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ds000007-mriqc/logs/duct/sub-01_2025.10.10T00.36.37-3899234_stdout
Felix Hoffstaedter f9400c72c4 [DATALAD RUNCMD] Compute MRIQC for sub-01 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-01 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "df548f99-3fd1-4996-bf19-41ab11367f9a",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-01",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-10-10 01:11:19 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_3895166/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-10-09 22:36:39 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-10-09 22:36:39 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-10-09 22:36:39 | IMPORTANT | mriqc | Extracting metadata and entities for 6 input runs of modality 'bold'...
2025-10-09 22:36:39 | IMPORTANT | mriqc | File size ('bold'): 0.03|0.03 GB [maximum|average].
2025-10-09 22:36:39 | INFO | mriqc | MRIQC config file: /tmp/config-20251009-223638_c81e6b06-1318-4f7e-ae75-6477a2c4a1ba.toml.
2025-10-09 22:36:43 | INFO | matplotlib.font_manager | generated new fontManager
2025-10-09 22:36:44 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-10-09 22:36:44 | INFO | nipype.workflow | Building functional MRIQC workflow for 6 BOLD runs..
2025-10-09 22:36:45 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-10-09 22:36:49 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-10-09 22:36:53 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/c61496d0c190176015e8cbc902362588dd368c5c/conform".
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-10-09 22:36:53 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.396904s.
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/2f9679d5117cc8bb1e325712c6e187523f651fea/pick_echo".
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:55 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000246s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/provenance/mapflow/_provenance0".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.047008s.
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/pick_echo".
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:57 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000128s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/provenance/mapflow/_provenance0".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04691s.
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/pick_echo".
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:36:59 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000139s.
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/provenance/mapflow/_provenance0".
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046846s.
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/pick_echo".
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:01 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000128s.
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/provenance/mapflow/_provenance0".
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04686s.
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/73b570ff117d6659c34dd9a50e97209b694ed461/pick_echo".
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:03 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000117s.
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/provenance/mapflow/_provenance0".
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.04692s.
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/pick_echo".
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-10-09 22:37:05 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000119s.
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/provenance/mapflow/_provenance0".
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.046976s.
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/c61496d0c190176015e8cbc902362588dd368c5c/pre_clip".
2025-10-09 22:37:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:37:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 8.218744s.
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/c61496d0c190176015e8cbc902362588dd368c5c/RotationMask".
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-10-09 22:37:17 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.404753s.
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotMosaicNoise".
2025-10-09 22:37:19 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:37:23 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.134245s.
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/2f9679d5117cc8bb1e325712c6e187523f651fea/non_steady_state_detector".
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.186716s.
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/non_steady_state_detector".
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.157941s.
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/non_steady_state_detector".
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:29 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159661s.
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/non_steady_state_detector".
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:31 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159685s.
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/73b570ff117d6659c34dd9a50e97209b694ed461/non_steady_state_detector".
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:33 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.159145s.
2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/non_steady_state_detector".
2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-10-09 22:37:35 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.160003s.
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/c61496d0c190176015e8cbc902362588dd368c5c/pre_n4".
2025-10-09 22:37:37 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 57.576305s.
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_background".
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.007485s.
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/2f9679d5117cc8bb1e325712c6e187523f651fea/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:35 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034028s.
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:37 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.03497s.
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:39 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.041436s.
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:41 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034887s.
2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/73b570ff117d6659c34dd9a50e97209b694ed461/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:43 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034886s.
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/sanitize/mapflow/_sanitize0".
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-10-09 22:38:45 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.034741s.
2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/c61496d0c190176015e8cbc902362588dd368c5c/synthstrip".
2025-10-09 22:38:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:39:26 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 39.190862s.
2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2f9679d5117cc8bb1e325712c6e187523f651fea/estimate_hm".
2025-10-09 22:39:27 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:41:02 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 95.566835s.
2025-10-09 22:41:03 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:41:03 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:41:04 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.013141s.
2025-10-09 22:41:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/estimate_hm".
2025-10-09 22:41:05 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 97.759765s.
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:42:43 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:42:44 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.99169s.
2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/estimate_hm".
2025-10-09 22:42:45 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 97.772033s.
2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:44:23 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:44:24 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.999387s.
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/estimate_hm".
2025-10-09 22:44:25 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:46:02 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 97.466969s.
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:46:03 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:46:04 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.974643s.
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/73b570ff117d6659c34dd9a50e97209b694ed461/estimate_hm".
2025-10-09 22:46:05 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:47:42 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 96.648505s.
2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:47:43 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:47:44 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.983851s.
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/estimate_hm".
2025-10-09 22:47:45 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-10-09 22:49:22 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 97.358255s.
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/SpikesMask/mapflow/_SpikesMask0".
2025-10-09 22:49:23 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:49:24 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 0.981435s.
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/c61496d0c190176015e8cbc902362588dd368c5c/post_n4".
2025-10-09 22:49:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:49:39 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.009059s.
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/c61496d0c190176015e8cbc902362588dd368c5c/smoothness".
2025-10-09 22:49:41 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:49:43 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.450336s.
2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotMosaicZoomed".
2025-10-09 22:49:45 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:49:48 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.446643s.
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotBrainmask".
2025-10-09 22:49:49 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:49:51 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.040553s.
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2f9679d5117cc8bb1e325712c6e187523f651fea/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:49:53 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.722185s.
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2f9679d5117cc8bb1e325712c6e187523f651fea/ComputeFD".
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:01 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005866s.
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:03 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.381327s.
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:05 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.743945s.
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ComputeFD".
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:13 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.00194s.
2025-10-09 22:50:15 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:15 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:15 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.386547s.
2025-10-09 22:50:17 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:17 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:25 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.714283s.
2025-10-09 22:50:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ComputeFD".
2025-10-09 22:50:25 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:25 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005959s.
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:27 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.362685s.
2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:29 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.707428s.
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ComputeFD".
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:37 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005958s.
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:39 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.361098s.
2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/73b570ff117d6659c34dd9a50e97209b694ed461/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:41 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.719448s.
2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/73b570ff117d6659c34dd9a50e97209b694ed461/ComputeFD".
2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:50:49 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.002586s.
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:50:51 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.361166s.
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/apply_hmc/mapflow/_apply_hmc0".
2025-10-09 22:50:53 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 7.719956s.
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ComputeFD".
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-10-09 22:51:01 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005985s.
2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-10-09 22:51:03 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-10-09 22:51:04 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.361005s.
2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/c61496d0c190176015e8cbc902362588dd368c5c/final_masked".
2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 22:51:05 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.200308s.
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization".
2025-10-09 22:51:07 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:51:08 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:51:45 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-10-09 22:51:45 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:51:55 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:51:55 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-10-09 22:51:55 | INFO | niworkflows | Generating visual report
2025-10-09 22:52:07 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 60.110907s.
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_zoomed".
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004253s.
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_bmask".
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004205s.
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/2f9679d5117cc8bb1e325712c6e187523f651fea/mean/mapflow/_mean0".
2025-10-09 22:52:09 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:10 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.610279s.
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/2f9679d5117cc8bb1e325712c6e187523f651fea/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:11 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:12 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.399317s.
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/quality/mapflow/_quality0".
2025-10-09 22:52:13 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.373222s.
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/mean/mapflow/_mean0".
2025-10-09 22:52:15 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:16 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.539883s.
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:17 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:18 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.400368s.
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/quality/mapflow/_quality0".
2025-10-09 22:52:19 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.33522s.
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/mean/mapflow/_mean0".
2025-10-09 22:52:21 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:22 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.541143s.
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5771014e253f2cb90657cc0fc767aa96f8ff4c34/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:23 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:24 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.399099s.
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/quality/mapflow/_quality0".
2025-10-09 22:52:25 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.331016s.
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/mean/mapflow/_mean0".
2025-10-09 22:52:27 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:28 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.544144s.
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:29 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.395611s.
2025-10-09 22:52:31 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/quality/mapflow/_quality0".
2025-10-09 22:52:31 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.3367499999999999s.
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/73b570ff117d6659c34dd9a50e97209b694ed461/mean/mapflow/_mean0".
2025-10-09 22:52:33 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:34 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.562676s.
2025-10-09 22:52:35 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/73b570ff117d6659c34dd9a50e97209b694ed461/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:35 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:36 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.422719s.
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/quality/mapflow/_quality0".
2025-10-09 22:52:37 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.368141s.
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/mean/mapflow/_mean0".
2025-10-09 22:52:39 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-10-09 22:52:40 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.571662s.
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/compute_tsnr/mapflow/_compute_tsnr0".
2025-10-09 22:52:41 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-10-09 22:52:42 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.422073s.
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/quality/mapflow/_quality0".
2025-10-09 22:52:43 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 1.335822s.
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_norm".
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003918s.
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/pre_clip".
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:45 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.222372s.
2025-10-09 22:52:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/SharpenEPI".
2025-10-09 22:52:47 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.530018s.
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.849079s.
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:52:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.891718s.
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:52:53 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:52:54 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.897399s.
2025-10-09 22:52:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/pre_clip".
2025-10-09 22:52:55 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:52:55 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.224956s.
2025-10-09 22:52:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/SharpenEPI".
2025-10-09 22:52:57 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.587235s.
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:52:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.82257s.
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.896293s.
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:03 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:04 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.900742s.
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/pre_clip".
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:05 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.251007s.
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/SharpenEPI".
2025-10-09 22:53:07 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.613356s.
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.856081s.
2025-10-09 22:53:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.896591s.
2025-10-09 22:53:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.905811s.
2025-10-09 22:53:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/pre_clip".
2025-10-09 22:53:15 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.230678s.
2025-10-09 22:53:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/SharpenEPI".
2025-10-09 22:53:17 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:19 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.592345s.
2025-10-09 22:53:19 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:19 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.844905s.
2025-10-09 22:53:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.892163s.
2025-10-09 22:53:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.906197s.
2025-10-09 22:53:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/pre_clip".
2025-10-09 22:53:25 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:25 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.227331s.
2025-10-09 22:53:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/SharpenEPI".
2025-10-09 22:53:27 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:29 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.590273s.
2025-10-09 22:53:29 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:29 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:30 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.835754s.
2025-10-09 22:53:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.900642s.
2025-10-09 22:53:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.905565s.
2025-10-09 22:53:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/pre_clip".
2025-10-09 22:53:35 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-10-09 22:53:35 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.257636s.
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/SharpenEPI".
2025-10-09 22:53:37 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.619427s.
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-10-09 22:53:39 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:40 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.862156s.
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-10-09 22:53:41 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:42 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.904856s.
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-10-09 22:53:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:53:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.911343s.
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/pre_n4".
2025-10-09 22:53:45 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.590482s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004244s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004397s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004173s.
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/pre_n4".
2025-10-09 22:53:47 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.553887s.
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004382s.
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004213s.
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004258s.
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/pre_n4".
2025-10-09 22:53:49 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.527262s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004263s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004243s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004365s.
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/pre_n4".
2025-10-09 22:53:51 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.517598s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004239s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004225s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004184s.
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/pre_n4".
2025-10-09 22:53:53 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.5158930000000002s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004414s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004357s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004359s.
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/pre_n4".
2025-10-09 22:53:55 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.516187s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_mean/mapflow/_ds_report_mean0".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004363s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_background/mapflow/_ds_report_background0".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004327s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004168s.
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/synthstrip".
2025-10-09 22:53:57 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:26 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 28.0631s.
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/synthstrip".
2025-10-09 22:54:27 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:54:55 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 28.170595s.
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/synthstrip".
2025-10-09 22:54:57 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:25 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 28.177833s.
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/synthstrip".
2025-10-09 22:55:27 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:55:55 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 28.112808s.
2025-10-09 22:55:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/synthstrip".
2025-10-09 22:55:57 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:25 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 28.074546s.
2025-10-09 22:56:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/synthstrip".
2025-10-09 22:56:27 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-10-09 22:56:55 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 28.03219s.
2025-10-09 22:56:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/post_n4".
2025-10-09 22:56:57 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:56:58 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.729936s.
2025-10-09 22:56:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/EPI2MNI".
2025-10-09 22:56:59 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:56:59 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:57:18 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:57:18 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/SharpenEPI/sub-01_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/SharpenEPI/sub-01_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/SharpenEPI/sub-01_task-stopmanual_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 22:58:17 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 22:58:17 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 22:58:17 | INFO | niworkflows | Generating visual report
2025-10-09 22:58:29 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.930907s.
2025-10-09 22:58:29 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 22:58:29 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 22:58:34 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.644839s.
2025-10-09 22:58:35 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/smoothness/mapflow/_smoothness0".
2025-10-09 22:58:35 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 22:58:36 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.273396s.
2025-10-09 22:58:37 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/outliers/mapflow/_outliers0".
2025-10-09 22:58:37 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 22:58:38 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.820152s.
2025-10-09 22:58:39 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/gcor/mapflow/_gcor0".
2025-10-09 22:58:39 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 22:58:41 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.254148s.
2025-10-09 22:58:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/dilated_mask".
2025-10-09 22:58:41 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 22:58:41 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015319s.
2025-10-09 22:58:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 22:58:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 22:58:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.841529s.
2025-10-09 22:58:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/PlotBrainmask".
2025-10-09 22:58:45 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 22:58:46 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.886675s.
2025-10-09 22:58:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/post_n4".
2025-10-09 22:58:47 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 22:58:48 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.756771s.
2025-10-09 22:58:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/EPI2MNI".
2025-10-09 22:58:49 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 22:58:49 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 22:59:06 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 22:59:06 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/SharpenEPI/sub-01_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/SharpenEPI/sub-01_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/SharpenEPI/sub-01_task-stopmanual_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:00:05 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:00:05 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:00:05 | INFO | niworkflows | Generating visual report
2025-10-09 23:00:16 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 87.065734s.
2025-10-09 23:00:17 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:00:17 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:00:22 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.527641s.
2025-10-09 23:00:23 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/smoothness/mapflow/_smoothness0".
2025-10-09 23:00:23 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:00:24 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.248264s.
2025-10-09 23:00:25 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/outliers/mapflow/_outliers0".
2025-10-09 23:00:25 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:00:26 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.790088s.
2025-10-09 23:00:27 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/gcor/mapflow/_gcor0".
2025-10-09 23:00:27 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:00:28 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.11141s.
2025-10-09 23:00:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/dilated_mask".
2025-10-09 23:00:29 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:00:29 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015414s.
2025-10-09 23:00:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:00:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:00:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.823509s.
2025-10-09 23:00:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/PlotBrainmask".
2025-10-09 23:00:33 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:00:34 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.860566s.
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/post_n4".
2025-10-09 23:00:35 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:00:36 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.764471s.
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/EPI2MNI".
2025-10-09 23:00:37 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:00:37 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:00:56 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:00:56 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/SharpenEPI/sub-01_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/SharpenEPI/sub-01_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/SharpenEPI/sub-01_task-stopvocal_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:01:56 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:01:56 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:01:56 | INFO | niworkflows | Generating visual report
2025-10-09 23:02:08 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 90.338041s.
2025-10-09 23:02:09 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:02:09 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:02:14 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.547077s.
2025-10-09 23:02:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/smoothness/mapflow/_smoothness0".
2025-10-09 23:02:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:02:16 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.249387s.
2025-10-09 23:02:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/outliers/mapflow/_outliers0".
2025-10-09 23:02:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:02:18 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.76887s.
2025-10-09 23:02:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/gcor/mapflow/_gcor0".
2025-10-09 23:02:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:02:21 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.120404s.
2025-10-09 23:02:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/dilated_mask".
2025-10-09 23:02:21 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:02:21 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013659s.
2025-10-09 23:02:23 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:02:23 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:02:24 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.847189s.
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/PlotBrainmask".
2025-10-09 23:02:25 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:02:26 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.885455s.
2025-10-09 23:02:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/post_n4".
2025-10-09 23:02:27 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:02:28 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.734053s.
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/EPI2MNI".
2025-10-09 23:02:29 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:02:29 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:02:47 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/EPI2MNI/stderr.nipype-init).
2025-10-09 23:02:47 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:02:47 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/SharpenEPI/sub-01_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/SharpenEPI/sub-01_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/SharpenEPI/sub-01_task-stopvocal_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:03:47 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:03:47 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:03:47 | INFO | niworkflows | Generating visual report
2025-10-09 23:03:59 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 89.888738s.
2025-10-09 23:03:59 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:03:59 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:04:04 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.567357s.
2025-10-09 23:04:05 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/smoothness/mapflow/_smoothness0".
2025-10-09 23:04:05 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:04:06 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.273369s.
2025-10-09 23:04:07 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/outliers/mapflow/_outliers0".
2025-10-09 23:04:07 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:04:08 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.762218s.
2025-10-09 23:04:09 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/gcor/mapflow/_gcor0".
2025-10-09 23:04:09 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:04:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.115918s.
2025-10-09 23:04:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/dilated_mask".
2025-10-09 23:04:11 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:04:11 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016821s.
2025-10-09 23:04:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:04:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:04:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.829126s.
2025-10-09 23:04:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/PlotBrainmask".
2025-10-09 23:04:15 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:04:16 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.891908s.
2025-10-09 23:04:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/post_n4".
2025-10-09 23:04:17 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:04:18 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.760984s.
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/EPI2MNI".
2025-10-09 23:04:19 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:04:19 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:04:38 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/EPI2MNI/stderr.nipype-init).
2025-10-09 23:04:38 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:04:38 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/SharpenEPI/sub-01_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/SharpenEPI/sub-01_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/SharpenEPI/sub-01_task-stopword_run-1_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:05:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:05:39 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:05:39 | INFO | niworkflows | Generating visual report
2025-10-09 23:05:51 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.149832s.
2025-10-09 23:05:51 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:05:51 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:05:56 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.531562s.
2025-10-09 23:05:57 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/smoothness/mapflow/_smoothness0".
2025-10-09 23:05:57 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:05:58 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.264951s.
2025-10-09 23:05:59 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/outliers/mapflow/_outliers0".
2025-10-09 23:05:59 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:06:00 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.780482s.
2025-10-09 23:06:01 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/gcor/mapflow/_gcor0".
2025-10-09 23:06:01 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:06:03 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.114318s.
2025-10-09 23:06:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/dilated_mask".
2025-10-09 23:06:03 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:06:03 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013627s.
2025-10-09 23:06:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:06:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:06:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.830046s.
2025-10-09 23:06:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/PlotBrainmask".
2025-10-09 23:06:07 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:06:08 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.89996s.
2025-10-09 23:06:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/post_n4".
2025-10-09 23:06:09 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-10-09 23:06:10 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.756321s.
2025-10-09 23:06:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/EPI2MNI".
2025-10-09 23:06:11 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-10-09 23:06:11 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-10-09 23:06:30 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/EPI2MNI/stderr.nipype-init).
2025-10-09 23:06:30 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-10-09 23:06:30 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/SharpenEPI/sub-01_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/SharpenEPI/sub-01_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/SharpenEPI/sub-01_task-stopword_run-2_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-10-09 23:07:33 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-10-09 23:07:33 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-10-09 23:07:33 | INFO | niworkflows | Generating visual report
2025-10-09 23:07:45 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 93.204501s.
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-10-09 23:07:46 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-10-09 23:07:50 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 4.529054s.
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/smoothness/mapflow/_smoothness0".
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-10-09 23:07:52 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.241291s.
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/outliers/mapflow/_outliers0".
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-10-09 23:07:54 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 0.744027s.
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/gcor/mapflow/_gcor0".
2025-10-09 23:07:56 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-10-09 23:07:57 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.139406s.
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/dilated_mask".
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-10-09 23:07:58 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015376s.
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-10-09 23:08:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.830852s.
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/PlotBrainmask".
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:08:02 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 0.896745s.
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/final_masked".
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:04 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024052s.
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2f9679d5117cc8bb1e325712c6e187523f651fea/ResampleSegmentation".
2025-10-09 23:08:06 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:07 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.022265s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_norm".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004167s.
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/measures/mapflow/_measures0".
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:08 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.390152s.
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:10 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019378s.
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/subtract_mask".
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:12 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012479s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004343s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_bmask".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004144s.
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/final_masked".
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:14 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02413s.
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ResampleSegmentation".
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:16 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.964719s.
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_norm".
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004184s.
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/measures/mapflow/_measures0".
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:18 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.349803s.
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:20 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.011926s.
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/subtract_mask".
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:22 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.008872s.
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004371s.
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_bmask".
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004232s.
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/final_masked".
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.024251s.
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ResampleSegmentation".
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:26 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.971505s.
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_norm".
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00421s.
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/measures/mapflow/_measures0".
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:28 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.350664s.
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:30 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.012491s.
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/subtract_mask".
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:32 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.00896s.
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004484s.
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_bmask".
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004577s.
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/final_masked".
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02118s.
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ResampleSegmentation".
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:36 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.965893s.
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_norm".
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004327s.
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/measures/mapflow/_measures0".
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:38 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.375492s.
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:40 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.014464s.
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/subtract_mask".
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:42 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012203s.
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004452s.
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_bmask".
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004157s.
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/73b570ff117d6659c34dd9a50e97209b694ed461/final_masked".
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:44 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023978s.
2025-10-09 23:08:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/73b570ff117d6659c34dd9a50e97209b694ed461/ResampleSegmentation".
2025-10-09 23:08:46 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:46 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.964853s.
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_norm".
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004353s.
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/measures/mapflow/_measures0".
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:48 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.351312s.
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/timeseries/mapflow/_timeseries0".
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:08:50 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.0196s.
2025-10-09 23:08:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/subtract_mask".
2025-10-09 23:08:52 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:08:52 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009973s.
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004304s.
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_bmask".
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004277s.
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/final_masked".
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:08:54 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.020906s.
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ResampleSegmentation".
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-10-09 23:08:56 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.968659s.
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_norm".
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004217s.
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/measures/mapflow/_measures0".
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-10-09 23:08:58 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.352991s.
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/timeseries/mapflow/_timeseries0".
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-10-09 23:09:00 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.009816s.
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/subtract_mask".
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-10-09 23:09:02 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.009682s.
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004414s.
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_bmask".
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004332s.
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/datasink/mapflow/_datasink0".
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.0006s.
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003932s.
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/parcels".
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:04 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019351s.
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/datasink/mapflow/_datasink0".
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000467s.
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003752s.
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/parcels".
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:06 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.019081s.
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/datasink/mapflow/_datasink0".
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000444s.
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003874s.
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/parcels".
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:08 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017917s.
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/datasink/mapflow/_datasink0".
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000441s.
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003761s.
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/parcels".
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:10 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016253s.
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/datasink/mapflow/_datasink0".
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000439s.
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/73b570ff117d6659c34dd9a50e97209b694ed461/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003757s.
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/parcels".
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:12 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014534s.
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/datasink/mapflow/_datasink0".
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000444s.
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_timeseries/mapflow/_ds_timeseries0".
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003793s.
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/parcels".
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:14 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.011163s.
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:16 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:17 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.383178s.
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:18 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:19 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.202394s.
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:20 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:21 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.403228s.
2025-10-09 23:09:22 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:22 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:23 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.270232s.
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:24 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:25 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.286189s.
2025-10-09 23:09:26 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/BigPlot/mapflow/_BigPlot0".
2025-10-09 23:09:26 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-10-09 23:09:27 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 1.444802s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2f9679d5117cc8bb1e325712c6e187523f651fea/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00434s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/ab3a0680d83d6e1cf6311b41f8973cea47f9010b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004208s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5771014e253f2cb90657cc0fc767aa96f8ff4c34/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00427s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/2d3808a1f6cd8b38d2433d7e76c1969deb42da5f/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004215s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/73b570ff117d6659c34dd9a50e97209b694ed461/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004186s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/6cfa5a3fe618ab8c08daedd6f0ff345624a05724/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004143s.
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:09:28 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:09:32 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.341777s.
2025-10-09 23:09:34 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:09:34 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:09:38 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.347979s.
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:09:40 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-10-09 23:09:44 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.347096s.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/c61496d0c190176015e8cbc902362588dd368c5c/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-10-09 23:09:46 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-10-09 23:09:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/c61496d0c190176015e8cbc902362588dd368c5c/Enhance".
2025-10-09 23:09:48 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:48 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.474878s.
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/c61496d0c190176015e8cbc902362588dd368c5c/format_tpm_names".
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:50 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.899447s.
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/c61496d0c190176015e8cbc902362588dd368c5c/Grad".
2025-10-09 23:09:52 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:09:53 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.060825s.
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/c61496d0c190176015e8cbc902362588dd368c5c/apply_mask".
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-10-09 23:09:54 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.19348s.
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/c61496d0c190176015e8cbc902362588dd368c5c/GradientThreshold".
2025-10-09 23:09:56 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-10-09 23:10:00 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.125673s.
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/c61496d0c190176015e8cbc902362588dd368c5c/segmentation".
2025-10-09 23:10:02 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-10-09 23:10:45 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 43.222083s.
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/c61496d0c190176015e8cbc902362588dd368c5c/ArtifactMask".
2025-10-09 23:10:46 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-10-09 23:10:47 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.089849s.
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotHeadmask".
2025-10-09 23:10:48 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:10:49 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.729634s.
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/c61496d0c190176015e8cbc902362588dd368c5c/harmonize".
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-10-09 23:10:50 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.52866s.
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotSegmentation".
2025-10-09 23:10:52 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:10:53 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 1.942643s.
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/c61496d0c190176015e8cbc902362588dd368c5c/provenance".
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.043492s.
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/c61496d0c190176015e8cbc902362588dd368c5c/ComputeQI2".
2025-10-09 23:10:56 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-10-09 23:11:05 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 8.967632s.
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotAirmask".
2025-10-09 23:11:06 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:07 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.721323s.
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/PlotArtmask".
2025-10-09 23:11:08 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-10-09 23:11:09 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.709819s.
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_headmask".
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003999s.
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/c61496d0c190176015e8cbc902362588dd368c5c/measures".
2025-10-09 23:11:10 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-10-09 23:11:13 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 3.414548s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_segm".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003988s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_noisefit".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003816s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_airmask".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003979s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/c61496d0c190176015e8cbc902362588dd368c5c/ds_report_artmask".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003787s.
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/c61496d0c190176015e8cbc902362588dd368c5c/datasink".
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-10-09 23:11:14 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000519s.
2025-10-09 23:11:16 | INFO | nipype.workflow | Generating reports...
2025-10-09 23:11:17 | INFO | nipype.workflow | Report generation finished (7 reports).
2025-10-09 23:11:17 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 04min 57s per subject.
2025-10-09 23:11:17 | INFO | mriqc | Generating BIDS derivatives metadata.
----------------------------------------------------------------
MRIQC completed (elapsed time 00h 34min 39s).
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