s.
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/69e4b1eb16212acda0ad43528c939e06808edb70/mean/mapflow/_mean0".
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:14 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.515853s.
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/69e4b1eb16212acda0ad43528c939e06808edb70/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:16 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.392759s.
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/quality/mapflow/_quality0".
2025-10-09 22:51:18 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:19 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.167941s.
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/8f3d6731bf29088e492e159f1d10af9c7db5850e/mean/mapflow/_mean0".
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:20 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.523461s.
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/8f3d6731bf29088e492e159f1d10af9c7db5850e/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:22 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.383318s.
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/quality/mapflow/_quality0".
2025-10-09 22:51:24 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:25 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.182358s.
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/mean/mapflow/_mean0".
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:26 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.520247s.
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/983d3eac34f6ad7f1dcd141a52c4f39431716dba/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:28 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.365415s.
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/quality/mapflow/_quality0".
2025-10-09 22:51:30 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:31 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.173545s.
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/0034e0cb5a4523494b3989072839a12864608562/mean/mapflow/_mean0".
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:32 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.499955s.
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/0034e0cb5a4523494b3989072839a12864608562/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:34 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.36002s.
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/quality/mapflow/_quality0".
2025-10-09 22:51:36 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:37 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.174987s.
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/89ced68a0a266d9be354fa950ab5190dae9fb765/mean/mapflow/_mean0".
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:51:38 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.507593s.
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/89ced68a0a266d9be354fa950ab5190dae9fb765/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:51:40 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.366857s.
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/quality/mapflow/_quality0".
2025-10-09 22:51:42 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:51:43 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.185142s.
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_norm".
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003809s.
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/pre_clip".
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:51:44 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.211116s.
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/SharpenEPI".
2025-10-09 22:51:46 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:51:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.471689s.
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.771278s.
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.838278s.
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.842863s.
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/pre_clip".
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:51:54 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.230884s.
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/SharpenEPI".
2025-10-09 22:51:56 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:51:57 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5358239999999999s.
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:51:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.793767s.
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.846148s.
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.844637s.
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/pre_clip".
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:04 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.216602s.
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/SharpenEPI".
2025-10-09 22:52:06 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.510557s.
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.796245s.
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.839047s.
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.84669s.
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/pre_clip".
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:14 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.218809s.
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/SharpenEPI".
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.522795s.
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.772822s.
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.820205s.
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.853s.
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/pre_clip".
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.242418s.
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/SharpenEPI".
2025-10-09 22:52:26 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.53467s.
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.802114s.
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.85523s.
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.859287s.
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/pre_clip".
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.224479s.
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/SharpenEPI".
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.5286689999999998s.
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:38 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.810406s.
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.851175s.
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.852555s.
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/pre_n4".
2025-10-09 22:52:44 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.501706s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003981s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004155s.
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/pre_n4".
2025-10-09 22:52:46 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:47 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.45973s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00394s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004029s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004075s.
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/pre_n4".
2025-10-09 22:52:48 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.450645s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004064s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004031s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004099s.
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/pre_n4".
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.445401s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004021s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003946s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004001s.
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/pre_n4".
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.441304s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003946s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.010868s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003954s.
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/pre_n4".
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:55 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.446209s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.003992s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003916s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.008302s.
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/synthstrip".
2025-10-09 22:52:56 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:53:23 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.708814s.
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/synthstrip".
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:53:50 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.678377s.
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/synthstrip".
2025-10-09 22:53:52 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:18 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.79408s.
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/synthstrip".
2025-10-09 22:54:20 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:46 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.738915s.
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/synthstrip".
2025-10-09 22:54:48 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:14 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.703138s.
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/synthstrip".
2025-10-09 22:55:16 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:43 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 26.841895s.
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/post_n4".
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:55:44 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.627052s.
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/EPI2MNI".
2025-10-09 22:55:46 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:55:46 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:56:05 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:56:05 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/SharpenEPI/sub-02_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/SharpenEPI/sub-02_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/SharpenEPI/sub-02_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:57:02 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:57:02 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:57:02 | INFO | niworkflows | Generating visual report
2025-10-09 22:57:13 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.298288s.
2025-10-09 22:57:14 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:57:14 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:57:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.498759s.
2025-10-09 22:57:18 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/smoothness/mapflow/_smoothness0".
2025-10-09 22:57:18 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:57:18 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.214124s.
2025-10-09 22:57:20 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/outliers/mapflow/_outliers0".
2025-10-09 22:57:20 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:57:20 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.677384s.
2025-10-09 22:57:22 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/gcor/mapflow/_gcor0".
2025-10-09 22:57:22 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:57:23 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.161326s.
2025-10-09 22:57:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/dilated_mask".
2025-10-09 22:57:24 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:57:24 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.014525s.
2025-10-09 22:57:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:57:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:57:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.808126s.
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/PlotBrainmask".
2025-10-09 22:57:28 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:57:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.869704s.
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/post_n4".
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:57:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.639147s.
2025-10-09 22:57:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/EPI2MNI".
2025-10-09 22:57:32 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:57:32 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:57:50 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/EPI2MNI/stderr.nipype-init).
2025-10-09 22:57:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:57:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/SharpenEPI/sub-02_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/SharpenEPI/sub-02_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/SharpenEPI/sub-02_task-stopmanual_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:58:50 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:58:50 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:58:50 | INFO | niworkflows | Generating visual report
2025-10-09 22:59:01 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.339206s.
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:59:02 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:59:05 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.501563s.
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/smoothness/mapflow/_smoothness0".
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:59:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.222321s.
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/outliers/mapflow/_outliers0".
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:59:08 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.647781s.
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/gcor/mapflow/_gcor0".
2025-10-09 22:59:10 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:59:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.035615s.
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/dilated_mask".
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:59:12 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.0096s.
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:59:14 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:59:15 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.809395s.
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/PlotBrainmask".
2025-10-09 22:59:16 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:59:17 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.878753s.
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/post_n4".
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:59:18 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.642688s.
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/EPI2MNI".
2025-10-09 22:59:20 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:59:20 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:38 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/EPI2MNI/stderr.nipype-init).
2025-10-09 22:59:38 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:38 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/SharpenEPI/sub-02_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/SharpenEPI/sub-02_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/SharpenEPI/sub-02_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:36 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:36 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:36 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.784672s.
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:48 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:51 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.475271s.
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:52 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.223193s.
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/outliers/mapflow/_outliers0".
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.658365s.
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/gcor/mapflow/_gcor0".
2025-10-09 23:00:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.040423s.
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/dilated_mask".
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015444s.
2025-10-09 23:01:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:01:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:01:01 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.81403s.
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/PlotBrainmask".
2025-10-09 23:01:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:01:03 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.867248s.
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/post_n4".
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:01:04 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.638631s.
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/EPI2MNI".
2025-10-09 23:01:06 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:01:06 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:01:25 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/EPI2MNI/stderr.nipype-init).
2025-10-09 23:01:25 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:01:25 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/SharpenEPI/sub-02_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/SharpenEPI/sub-02_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/SharpenEPI/sub-02_task-stopvocal_run-2_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:02:23 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:02:23 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:02:23 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:34 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 88.683447s.
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:36 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:39 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.5125159999999997s.
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:40 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.216525s.
2025-10-09 23:02:42 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/outliers/mapflow/_outliers0".
2025-10-09 23:02:42 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:42 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.658275s.
2025-10-09 23:02:44 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/gcor/mapflow/_gcor0".
2025-10-09 23:02:44 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:45 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.036363s.
2025-10-09 23:02:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/dilated_mask".
2025-10-09 23:02:46 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:46 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.007207s.
2025-10-09 23:02:48 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:48 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:49 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.816201s.
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/PlotBrainmask".
2025-10-09 23:02:50 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:51 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.862801s.
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/post_n4".
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:52 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.639141s.
2025-10-09 23:02:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/EPI2MNI".
2025-10-09 23:02:54 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:54 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:03:12 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/EPI2MNI/stderr.nipype-init).
2025-10-09 23:03:12 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:03:12 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/SharpenEPI/sub-02_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/SharpenEPI/sub-02_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/SharpenEPI/sub-02_task-stopword_run-1_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:04:14 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:04:14 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:04:14 | INFO | niworkflows | Generating visual report
2025-10-09 23:04:25 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.170984s.
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:04:26 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:29 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.439905s.
2025-10-09 23:04:30 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:30 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:30 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.227152s.
2025-10-09 23:04:32 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/outliers/mapflow/_outliers0".
2025-10-09 23:04:32 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:33 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.651912s.
2025-10-09 23:04:34 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/gcor/mapflow/_gcor0".
2025-10-09 23:04:34 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:35 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.038052s.
2025-10-09 23:04:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/dilated_mask".
2025-10-09 23:04:36 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:36 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015392s.
2025-10-09 23:04:38 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:38 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:39 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.791337s.
2025-10-09 23:04:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/PlotBrainmask".
2025-10-09 23:04:40 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:41 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.844526s.
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/post_n4".
2025-10-09 23:04:42 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:43 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.638858s.
2025-10-09 23:04:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/EPI2MNI".
2025-10-09 23:04:44 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:44 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:05:02 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:05:02 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/SharpenEPI/sub-02_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/SharpenEPI/sub-02_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/SharpenEPI/sub-02_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:06:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:06:01 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:06:01 | INFO | niworkflows | Generating visual report
2025-10-09 23:06:12 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 88.470862s.
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:06:14 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:06:17 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 3.471842s.
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/smoothness/mapflow/_smoothness0".
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:06:18 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.229565s.
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/outliers/mapflow/_outliers0".
2025-10-09 23:06:20 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:21 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.661522s.
2025-10-09 23:06:22 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/gcor/mapflow/_gcor0".
2025-10-09 23:06:22 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:23 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.037938s.
2025-10-09 23:06:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/dilated_mask".
2025-10-09 23:06:24 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:24 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.011639s.
2025-10-09 23:06:26 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:26 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:27 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.78665s.
2025-10-09 23:06:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/PlotBrainmask".
2025-10-09 23:06:28 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.852787s.
2025-10-09 23:06:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/final_masked".
2025-10-09 23:06:30 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:06:30 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022208s.
2025-10-09 23:06:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/b7bf4382dbd304a288e07b805c8173b83e5ec530/ResampleSegmentation".
2025-10-09 23:06:32 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:06:33 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.900346s.
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_norm".
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.006599s.
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/measures/mapflow/_measures0".
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:06:34 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.334939s.
2025-10-09 23:06:36 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/timeseries/mapflow/_timeseries0".
2025-10-09 23:06:36 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:06:36 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018828s.
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/subtract_mask".
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:06:38 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013219s.
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.003913s.
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_bmask".
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003885s.
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/69e4b1eb16212acda0ad43528c939e06808edb70/final_masked".
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:06:40 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.034555s.
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/69e4b1eb16212acda0ad43528c939e06808edb70/ResampleSegmentation".
2025-10-09 23:06:42 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:06:43 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.859138s.
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_norm".
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004046s.
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/measures/mapflow/_measures0".
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:06:44 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.340464s.
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/timeseries/mapflow/_timeseries0".
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:06:46 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011854s.
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/subtract_mask".
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:06:48 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013762s.
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004009s.
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_bmask".
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003889s.
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/final_masked".
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:06:50 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022391s.
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/8f3d6731bf29088e492e159f1d10af9c7db5850e/ResampleSegmentation".
2025-10-09 23:06:52 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:06:53 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.886647s.
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_norm".
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004051s.
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/measures/mapflow/_measures0".
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:06:54 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.323019s.
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/timeseries/mapflow/_timeseries0".
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:06:56 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015609s.
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/subtract_mask".
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:06:58 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012015s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004113s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_bmask".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003917s.
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/final_masked".
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:00 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022391s.
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ResampleSegmentation".
2025-10-09 23:07:02 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:03 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.910046s.
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_norm".
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003911s.
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/measures/mapflow/_measures0".
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:04 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.321174s.
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:06 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016651s.
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/subtract_mask".
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:08 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.014487s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004078s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_bmask".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003934s.
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/0034e0cb5a4523494b3989072839a12864608562/final_masked".
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:10 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022324s.
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/0034e0cb5a4523494b3989072839a12864608562/ResampleSegmentation".
2025-10-09 23:07:12 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:13 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.847437s.
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_norm".
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003895s.
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/measures/mapflow/_measures0".
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:14 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.323295s.
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:16 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015467s.
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/subtract_mask".
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:18 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012686s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004031s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_bmask".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.00395s.
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/final_masked".
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:07:20 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.027573s.
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/89ced68a0a266d9be354fa950ab5190dae9fb765/ResampleSegmentation".
2025-10-09 23:07:22 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:07:23 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.871017s.
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_norm".
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003843s.
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/measures/mapflow/_measures0".
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:07:24 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.339232s.
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/timeseries/mapflow/_timeseries0".
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:07:26 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.006194s.
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/subtract_mask".
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:07:28 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011083s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.00405s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_bmask".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003875s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/datasink/mapflow/_datasink0".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000548s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003863s.
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/parcels".
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:30 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.018739s.
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/datasink/mapflow/_datasink0".
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000425s.
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/69e4b1eb16212acda0ad43528c939e06808edb70/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003506s.
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/parcels".
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:32 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01826s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/datasink/mapflow/_datasink0".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000399s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00368s.
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/parcels".
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:34 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016768s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/datasink/mapflow/_datasink0".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000474s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003564s.
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/parcels".
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:36 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.015582s.
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/datasink/mapflow/_datasink0".
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000408s.
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/0034e0cb5a4523494b3989072839a12864608562/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003553s.
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/parcels".
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:38 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014192s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/datasink/mapflow/_datasink0".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000451s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003502s.
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/parcels".
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:07:40 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.012562s.
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:07:42 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:07:43 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.216047s.
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:07:44 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.178606s.
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:07:47 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.300559s.
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:07:48 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:07:49 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.182761s.
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:07:51 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.207259s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:07:53 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.355353s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/b7bf4382dbd304a288e07b805c8173b83e5ec530/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003909s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/69e4b1eb16212acda0ad43528c939e06808edb70/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003935s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/8f3d6731bf29088e492e159f1d10af9c7db5850e/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004028s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/983d3eac34f6ad7f1dcd141a52c4f39431716dba/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003934s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/0034e0cb5a4523494b3989072839a12864608562/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003854s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/89ced68a0a266d9be354fa950ab5190dae9fb765/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003839s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 3.543951s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 3.620688s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 3.565144s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/2a242346f6bc439da64a15d0b8d733b57e05a4fd/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2a242346f6bc439da64a15d0b8d733b57e05a4fd/Enhance".
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.434078s.
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2a242346f6bc439da64a15d0b8d733b57e05a4fd/format_tpm_names".
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:13 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.73647s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2a242346f6bc439da64a15d0b8d733b57e05a4fd/Grad".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:15 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.008012s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2a242346f6bc439da64a15d0b8d733b57e05a4fd/apply_mask".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.177662s.
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/2a242346f6bc439da64a15d0b8d733b57e05a4fd/GradientThreshold".
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 3.8499309999999998s.
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/2a242346f6bc439da64a15d0b8d733b57e05a4fd/segmentation".
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 34.414139s.
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ArtifactMask".
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:08:59 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.045207s.
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotHeadmask".
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.67515s.
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2a242346f6bc439da64a15d0b8d733b57e05a4fd/harmonize".
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.477771s.
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotSegmentation".
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 1.8420260000000002s.
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2a242346f6bc439da64a15d0b8d733b57e05a4fd/provenance".
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.036298s.
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ComputeQI2".
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:09:15 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 8.774314s.
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotAirmask".
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.6772960000000001s.
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/PlotArtmask".
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.687621s.
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_headmask".
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003616s.
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2a242346f6bc439da64a15d0b8d733b57e05a4fd/measures".
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.239469s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_segm".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003617s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_noisefit".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003713s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_airmask".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003725s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/2a242346f6bc439da64a15d0b8d733b57e05a4fd/ds_report_artmask".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003586s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/2a242346f6bc439da64a15d0b8d733b57e05a4fd/datasink".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00049s.
2025-10-09 23:09:26 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:09:27 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:09:27 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 04min 42s per subject.
2025-10-09 23:09:27 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 32min 54s).
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